AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0467900

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0467900 MtrunA17_Chr3g0122431 97.535 284 2 1 1 279 86 369 0.0 570
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0467900 AT1G67325.1 68.858 289 78 5 1 279 1 287 6.60e-134 383
Msa0467900 AT1G67325.2 68.621 290 78 6 1 279 1 288 5.66e-132 378

Find 236 sgRNAs with CRISPR-Local

Find 412 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TCAGGGATTGCATTAATATT+TGG 0.093690 3_3:-69388051 None:intergenic
TTGGAAACTTCAATTGTTTA+TGG 0.130184 3_3:-69386900 None:intergenic
CCCTATGAGGTTCCATTTAC+TGG 0.167642 3_3:+69384697 Msa0467900:CDS
TCAGGGATTCTATACATATT+TGG 0.168181 3_3:-69387470 None:intergenic
GCAATGTCAATTTCTCTTTC+AGG 0.172921 3_3:+69383948 Msa0467900:CDS
AAATTGACGTTACCACATTT+TGG 0.177028 3_3:-69385827 None:intergenic
TCTCTTAAAATAAATTATTT+AGG 0.192159 3_3:-69387572 None:intergenic
CAGGGATTCTATACATATTT+GGG 0.211681 3_3:-69387469 None:intergenic
TATATTGGTGCCCCACCTTA+TGG 0.213371 3_3:+69384646 Msa0467900:CDS
CACATTGTCTTGTATATCTT+TGG 0.217293 3_3:+69387703 Msa0467900:three_prime_UTR
GATTAGCACTCCCGGTATTC+AGG 0.237229 3_3:-69387488 None:intergenic
CTCTTATGCTTCCTGTCATT+TGG 0.241291 3_3:+69386470 Msa0467900:CDS
GCATACCTGGGATCCGGGTT+TGG 0.243357 3_3:-69385891 None:intergenic
ACTTTGGTGCCTTTGGTCTT+TGG 0.254708 3_3:+69387518 Msa0467900:three_prime_UTR
CGATGACAAGTCTCAGAAAA+AGG 0.257099 3_3:+69385676 Msa0467900:CDS
TGTGATGATACAAGTAATTC+AGG 0.261226 3_3:-69388069 None:intergenic
AATAATTAATGATGTCAAAT+AGG 0.268957 3_3:+69387366 Msa0467900:three_prime_UTR
CAGGGATTGCATTAATATTT+GGG 0.282427 3_3:-69388050 None:intergenic
GTGAACACCTTATGAATAAA+AGG 0.283154 3_3:-69388189 None:intergenic
TCATTGGCACTTGGTGCTTT+TGG 0.285846 3_3:-69387814 None:intergenic
GAAATTGACATTGCCGCAAC+TGG 0.289903 3_3:-69383939 None:intergenic
TATTAACTGAGATGGTATTT+TGG 0.292017 3_3:+69386738 Msa0467900:three_prime_UTR
AATCTTTGTGAGTGCTTTGT+TGG 0.292454 3_3:+69387187 Msa0467900:three_prime_UTR
AATCTTTGTGAGTGCTTTGT+TGG 0.292454 3_3:+69387228 Msa0467900:three_prime_UTR
GGTGGAGAGAGAAGAGAGAT+AGG 0.307163 3_3:-69387551 None:intergenic
TCTTCCAGCATTGCTCAGTT+TGG 0.312615 3_3:+69386631 Msa0467900:three_prime_UTR
GTCCAGCCATTTCTCGTCAT+TGG 0.313193 3_3:-69388331 None:intergenic
TAGGCTGATCCTCCAGTAAA+TGG 0.316077 3_3:-69384709 None:intergenic
CACATTGTCTTGTATACCTT+TGG 0.316373 3_3:-69387637 None:intergenic
CAGCGTTGTAAAAGAGGCTT+TGG 0.319360 3_3:-69388573 None:intergenic
GTGCTTTGTTGGGTCCATAC+TGG 0.320851 3_3:+69387198 Msa0467900:three_prime_UTR
GGATTTCACTTTGGTGCCTT+TGG 0.324797 3_3:+69387511 Msa0467900:three_prime_UTR
CTTCCAGCATTGCTCAGTTT+GGG 0.326844 3_3:+69386632 Msa0467900:three_prime_UTR
ATATGCCATGCCCCAGCTAT+TGG 0.331863 3_3:+69385097 Msa0467900:CDS
TCCAGCCATTTCTCGTCATT+GGG 0.333409 3_3:-69388330 None:intergenic
ATATTGGTGCCCCACCTTAT+GGG 0.333502 3_3:+69384647 Msa0467900:CDS
TTGTTGCACTTTGGTCTTGA+AGG 0.335707 3_3:+69388305 Msa0467900:three_prime_UTR
CCTTATGGGTCTTTATTCAA+TGG 0.342244 3_3:+69384661 Msa0467900:CDS
TGCCTTTGCAGGTTGATAAC+AGG 0.342807 3_3:+69383440 Msa0467900:intron
TATGGCCTCGGTGTCCCTAT+TGG 0.344398 3_3:+69385125 Msa0467900:CDS
CATACCTGGGATCCGGGTTT+GGG 0.368855 3_3:-69385890 None:intergenic
TCTGTCTGTTGCACTTGGTT+CGG 0.369594 3_3:-69386225 None:intergenic
ATGCAACTCGTGACAATGAT+TGG 0.373547 3_3:+69385798 Msa0467900:CDS
GGGGCGTTGGAGCCTAAATA+AGG 0.374623 3_3:-69384613 None:intergenic
TTTATTGTTGCAACAGAGAT+TGG 0.375131 3_3:+69386354 Msa0467900:CDS
ATATTTCACTTGGGTGTCAT+TGG 0.375214 3_3:-69387830 None:intergenic
CATTAATATTTGGGAACTAC+AGG 0.379401 3_3:-69388041 None:intergenic
TCTGGCATAAAGATTGTTGC+AGG 0.380709 3_3:+69386801 Msa0467900:three_prime_UTR
AAAGATTAGCCCGCCCAGTA+TGG 0.383695 3_3:-69387212 None:intergenic
GTTATTTGAACATCCACTTT+GGG 0.384950 3_3:-69387742 None:intergenic
ATTATTATATTAGACAAATC+AGG 0.385571 3_3:-69388491 None:intergenic
GGTGCAGTTACGCATATTGC+AGG 0.385655 3_3:-69383975 None:intergenic
ACCAAAAGGAAACTTAAAAC+TGG 0.389800 3_3:-69386826 None:intergenic
ATAAGGAGCTGCGGATGAAT+AGG 0.393530 3_3:-69384596 None:intergenic
TCATCCGCAGCTCCTTATTT+AGG 0.393685 3_3:+69384601 Msa0467900:CDS
ACCATTGCTCCAGGTCCAAT+AGG 0.396253 3_3:-69385140 None:intergenic
TACATATTTGGGGCCTATAC+AGG 0.398538 3_3:-69387458 None:intergenic
TCCAGTAAATGGAACCTCAT+AGG 0.398572 3_3:-69384698 None:intergenic
ATCTTTGTGAGTGCTTTGTT+GGG 0.402925 3_3:+69387188 Msa0467900:three_prime_UTR
ATCTTTGTGAGTGCTTTGTT+GGG 0.402925 3_3:+69387229 Msa0467900:three_prime_UTR
GCTAGATGTAATGGTCTATA+CGG 0.404926 3_3:-69384769 None:intergenic
ACACAATGGGAAACAGAATA+TGG 0.407375 3_3:-69387294 None:intergenic
GGCCATAGCGATCCAATAGC+TGG 0.408792 3_3:-69385109 None:intergenic
GGAGAGTTAAAATGCACTCT+TGG 0.418979 3_3:+69387411 Msa0467900:three_prime_UTR
ATAATCAAATAATGCTTCTC+AGG 0.421215 3_3:-69388103 None:intergenic
TACTTGCACTTTACCTGTAT+AGG 0.423645 3_3:+69387445 Msa0467900:three_prime_UTR
GAATTATGATCAGCAGGCCT+TGG 0.428440 3_3:-69384001 None:intergenic
CCTTAGCAGGGCACTAGGCC+AGG 0.428460 3_3:+69385644 Msa0467900:intron
ATCTCCAGATCAAAATGAAC+AGG 0.432251 3_3:+69386294 Msa0467900:CDS
ACATAGATTAGCACTCAGTA+TGG 0.435641 3_3:-69387253 None:intergenic
CCAGTAAATGGAACCTCATA+GGG 0.438911 3_3:-69384697 None:intergenic
ATGTGCGTGATGAGATCATT+GGG 0.442949 3_3:-69388368 None:intergenic
ATCCACTTTGGGACAACTTG+TGG 0.446314 3_3:-69387731 None:intergenic
TTATCCCATACCATTGCTCC+AGG 0.446633 3_3:-69385149 None:intergenic
TGCTTTGTTGGGTCCATACT+GGG 0.446821 3_3:+69387199 Msa0467900:three_prime_UTR
TGTTATTTGAACATCCACTT+TGG 0.447233 3_3:-69387743 None:intergenic
CTCGGTGTCCCTATTGGACC+TGG 0.447427 3_3:+69385131 Msa0467900:CDS
TCGATTAATAAATCAATTCA+AGG 0.450386 3_3:+69388152 Msa0467900:three_prime_UTR
TATGATCAGCAGGCCTTGGT+TGG 0.450863 3_3:-69383997 None:intergenic
ACACCCAAACTGAGCAATGC+TGG 0.457221 3_3:-69386635 None:intergenic
CTGTTGCACTTGGTTCGGAA+TGG 0.457553 3_3:-69386220 None:intergenic
TCCACTTTGGGACAACTTGT+GGG 0.458577 3_3:-69387730 None:intergenic
ACAATTCTGTCTGTTGCACT+TGG 0.460673 3_3:-69386230 None:intergenic
CCCGCTCGAGAAGTAGTAGA+AGG 0.460836 3_3:+69383072 Msa0467900:five_prime_UTR
AGGTCCCCAATGACGAGAAA+TGG 0.460959 3_3:+69388325 Msa0467900:three_prime_UTR
CCCATTGTGTCGCTGACATA+CGG 0.463003 3_3:+69387307 Msa0467900:three_prime_UTR
AAGGCAGCATACCTGGGATC+CGG 0.463801 3_3:-69385897 None:intergenic
TGAATACCGGGAGTGCTAAT+CGG 0.466600 3_3:+69387490 Msa0467900:three_prime_UTR
CTATTGGATCGCTATGGCCT+CGG 0.466850 3_3:+69385113 Msa0467900:CDS
AGCAGTGACTCGAAAGTAAA+CGG 0.468841 3_3:-69387024 None:intergenic
