AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0302580


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0302580 MtrunA17_Chr2g0328831 88.845 251 0 1 40 290 1 223 7.82e-163 451
Msa0302580 MtrunA17_Chr5g0435161 87.649 251 3 1 40 290 1 223 1.02e-160 446
Msa0302580 MtrunA17_Chr7g0255251 32.558 129 87 0 48 176 2 130 1.62e-17 79.0
Msa0302580 MtrunA17_Chr4g0045861 32.283 127 86 0 50 176 4 130 2.58e-16 75.9
Msa0302580 MtrunA17_Chr4g0010841 94.118 34 2 0 97 130 1 34 7.05e-15 68.6
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0302580 AT3G60820.1 77.689 251 28 1 40 290 1 223 1.08e-142 400
Msa0302580 AT3G60820.3 77.689 251 28 1 40 290 1 223 1.08e-142 400
Msa0302580 AT3G60820.2 76.892 251 30 1 40 290 1 223 3.42e-141 397
Msa0302580 AT1G21720.1 32.558 129 87 0 48 176 2 130 1.01e-17 80.1
Msa0302580 AT1G77440.2 31.783 129 88 0 48 176 2 130 6.28e-17 77.8
Msa0302580 AT1G77440.1 31.783 129 88 0 48 176 2 130 6.28e-17 77.8

Find 89 sgRNAs with CRISPR-Local

Find 305 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CATAGACCACATTCAGAATT+TGG 0.131164 2_3:-59405048 None:intergenic
AGCTTACAAGTGAGAGATTT+TGG 0.149319 2_3:-59401638 None:intergenic
TGATGATGATATTCAAATTT+TGG 0.175171 2_3:+59400761 Msa0302580:CDS
GAAGGGTGGGACTGCTCTTT+GGG 0.184250 2_3:+59400786 Msa0302580:CDS
CGAAGGGTGGGACTGCTCTT+TGG 0.193174 2_3:+59400785 Msa0302580:CDS
ATTAATATAACAAAATATTT+AGG 0.260434 2_3:-59405227 None:intergenic
TGTTGTTTAGTCATGGTAAA+TGG 0.280507 2_3:-59401349 None:intergenic
GGATATAGCTCTCAGGGTTC+TGG 0.295385 2_3:+59404360 Msa0302580:CDS
TGACTAAACAACACGCTAAT+TGG 0.296923 2_3:+59401359 Msa0302580:CDS
AAATGTGTGATGGCTTCTTC+TGG 0.302083 2_3:+59402658 Msa0302580:CDS
AAGCCAGAGTTAGTTTCATT+TGG 0.308723 2_3:-59405256 None:intergenic
TTGGAAAGCATTCCTCGATT+TGG 0.328143 2_3:-59405085 None:intergenic
TACTATTCTTTCAATGTGTT+GGG 0.329503 2_3:+59404187 Msa0302580:CDS
GATGAATACCACCAGCATTT+AGG 0.333947 2_3:-59404936 None:intergenic
TTACTATTCTTTCAATGTGT+TGG 0.338506 2_3:+59404186 Msa0302580:CDS
TTCAACCGCCTGATCTTAAT+AGG 0.339019 2_3:-59404773 None:intergenic
TACCCTCCATTGTTGTCATA+TGG 0.354246 2_3:-59401385 None:intergenic
AGATCTTGTGTCGCAATTGC+TGG 0.365009 2_3:+59401544 Msa0302580:intron
GGCAGGTAAGAGGAGTGGGC+TGG 0.368090 2_3:-59404427 None:intergenic
GGGAAGTAGCTAGGTTGTCT+TGG 0.373272 2_3:+59400808 Msa0302580:CDS
AGCCAGAGTTAGTTTCATTT+GGG 0.377673 2_3:-59405255 None:intergenic
AGACTTGTTCTGAGAATGTT+TGG 0.378202 2_3:+59405018 Msa0302580:three_prime_UTR
CAGGTAAGAGGAGTGGGCTG+GGG 0.380698 2_3:-59404425 None:intergenic
GCAGGTAAGAGGAGTGGGCT+GGG 0.386622 2_3:-59404426 None:intergenic
GCATTCCTCGATTTGGCTTA+GGG 0.397216 2_3:-59405078 None:intergenic
ATAGACCACATTCAGAATTT+GGG 0.398472 2_3:-59405047 None:intergenic
AGGTAAGAGGAGTGGGCTGG+GGG 0.399364 2_3:-59404424 None:intergenic
AGACTAGAAATAGCGCAAAT+TGG 0.405425 2_3:-59405104 None:intergenic
GAAAGCAATTGAGCCATTGC+AGG 0.407579 2_3:-59404133 None:intergenic
GGAAGTAGCTAGGTTGTCTT+GGG 0.419743 2_3:+59400809 Msa0302580:CDS
AGTAGCTAGGTTGTCTTGGG+TGG 0.421499 2_3:+59400812 Msa0302580:CDS
AGCATTCCTCGATTTGGCTT+AGG 0.427721 2_3:-59405079 None:intergenic
ACTTGAATAAAGTTAAGAAA+TGG 0.434491 2_3:-59405181 None:intergenic
ACTTCACCTGGGCAGGTAAG+AGG 0.436789 2_3:-59404437 None:intergenic
GCTATATCCCACCCTCTCAT+AGG 0.437293 2_3:-59404346 None:intergenic
CCCACTCCTCTTACCTGCCC+AGG 0.466732 2_3:+59404431 Msa0302580:CDS
TTGTGTCGCAATTGCTGGAT+CGG 0.468844 2_3:+59401549 Msa0302580:CDS
TTCAAGAACTTCACCTGGGC+AGG 0.478299 2_3:-59404444 None:intergenic
AAAAGCATCAGTCTTTCCTT+AGG 0.478944 2_3:-59404972 None:intergenic
TTCAGTTGGTTATCAAGAAA+CGG 0.480345 2_3:-59404399 None:intergenic
TGAAGCAGAAGCAGTTGATC+TGG 0.483304 2_3:+59404567 Msa0302580:CDS
TGGTATTCATCGTGAGTTCA+TGG 0.483816 2_3:+59404948 Msa0302580:CDS
GTCTTCACTTATGATGCTGT+TGG 0.484095 2_3:+59404321 Msa0302580:CDS
GAGGGTGGGATATAGCTCTC+AGG 0.498734 2_3:+59404353 Msa0302580:CDS
AGTGTGAGTAATATGCAATC+AGG 0.502783 2_3:+59405285 Msa0302580:three_prime_UTR
ACGAGTGAGGATGTTGTAAC+CGG 0.515362 2_3:-59401608 None:intergenic
AGGAGTGCTACCAATTGTCC+TGG 0.523933 2_3:+59405305 Msa0302580:three_prime_UTR
GCAGATGAGCTGCCCTGCAA+TGG 0.526195 2_3:+59404120 Msa0302580:CDS
AAGGGTGGGACTGCTCTTTG+GGG 0.528923 2_3:+59400787 Msa0302580:CDS