GCTCCACTGGTGTATGGTGC+TGG 0.469100 3_3:-69384796 None:intergenic
CCATTGCTCCAGGTCCAATA+GGG 0.469970 3_3:-69385139 None:intergenic
TCAGCCTATCAGTACAGTTA+TGG 0.471174 3_3:+69384724 Msa0467900:CDS
CCTCATATTGTATGCTTCAA+AGG 0.474076 3_3:-69388535 None:intergenic
TATTTCAGATTAGAGAATGA+TGG 0.474670 3_3:-69387789 None:intergenic
GCTGGTCCTGCTAGATGTAA+TGG 0.476031 3_3:-69384778 None:intergenic
TGTATAGAATCCCTGAATAC+CGG 0.479233 3_3:+69387477 Msa0467900:three_prime_UTR
TGAAGGTTAGCAAATTGAAA+AGG 0.481784 3_3:-69386331 None:intergenic
ACTTGGGTGTCATTGGCACT+TGG 0.483585 3_3:-69387823 None:intergenic
TGTTGCACTTGGTTCGGAAT+GGG 0.484091 3_3:-69386219 None:intergenic
GAGAGTTAAAATGCACTCTT+GGG 0.485117 3_3:+69387412 Msa0467900:three_prime_UTR
GTGTCCAACCACGGCTCCAC+TGG 0.485675 3_3:-69384809 None:intergenic
AGAAGTCACTTGTTGCACTT+TGG 0.486330 3_3:+69388296 Msa0467900:three_prime_UTR
AAAAGATGCCGGAGGGAAGC+TGG 0.486610 3_3:+69386167 Msa0467900:CDS
AGGCTATGCCGATTGTAGTC+AGG 0.489272 3_3:-69388471 None:intergenic
ATTAGCACTCCCGGTATTCA+GGG 0.489411 3_3:-69387487 None:intergenic
GCTTCCATAACTGTACTGAT+AGG 0.490302 3_3:-69384728 None:intergenic
AAATTAGCACATATTTCACT+TGG 0.490788 3_3:-69387840 None:intergenic
AGTGTTCTTATCAGACTTTG+AGG 0.491350 3_3:-69386037 None:intergenic
ATTTGTTGTATTAACTGAGA+TGG 0.495787 3_3:+69386730 Msa0467900:three_prime_UTR
ACCACGGCTCCACTGGTGTA+TGG 0.498513 3_3:-69384802 None:intergenic
GCATTAAGCCTGACTACAAT+CGG 0.499049 3_3:+69388463 Msa0467900:three_prime_UTR
AAATAATGCTTCTCAGGAGA+AGG 0.502308 3_3:-69388097 None:intergenic
GTAGCCGCAGGGAAGATGAT+TGG 0.502761 3_3:+69383909 Msa0467900:CDS
TGCAACTCGTGACAATGATT+GGG 0.502973 3_3:+69385799 Msa0467900:CDS
AGTCCTGGCACGCTTGGCAG+CGG 0.503501 3_3:-69383470 None:intergenic
CCTTGCCTTAGCAGGGCACT+AGG 0.504169 3_3:+69385639 Msa0467900:intron
ATGATCAGCAGGCCTTGGTT+GGG 0.505822 3_3:-69383996 None:intergenic
ATCAAGCAGCGTTGTAAAAG+AGG 0.506512 3_3:-69388579 None:intergenic
ACTGCTCACCGTCATGTCTC+AGG 0.507462 3_3:+69383135 Msa0467900:exon
TCACACTTCCAGCTTCCCTC+CGG 0.511245 3_3:-69386175 None:intergenic
CTTAAAATAAATTATTTAGG+TGG 0.511278 3_3:-69387569 None:intergenic
TTGTTGGGTCCATACTGGGC+GGG 0.511402 3_3:+69387203 Msa0467900:three_prime_UTR
GAAGCCTCTTCAAGCTCCAC+AGG 0.514671 3_3:+69384573 Msa0467900:CDS
TAATAATTCTTCGCTTACAT+TGG 0.515160 3_3:+69387666 Msa0467900:three_prime_UTR
AGCACCCAGCTGATGATACT+AGG 0.515926 3_3:+69387150 Msa0467900:three_prime_UTR
AGTTGTACTTAAAATGCAAA+AGG 0.516641 3_3:-69386862 None:intergenic
CCTTTGAAGCATACAATATG+AGG 0.516739 3_3:+69388535 Msa0467900:three_prime_UTR
CACACCCAAACCCGGATCCC+AGG 0.518215 3_3:+69385886 Msa0467900:CDS
TATGGAAGCCGTGTTCCTGC+TGG 0.519467 3_3:+69384742 Msa0467900:CDS
CTTACAGAATTATGATCAGC+AGG 0.520212 3_3:-69384007 None:intergenic
CCGTATGTCAGCGACACAAT+GGG 0.520822 3_3:-69387307 None:intergenic
GGGGCACCAATATAAATTGA+AGG 0.521368 3_3:-69384637 None:intergenic
CACCAATATAAATTGAAGGG+GGG 0.525042 3_3:-69384633 None:intergenic
AAACATGTCTTAGTACTCAC+TGG 0.526208 3_3:-69386584 None:intergenic
GCACCAATATAAATTGAAGG+GGG 0.526551 3_3:-69384634 None:intergenic
CGATTAATAAATCAATTCAA+GGG 0.526714 3_3:+69388153 Msa0467900:three_prime_UTR
CCCTATTGGACCTGGAGCAA+TGG 0.527038 3_3:+69385139 Msa0467900:CDS
TCTGTTGCAACAATAAATGA+AGG 0.531007 3_3:-69386348 None:intergenic
AACAAAAGAATCCAAATGAC+AGG 0.531789 3_3:-69386481 None:intergenic
GTGCTAATCGGATTTCACTT+TGG 0.532546 3_3:+69387502 Msa0467900:three_prime_UTR
ACTAATGATATCATGAAGGC+TGG 0.534368 3_3:+69387959 Msa0467900:three_prime_UTR
GAGTACTAAGACATGTTTGA+GGG 0.535687 3_3:+69386589 Msa0467900:three_prime_UTR
GTAAACGGTTTCTGTGATGC+TGG 0.537957 3_3:-69387009 None:intergenic
GCCATAGCGATCCAATAGCT+GGG 0.538615 3_3:-69385108 None:intergenic
TAATGTCAGTGGTGCGCAGT+AGG 0.540797 3_3:-69387888 None:intergenic
CGTCAGCCGTGTCAATTACA+TGG 0.541836 3_3:+69387390 Msa0467900:three_prime_UTR
AATGTGCGTGATGAGATCAT+TGG 0.543408 3_3:-69388369 None:intergenic
AGGCAGCATACCTGGGATCC+GGG 0.543582 3_3:-69385896 None:intergenic
TGCTGACAAGCCAGCTGAGT+CGG 0.544079 3_3:+69386255 Msa0467900:CDS
GGCACCAATATAAATTGAAG+GGG 0.544339 3_3:-69384635 None:intergenic
CCTTCTACTACTTCTCGAGC+GGG 0.546466 3_3:-69383072 None:intergenic
TACACCAGTGGAGCCGTGGT+TGG 0.547754 3_3:+69384805 Msa0467900:CDS
GACATGTTTGAGGGTTGAGA+AGG 0.548962 3_3:+69386598 Msa0467900:three_prime_UTR
GTGATGATACAAGTAATTCA+GGG 0.549108 3_3:-69388068 None:intergenic
AAGGTTCTACAGAAGTTGCA+TGG 0.549750 3_3:-69388516 None:intergenic
TGAAATCCGATTAGCACTCC+CGG 0.550185 3_3:-69387496 None:intergenic
CCCCAATGACGAGAAATGGC+TGG 0.550326 3_3:+69388329 Msa0467900:three_prime_UTR
AGCGTTGTAAAAGAGGCTTT+GGG 0.552565 3_3:-69388572 None:intergenic
GGTCTATACGGACTGCCAGC+AGG 0.556407 3_3:-69384757 None:intergenic
ATTAATATTTGGGAACTACA+GGG 0.562175 3_3:-69388040 None:intergenic
TGAATAAAGACCCATAAGGT+GGG 0.565119 3_3:-69384657 None:intergenic
GTGAGCAGTGAGTGCTGCGA+GGG 0.566332 3_3:-69383121 None:intergenic
CCAATCAGAGCAAAAGATGC+CGG 0.573203 3_3:+69386156 Msa0467900:intron
TATAGACCATTACATCTAGC+AGG 0.573249 3_3:+69384772 Msa0467900:CDS
AATAATGCTTCTCAGGAGAA+GGG 0.575356 3_3:-69388096 None:intergenic
AACTCTCCATGTAATTGACA+CGG 0.577372 3_3:-69387396 None:intergenic
CCCCAGCTATTGGATCGCTA+TGG 0.578680 3_3:+69385107 Msa0467900:CDS
ACCAATATAAATTGAAGGGG+GGG 0.578819 3_3:-69384632 None:intergenic
TCCTTCTACTACTTCTCGAG+CGG 0.579714 3_3:-69383073 None:intergenic
AATTAGCACATATTTCACTT+GGG 0.580031 3_3:-69387839 None:intergenic
TTGAATAAAGACCCATAAGG+TGG 0.582236 3_3:-69384658 None:intergenic
GGGAATTACCTGAGACATGA+CGG 0.584892 3_3:-69383143 None:intergenic
TCCCACAAGTTGTCCCAAAG+TGG 0.587065 3_3:+69387729 Msa0467900:three_prime_UTR
TTGCACATTAAATATAGCAA+TGG 0.587511 3_3:-69386549 None:intergenic
GTATAGAATCCCTGAATACC+GGG 0.591508 3_3:+69387478 Msa0467900:three_prime_UTR
ACAACTTATGGGACAACCAA+AGG 0.595636 3_3:+69387621 Msa0467900:three_prime_UTR
GCCGTATGTCAGCGACACAA+TGG 0.595821 3_3:-69387308 None:intergenic
AGGTACAAAGGAAATAAACT+AGG 0.596332 3_3:-69386524 None:intergenic
GCGATCCAATAGCTGGGGCA+TGG 0.596562 3_3:-69385102 None:intergenic
GCAGACAGTTCAGAACCAAA+AGG 0.598611 3_3:-69386840 None:intergenic
AAATGCAACACACCCAAACC+CGG 0.600952 3_3:+69385878 Msa0467900:CDS
AATAACTAATGATATCATGA+AGG 0.601885 3_3:+69387955 Msa0467900:three_prime_UTR
TGACAACTTCTGCAACATAG+AGG 0.601965 3_3:-69386678 None:intergenic
GATTGGACATGTCCCAGTTG+CGG 0.602850 3_3:+69383926 Msa0467900:CDS
TTAATATTTGGGAACTACAG+GGG 0.607180 3_3:-69388039 None:intergenic
CATGTAATTGACACGGCTGA+CGG 0.608977 3_3:-69387389 None:intergenic
CATTAAATATAGCAATGGAT+AGG 0.608999 3_3:-69386544 None:intergenic
CCAGCCATTTCTCGTCATTG+GGG 0.609743 3_3:-69388329 None:intergenic
AAAACCTAGTATCATCAGCT+GGG 0.611109 3_3:-69387154 None:intergenic
GCATACATGCTAAAAGTGGT+AGG 0.611149 3_3:-69386985 None:intergenic
AGGGATTCTATACATATTTG+GGG 0.611454 3_3:-69387468 None:intergenic
GCAATGCTGGAAGACAACTC+TGG 0.612472 3_3:-69386622 None:intergenic
TAGGCCTGTGGAGCTTGAAG+AGG 0.613687 3_3:-69384577 None:intergenic
ACCATACACCAGTGGAGCCG+TGG 0.614260 3_3:+69384801 Msa0467900:CDS
ACAAAGACACCAAAGACCAA+AGG 0.614639 3_3:-69387527 None:intergenic
TGACACATATTATGAGAAGG+TGG 0.618244 3_3:-69386707 None:intergenic
CCATTGAATAAAGACCCATA+AGG 0.619596 3_3:-69384661 None:intergenic
AAATTGACATTGCCGCAACT+GGG 0.619691 3_3:-69383938 None:intergenic
ATAGCAATGGATAGGTACAA+AGG 0.623067 3_3:-69386536 None:intergenic
TTTGTTGGGTCCATACTGGG+CGG 0.624051 3_3:+69387202 Msa0467900:three_prime_UTR
TATGAGGTTCCATTTACTGG+AGG 0.626370 3_3:+69384700 Msa0467900:CDS
GGGCACCAATATAAATTGAA+GGG 0.630466 3_3:-69384636 None:intergenic
GATTAATAAATCAATTCAAG+GGG 0.631670 3_3:+69388154 Msa0467900:three_prime_UTR
AGTGGAGCCGTGGTTGGACA+CGG 0.632225 3_3:+69384811 Msa0467900:CDS
GAACATACCGTGTCCAACCA+CGG 0.632372 3_3:-69384818 None:intergenic
GACACATATTATGAGAAGGT+GGG 0.633114 3_3:-69386706 None:intergenic
GAATAAAGACCCATAAGGTG+GGG 0.636716 3_3:-69384656 None:intergenic
TGGCGCATACATGCTAAAAG+TGG 0.637624 3_3:-69386989 None:intergenic
TGAGTACTAAGACATGTTTG+AGG 0.639687 3_3:+69386588 Msa0467900:three_prime_UTR
TGCGTAACTGCACCCAACCA+AGG 0.643014 3_3:+69383984 Msa0467900:CDS
AATTGACACATATTATGAGA+AGG 0.643568 3_3:-69386710 None:intergenic
TTGAAAAGAAATGAAGAACT+CGG 0.646566 3_3:+69388260 Msa0467900:three_prime_UTR
CAGTAAATGGAACCTCATAG+GGG 0.648620 3_3:-69384696 None:intergenic
TTGACTCATGTAATTGACAC+AGG 0.652301 3_3:-69387984 None:intergenic
CTACTACTTCTCGAGCGGGG+CGG 0.658678 3_3:-69383068 None:intergenic
TCAGAGCAAAAGATGCCGGA+GGG 0.658717 3_3:+69386160 Msa0467900:intron
ATCAGAGCAAAAGATGCCGG+AGG 0.659983 3_3:+69386159 Msa0467900:intron
AGTAAATGGAACCTCATAGG+GGG 0.661420 3_3:-69384695 None:intergenic
CCATAGCGATCCAATAGCTG+GGG 0.661975 3_3:-69385107 None:intergenic
GGAGCCTAAATAAGGAGCTG+CGG 0.664165 3_3:-69384605 None:intergenic
CAAAGGTATACAAGACAATG+TGG 0.665722 3_3:+69387638 Msa0467900:three_prime_UTR
TTTGTTTGTAGGTAGCCGCA+GGG 0.666364 3_3:+69383898 Msa0467900:intron
ACGGACTGCCAGCAGGAACA+CGG 0.673399 3_3:-69384750 None:intergenic
AAGTGCAACAGACAGAATTG+TGG 0.680252 3_3:+69386232 Msa0467900:CDS
GCTGCGGATGAATAGGCCTG+TGG 0.686536 3_3:-69384589 None:intergenic
GTAAATGGAACCTCATAGGG+GGG 0.695701 3_3:-69384694 None:intergenic
CTTCTACTACTTCTCGAGCG+GGG 0.700067 3_3:-69383071 None:intergenic
GGACCAGCACCATACACCAG+TGG 0.704235 3_3:+69384793 Msa0467900:CDS
GATTGGGCTTGTCCAAAATG+TGG 0.706309 3_3:+69385815 Msa0467900:CDS
ATGTCCAATCATCTTCCCTG+CGG 0.718395 3_3:-69383913 None:intergenic
GGTGAGCAGTGAGTGCTGCG+AGG 0.733204 3_3:-69383122 None:intergenic
TAGTTGAATCGTAATGTCAG+TGG 0.738018 3_3:-69387899 None:intergenic
CAGGTCCAATAGGGACACCG+AGG 0.741060 3_3:-69385130 None:intergenic
AAAAGAAATGAAGAACTCGG+CGG 0.753436 3_3:+69388263 Msa0467900:three_prime_UTR
TGTGCGTGATGAGATCATTG+GGG 0.785071 3_3:-69388367 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! ATTGAATTTAATATAGTTTA+AGG + chr3_3:69383569-69383588 Msa0467900:intron 10.0%
!! AAAAACATAATTAAAAATAG+AGG - chr3_3:69384166-69384185 None:intergenic 10.0%
!! TCTCTTAAAATAAATTATTT+AGG - chr3_3:69387575-69387594 None:intergenic 10.0%
!! AAGTTTATATAGTAAAAATT+TGG + chr3_3:69387924-69387943 Msa0467900:three_prime_UTR 10.0%
!!! TTAAATTTGTTTTTGTTTGT+AGG + chr3_3:69383887-69383906 Msa0467900:intron 15.0%
!! AACATTGAATATAAACATAT+TGG - chr3_3:69384040-69384059 None:intergenic 15.0%
!!! GTTTTTTTTGTGATATATAA+AGG + chr3_3:69384080-69384099 Msa0467900:intron 15.0%
!! ATAAGAATATAAAACAATAG+AGG + chr3_3:69384326-69384345 Msa0467900:intron 15.0%
!!! TAATTTTTTCTGATTAATGA+AGG + chr3_3:69384945-69384964 Msa0467900:intron 15.0%
!! AAATTTAACATAACTGTAAT+AGG - chr3_3:69385048-69385067 None:intergenic 15.0%
!!! AGTTATGTTAAATTTTTTGT+TGG + chr3_3:69385053-69385072 Msa0467900:intron 15.0%
!!! GATATTTTTTCTTGTTTTAT+TGG + chr3_3:69385333-69385352 Msa0467900:intron 15.0%
!! AAGAAAGTTTAGTTAAAAAT+TGG + chr3_3:69387335-69387354 Msa0467900:three_prime_UTR 15.0%
!! AATAATTAATGATGTCAAAT+AGG + chr3_3:69387366-69387385 Msa0467900:three_prime_UTR 15.0%
!! CTTAAAATAAATTATTTAGG+TGG - chr3_3:69387572-69387591 None:intergenic 15.0%
!!! TCAAATTTTTATTCATCAAT+AGG + chr3_3:69388407-69388426 Msa0467900:three_prime_UTR 15.0%
!! ATTATTATATTAGACAAATC+AGG - chr3_3:69388494-69388513 None:intergenic 15.0%
!!! TAAGATTCCAATTTTTTCAT+CGG - chr3_3:69383409-69383428 None:intergenic 20.0%
!! ATAAGATTCCTTAAAACAAA+TGG - chr3_3:69383508-69383527 None:intergenic 20.0%
!! AAAAACAAATTTAAATGCAC+CGG - chr3_3:69383881-69383900 None:intergenic 20.0%
!! ATTTAATGTGTCAATCAATT+GGG - chr3_3:69384244-69384263 None:intergenic 20.0%
!! AATTTAATGTGTCAATCAAT+TGG - chr3_3:69384245-69384264 None:intergenic 20.0%
!! ATTGATTGACACATTAAATT+AGG + chr3_3:69384245-69384264 Msa0467900:intron 20.0%
!! TTGATTGACACATTAAATTA+GGG + chr3_3:69384246-69384265 Msa0467900:intron 20.0%
!! GGAAAAAAAAGTAAGTTTAT+AGG - chr3_3:69384511-69384530 None:intergenic 20.0%
!! TTAATGAAGGAAAATATTCA+AGG + chr3_3:69384958-69384977 Msa0467900:intron 20.0%
!! AATAGGATTATATCTACAAA+AGG - chr3_3:69385031-69385050 None:intergenic 20.0%
!!! ATTTTTTGTTGGTGATTATT+TGG + chr3_3:69385064-69385083 Msa0467900:intron 20.0%
!!! GATTATTTAAAACTTTTGTC+AGG + chr3_3:69385184-69385203 Msa0467900:intron 20.0%
!!! CAGCATTTTTTTAAAAACAA+TGG - chr3_3:69385386-69385405 None:intergenic 20.0%
!! TTTAAAAAAATGCTGTATTC+TGG + chr3_3:69385391-69385410 Msa0467900:intron 20.0%
!! TTATATGCATGCAAAATTTA+TGG - chr3_3:69385495-69385514 None:intergenic 20.0%
!! ATGTATTAAGAAACTTCAAT+TGG - chr3_3:69385744-69385763 None:intergenic 20.0%
!! AATCTACATAATAGATATGA+AGG - chr3_3:69385919-69385938 None:intergenic 20.0%
!!! TGGCTAATATTTTAAATTGT+TGG + chr3_3:69385993-69386012 Msa0467900:intron 20.0%
!! TATGATATAAATACAACAGT+TGG + chr3_3:69386105-69386124 Msa0467900:intron 20.0%
!! AATAACTAATGATATCATGA+AGG + chr3_3:69387955-69387974 Msa0467900:three_prime_UTR 20.0%
!! TCGATTAATAAATCAATTCA+AGG + chr3_3:69388152-69388171 Msa0467900:three_prime_UTR 20.0%
!! CGATTAATAAATCAATTCAA+GGG + chr3_3:69388153-69388172 Msa0467900:three_prime_UTR 20.0%
!! GATTAATAAATCAATTCAAG+GGG + chr3_3:69388154-69388173 Msa0467900:three_prime_UTR 20.0%