AACACATTGAAAGAATAGTA+AGG 0.535290 2_3:-59404184 None:intergenic
CCTGGGCAGGTAAGAGGAGT+GGG 0.542041 2_3:-59404431 None:intergenic
CAAGCCGTCCTATTAAGATC+AGG 0.545554 2_3:+59404765 Msa0302580:CDS
GTAGCTAGGTTGTCTTGGGT+GGG 0.545902 2_3:+59400813 Msa0302580:CDS
TGCTTCAGACAGTGGAGTAA+CGG 0.553618 2_3:-59404551 None:intergenic
ATCGTGAGTTCATGGACCTA+AGG 0.553653 2_3:+59404956 Msa0302580:CDS
ATCCCAAATGAAACTAACTC+TGG 0.560765 2_3:+59405253 Msa0302580:three_prime_UTR
AATCTCGTGACTGTGAATGC+AGG 0.564776 2_3:+59404795 Msa0302580:CDS
ATGCTGTTGGTTCCTATGAG+AGG 0.566800 2_3:+59404334 Msa0302580:CDS
TGATGTGAAGGCTTTGCAGA+AGG 0.566876 2_3:+59402690 Msa0302580:CDS
ATTCCTCGATTTGGCTTAGG+GGG 0.570869 2_3:-59405076 None:intergenic
ACCTGGGCAGGTAAGAGGAG+TGG 0.577674 2_3:-59404432 None:intergenic
ATTAGCGTGTTGTTTAGTCA+TGG 0.578211 2_3:-59401356 None:intergenic
ACCGCCTGATCTTAATAGGA+CGG 0.578561 2_3:-59404769 None:intergenic
CTCCATATGACAACAATGGA+GGG 0.584655 2_3:+59401383 Msa0302580:CDS
GTGTGATCGCAGCTGATACA+AGG 0.586277 2_3:+59401578 Msa0302580:CDS
TATTCTTTCAATGTGTTGGG+CGG 0.587319 2_3:+59404190 Msa0302580:CDS
GAAATTGTCATCCTAAATGC+TGG 0.591622 2_3:+59404925 Msa0302580:CDS
ACTGCTTCTGCTTCAGACAG+TGG 0.591728 2_3:-59404559 None:intergenic
TCTTCCAATATGAATACTTG+TGG 0.596982 2_3:+59400720 None:intergenic
AGGGTGGGATATAGCTCTCA+GGG 0.602013 2_3:+59404354 Msa0302580:CDS
AAAGCAATTGAGCCATTGCA+GGG 0.602125 2_3:-59404132 None:intergenic
TGTTGGTTCCTATGAGAGGG+TGG 0.605372 2_3:+59404338 Msa0302580:CDS
AAGAAACGGCATAATGAGAG+TGG 0.608965 2_3:-59404385 None:intergenic
ATAGCTCACCTTCACTGTCA+AGG 0.612785 2_3:-59404213 None:intergenic
GTGCTCCCAAATTCTGAATG+TGG 0.619004 2_3:+59405042 Msa0302580:three_prime_UTR
TGCTGTTGGTTCCTATGAGA+GGG 0.619026 2_3:+59404335 Msa0302580:CDS
CATTCCTCGATTTGGCTTAG+GGG 0.623599 2_3:-59405077 None:intergenic
TCTCCATATGACAACAATGG+AGG 0.635572 2_3:+59401382 Msa0302580:CDS
AGTGAGGATGTTGTAACCGG+TGG 0.639435 2_3:-59401605 None:intergenic
ATCTCGTGACTGTGAATGCA+GGG 0.639560 2_3:+59404796 Msa0302580:CDS
GTTGGTTCCTATGAGAGGGT+GGG 0.639673 2_3:+59404339 Msa0302580:CDS
TGGTCTCCATATGACAACAA+TGG 0.646174 2_3:+59401379 Msa0302580:CDS
GCTGATACAAGGATGTCCAC+CGG 0.646826 2_3:+59401589 Msa0302580:CDS
AGGGTGGGACTGCTCTTTGG+GGG 0.654427 2_3:+59400788 Msa0302580:CDS
TTGGGCGGCCTTGACAGTGA+AGG 0.657648 2_3:+59404205 Msa0302580:CDS
CAGAGCTGAGAAATGTGTGA+TGG 0.663843 2_3:+59402648 Msa0302580:intron
GCCGTCCTATTAAGATCAGG+CGG 0.667143 2_3:+59404768 Msa0302580:CDS
TTGTGGTGCTGTGAAATGTG+TGG 0.674693 2_3:+59400737 Msa0302580:CDS
ATTGTCATCCTAAATGCTGG+TGG 0.706189 2_3:+59404928 Msa0302580:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! ATATATATATATATATATAT+AGG + chr2_3:59401683-59401702 Msa0302580:intron 0.0%
!! TATATATATATATATATATA+GGG + chr2_3:59401684-59401703 Msa0302580:intron 0.0%
!! AAAAAAAAAAAAAAAAAAAA+CGG - chr2_3:59401985-59402004 None:intergenic 0.0%
!! ATATATATATATTATATATA+GGG - chr2_3:59402428-59402447 None:intergenic 0.0%
!! TATATATATATATTATATAT+AGG - chr2_3:59402429-59402448 None:intergenic 0.0%
!! ATTGAAAAATATTAAAACAA+GGG - chr2_3:59401494-59401513 None:intergenic 10.0%
!! AATTGAAAAATATTAAAACA+AGG - chr2_3:59401495-59401514 None:intergenic 10.0%
!! AAAAAAAAAAAAAAAAAACG+GGG - chr2_3:59401983-59402002 None:intergenic 10.0%
!! TTGAAAAATATTAAAACAAG+GGG - chr2_3:59401493-59401512 None:intergenic 15.0%
!!! ATATATATATTAAGTTGTGT+TGG - chr2_3:59401673-59401692 None:intergenic 15.0%
!! AAAAAAAAAAAAAAAAACGG+GGG - chr2_3:59401982-59402001 None:intergenic 15.0%
!! AGAATTAATTAATCGATAAA+AGG - chr2_3:59402138-59402157 None:intergenic 15.0%
!! TTATTTATTTATCTGTTACA+AGG - chr2_3:59402756-59402775 None:intergenic 15.0%
!!! TAACTTTTATATAGAAAAGA+TGG - chr2_3:59403678-59403697 None:intergenic 15.0%
!! TATGCAAAACAAATAAAATT+AGG - chr2_3:59403735-59403754 None:intergenic 15.0%
!!! TTATCATTTCTTTACAATTT+TGG - chr2_3:59403821-59403840 None:intergenic 15.0%
!!! TAAATCATATTTTAATGTAG+AGG - chr2_3:59404521-59404540 None:intergenic 15.0%
!! ATTAAAATATGATTTATTGC+AGG + chr2_3:59404525-59404544 Msa0302580:intron 15.0%
!!! TGATGATGATATTCAAATTT+TGG + chr2_3:59400761-59400780 Msa0302580:CDS 20.0%
!!! TATTTTTGGTTTTTTTCTCA+TGG + chr2_3:59400845-59400864 Msa0302580:intron 20.0%