!!! TTAGATTCCTTTTATTCATA+AGG + chr3_3:69388182-69388201 Msa0467900:three_prime_UTR 20.0%
! ACATTCAGAAAAAGCTTAAT+TGG - chr3_3:69383291-69383310 None:intergenic 25.0%
! AACTTCGACATTAATCAAAT+TGG - chr3_3:69383343-69383362 None:intergenic 25.0%
!!! AAGATTCCAATTTTTTCATC+GGG - chr3_3:69383408-69383427 None:intergenic 25.0%
!!! TTTTAAGGAATCTTATCCAT+AGG + chr3_3:69383512-69383531 Msa0467900:intron 25.0%
! ATTTAAGAGAGTGATAGTTT+AGG + chr3_3:69383597-69383616 Msa0467900:intron 25.0%
! TTTAAGAGAGTGATAGTTTA+GGG + chr3_3:69383598-69383617 Msa0467900:intron 25.0%
!! TTTTATGTCTCTGTTATCTA+TGG + chr3_3:69383645-69383664 Msa0467900:intron 25.0%
! ATTAAAAATAGAGGAAACAG+AGG - chr3_3:69384157-69384176 None:intergenic 25.0%
! ATATAAAACAATAGAGGTCA+CGG + chr3_3:69384332-69384351 Msa0467900:intron 25.0%
! AAAAAGTAAGTTTATAGGAG+AGG - chr3_3:69384506-69384525 None:intergenic 25.0%
! AAAAACCATATGTGAAACTA+TGG - chr3_3:69385526-69385545 None:intergenic 25.0%
!! ATTGCCATTTCAGATTATTA+GGG - chr3_3:69385559-69385578 None:intergenic 25.0%
!! TATTGCCATTTCAGATTATT+AGG - chr3_3:69385560-69385579 None:intergenic 25.0%
! CATTAAATATAGCAATGGAT+AGG - chr3_3:69386547-69386566 None:intergenic 25.0%
! TTGCACATTAAATATAGCAA+TGG - chr3_3:69386552-69386571 None:intergenic 25.0%
! AATTGACACATATTATGAGA+AGG - chr3_3:69386713-69386732 None:intergenic 25.0%
!!! ATTTGTTGTATTAACTGAGA+TGG + chr3_3:69386730-69386749 Msa0467900:three_prime_UTR 25.0%
!! TATTAACTGAGATGGTATTT+TGG + chr3_3:69386738-69386757 Msa0467900:three_prime_UTR 25.0%
! AGTTGTACTTAAAATGCAAA+AGG - chr3_3:69386865-69386884 None:intergenic 25.0%
! TTGGAAACTTCAATTGTTTA+TGG - chr3_3:69386903-69386922 None:intergenic 25.0%
! CTGAATAATCTAAAAACACT+TGG - chr3_3:69386922-69386941 None:intergenic 25.0%
!!! CAAGTGTTTTTAGATTATTC+AGG + chr3_3:69386920-69386939 Msa0467900:three_prime_UTR 25.0%
!! CCATTAAAAAAATCTAGGAT+TGG - chr3_3:69387118-69387137 None:intergenic 25.0%
!!! CCAATCCTAGATTTTTTTAA+TGG + chr3_3:69387115-69387134 Msa0467900:three_prime_UTR 25.0%
! CATGACCATTAAAAAAATCT+AGG - chr3_3:69387123-69387142 None:intergenic 25.0%
! TAATAATTCTTCGCTTACAT+TGG + chr3_3:69387666-69387685 Msa0467900:three_prime_UTR 25.0%
! TATTTCAGATTAGAGAATGA+TGG - chr3_3:69387792-69387811 None:intergenic 25.0%
! AATTAGCACATATTTCACTT+GGG - chr3_3:69387842-69387861 None:intergenic 25.0%
! AAATTAGCACATATTTCACT+TGG - chr3_3:69387843-69387862 None:intergenic 25.0%
! ATTAATATTTGGGAACTACA+GGG - chr3_3:69388043-69388062 None:intergenic 25.0%
! ATAATCAAATAATGCTTCTC+AGG - chr3_3:69388106-69388125 None:intergenic 25.0%
! TTGAAAAGAAATGAAGAACT+CGG + chr3_3:69388260-69388279 Msa0467900:three_prime_UTR 25.0%
GAAACGAGATCGATTAATTA+GGG - chr3_3:69383204-69383223 None:intergenic 30.0%
AGAAACGAGATCGATTAATT+AGG - chr3_3:69383205-69383224 None:intergenic 30.0%
AATTGACAAAACCCTAATTG+AGG - chr3_3:69383232-69383251 None:intergenic 30.0%
AAGCTTAATTGGATCGAATT+GGG - chr3_3:69383280-69383299 None:intergenic 30.0%
AAAGCTTAATTGGATCGAAT+TGG - chr3_3:69383281-69383300 None:intergenic 30.0%
!!! AGATTCCAATTTTTTCATCG+GGG - chr3_3:69383407-69383426 None:intergenic 30.0%
!!! GTTCGTTACCATTTGTTTTA+AGG + chr3_3:69383497-69383516 Msa0467900:intron 30.0%
!! ATCTTATCCATAGGTTTTGA+CGG + chr3_3:69383521-69383540 Msa0467900:intron 30.0%
ATAGTAATTCCAAGTAACAC+AGG - chr3_3:69383689-69383708 None:intergenic 30.0%
!! GAGTTTTGACATATGCTATT+TGG + chr3_3:69384454-69384473 Msa0467900:intron 30.0%
! TTTGACATATGCTATTTGGT+TGG + chr3_3:69384458-69384477 Msa0467900:intron 30.0%
AACAATGCATACTAAGTGAT+TGG - chr3_3:69384532-69384551 None:intergenic 30.0%
AATTCAGTTGCTTGAATGAT+GGG - chr3_3:69384896-69384915 None:intergenic 30.0%
AAATTCAGTTGCTTGAATGA+TGG - chr3_3:69384897-69384916 None:intergenic 30.0%
ATACAAGAAAGAATGCAGAT+TGG - chr3_3:69385239-69385258 None:intergenic 30.0%
CTTATCCATAGTTTCACATA+TGG + chr3_3:69385518-69385537 Msa0467900:intron 30.0%
TGATCCCTAATAATCTGAAA+TGG + chr3_3:69385552-69385571 Msa0467900:intron 30.0%
AAATTGCACAATCAGAAAGA+AGG - chr3_3:69385583-69385602 None:intergenic 30.0%
TTTCTGATTGTGCAATTTGA+TGG + chr3_3:69385585-69385604 Msa0467900:intron 30.0%
TTAACTAAGTATAGCAAACC+TGG - chr3_3:69385704-69385723 None:intergenic 30.0%
TTGCATCTATACGGAAAAAT+GGG - chr3_3:69385784-69385803 None:intergenic 30.0%
! AAATTGACGTTACCACATTT+TGG - chr3_3:69385830-69385849 None:intergenic 30.0%
TCATCCATGCTTATAATCTA+TGG + chr3_3:69385973-69385992 Msa0467900:intron 30.0%
TTAGCCATAGATTATAAGCA+TGG - chr3_3:69385980-69385999 None:intergenic 30.0%
TGAAGGTTAGCAAATTGAAA+AGG - chr3_3:69386334-69386353 None:intergenic 30.0%
TCTGTTGCAACAATAAATGA+AGG - chr3_3:69386351-69386370 None:intergenic 30.0%
TTTATTGTTGCAACAGAGAT+TGG + chr3_3:69386354-69386373 Msa0467900:CDS 30.0%
AACAAAAGAATCCAAATGAC+AGG - chr3_3:69386484-69386503 None:intergenic 30.0%
AGGTACAAAGGAAATAAACT+AGG - chr3_3:69386527-69386546 None:intergenic 30.0%
ATCTTTATGCCAGAAAAATC+TGG - chr3_3:69386795-69386814 None:intergenic 30.0%
!!! TCCAGTTTTAAGTTTCCTTT+TGG + chr3_3:69386825-69386844 Msa0467900:three_prime_UTR 30.0%
ACCAAAAGGAAACTTAAAAC+TGG - chr3_3:69386829-69386848 None:intergenic 30.0%
!!! ACATTTCAGTTTTAGCTTGT+TGG + chr3_3:69386945-69386964 Msa0467900:three_prime_UTR 30.0%
AGGGATTCTATACATATTTG+GGG - chr3_3:69387471-69387490 None:intergenic 30.0%
CAGGGATTCTATACATATTT+GGG - chr3_3:69387472-69387491 None:intergenic 30.0%
TCAGGGATTCTATACATATT+TGG - chr3_3:69387473-69387492 None:intergenic 30.0%
! GTTATTTGAACCACCATTTT+TGG + chr3_3:69387598-69387617 Msa0467900:three_prime_UTR 30.0%
!! ACCATTTTTGGACAACTTAT+GGG + chr3_3:69387610-69387629 Msa0467900:three_prime_UTR 30.0%
CACATTGTCTTGTATATCTT+TGG + chr3_3:69387703-69387722 Msa0467900:three_prime_UTR 30.0%
GTTATTTGAACATCCACTTT+GGG - chr3_3:69387745-69387764 None:intergenic 30.0%
! TGTTATTTGAACATCCACTT+TGG - chr3_3:69387746-69387765 None:intergenic 30.0%
TTAATATTTGGGAACTACAG+GGG - chr3_3:69388042-69388061 None:intergenic 30.0%
CATTAATATTTGGGAACTAC+AGG - chr3_3:69388044-69388063 None:intergenic 30.0%
CAGGGATTGCATTAATATTT+GGG - chr3_3:69388053-69388072 None:intergenic 30.0%
TCAGGGATTGCATTAATATT+TGG - chr3_3:69388054-69388073 None:intergenic 30.0%
GTGATGATACAAGTAATTCA+GGG - chr3_3:69388071-69388090 None:intergenic 30.0%
TGTGATGATACAAGTAATTC+AGG - chr3_3:69388072-69388091 None:intergenic 30.0%
GTGAACACCTTATGAATAAA+AGG - chr3_3:69388192-69388211 None:intergenic 30.0%
!! AATGGCTGGACATTTTAAAA+AGG + chr3_3:69388343-69388362 Msa0467900:three_prime_UTR 30.0%
TTCGAAAGCGAAATTGAAGA+AGG - chr3_3:69383181-69383200 None:intergenic 35.0%
!!! ATTCCAATTTTTTCATCGGG+GGG - chr3_3:69383405-69383424 None:intergenic 35.0%
!!! GATTCCAATTTTTTCATCGG+GGG - chr3_3:69383406-69383425 None:intergenic 35.0%
AACAAATCCGTCAAAACCTA+TGG - chr3_3:69383531-69383550 None:intergenic 35.0%
!! TGACGGATTTGTTGTACTTT+AGG + chr3_3:69383538-69383557 Msa0467900:intron 35.0%
! TCAACATATCCTGTGTTACT+TGG + chr3_3:69383677-69383696 Msa0467900:intron 35.0%
ATAGTGGTGAGTGTGAAAAT+AGG - chr3_3:69383759-69383778 None:intergenic 35.0%
CATAGCAAGAATTTGTATCG+CGG - chr3_3:69383790-69383809 None:intergenic 35.0%
GCAATGTCAATTTCTCTTTC+AGG + chr3_3:69383948-69383967 Msa0467900:CDS 35.0%
CTTACAGAATTATGATCAGC+AGG - chr3_3:69384010-69384029 None:intergenic 35.0%
AAAATAGAGGAAACAGAGGA+TGG - chr3_3:69384153-69384172 None:intergenic 35.0%
! ATATGCTATTTGGTTGGACA+TGG + chr3_3:69384464-69384483 Msa0467900:intron 35.0%
! TATGCTATTTGGTTGGACAT+GGG + chr3_3:69384465-69384484 Msa0467900:intron 35.0%
ACCAATATAAATTGAAGGGG+GGG - chr3_3:69384635-69384654 None:intergenic 35.0%
CACCAATATAAATTGAAGGG+GGG - chr3_3:69384636-69384655 None:intergenic 35.0%
GCACCAATATAAATTGAAGG+GGG - chr3_3:69384637-69384656 None:intergenic 35.0%
GGCACCAATATAAATTGAAG+GGG - chr3_3:69384638-69384657 None:intergenic 35.0%
GGGCACCAATATAAATTGAA+GGG - chr3_3:69384639-69384658 None:intergenic 35.0%
TGAATAAAGACCCATAAGGT+GGG - chr3_3:69384660-69384679 None:intergenic 35.0%
TTGAATAAAGACCCATAAGG+TGG - chr3_3:69384661-69384680 None:intergenic 35.0%
CCATTGAATAAAGACCCATA+AGG - chr3_3:69384664-69384683 None:intergenic 35.0%
CCTTATGGGTCTTTATTCAA+TGG + chr3_3:69384661-69384680 Msa0467900:CDS 35.0%
GCTAGATGTAATGGTCTATA+CGG - chr3_3:69384772-69384791 None:intergenic 35.0%
TATAGACCATTACATCTAGC+AGG + chr3_3:69384772-69384791 Msa0467900:CDS 35.0%
! TTGCTTGAATGATGGGAAAA+GGG - chr3_3:69384889-69384908 None:intergenic 35.0%
!! TTTGTTGGTGATTATTTGGC+AGG + chr3_3:69385068-69385087 Msa0467900:intron 35.0%
AATATAGCTTCGTAAAGCCT+AGG - chr3_3:69385451-69385470 None:intergenic 35.0%
GATGACAAGTCTCAGAAAAA+GGG + chr3_3:69385677-69385696 Msa0467900:CDS 35.0%
TGCATCTATACGGAAAAATG+GGG - chr3_3:69385783-69385802 None:intergenic 35.0%
GTTGCATCTATACGGAAAAA+TGG - chr3_3:69385785-69385804 None:intergenic 35.0%
!! GGATATGATTATTTTGCTGC+AGG + chr3_3:69386014-69386033 Msa0467900:intron 35.0%
AGTGTTCTTATCAGACTTTG+AGG - chr3_3:69386040-69386059 None:intergenic 35.0%
! TTTTGATCTGGAGATGATGA+GGG - chr3_3:69386289-69386308 None:intergenic 35.0%
!! ATTTTGATCTGGAGATGATG+AGG - chr3_3:69386290-69386309 None:intergenic 35.0%
ATCTCCAGATCAAAATGAAC+AGG + chr3_3:69386294-69386313 Msa0467900:CDS 35.0%
!! CAAACCTGTTCATTTTGATC+TGG - chr3_3:69386301-69386320 None:intergenic 35.0%
ATAGCAATGGATAGGTACAA+AGG - chr3_3:69386539-69386558 None:intergenic 35.0%
AAACATGTCTTAGTACTCAC+TGG - chr3_3:69386587-69386606 None:intergenic 35.0%
TGAGTACTAAGACATGTTTG+AGG + chr3_3:69386588-69386607 Msa0467900:three_prime_UTR 35.0%
GAGTACTAAGACATGTTTGA+GGG + chr3_3:69386589-69386608 Msa0467900:three_prime_UTR 35.0%
GACACATATTATGAGAAGGT+GGG - chr3_3:69386709-69386728 None:intergenic 35.0%
TGACACATATTATGAGAAGG+TGG - chr3_3:69386710-69386729 None:intergenic 35.0%
!!! AGATGGTATTTTGGTCTTTG+TGG + chr3_3:69386747-69386766 Msa0467900:three_prime_UTR 35.0%
!! ACTGCTTTTAGTTAGTTGTG+TGG + chr3_3:69387041-69387060 Msa0467900:three_prime_UTR 35.0%
AAAACCTAGTATCATCAGCT+GGG - chr3_3:69387157-69387176 None:intergenic 35.0%
AAAAACCTAGTATCATCAGC+TGG - chr3_3:69387158-69387177 None:intergenic 35.0%
! AGCTGATGATACTAGGTTTT+TGG + chr3_3:69387157-69387176 Msa0467900:three_prime_UTR 35.0%
! GCTGATGATACTAGGTTTTT+GGG + chr3_3:69387158-69387177 Msa0467900:three_prime_UTR 35.0%
!! ATGATACTAGGTTTTTGGGA+GGG + chr3_3:69387162-69387181 Msa0467900:three_prime_UTR 35.0%
AATCTTTGTGAGTGCTTTGT+TGG + chr3_3:69387187-69387206 Msa0467900:three_prime_UTR 35.0%
! ATCTTTGTGAGTGCTTTGTT+GGG + chr3_3:69387188-69387207 Msa0467900:three_prime_UTR 35.0%
AATCTTTGTGAGTGCTTTGT+TGG + chr3_3:69387187-69387206 Msa0467900:three_prime_UTR 35.0%
! ATCTTTGTGAGTGCTTTGTT+GGG + chr3_3:69387188-69387207 Msa0467900:three_prime_UTR 35.0%
ACATAGATTAGCACTCAGTA+TGG - chr3_3:69387256-69387275 None:intergenic 35.0%
ACACAATGGGAAACAGAATA+TGG - chr3_3:69387297-69387316 None:intergenic 35.0%
AACTCTCCATGTAATTGACA+CGG - chr3_3:69387399-69387418 None:intergenic 35.0%
GAGAGTTAAAATGCACTCTT+GGG + chr3_3:69387412-69387431 Msa0467900:three_prime_UTR 35.0%
TACTTGCACTTTACCTGTAT+AGG + chr3_3:69387445-69387464 Msa0467900:three_prime_UTR 35.0%
TGTATAGAATCCCTGAATAC+CGG + chr3_3:69387477-69387496 Msa0467900:three_prime_UTR 35.0%
CATAAGTTGTCCAAAAATGG+TGG - chr3_3:69387611-69387630 None:intergenic 35.0%
!! CACCATTTTTGGACAACTTA+TGG + chr3_3:69387609-69387628 Msa0467900:three_prime_UTR 35.0%
TCCCATAAGTTGTCCAAAAA+TGG - chr3_3:69387614-69387633 None:intergenic 35.0%
CACATTGTCTTGTATACCTT+TGG - chr3_3:69387640-69387659 None:intergenic 35.0%
! CAAAGGTATACAAGACAATG+TGG + chr3_3:69387638-69387657 Msa0467900:three_prime_UTR 35.0%
! ATATTTCACTTGGGTGTCAT+TGG - chr3_3:69387833-69387852 None:intergenic 35.0%
TAGTTGAATCGTAATGTCAG+TGG - chr3_3:69387902-69387921 None:intergenic 35.0%
ACTAATGATATCATGAAGGC+TGG + chr3_3:69387959-69387978 Msa0467900:three_prime_UTR 35.0%
TTGACTCATGTAATTGACAC+AGG - chr3_3:69387987-69388006 None:intergenic 35.0%
AATAATGCTTCTCAGGAGAA+GGG - chr3_3:69388099-69388118 None:intergenic 35.0%
AAATAATGCTTCTCAGGAGA+AGG - chr3_3:69388100-69388119 None:intergenic 35.0%
AAAAGAAATGAAGAACTCGG+CGG + chr3_3:69388263-69388282 Msa0467900:three_prime_UTR 35.0%
! TCACGCACATTTTGCATTAA+AGG + chr3_3:69388381-69388400 Msa0467900:three_prime_UTR 35.0%
CCTCATATTGTATGCTTCAA+AGG - chr3_3:69388538-69388557 None:intergenic 35.0%
!! CCTTTGAAGCATACAATATG+AGG + chr3_3:69388535-69388554 Msa0467900:three_prime_UTR 35.0%
GACAAAACCCTAATTGAGGT+GGG - chr3_3:69383228-69383247 None:intergenic 40.0%
TGACAAAACCCTAATTGAGG+TGG - chr3_3:69383229-69383248 None:intergenic 40.0%
GGGGGGTTAATTAAGCAAAA+AGG - chr3_3:69383388-69383407 None:intergenic 40.0%
TAACCCCCCGATGAAAAAAT+TGG + chr3_3:69383399-69383418 Msa0467900:intron 40.0%
! TCAATCTGTTTTGCCTTTGC+AGG + chr3_3:69383429-69383448 Msa0467900:intron 40.0%
TTCCTGTTATCAACCTGCAA+AGG - chr3_3:69383445-69383464 None:intergenic 40.0%
AAATTGACATTGCCGCAACT+GGG - chr3_3:69383941-69383960 None:intergenic 40.0%
TGTTCATCGTTGTGTCTCTT+GGG + chr3_3:69384210-69384229 Msa0467900:intron 40.0%
! GGGGCACCAATATAAATTGA+AGG - chr3_3:69384640-69384659 None:intergenic 40.0%