!! CATATCCAGATAAAAATTTA+GGG - chr2_3:59400915-59400934 None:intergenic 20.0%
!! TCATATCCAGATAAAAATTT+AGG - chr2_3:59400916-59400935 None:intergenic 20.0%
!!! CTTTGATTTTTTGTTTGATT+TGG + chr2_3:59400972-59400991 Msa0302580:intron 20.0%
!!! AAGAATTCTGATTTGTATTT+TGG + chr2_3:59401071-59401090 Msa0302580:intron 20.0%
!! TTTCAGTTGTAGTTATATTA+TGG + chr2_3:59401115-59401134 Msa0302580:intron 20.0%
!!! ATATTATGGTTTGTGATAAT+TGG + chr2_3:59401129-59401148 Msa0302580:intron 20.0%
!! TGAAAAATATTAAAACAAGG+GGG - chr2_3:59401492-59401511 None:intergenic 20.0%
!! AAACGTAAAACCTAATTATT+TGG - chr2_3:59401928-59401947 None:intergenic 20.0%
!!! ACAATTTTATGCATGATAAT+TGG - chr2_3:59402107-59402126 None:intergenic 20.0%
!! AATCTAATCTGGTAATTAAT+TGG + chr2_3:59402236-59402255 Msa0302580:intron 20.0%
!!! GATTTTGTATATCAATTACA+CGG + chr2_3:59402315-59402334 Msa0302580:intron 20.0%
!! AAGGAAATAATTAAATCTGA+TGG + chr2_3:59402346-59402365 Msa0302580:intron 20.0%
!! ACAATAATAGAAAACCAATT+GGG - chr2_3:59402499-59402518 None:intergenic 20.0%
!! TACAATAATAGAAAACCAAT+TGG - chr2_3:59402500-59402519 None:intergenic 20.0%
!! TATTATTGTAAAACTTCTAG+TGG + chr2_3:59402510-59402529 Msa0302580:intron 20.0%
!! ATTATTGTAAAACTTCTAGT+GGG + chr2_3:59402511-59402530 Msa0302580:intron 20.0%
!! ATAAACACAACTAAAAAAAG+AGG - chr2_3:59402570-59402589 None:intergenic 20.0%
!! TTTAGATTGTAAACATATTC+AGG + chr2_3:59402781-59402800 Msa0302580:intron 20.0%
!! TAGTTAGTTACATAGTTATT+TGG + chr2_3:59403275-59403294 Msa0302580:intron 20.0%
!! ATAGAGTATGTGTATAAATT+AGG + chr2_3:59403305-59403324 Msa0302580:intron 20.0%
!! ATTAAGAAAATAAGAAAGAC+CGG - chr2_3:59403432-59403451 None:intergenic 20.0%
!! AAAATAAATATAGAGGTGAA+TGG - chr2_3:59403538-59403557 None:intergenic 20.0%
!! GAACATCAAAATAAATATAG+AGG - chr2_3:59403545-59403564 None:intergenic 20.0%
!! AAAAATAGTCCAATAAGTAT+AGG - chr2_3:59403598-59403617 None:intergenic 20.0%
!! TATAGAAACATTAGAAAAGA+GGG - chr2_3:59403626-59403645 None:intergenic 20.0%
!! TTATAGAAACATTAGAAAAG+AGG - chr2_3:59403627-59403646 None:intergenic 20.0%
!! TTTGGATATACAATTATACT+TGG - chr2_3:59403803-59403822 None:intergenic 20.0%
!!! TTAGATGTTAGTTTGAAATT+TGG + chr2_3:59403952-59403971 Msa0302580:intron 20.0%
!!! AGTTTGTTTATGTATGAAAA+CGG + chr2_3:59404637-59404656 Msa0302580:intron 20.0%
!! CAAAATGACAATTATGTAAA+AGG - chr2_3:59404848-59404867 None:intergenic 20.0%
!! ACTTGAATAAAGTTAAGAAA+TGG - chr2_3:59405184-59405203 None:intergenic 20.0%
!! ATATTCAAATTTTGGACGAA+GGG + chr2_3:59400769-59400788 Msa0302580:CDS 25.0%
!!! TCTTCGATTGTTATTTGATT+TGG + chr2_3:59400939-59400958 Msa0302580:intron 25.0%
! AAAAATATTAAAACAAGGGG+GGG - chr2_3:59401490-59401509 None:intergenic 25.0%
! GAAAAATATTAAAACAAGGG+GGG - chr2_3:59401491-59401510 None:intergenic 25.0%
! TCGTTTCTCATATAAGATAT+TGG - chr2_3:59402385-59402404 None:intergenic 25.0%
! AATTGGAACGATTATCAATT+TGG - chr2_3:59402090-59402109 None:intergenic 25.0%
! AAAAAATTGAGCTACAATCT+TGG - chr2_3:59402288-59402307 None:intergenic 25.0%
! TCGTTTCTCATATAAGATAT+TGG + chr2_3:59402385-59402404 Msa0302580:intron 25.0%
! TTATTGTAAAACTTCTAGTG+GGG + chr2_3:59402512-59402531 Msa0302580:intron 25.0%
! TAACAAATAGAGAGGTTAAA+AGG - chr2_3:59402969-59402988 None:intergenic 25.0%
! AGTTATGTTAACAAATAGAG+AGG - chr2_3:59402977-59402996 None:intergenic 25.0%
!!! GTTAAATGTTGCTTTGATTT+GGG + chr2_3:59403040-59403059 Msa0302580:intron 25.0%
! TATAAATTAGGAGAACACAA+AGG + chr2_3:59403317-59403336 Msa0302580:intron 25.0%
! ATAAATTAGGAGAACACAAA+GGG + chr2_3:59403318-59403337 Msa0302580:intron 25.0%
! AATATCGTAAAGTTTGTGAA+TGG + chr2_3:59403357-59403376 Msa0302580:intron 25.0%
! TTAAGAAAATAAGAAAGACC+GGG - chr2_3:59403431-59403450 None:intergenic 25.0%
! ATAGAAACATTAGAAAAGAG+GGG - chr2_3:59403625-59403644 None:intergenic 25.0%
! GTATAAACTTCTATAAAGGT+GGG - chr2_3:59403711-59403730 None:intergenic 25.0%
! AGTATAAACTTCTATAAAGG+TGG - chr2_3:59403712-59403731 None:intergenic 25.0%
!! AGGAGTATAAACTTCTATAA+AGG - chr2_3:59403715-59403734 None:intergenic 25.0%
! ATTGTAAAGAAATGATAAGC+AGG + chr2_3:59403823-59403842 Msa0302580:intron 25.0%
! ATCTAACAACGTAATTGATA+AGG - chr2_3:59403938-59403957 None:intergenic 25.0%
!! TTTGAAATTTGGTGAAATTG+TGG + chr2_3:59403963-59403982 Msa0302580:intron 25.0%