GAATAAAGACCCATAAGGTG+GGG - chr3_3:69384659-69384678 None:intergenic 40.0%
AGTAAATGGAACCTCATAGG+GGG - chr3_3:69384698-69384717 None:intergenic 40.0%
CAGTAAATGGAACCTCATAG+GGG - chr3_3:69384699-69384718 None:intergenic 40.0%
CCAGTAAATGGAACCTCATA+GGG - chr3_3:69384700-69384719 None:intergenic 40.0%
TCCAGTAAATGGAACCTCAT+AGG - chr3_3:69384701-69384720 None:intergenic 40.0%
TATGAGGTTCCATTTACTGG+AGG + chr3_3:69384700-69384719 Msa0467900:CDS 40.0%
TCAGCCTATCAGTACAGTTA+TGG + chr3_3:69384724-69384743 Msa0467900:CDS 40.0%
! GCTTCCATAACTGTACTGAT+AGG - chr3_3:69384731-69384750 None:intergenic 40.0%
! CTGACTGAATGATGGGAAAA+GGG - chr3_3:69384850-69384869 None:intergenic 40.0%
CATTCAGCTGACTGAATGAT+GGG - chr3_3:69384857-69384876 None:intergenic 40.0%
! TGAATGATGGGAAAAGGGAA+AGG - chr3_3:69384845-69384864 None:intergenic 40.0%
! GTTGCTTGAATGATGGGAAA+AGG - chr3_3:69384890-69384909 None:intergenic 40.0%
! TTGGTGATTATTTGGCAGGT+GGG + chr3_3:69385072-69385091 Msa0467900:intron 40.0%
CTAACTGCAGAACGTGATTA+AGG - chr3_3:69385277-69385296 None:intergenic 40.0%
CTTAATCACGTTCTGCAGTT+AGG + chr3_3:69385275-69385294 Msa0467900:intron 40.0%
!! TCTTCTCTGAAGCATCAGTA+TGG + chr3_3:69385356-69385375 Msa0467900:intron 40.0%
ACAAGTACGAGTATGGTACT+GGG - chr3_3:69385424-69385443 None:intergenic 40.0%
TTGTCATCGCGAAAAAATCC+TGG - chr3_3:69385665-69385684 None:intergenic 40.0%
CGATGACAAGTCTCAGAAAA+AGG + chr3_3:69385676-69385695 Msa0467900:CDS 40.0%
GCATCTATACGGAAAAATGG+GGG - chr3_3:69385782-69385801 None:intergenic 40.0%
TGTCACGAGTTGCATCTATA+CGG - chr3_3:69385793-69385812 None:intergenic 40.0%
ATGCAACTCGTGACAATGAT+TGG + chr3_3:69385798-69385817 Msa0467900:CDS 40.0%
TGCAACTCGTGACAATGATT+GGG + chr3_3:69385799-69385818 Msa0467900:CDS 40.0%
ACAATTCTGTCTGTTGCACT+TGG - chr3_3:69386233-69386252 None:intergenic 40.0%
AAGTGCAACAGACAGAATTG+TGG + chr3_3:69386232-69386251 Msa0467900:CDS 40.0%
CTCTTATGCTTCCTGTCATT+TGG + chr3_3:69386470-69386489 Msa0467900:CDS 40.0%
TGACAACTTCTGCAACATAG+AGG - chr3_3:69386681-69386700 None:intergenic 40.0%
! ATGTGTCAGCCAGATTTTTC+TGG + chr3_3:69386783-69386802 Msa0467900:three_prime_UTR 40.0%
TCTGGCATAAAGATTGTTGC+AGG + chr3_3:69386801-69386820 Msa0467900:three_prime_UTR 40.0%
GCATACATGCTAAAAGTGGT+AGG - chr3_3:69386988-69387007 None:intergenic 40.0%
AGCAGTGACTCGAAAGTAAA+CGG - chr3_3:69387027-69387046 None:intergenic 40.0%
!! GATGATACTAGGTTTTTGGG+AGG + chr3_3:69387161-69387180 Msa0467900:three_prime_UTR 40.0%
GGAGAGTTAAAATGCACTCT+TGG + chr3_3:69387411-69387430 Msa0467900:three_prime_UTR 40.0%
! TACATATTTGGGGCCTATAC+AGG - chr3_3:69387461-69387480 None:intergenic 40.0%
GTATAGAATCCCTGAATACC+GGG + chr3_3:69387478-69387497 Msa0467900:three_prime_UTR 40.0%
GTGCTAATCGGATTTCACTT+TGG + chr3_3:69387502-69387521 Msa0467900:three_prime_UTR 40.0%
ACAAAGACACCAAAGACCAA+AGG - chr3_3:69387530-69387549 None:intergenic 40.0%
ACAACTTATGGGACAACCAA+AGG + chr3_3:69387621-69387640 Msa0467900:three_prime_UTR 40.0%
! AGAAGTCACTTGTTGCACTT+TGG + chr3_3:69388296-69388315 Msa0467900:three_prime_UTR 40.0%
!! TTGTTGCACTTTGGTCTTGA+AGG + chr3_3:69388305-69388324 Msa0467900:three_prime_UTR 40.0%
ATGTGCGTGATGAGATCATT+GGG - chr3_3:69388371-69388390 None:intergenic 40.0%
AATGTGCGTGATGAGATCAT+TGG - chr3_3:69388372-69388391 None:intergenic 40.0%
GCATTAAGCCTGACTACAAT+CGG + chr3_3:69388463-69388482 Msa0467900:three_prime_UTR 40.0%
AAGGTTCTACAGAAGTTGCA+TGG - chr3_3:69388519-69388538 None:intergenic 40.0%
AGCGTTGTAAAAGAGGCTTT+GGG - chr3_3:69388575-69388594 None:intergenic 40.0%
ATCAAGCAGCGTTGTAAAAG+AGG - chr3_3:69388582-69388601 None:intergenic 40.0%
TCCTTCTACTACTTCTCGAG+CGG - chr3_3:69383076-69383095 None:intergenic 45.0%
GGGAATTACCTGAGACATGA+CGG - chr3_3:69383146-69383165 None:intergenic 45.0%
GAAGAAGGCGATGAATCGAA+GGG - chr3_3:69383166-69383185 None:intergenic 45.0%
TGAAGAAGGCGATGAATCGA+AGG - chr3_3:69383167-69383186 None:intergenic 45.0%
TCGTTTCTCCCACCTCAATT+AGG + chr3_3:69383217-69383236 Msa0467900:intron 45.0%
CGTTTCTCCCACCTCAATTA+GGG + chr3_3:69383218-69383237 Msa0467900:intron 45.0%
!! TGCCTTTGCAGGTTGATAAC+AGG + chr3_3:69383440-69383459 Msa0467900:intron 45.0%
TATCGCGGAACGTAACATAG+TGG - chr3_3:69383775-69383794 None:intergenic 45.0%
TAAGTCCCTTTCCTCTAGCA+AGG + chr3_3:69383838-69383857 Msa0467900:intron 45.0%
AAGTCCCTTTCCTCTAGCAA+GGG + chr3_3:69383839-69383858 Msa0467900:intron 45.0%
ATATCAGATCCCCTTGCTAG+AGG - chr3_3:69383852-69383871 None:intergenic 45.0%
TCTAGCAAGGGGATCTGATA+TGG + chr3_3:69383851-69383870 Msa0467900:intron 45.0%
!! TTTTGTTTGTAGGTAGCCGC+AGG + chr3_3:69383897-69383916 Msa0467900:intron 45.0%
TTTGTTTGTAGGTAGCCGCA+GGG + chr3_3:69383898-69383917 Msa0467900:intron 45.0%
ATGTCCAATCATCTTCCCTG+CGG - chr3_3:69383916-69383935 None:intergenic 45.0%
GAAATTGACATTGCCGCAAC+TGG - chr3_3:69383942-69383961 None:intergenic 45.0%
GAATTATGATCAGCAGGCCT+TGG - chr3_3:69384004-69384023 None:intergenic 45.0%
ACAGAGGATGGACAATGCAA+AGG - chr3_3:69384141-69384160 None:intergenic 45.0%
CTGTTCATCGTTGTGTCTCT+TGG + chr3_3:69384209-69384228 Msa0467900:intron 45.0%
ATAAGGAGCTGCGGATGAAT+AGG - chr3_3:69384599-69384618 None:intergenic 45.0%
! TCATCCGCAGCTCCTTATTT+AGG + chr3_3:69384601-69384620 Msa0467900:CDS 45.0%
GCCCCCCCTTCAATTTATAT+TGG + chr3_3:69384631-69384650 Msa0467900:CDS 45.0%
! TATATTGGTGCCCCACCTTA+TGG + chr3_3:69384646-69384665 Msa0467900:CDS 45.0%
! ATATTGGTGCCCCACCTTAT+GGG + chr3_3:69384647-69384666 Msa0467900:CDS 45.0%
GTAAATGGAACCTCATAGGG+GGG - chr3_3:69384697-69384716 None:intergenic 45.0%
CCCTATGAGGTTCCATTTAC+TGG + chr3_3:69384697-69384716 Msa0467900:CDS 45.0%
TAGGCTGATCCTCCAGTAAA+TGG - chr3_3:69384712-69384731 None:intergenic 45.0%
! GCTGACTGAATGATGGGAAA+AGG - chr3_3:69384851-69384870 None:intergenic 45.0%
CCATTCAGCTGACTGAATGA+TGG - chr3_3:69384858-69384877 None:intergenic 45.0%
CCATCATTCAGTCAGCTGAA+TGG + chr3_3:69384855-69384874 Msa0467900:intron 45.0%
!! GTTGGTGATTATTTGGCAGG+TGG + chr3_3:69385071-69385090 Msa0467900:intron 45.0%
TTATCCCATACCATTGCTCC+AGG - chr3_3:69385152-69385171 None:intergenic 45.0%
CACAAGTACGAGTATGGTAC+TGG - chr3_3:69385425-69385444 None:intergenic 45.0%
AGGATGCACAAGTACGAGTA+TGG - chr3_3:69385431-69385450 None:intergenic 45.0%
TACTCGTACTTGTGCATCCT+AGG + chr3_3:69385431-69385450 Msa0467900:intron 45.0%
TAGTTAACCCTTGCCTTAGC+AGG + chr3_3:69385631-69385650 Msa0467900:intron 45.0%
AGTTAACCCTTGCCTTAGCA+GGG + chr3_3:69385632-69385651 Msa0467900:intron 45.0%
AAGTCTCAGAAAAAGGGACC+AGG + chr3_3:69385683-69385702 Msa0467900:CDS 45.0%
GATTGGGCTTGTCCAAAATG+TGG + chr3_3:69385815-69385834 Msa0467900:CDS 45.0%