! CAAGGTAATATTCAAAACAA+TGG - chr2_3:59404026-59404045 None:intergenic 25.0%
!! GAAGCTTTAATTATTTGTCA+AGG - chr2_3:59404044-59404063 None:intergenic 25.0%
! AACACATTGAAAGAATAGTA+AGG - chr2_3:59404187-59404206 None:intergenic 25.0%
! TTACTATTCTTTCAATGTGT+TGG + chr2_3:59404186-59404205 Msa0302580:CDS 25.0%
! TACTATTCTTTCAATGTGTT+GGG + chr2_3:59404187-59404206 Msa0302580:CDS 25.0%
!!! GTGTTTTTCTTGAAGTATTT+TGG + chr2_3:59404470-59404489 Msa0302580:intron 25.0%
!!! CATAATTGTCATTTTGCATT+AGG + chr2_3:59404852-59404871 Msa0302580:intron 25.0%
!! TTTTACTTCTGTATTTGCAT+CGG + chr2_3:59405151-59405170 Msa0302580:three_prime_UTR 25.0%
! GATATTCAAATTTTGGACGA+AGG + chr2_3:59400768-59400787 Msa0302580:CDS 30.0%
!!! TGATGGTAGTTATTTTTGTG+TGG + chr2_3:59400883-59400902 Msa0302580:intron 30.0%
TCCAGATAAAAATTTAGGGA+GGG - chr2_3:59400911-59400930 None:intergenic 30.0%
ATCCAGATAAAAATTTAGGG+AGG - chr2_3:59400912-59400931 None:intergenic 30.0%
!! ATTTGGTTAGTTTGTCCATT+TGG + chr2_3:59400989-59401008 Msa0302580:intron 30.0%
!! TGTATTTTGGATTGCTAAGT+TGG + chr2_3:59401084-59401103 Msa0302580:intron 30.0%
! ATTTTTCCAGAGCTCTATAT+TGG - chr2_3:59401157-59401176 None:intergenic 30.0%
AAATGATATACAGGATGGTT+TGG - chr2_3:59401201-59401220 None:intergenic 30.0%
AAACCATCCTGTATATCATT+TGG + chr2_3:59401200-59401219 Msa0302580:intron 30.0%
AACCATCCTGTATATCATTT+GGG + chr2_3:59401201-59401220 Msa0302580:intron 30.0%
AAACTACCCAAATGATATAC+AGG - chr2_3:59401210-59401229 None:intergenic 30.0%
TGTATATCATTTGGGTAGTT+TGG + chr2_3:59401209-59401228 Msa0302580:intron 30.0%
CAAGATGAAGAATAGTGTAA+TGG - chr2_3:59401300-59401319 None:intergenic 30.0%
! TGTTGTTTAGTCATGGTAAA+TGG - chr2_3:59401352-59401371 None:intergenic 30.0%
AAAATATTAAAACAAGGGGG+GGG - chr2_3:59401489-59401508 None:intergenic 30.0%
! ATATATATAGGGAGCATATC+CGG + chr2_3:59401729-59401748 Msa0302580:intron 30.0%
!! TATAAGATATTGGTTCTCAC+CGG - chr2_3:59401751-59401770 None:intergenic 30.0%
GAAACGAGAACTATCTATAT+CGG + chr2_3:59401774-59401793 Msa0302580:intron 30.0%
TTCCTCTTCTCCAAATAATT+AGG + chr2_3:59401915-59401934 Msa0302580:intron 30.0%
AACCTAATTATTTGGAGAAG+AGG - chr2_3:59401920-59401939 None:intergenic 30.0%
! CAAGATTGAGAAATTTCTAG+CGG - chr2_3:59402057-59402076 None:intergenic 30.0%
! AAAGGTTTGAGATTTGGAAA+TGG + chr2_3:59402181-59402200 Msa0302580:intron 30.0%
! AGAAAGCGTAAAATCTAATC+TGG + chr2_3:59402225-59402244 Msa0302580:intron 30.0%
! CAATTACACGGTATGTTTTA+AGG + chr2_3:59402327-59402346 Msa0302580:intron 30.0%
ATATATTGCTGAAACCCAAT+TGG + chr2_3:59402482-59402501 Msa0302580:intron 30.0%
! CAAGTCTAAACTAGGTTTTT+GGG + chr2_3:59402605-59402624 Msa0302580:intron 30.0%
! AAGTCTAAACTAGGTTTTTG+GGG + chr2_3:59402606-59402625 Msa0302580:intron 30.0%
TGTAAACATATTCAGGAAAC+AGG + chr2_3:59402788-59402807 Msa0302580:intron 30.0%
GTAAACATATTCAGGAAACA+GGG + chr2_3:59402789-59402808 Msa0302580:intron 30.0%
ACAAACAGAACAAAAACACA+AGG - chr2_3:59402854-59402873 None:intergenic 30.0%
! TCACTATGTTGATTACTTGT+TGG + chr2_3:59402879-59402898 Msa0302580:intron 30.0%
! TTGATTACTTGTTGGAAAGT+TGG + chr2_3:59402887-59402906 Msa0302580:intron 30.0%
!! GGTTAAATGTTGCTTTGATT+TGG + chr2_3:59403039-59403058 Msa0302580:intron 30.0%
ATTCTATATACCGAGAAAAG+AGG - chr2_3:59403169-59403188 None:intergenic 30.0%
GTAACACATTATGTCATGAT+GGG - chr2_3:59403214-59403233 None:intergenic 30.0%
TACATGACATGCATTATGTT+AGG - chr2_3:59403491-59403510 None:intergenic 30.0%
! ATGTCATGTATTGAGTTGTA+AGG + chr2_3:59403501-59403520 Msa0302580:intron 30.0%
!! TTCTGCACTAGTATTTTTGT+TGG + chr2_3:59403562-59403581 Msa0302580:intron 30.0%
! CTCCTTTTACCTATACTTAT+TGG + chr2_3:59403586-59403605 Msa0302580:intron 30.0%
GTCCAATAAGTATAGGTAAA+AGG - chr2_3:59403591-59403610 None:intergenic 30.0%
TATTCAAAACAATGGAAGCA+TGG - chr2_3:59404018-59404037 None:intergenic 30.0%
GAGCAAGCAAATACAAAAAT+GGG - chr2_3:59404265-59404284 None:intergenic 30.0%
AGAGCAAGCAAATACAAAAA+TGG - chr2_3:59404266-59404285 None:intergenic 30.0%
CTTCAACTTCAACCTAAAAT+AGG + chr2_3:59404288-59404307 Msa0302580:intron 30.0%
ACTTCAACCTAAAATAGGAA+AGG + chr2_3:59404293-59404312 Msa0302580:intron 30.0%
CTTCAACCTAAAATAGGAAA+GGG + chr2_3:59404294-59404313 Msa0302580:intron 30.0%