AAATGCAACACACCCAAACC+CGG + chr3_3:69385878-69385897 Msa0467900:CDS 45.0%
GATATGAAGGCAGCATACCT+GGG - chr3_3:69385906-69385925 None:intergenic 45.0%
AGATATGAAGGCAGCATACC+TGG - chr3_3:69385907-69385926 None:intergenic 45.0%
CCAATCAGAGCAAAAGATGC+CGG + chr3_3:69386156-69386175 Msa0467900:intron 45.0%
!! TGTTGCACTTGGTTCGGAAT+GGG - chr3_3:69386222-69386241 None:intergenic 45.0%
TCTGTCTGTTGCACTTGGTT+CGG - chr3_3:69386228-69386247 None:intergenic 45.0%
GACATGTTTGAGGGTTGAGA+AGG + chr3_3:69386598-69386617 Msa0467900:three_prime_UTR 45.0%
TCTTCCAGCATTGCTCAGTT+TGG + chr3_3:69386631-69386650 Msa0467900:three_prime_UTR 45.0%
CTTCCAGCATTGCTCAGTTT+GGG + chr3_3:69386632-69386651 Msa0467900:three_prime_UTR 45.0%
GCAGACAGTTCAGAACCAAA+AGG - chr3_3:69386843-69386862 None:intergenic 45.0%
TGGCGCATACATGCTAAAAG+TGG - chr3_3:69386992-69387011 None:intergenic 45.0%
GTAAACGGTTTCTGTGATGC+TGG - chr3_3:69387012-69387031 None:intergenic 45.0%
! TGCTTTGTTGGGTCCATACT+GGG + chr3_3:69387199-69387218 Msa0467900:three_prime_UTR 45.0%
CATGTAATTGACACGGCTGA+CGG - chr3_3:69387392-69387411 None:intergenic 45.0%
ATTAGCACTCCCGGTATTCA+GGG - chr3_3:69387490-69387509 None:intergenic 45.0%
!! TGAATACCGGGAGTGCTAAT+CGG + chr3_3:69387490-69387509 Msa0467900:three_prime_UTR 45.0%
TGAAATCCGATTAGCACTCC+CGG - chr3_3:69387499-69387518 None:intergenic 45.0%
!! GGATTTCACTTTGGTGCCTT+TGG + chr3_3:69387511-69387530 Msa0467900:three_prime_UTR 45.0%
!! ACTTTGGTGCCTTTGGTCTT+TGG + chr3_3:69387518-69387537 Msa0467900:three_prime_UTR 45.0%
!! TCCACTTTGGGACAACTTGT+GGG - chr3_3:69387733-69387752 None:intergenic 45.0%
!! ATCCACTTTGGGACAACTTG+TGG - chr3_3:69387734-69387753 None:intergenic 45.0%
!!! TCATTGGCACTTGGTGCTTT+TGG - chr3_3:69387817-69387836 None:intergenic 45.0%
TCCAGCCATTTCTCGTCATT+GGG - chr3_3:69388333-69388352 None:intergenic 45.0%
TGTGCGTGATGAGATCATTG+GGG - chr3_3:69388370-69388389 None:intergenic 45.0%
CAGCGTTGTAAAAGAGGCTT+TGG - chr3_3:69388576-69388595 None:intergenic 45.0%
CTTCTACTACTTCTCGAGCG+GGG - chr3_3:69383074-69383093 None:intergenic 50.0%
CCTTCTACTACTTCTCGAGC+GGG - chr3_3:69383075-69383094 None:intergenic 50.0%
! TGGTAACGAACCATCAGTCC+TGG - chr3_3:69383488-69383507 None:intergenic 50.0%
AGTCCCTTTCCTCTAGCAAG+GGG + chr3_3:69383840-69383859 Msa0467900:intron 50.0%
GATCCCCTTGCTAGAGGAAA+GGG - chr3_3:69383846-69383865 None:intergenic 50.0%
AGATCCCCTTGCTAGAGGAA+AGG - chr3_3:69383847-69383866 None:intergenic 50.0%
GGGGATCTGATATGGTTCTC+CGG + chr3_3:69383859-69383878 Msa0467900:intron 50.0%
GATTGGACATGTCCCAGTTG+CGG + chr3_3:69383926-69383945 Msa0467900:CDS 50.0%
GGTGCAGTTACGCATATTGC+AGG - chr3_3:69383978-69383997 None:intergenic 50.0%
ATGATCAGCAGGCCTTGGTT+GGG - chr3_3:69383999-69384018 None:intergenic 50.0%
TATGATCAGCAGGCCTTGGT+TGG - chr3_3:69384000-69384019 None:intergenic 50.0%
GAGGCTTCACAGCAGATTTC+TGG - chr3_3:69384561-69384580 None:intergenic 50.0%
GGAGCCTAAATAAGGAGCTG+CGG - chr3_3:69384608-69384627 None:intergenic 50.0%
! ATAAATTGAAGGGGGGGCGT+TGG - chr3_3:69384629-69384648 None:intergenic 50.0%
GCTGGTCCTGCTAGATGTAA+TGG - chr3_3:69384781-69384800 None:intergenic 50.0%
GAACATACCGTGTCCAACCA+CGG - chr3_3:69384821-69384840 None:intergenic 50.0%
ATATGCCATGCCCCAGCTAT+TGG + chr3_3:69385097-69385116 Msa0467900:CDS 50.0%
CCATAGCGATCCAATAGCTG+GGG - chr3_3:69385110-69385129 None:intergenic 50.0%
GCCATAGCGATCCAATAGCT+GGG - chr3_3:69385111-69385130 None:intergenic 50.0%
CTATTGGATCGCTATGGCCT+CGG + chr3_3:69385113-69385132 Msa0467900:CDS 50.0%
CCATTGCTCCAGGTCCAATA+GGG - chr3_3:69385142-69385161 None:intergenic 50.0%
ACCATTGCTCCAGGTCCAAT+AGG - chr3_3:69385143-69385162 None:intergenic 50.0%
TTGGACCTGGAGCAATGGTA+TGG + chr3_3:69385144-69385163 Msa0467900:intron 50.0%
TGGACCTGGAGCAATGGTAT+GGG + chr3_3:69385145-69385164 Msa0467900:intron 50.0%
! CCGGCATCTTTTGCTCTGAT+TGG - chr3_3:69386159-69386178 None:intergenic 50.0%
ATCAGAGCAAAAGATGCCGG+AGG + chr3_3:69386159-69386178 Msa0467900:intron 50.0%
TCAGAGCAAAAGATGCCGGA+GGG + chr3_3:69386160-69386179 Msa0467900:intron 50.0%
!! CTGTTGCACTTGGTTCGGAA+TGG - chr3_3:69386223-69386242 None:intergenic 50.0%
! GGAGATTTTTCCGACTCAGC+TGG - chr3_3:69386268-69386287 None:intergenic 50.0%
GCAATGCTGGAAGACAACTC+TGG - chr3_3:69386625-69386644 None:intergenic 50.0%
ACACCCAAACTGAGCAATGC+TGG - chr3_3:69386638-69386657 None:intergenic 50.0%
AGCACCCAGCTGATGATACT+AGG + chr3_3:69387150-69387169 Msa0467900:three_prime_UTR 50.0%
! GTGCTTTGTTGGGTCCATAC+TGG + chr3_3:69387198-69387217 Msa0467900:three_prime_UTR 50.0%
TTTGTTGGGTCCATACTGGG+CGG + chr3_3:69387202-69387221 Msa0467900:three_prime_UTR 50.0%
! AAAGATTAGCCCGCCCAGTA+TGG - chr3_3:69387215-69387234 None:intergenic 50.0%
CCGTATGTCAGCGACACAAT+GGG - chr3_3:69387310-69387329 None:intergenic 50.0%
! CCCATTGTGTCGCTGACATA+CGG + chr3_3:69387307-69387326 Msa0467900:three_prime_UTR 50.0%
CGTCAGCCGTGTCAATTACA+TGG + chr3_3:69387390-69387409 Msa0467900:three_prime_UTR 50.0%
GATTAGCACTCCCGGTATTC+AGG - chr3_3:69387491-69387510 None:intergenic 50.0%
GGTGGAGAGAGAAGAGAGAT+AGG - chr3_3:69387554-69387573 None:intergenic 50.0%
TCCCACAAGTTGTCCCAAAG+TGG + chr3_3:69387729-69387748 Msa0467900:three_prime_UTR 50.0%
!! ACTTGGGTGTCATTGGCACT+TGG - chr3_3:69387826-69387845 None:intergenic 50.0%
TAATGTCAGTGGTGCGCAGT+AGG - chr3_3:69387891-69387910 None:intergenic 50.0%
AGGTCCCCAATGACGAGAAA+TGG + chr3_3:69388325-69388344 Msa0467900:three_prime_UTR 50.0%
CCAGCCATTTCTCGTCATTG+GGG - chr3_3:69388332-69388351 None:intergenic 50.0%
GTCCAGCCATTTCTCGTCAT+TGG - chr3_3:69388334-69388353 None:intergenic 50.0%
! AGGCTATGCCGATTGTAGTC+AGG - chr3_3:69388474-69388493 None:intergenic 50.0%
CCCGCTCGAGAAGTAGTAGA+AGG + chr3_3:69383072-69383091 Msa0467900:five_prime_UTR 55.0%
ACTGCTCACCGTCATGTCTC+AGG + chr3_3:69383135-69383154 Msa0467900:exon 55.0%
GTAGCCGCAGGGAAGATGAT+TGG + chr3_3:69383909-69383928 Msa0467900:CDS 55.0%
TGCGTAACTGCACCCAACCA+AGG + chr3_3:69383984-69384003 Msa0467900:CDS 55.0%
GAAGCCTCTTCAAGCTCCAC+AGG + chr3_3:69384573-69384592 Msa0467900:CDS 55.0%
TAGGCCTGTGGAGCTTGAAG+AGG - chr3_3:69384580-69384599 None:intergenic 55.0%
!! GGGGCGTTGGAGCCTAAATA+AGG - chr3_3:69384616-69384635 None:intergenic 55.0%
ATCACCAGTTCCCCCCTATG+AGG + chr3_3:69384684-69384703 Msa0467900:CDS 55.0%
TATGGAAGCCGTGTTCCTGC+TGG + chr3_3:69384742-69384761 Msa0467900:CDS 55.0%
CCCCAGCTATTGGATCGCTA+TGG + chr3_3:69385107-69385126 Msa0467900:CDS 55.0%
GGCCATAGCGATCCAATAGC+TGG - chr3_3:69385112-69385131 None:intergenic 55.0%
!! TATGGCCTCGGTGTCCCTAT+TGG + chr3_3:69385125-69385144 Msa0467900:CDS 55.0%