TTCAGTTGGTTATCAAGAAA+CGG - chr2_3:59404402-59404421 None:intergenic 30.0%
TAAACACTACAGTCAAAATG+TGG - chr2_3:59404720-59404739 None:intergenic 30.0%
!!! GTATTTTGACTTTGCAAAAC+AGG - chr2_3:59404746-59404765 None:intergenic 30.0%
!! ACAAGCTTTAAACTTGCTTT+GGG + chr2_3:59404875-59404894 Msa0302580:intron 30.0%
!! TTTGGGTGTATGTTTTTACA+GGG + chr2_3:59404892-59404911 Msa0302580:intron 30.0%
ATAGACCACATTCAGAATTT+GGG - chr2_3:59405050-59405069 None:intergenic 30.0%
!!! GTGGGTGGGAATTTTATTTT+TGG + chr2_3:59400831-59400850 Msa0302580:intron 35.0%
!!! TTGGTTTTTTTCTCATGGCT+TGG + chr2_3:59400850-59400869 Msa0302580:intron 35.0%
! TCCCTCCCTAAATTTTTATC+TGG + chr2_3:59400907-59400926 Msa0302580:intron 35.0%
!!! GTTCATTGCCTCTGTTTTTT+TGG + chr2_3:59401025-59401044 Msa0302580:intron 35.0%
!! ATATACAGGATGGTTTGGTT+CGG - chr2_3:59401196-59401215 None:intergenic 35.0%
TACCCAAATGATATACAGGA+TGG - chr2_3:59401206-59401225 None:intergenic 35.0%
! GAATAGTGTAATGGAGATGA+GGG - chr2_3:59401291-59401310 None:intergenic 35.0%
! AGAATAGTGTAATGGAGATG+AGG - chr2_3:59401292-59401311 None:intergenic 35.0%
TTAGTCATGGTAAATGGAAC+TGG - chr2_3:59401346-59401365 None:intergenic 35.0%
!! ATTAGCGTGTTGTTTAGTCA+TGG - chr2_3:59401359-59401378 None:intergenic 35.0%
TGACTAAACAACACGCTAAT+TGG + chr2_3:59401359-59401378 Msa0302580:CDS 35.0%
! AGCTTACAAGTGAGAGATTT+TGG - chr2_3:59401641-59401660 None:intergenic 35.0%
AACAAATCGAGCTACAATCT+TGG + chr2_3:59401876-59401895 Msa0302580:intron 35.0%
CTTTCTTGAAAGAGAGCAAA+AGG - chr2_3:59402024-59402043 None:intergenic 35.0%
! GAACGATTATCAATTTGGTG+AGG - chr2_3:59402085-59402104 None:intergenic 35.0%
!! TAGTGTTACTTGCTGATTTG+AGG + chr2_3:59402157-59402176 Msa0302580:intron 35.0%
!! TACTTGCTGATTTGAGGAAA+AGG + chr2_3:59402163-59402182 Msa0302580:intron 35.0%
! TGAGGAAAAGGTTTGAGATT+TGG + chr2_3:59402175-59402194 Msa0302580:intron 35.0%
AAAGATGCCAAGTCTAAACT+AGG + chr2_3:59402597-59402616 Msa0302580:intron 35.0%
CCAAAAACCTAGTTTAGACT+TGG - chr2_3:59402607-59402626 None:intergenic 35.0%
! CCAAGTCTAAACTAGGTTTT+TGG + chr2_3:59402604-59402623 Msa0302580:intron 35.0%
!! TAAACTGAGAGTATTCCTCT+AGG + chr2_3:59403017-59403036 Msa0302580:intron 35.0%
!! AAACTGAGAGTATTCCTCTA+GGG + chr2_3:59403018-59403037 Msa0302580:intron 35.0%
AAAGCAACATTTAACCCTAG+AGG - chr2_3:59403035-59403054 None:intergenic 35.0%
GGTTTATTTATAGACTGCCA+TGG + chr2_3:59403133-59403152 Msa0302580:intron 35.0%
! TAACCGAAAACCTCTTTTCT+CGG + chr2_3:59403156-59403175 Msa0302580:intron 35.0%
! ATACCGAGAAAAGAGGTTTT+CGG - chr2_3:59403162-59403181 None:intergenic 35.0%
CGTAACACATTATGTCATGA+TGG - chr2_3:59403215-59403234 None:intergenic 35.0%
TTTCTATTCCATTCAGCTCT+TGG + chr2_3:59403462-59403481 Msa0302580:intron 35.0%
TTCTATTCCATTCAGCTCTT+GGG + chr2_3:59403463-59403482 Msa0302580:intron 35.0%
AAGATCGTGGACATGTTTAA+AGG - chr2_3:59403653-59403672 None:intergenic 35.0%
AGAAATGATAAGCAGGATTG+AGG + chr2_3:59403830-59403849 Msa0302580:intron 35.0%
GAAATGATAAGCAGGATTGA+GGG + chr2_3:59403831-59403850 Msa0302580:intron 35.0%
AAATGATAAGCAGGATTGAG+GGG + chr2_3:59403832-59403851 Msa0302580:intron 35.0%
ATTGAGGGGAAAGTAAAAAC+TGG + chr2_3:59403846-59403865 Msa0302580:intron 35.0%
TATTCTTTCAATGTGTTGGG+CGG + chr2_3:59404190-59404209 Msa0302580:CDS 35.0%
! ACACATCCCTTTCCTATTTT+AGG - chr2_3:59404303-59404322 None:intergenic 35.0%
CACATTCATACTTGCAGAAT+TGG + chr2_3:59404674-59404693 Msa0302580:intron 35.0%
ATTTCGACTGCAGAAAATTG+TGG + chr2_3:59404821-59404840 Msa0302580:intron 35.0%
!! GACAAGCTTTAAACTTGCTT+TGG + chr2_3:59404874-59404893 Msa0302580:intron 35.0%
!! CTTTGGGTGTATGTTTTTAC+AGG + chr2_3:59404891-59404910 Msa0302580:intron 35.0%
!! TTGGGTGTATGTTTTTACAG+GGG + chr2_3:59404893-59404912 Msa0302580:intron 35.0%
!! TATGTTTTTACAGGGGGATA+AGG + chr2_3:59404900-59404919 Msa0302580:intron 35.0%
GAAATTGTCATCCTAAATGC+TGG + chr2_3:59404925-59404944 Msa0302580:CDS 35.0%
!! AAAAGCATCAGTCTTTCCTT+AGG - chr2_3:59404975-59404994 None:intergenic 35.0%
! AAAGACTGATGCTTTTACAG+AGG + chr2_3:59404979-59404998 Msa0302580:exon 35.0%
!! AGACTTGTTCTGAGAATGTT+TGG + chr2_3:59405018-59405037 Msa0302580:three_prime_UTR 35.0%
CATAGACCACATTCAGAATT+TGG - chr2_3:59405051-59405070 None:intergenic 35.0%