CCCTATTGGACCTGGAGCAA+TGG + chr3_3:69385139-69385158 Msa0467900:CDS 55.0%
CTAGTGCCCTGCTAAGGCAA+GGG - chr3_3:69385641-69385660 None:intergenic 55.0%
CATACCTGGGATCCGGGTTT+GGG - chr3_3:69385893-69385912 None:intergenic 55.0%
AAGGCAGCATACCTGGGATC+CGG - chr3_3:69385900-69385919 None:intergenic 55.0%
AAAAGATGCCGGAGGGAAGC+TGG + chr3_3:69386167-69386186 Msa0467900:CDS 55.0%
TCACACTTCCAGCTTCCCTC+CGG - chr3_3:69386178-69386197 None:intergenic 55.0%
TGCTGACAAGCCAGCTGAGT+CGG + chr3_3:69386255-69386274 Msa0467900:CDS 55.0%
TTGTTGGGTCCATACTGGGC+GGG + chr3_3:69387203-69387222 Msa0467900:three_prime_UTR 55.0%
GCCGTATGTCAGCGACACAA+TGG - chr3_3:69387311-69387330 None:intergenic 55.0%
CCCCAATGACGAGAAATGGC+TGG + chr3_3:69388329-69388348 Msa0467900:three_prime_UTR 55.0%
CTACTACTTCTCGAGCGGGG+CGG - chr3_3:69383071-69383090 None:intergenic 60.0%
! GTGAGCAGTGAGTGCTGCGA+GGG - chr3_3:69383124-69383143 None:intergenic 60.0%
ACCATCAGTCCTGGCACGCT+TGG - chr3_3:69383479-69383498 None:intergenic 60.0%
GCTGCGGATGAATAGGCCTG+TGG - chr3_3:69384592-69384611 None:intergenic 60.0%
GGAACCTCATAGGGGGGAAC+TGG - chr3_3:69384691-69384710 None:intergenic 60.0%
! ACGGACTGCCAGCAGGAACA+CGG - chr3_3:69384753-69384772 None:intergenic 60.0%
! GGTCTATACGGACTGCCAGC+AGG - chr3_3:69384760-69384779 None:intergenic 60.0%
GGACCAGCACCATACACCAG+TGG + chr3_3:69384793-69384812 Msa0467900:CDS 60.0%
GCTCCACTGGTGTATGGTGC+TGG - chr3_3:69384799-69384818 None:intergenic 60.0%
ACCATACACCAGTGGAGCCG+TGG + chr3_3:69384801-69384820 Msa0467900:CDS 60.0%
ACCACGGCTCCACTGGTGTA+TGG - chr3_3:69384805-69384824 None:intergenic 60.0%
TACACCAGTGGAGCCGTGGT+TGG + chr3_3:69384805-69384824 Msa0467900:CDS 60.0%
AGTGGAGCCGTGGTTGGACA+CGG + chr3_3:69384811-69384830 Msa0467900:CDS 60.0%
GCGATCCAATAGCTGGGGCA+TGG - chr3_3:69385105-69385124 None:intergenic 60.0%
CAGGTCCAATAGGGACACCG+AGG - chr3_3:69385133-69385152 None:intergenic 60.0%
!! CTCGGTGTCCCTATTGGACC+TGG + chr3_3:69385131-69385150 Msa0467900:CDS 60.0%
CCTAGTGCCCTGCTAAGGCA+AGG - chr3_3:69385642-69385661 None:intergenic 60.0%
! CCTTGCCTTAGCAGGGCACT+AGG + chr3_3:69385639-69385658 Msa0467900:intron 60.0%
GCATACCTGGGATCCGGGTT+TGG - chr3_3:69385894-69385913 None:intergenic 60.0%
AGGCAGCATACCTGGGATCC+GGG - chr3_3:69385899-69385918 None:intergenic 60.0%
! GGTGAGCAGTGAGTGCTGCG+AGG - chr3_3:69383125-69383144 None:intergenic 65.0%
AGTCCTGGCACGCTTGGCAG+CGG - chr3_3:69383473-69383492 None:intergenic 65.0%
GCCAAGCGTGCCAGGACTGA+TGG + chr3_3:69383475-69383494 Msa0467900:intron 65.0%
GTGTCCAACCACGGCTCCAC+TGG - chr3_3:69384812-69384831 None:intergenic 65.0%
CCTGGCCTAGTGCCCTGCTA+AGG - chr3_3:69385647-69385666 None:intergenic 65.0%
! CCTTAGCAGGGCACTAGGCC+AGG + chr3_3:69385644-69385663 Msa0467900:intron 65.0%
CACACCCAAACCCGGATCCC+AGG + chr3_3:69385886-69385905 Msa0467900:CDS 65.0%
CTTCCGCTGCCAAGCGTGCC+AGG + chr3_3:69383467-69383486 Msa0467900:intron 70.0%
Chromosome Type Strat End Strand Name
chr3_3 gene 69383020 69388605 69383020 ID=Msa0467900;Name=Msa0467900
chr3_3 mRNA 69383020 69388605 69383020 ID=Msa0467900-mRNA-1;Parent=Msa0467900;Name=Msa0467900-mRNA-1;_AED=0.02;_eAED=0.02;_QI=128|0.87|0.88|1|0.75|0.88|9|2098|342
chr3_3 exon 69383020 69383156 69383020 ID=Msa0467900-mRNA-1:exon:16386;Parent=Msa0467900-mRNA-1
chr3_3 exon 69383451 69383481 69383451 ID=Msa0467900-mRNA-1:exon:16387;Parent=Msa0467900-mRNA-1
chr3_3 exon 69383909 69384024 69383909 ID=Msa0467900-mRNA-1:exon:16388;Parent=Msa0467900-mRNA-1
chr3_3 exon 69384562 69384832 69384562 ID=Msa0467900-mRNA-1:exon:16389;Parent=Msa0467900-mRNA-1
chr3_3 exon 69385090 69385160 69385090 ID=Msa0467900-mRNA-1:exon:16390;Parent=Msa0467900-mRNA-1
chr3_3 exon 69385653 69385704 69385653 ID=Msa0467900-mRNA-1:exon:16391;Parent=Msa0467900-mRNA-1
chr3_3 exon 69385798 69385907 69385798 ID=Msa0467900-mRNA-1:exon:16392;Parent=Msa0467900-mRNA-1
chr3_3 exon 69386036 69386060 69386036 ID=Msa0467900-mRNA-1:exon:16393;Parent=Msa0467900-mRNA-1
chr3_3 exon 69386164 69388605 69386164 ID=Msa0467900-mRNA-1:exon:16394;Parent=Msa0467900-mRNA-1
chr3_3 five_prime_UTR 69383020 69383147 69383020 ID=Msa0467900-mRNA-1:five_prime_utr;Parent=Msa0467900-mRNA-1
chr3_3 CDS 69383148 69383156 69383148 ID=Msa0467900-mRNA-1:cds;Parent=Msa0467900-mRNA-1
chr3_3 CDS 69383451 69383481 69383451 ID=Msa0467900-mRNA-1:cds;Parent=Msa0467900-mRNA-1
chr3_3 CDS 69383909 69384024 69383909 ID=Msa0467900-mRNA-1:cds;Parent=Msa0467900-mRNA-1
chr3_3 CDS 69384562 69384832 69384562 ID=Msa0467900-mRNA-1:cds;Parent=Msa0467900-mRNA-1
chr3_3 CDS 69385090 69385160 69385090 ID=Msa0467900-mRNA-1:cds;Parent=Msa0467900-mRNA-1
chr3_3 CDS 69385653 69385704 69385653 ID=Msa0467900-mRNA-1:cds;Parent=Msa0467900-mRNA-1
chr3_3 CDS 69385798 69385907 69385798 ID=Msa0467900-mRNA-1:cds;Parent=Msa0467900-mRNA-1
chr3_3 CDS 69386036 69386060 69386036 ID=Msa0467900-mRNA-1:cds;Parent=Msa0467900-mRNA-1
chr3_3 CDS 69386164 69386507 69386164 ID=Msa0467900-mRNA-1:cds;Parent=Msa0467900-mRNA-1
chr3_3 three_prime_UTR 69386508 69388605 69386508 ID=Msa0467900-mRNA-1:three_prime_utr;Parent=Msa0467900-mRNA-1
Gene Sequence

>Msa0467900

ATGTCTCAGGTTGATAACAGGAATTCTTCCGCTGCCAAGCGTAGCCGCAGGGAAGATGATTGGACATGTCCCAGTTGCGGCAATGTCAATTTCTCTTTCAGGACAACCTGCAATATGCGTAACTGCACCCAACCAAGGCCTGCTGATCATAATTCTAAATCTGCTGTGAAGCCTCTTCAAGCTCCACAGGCCTATTCATCCGCAGCTCCTTATTTAGGCTCCAACGCCCCCCCTTCAATTTATATTGGTGCCCCACCTTATGGGTCTTTATTCAATGGATCACCAGTTCCCCCCTATGAGGTTCCATTTACTGGAGGATCAGCCTATCAGTACAGTTATGGAAGCCGTGTTCCTGCTGGCAGTCCGTATAGACCATTACATCTAGCAGGACCAGCACCATACACCAGTGGAGCCGTGGTTGGACACGGTGGGATATATGCCATGCCCCAGCTATTGGATCGCTATGGCCTCGGTGTCCCTATTGGACCTGGAGCAATGGGCACTAGGCCAGGATTTTTTCGCGATGACAAGTCTCAGAAAAAGGGACCAGATGCAACTCGTGACAATGATTGGGCTTGTCCAAAATGTGGTAACGTCAATTTCTCATTTAGAACTGTTTGCAACATGAGAAAATGCAACACACCCAAACCCGGATCCCAGGCCTCAAAGTCTGATAAGAACACTAAGCAAAAGATGCCGGAGGGAAGCTGGAAGTGTGAAAAATGTAATAACATAAATTACCCATTCCGAACCAAGTGCAACAGACAGAATTGTGGTGCTGACAAGCCAGCTGAGTCGGAAAAATCTCCCTCATCATCTCCAGATCAAAATGAACAGGTTTGTTATGCAAAGCCTTTTCAATTTGCTAACCTTCATTTATTGTTGCAACAGAGATTGGTTTTTCATGAGCAGCTTTGTGACATAGTGAATATTTTCAAATTGAAAGCTGTTGTGAAGTTTTTGTTTAAATGTGTTTTTTCTGAAAAAGCTTCTCTTATGCTTCCTGTCATTTGGATTCTTTTGTTGTGA
Protein sequence

>Msa0467900

MSQVDNRNSSAAKRSRREDDWTCPSCGNVNFSFRTTCNMRNCTQPRPADHNSKSAVKPLQAPQAYSSAAPYLGSNAPPSIYIGAPPYGSLFNGSPVPPYEVPFTGGSAYQYSYGSRVPAGSPYRPLHLAGPAPYTSGAVVGHGGIYAMPQLLDRYGLGVPIGPGAMGTRPGFFRDDKSQKKGPDATRDNDWACPKCGNVNFSFRTVCNMRKCNTPKPGSQASKSDKNTKQKMPEGSWKCEKCNNINYPFRTKCNRQNCGADKPAESEKSPSSSPDQNEQVCYAKPFQFANLHLLLQQRLVFHEQLCDIVNIFKLKAVVKFLFKCVFSEKASLMLPVIWILLL*