AGACTAGAAATAGCGCAAAT+TGG - chr2_3:59405107-59405126 None:intergenic 35.0%
ATCCCAAATGAAACTAACTC+TGG + chr2_3:59405253-59405272 Msa0302580:three_prime_UTR 35.0%
! AGCCAGAGTTAGTTTCATTT+GGG - chr2_3:59405258-59405277 None:intergenic 35.0%
! AAGCCAGAGTTAGTTTCATT+TGG - chr2_3:59405259-59405278 None:intergenic 35.0%
AGTGTGAGTAATATGCAATC+AGG + chr2_3:59405285-59405304 Msa0302580:three_prime_UTR 35.0%
GAAAAAATGTCCAGGACAAT+TGG - chr2_3:59405318-59405337 None:intergenic 35.0%
! TTCAAATTTTGGACGAAGGG+TGG + chr2_3:59400772-59400791 Msa0302580:CDS 40.0%
! TCAAATTTTGGACGAAGGGT+GGG + chr2_3:59400773-59400792 Msa0302580:CDS 40.0%
!! TTTTCTCATGGCTTGGATGT+TGG + chr2_3:59400857-59400876 Msa0302580:intron 40.0%
ACTTAGCAACTCAAGCCAAA+TGG - chr2_3:59401007-59401026 None:intergenic 40.0%
GCACTTCACCAAAAAAACAG+AGG - chr2_3:59401036-59401055 None:intergenic 40.0%
! ATGGAGATGAGGGTATACAA+GGG - chr2_3:59401281-59401300 None:intergenic 40.0%
! AATGGAGATGAGGGTATACA+AGG - chr2_3:59401282-59401301 None:intergenic 40.0%
TGGTCTCCATATGACAACAA+TGG + chr2_3:59401379-59401398 Msa0302580:CDS 40.0%
TCTCCATATGACAACAATGG+AGG + chr2_3:59401382-59401401 Msa0302580:CDS 40.0%
CTCCATATGACAACAATGGA+GGG + chr2_3:59401383-59401402 Msa0302580:CDS 40.0%
TACCCTCCATTGTTGTCATA+TGG - chr2_3:59401388-59401407 None:intergenic 40.0%
!!! TTTTGGAGTAATCACGAGTG+AGG - chr2_3:59401624-59401643 None:intergenic 40.0%
AAATGTGTGATGGCTTCTTC+TGG + chr2_3:59402658-59402677 Msa0302580:CDS 40.0%
!! TGGTTTTCAAGCTGATGTGA+AGG + chr2_3:59402678-59402697 Msa0302580:CDS 40.0%
AACATATTCAGGAAACAGGG+TGG + chr2_3:59402792-59402811 Msa0302580:intron 40.0%
! AAGCAGTGTTGAGCATTTGA+TGG + chr2_3:59403112-59403131 Msa0302580:intron 40.0%
! AAAGAGGTTTTCGGTTACCA+TGG - chr2_3:59403153-59403172 None:intergenic 40.0%
AGTAGCAACTCTAATGCGAA+GGG + chr2_3:59403380-59403399 Msa0302580:intron 40.0%
AGAAAAGATGGCAAAGATCG+TGG - chr2_3:59403666-59403685 None:intergenic 40.0%
! CAAAACAATGGAAGCATGGA+AGG - chr2_3:59404014-59404033 None:intergenic 40.0%
AAAGCAATTGAGCCATTGCA+GGG - chr2_3:59404135-59404154 None:intergenic 40.0%
GTCTTCACTTATGATGCTGT+TGG + chr2_3:59404321-59404340 Msa0302580:CDS 40.0%
AAGAAACGGCATAATGAGAG+TGG - chr2_3:59404388-59404407 None:intergenic 40.0%
CCAATTCAAGAACTTCACCT+GGG - chr2_3:59404451-59404470 None:intergenic 40.0%
ACCAATTCAAGAACTTCACC+TGG - chr2_3:59404452-59404471 None:intergenic 40.0%
CTGCAAGTATGAATGTGTGA+TGG - chr2_3:59404671-59404690 None:intergenic 40.0%
TTCAACCGCCTGATCTTAAT+AGG - chr2_3:59404776-59404795 None:intergenic 40.0%
!! TGGGTGTATGTTTTTACAGG+GGG + chr2_3:59404894-59404913 Msa0302580:intron 40.0%
ATTGTCATCCTAAATGCTGG+TGG + chr2_3:59404928-59404947 Msa0302580:CDS 40.0%
GATGAATACCACCAGCATTT+AGG - chr2_3:59404939-59404958 None:intergenic 40.0%
TGGTATTCATCGTGAGTTCA+TGG + chr2_3:59404948-59404967 Msa0302580:CDS 40.0%
!! TTGGAAAGCATTCCTCGATT+TGG - chr2_3:59405088-59405107 None:intergenic 40.0%
!! TTGTGGTGCTGTGAAATGTG+TGG + chr2_3:59400737-59400756 Msa0302580:CDS 45.0%
GGAAGTAGCTAGGTTGTCTT+GGG + chr2_3:59400809-59400828 Msa0302580:CDS 45.0%
TTGGAGCCAATATAGAGCTC+TGG + chr2_3:59401148-59401167 Msa0302580:intron 45.0%
! TGGGTAGTTTGGTTCGTGTA+AGG + chr2_3:59401220-59401239 Msa0302580:intron 45.0%
AGATCTTGTGTCGCAATTGC+TGG + chr2_3:59401544-59401563 Msa0302580:intron 45.0%
TTGTGTCGCAATTGCTGGAT+CGG + chr2_3:59401549-59401568 Msa0302580:CDS 45.0%
ACGAGTGAGGATGTTGTAAC+CGG - chr2_3:59401611-59401630 None:intergenic 45.0%
CAGAGCTGAGAAATGTGTGA+TGG + chr2_3:59402648-59402667 Msa0302580:intron 45.0%
TGATGTGAAGGCTTTGCAGA+AGG + chr2_3:59402690-59402709 Msa0302580:CDS 45.0%
!! TGCAGAAGGTTTTGTCTGCT+AGG + chr2_3:59402704-59402723 Msa0302580:CDS 45.0%
!! GGTTTTGTCTGCTAGGCATT+TGG + chr2_3:59402711-59402730 Msa0302580:CDS 45.0%
GAGTAGCAACTCTAATGCGA+AGG + chr2_3:59403379-59403398 Msa0302580:intron 45.0%
GTAGCAACTCTAATGCGAAG+GGG + chr2_3:59403381-59403400 Msa0302580:intron 45.0%
TAATGCGAAGGGGAAACTCT+TGG + chr2_3:59403391-59403410 Msa0302580:intron 45.0%
TTGGAGGAGAGATTATCTCC+CGG + chr2_3:59403410-59403429 Msa0302580:intron 45.0%
TTAGGAACCCAAGAGCTGAA+TGG - chr2_3:59403473-59403492 None:intergenic 45.0%
GAAAGCAATTGAGCCATTGC+AGG - chr2_3:59404136-59404155 None:intergenic 45.0%
ATAGCTCACCTTCACTGTCA+AGG - chr2_3:59404216-59404235 None:intergenic 45.0%
!! ATGCTGTTGGTTCCTATGAG+AGG + chr2_3:59404334-59404353 Msa0302580:CDS 45.0%
!! TGCTGTTGGTTCCTATGAGA+GGG + chr2_3:59404335-59404354 Msa0302580:CDS 45.0%
CCCAGGTGAAGTTCTTGAAT+TGG + chr2_3:59404448-59404467 Msa0302580:intron 45.0%
TGCTTCAGACAGTGGAGTAA+CGG - chr2_3:59404554-59404573 None:intergenic 45.0%
TGAAGCAGAAGCAGTTGATC+TGG + chr2_3:59404567-59404586 Msa0302580:CDS 45.0%
CAAGCCGTCCTATTAAGATC+AGG + chr2_3:59404765-59404784 Msa0302580:CDS 45.0%
ACCGCCTGATCTTAATAGGA+CGG - chr2_3:59404772-59404791 None:intergenic 45.0%
AATCTCGTGACTGTGAATGC+AGG + chr2_3:59404795-59404814 Msa0302580:CDS 45.0%
ATCTCGTGACTGTGAATGCA+GGG + chr2_3:59404796-59404815 Msa0302580:CDS 45.0%
ATCGTGAGTTCATGGACCTA+AGG + chr2_3:59404956-59404975 Msa0302580:CDS 45.0%
GTGCTCCCAAATTCTGAATG+TGG + chr2_3:59405042-59405061 Msa0302580:three_prime_UTR 45.0%
!! ATTCCTCGATTTGGCTTAGG+GGG - chr2_3:59405079-59405098 None:intergenic 45.0%
!! CATTCCTCGATTTGGCTTAG+GGG - chr2_3:59405080-59405099 None:intergenic 45.0%
!! GCATTCCTCGATTTGGCTTA+GGG - chr2_3:59405081-59405100 None:intergenic 45.0%
!! AGCATTCCTCGATTTGGCTT+AGG - chr2_3:59405082-59405101 None:intergenic 45.0%
!! AAAAAAAAAAAAAAAAAAAC+GGG - chr2_3:59401984-59402003 None:intergenic 5.0%
!! ATTAATATAACAAAATATTT+AGG - chr2_3:59405230-59405249 None:intergenic 5.0%
GGGAAGTAGCTAGGTTGTCT+TGG + chr2_3:59400808-59400827 Msa0302580:CDS 50.0%
AGTAGCTAGGTTGTCTTGGG+TGG + chr2_3:59400812-59400831 Msa0302580:CDS 50.0%
GTAGCTAGGTTGTCTTGGGT+GGG + chr2_3:59400813-59400832 Msa0302580:CDS 50.0%
GGCTTGGATGTTGGAGATGA+TGG + chr2_3:59400866-59400885 Msa0302580:intron 50.0%
!! GGATGGTTTGGTTCGGAATG+TGG - chr2_3:59401189-59401208 None:intergenic 50.0%
!! AGGGTATACAAGGGTGTCAC+GGG - chr2_3:59401272-59401291 None:intergenic 50.0%
!! GAGGGTATACAAGGGTGTCA+CGG - chr2_3:59401273-59401292 None:intergenic 50.0%
GTGTGATCGCAGCTGATACA+AGG + chr2_3:59401578-59401597 Msa0302580:CDS 50.0%
GCTGATACAAGGATGTCCAC+CGG + chr2_3:59401589-59401608 Msa0302580:CDS 50.0%
AGTGAGGATGTTGTAACCGG+TGG - chr2_3:59401608-59401627 None:intergenic 50.0%
!! TGTTGGTTCCTATGAGAGGG+TGG + chr2_3:59404338-59404357 Msa0302580:CDS 50.0%
! GTTGGTTCCTATGAGAGGGT+GGG + chr2_3:59404339-59404358 Msa0302580:CDS 50.0%
GCTATATCCCACCCTCTCAT+AGG - chr2_3:59404349-59404368 None:intergenic 50.0%
AGGGTGGGATATAGCTCTCA+GGG + chr2_3:59404354-59404373 Msa0302580:CDS 50.0%
GGATATAGCTCTCAGGGTTC+TGG + chr2_3:59404360-59404379 Msa0302580:CDS 50.0%
TTCAAGAACTTCACCTGGGC+AGG - chr2_3:59404447-59404466 None:intergenic 50.0%
ACTGCTTCTGCTTCAGACAG+TGG - chr2_3:59404562-59404581 None:intergenic 50.0%
GCCGTCCTATTAAGATCAGG+CGG + chr2_3:59404768-59404787 Msa0302580:CDS 50.0%
!! AGGAGTGCTACCAATTGTCC+TGG + chr2_3:59405305-59405324 Msa0302580:three_prime_UTR 50.0%
GAAGGGTGGGACTGCTCTTT+GGG + chr2_3:59400786-59400805 Msa0302580:CDS 55.0%
AAGGGTGGGACTGCTCTTTG+GGG + chr2_3:59400787-59400806 Msa0302580:CDS 55.0%
! GCTCTTTGGGGGAAGTAGCT+AGG + chr2_3:59400799-59400818 Msa0302580:CDS 55.0%
CTAGGTTGTCTTGGGTGGGT+GGG + chr2_3:59400817-59400836 Msa0302580:intron 55.0%
!! CAAGGGTGTCACGGGTGATA+GGG - chr2_3:59401264-59401283 None:intergenic 55.0%
!! ACAAGGGTGTCACGGGTGAT+AGG - chr2_3:59401265-59401284 None:intergenic 55.0%
AAAACAAGGGGGGGGAGAGA+GGG - chr2_3:59401481-59401500 None:intergenic 55.0%
TAAAACAAGGGGGGGGAGAG+AGG - chr2_3:59401482-59401501 None:intergenic 55.0%
TGCGAAGGGGAAACTCTTGG+AGG + chr2_3:59403394-59403413 Msa0302580:intron 55.0%
GAGGGTGGGATATAGCTCTC+AGG + chr2_3:59404353-59404372 Msa0302580:CDS 55.0%
ACTTCACCTGGGCAGGTAAG+AGG - chr2_3:59404440-59404459 None:intergenic 55.0%
TTGCCCCCTAAGCCAAATCG+AGG + chr2_3:59405073-59405092 Msa0302580:three_prime_UTR 55.0%
CGAAGGGTGGGACTGCTCTT+TGG + chr2_3:59400785-59400804 Msa0302580:CDS 60.0%
AGGGTGGGACTGCTCTTTGG+GGG + chr2_3:59400788-59400807 Msa0302580:CDS 60.0%
GCTAGGTTGTCTTGGGTGGG+TGG + chr2_3:59400816-59400835 Msa0302580:intron 60.0%
AGGGAGAGAGAGGGAGAGAG+GGG - chr2_3:59401462-59401481 None:intergenic 60.0%
GAGGGAGAGAGAGGGAGAGA+GGG - chr2_3:59401463-59401482 None:intergenic 60.0%
AGAGGGAGAGAGAGGGAGAG+AGG - chr2_3:59401464-59401483 None:intergenic 60.0%
GCAGATGAGCTGCCCTGCAA+TGG + chr2_3:59404120-59404139 Msa0302580:CDS 60.0%
TTGGGCGGCCTTGACAGTGA+AGG + chr2_3:59404205-59404224 Msa0302580:CDS 60.0%
!! AGGTAAGAGGAGTGGGCTGG+GGG - chr2_3:59404427-59404446 None:intergenic 60.0%
!! CAGGTAAGAGGAGTGGGCTG+GGG - chr2_3:59404428-59404447 None:intergenic 60.0%
! GCAGGTAAGAGGAGTGGGCT+GGG - chr2_3:59404429-59404448 None:intergenic 60.0%
CCTGGGCAGGTAAGAGGAGT+GGG - chr2_3:59404434-59404453 None:intergenic 60.0%
ACCTGGGCAGGTAAGAGGAG+TGG - chr2_3:59404435-59404454 None:intergenic 60.0%
GGGAGAGAGAGGGAGAGAGG+GGG - chr2_3:59401461-59401480 None:intergenic 65.0%
GGGGGAGAGAGGGAGAGAGA+GGG - chr2_3:59401471-59401490 None:intergenic 65.0%
!! GTGGGCTGGGGGACTTCAGT+TGG - chr2_3:59404416-59404435 None:intergenic 65.0%
GGCAGGTAAGAGGAGTGGGC+TGG - chr2_3:59404430-59404449 None:intergenic 65.0%
CCCACTCCTCTTACCTGCCC+AGG + chr2_3:59404431-59404450 Msa0302580:CDS 65.0%
GGGGGGAGAGAGGGAGAGAG+AGG - chr2_3:59401472-59401491 None:intergenic 70.0%
Chromosome Type Strat End Strand Name
chr2_3 gene 59400729 59405337 59400729 ID=Msa0302580;Name=Msa0302580
chr2_3 mRNA 59400729 59405337 59400729 ID=Msa0302580-mRNA-1;Parent=Msa0302580;Name=Msa0302580-mRNA-1;_AED=0.19;_eAED=0.19;_QI=0|0.62|0.77|0.77|1|1|9|350|290
chr2_3 exon 59400729 59400834 59400729 ID=Msa0302580-mRNA-1:exon:19294;Parent=Msa0302580-mRNA-1
chr2_3 exon 59401347 59401404 59401347 ID=Msa0302580-mRNA-1:exon:19295;Parent=Msa0302580-mRNA-1
chr2_3 exon 59401546 59401653 59401546 ID=Msa0302580-mRNA-1:exon:19296;Parent=Msa0302580-mRNA-1
chr2_3 exon 59402651 59402732 59402651 ID=Msa0302580-mRNA-1:exon:19297;Parent=Msa0302580-mRNA-1
chr2_3 exon 59404097 59404226 59404097 ID=Msa0302580-mRNA-1:exon:19298;Parent=Msa0302580-mRNA-1
chr2_3 exon 59404310 59404452 59404310 ID=Msa0302580-mRNA-1:exon:19299;Parent=Msa0302580-mRNA-1
chr2_3 exon 59404547 59404633 59404547 ID=Msa0302580-mRNA-1:exon:19300;Parent=Msa0302580-mRNA-1
chr2_3 exon 59404734 59404817 59404734 ID=Msa0302580-mRNA-1:exon:19301;Parent=Msa0302580-mRNA-1
chr2_3 exon 59404913 59405337 59404913 ID=Msa0302580-mRNA-1:exon:19302;Parent=Msa0302580-mRNA-1
chr2_3 CDS 59400729 59400834 59400729 ID=Msa0302580-mRNA-1:cds;Parent=Msa0302580-mRNA-1
chr2_3 CDS 59401347 59401404 59401347 ID=Msa0302580-mRNA-1:cds;Parent=Msa0302580-mRNA-1
chr2_3 CDS 59401546 59401653 59401546 ID=Msa0302580-mRNA-1:cds;Parent=Msa0302580-mRNA-1
chr2_3 CDS 59402651 59402732 59402651 ID=Msa0302580-mRNA-1:cds;Parent=Msa0302580-mRNA-1
chr2_3 CDS 59404097 59404226 59404097 ID=Msa0302580-mRNA-1:cds;Parent=Msa0302580-mRNA-1
chr2_3 CDS 59404310 59404452 59404310 ID=Msa0302580-mRNA-1:cds;Parent=Msa0302580-mRNA-1
chr2_3 CDS 59404547 59404633 59404547 ID=Msa0302580-mRNA-1:cds;Parent=Msa0302580-mRNA-1
chr2_3 CDS 59404734 59404817 59404734 ID=Msa0302580-mRNA-1:cds;Parent=Msa0302580-mRNA-1
chr2_3 CDS 59404913 59404987 59404913 ID=Msa0302580-mRNA-1:cds;Parent=Msa0302580-mRNA-1
chr2_3 three_prime_UTR 59404988 59405337 59404988 ID=Msa0302580-mRNA-1:three_prime_utr;Parent=Msa0302580-mRNA-1
Gene Sequence

>Msa0302580

ATGAATACTTGTGGTGCTGTGAAATGTGTGGATGATGATGATATTCAAATTTTGGACGAAGGGTGGGACTGCTCTTTGGGGGAAGTAGCTAGGTTGTCTTGGGTGGTTCCATTTACCATGACTAAACAACACGCTAATTGGTCTCCATATGACAACAATGGAGGATCTTGTGTCGCAATTGCTGGATCGGATTACTGTGTGATCGCAGCTGATACAAGGATGTCCACCGGTTACAACATCCTCACTCGTGATTACTCCAAAATCTCTCACTTAGCTGAGAAATGTGTGATGGCTTCTTCTGGTTTTCAAGCTGATGTGAAGGCTTTGCAGAAGGTTTTGTCTGCTAGGCATTTGACTTATCAGCATCAACACAACAAGCAGATGAGCTGCCCTGCAATGGCTCAATTGCTTTCAAACACACTTTATTACAAACGCTTCTTTCCTTACTATTCTTTCAATGTGTTGGGCGGCCTTGACAGTGAAGGAAAGGGATGTGTCTTCACTTATGATGCTGTTGGTTCCTATGAGAGGGTGGGATATAGCTCTCAGGGTTCTGGCTCCACTCTCATTATGCCGTTTCTTGATAACCAACTGAAGTCCCCCAGCCCACTCCTCTTACCTGCCCAGGATGCCGTTACTCCACTGTCTGAAGCAGAAGCAGTTGATCTGGTCAAAACTGTTTTTGCGTCTGCAACTGAGAGAGATATATACACTTGTTTAAGACCTGTTTTGCAAAGTCAAAATACAAGCCGTCCTATTAAGATCAGGCGGTTGAAATCTCGTGACTGTGAATGCAGGGGGGATAAGGTTGAAATTGTCATCCTAAATGCTGGTGGTATTCATCGTGAGTTCATGGACCTAAGGAAAGACTGA

Protein sequence

>Msa0302580

MNTCGAVKCVDDDDIQILDEGWDCSLGEVARLSWVVPFTMTKQHANWSPYDNNGGSCVAIAGSDYCVIAADTRMSTGYNILTRDYSKISHLAEKCVMASSGFQADVKALQKVLSARHLTYQHQHNKQMSCPAMAQLLSNTLYYKRFFPYYSFNVLGGLDSEGKGCVFTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDAVTPLSEAEAVDLVKTVFASATERDIYTCLRPVLQSQNTSRPIKIRRLKSRDCECRGDKVEIVILNAGGIHREFMDLRKD*