AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0414540

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0414540 MtrunA17_Chr3g0107591 91.328 369 29 1 1 366 1 369 0.0 694
Msa0414540 MtrunA17_Chr4g0008111 75.881 369 74 3 1 365 1 358 0.0 562
Msa0414540 MtrunA17_Chr8g0372821 68.649 370 112 1 1 366 1 370 0.0 534
Msa0414540 MtrunA17_Chr8g0372671 70.732 369 96 3 1 365 1 361 0.0 533
Msa0414540 MtrunA17_Chr5g0404631 66.760 358 118 1 9 365 23 380 0.0 516
Msa0414540 MtrunA17_Chr6g0475221 64.324 370 112 5 1 366 1 354 1.50e-167 471
Msa0414540 MtrunA17_Chr6g0475241 65.439 353 108 2 14 366 19 357 1.76e-165 466
Msa0414540 MtrunA17_Chr8g0343971 59.730 370 133 3 1 365 1 359 2.30e-159 451
Msa0414540 MtrunA17_Chr8g0343981 59.944 357 128 3 10 365 14 356 9.99e-153 434
Msa0414540 MtrunA17_Chr3g0144871 42.975 363 192 5 10 365 14 368 2.88e-101 303
Msa0414540 MtrunA17_Chr3g0107871 40.857 350 190 5 21 364 2 340 3.45e-87 266
Msa0414540 MtrunA17_Chr5g0419851 36.740 362 203 4 1 351 61 407 1.53e-81 255
Msa0414540 MtrunA17_Chr7g0252361 36.827 353 204 5 22 366 24 365 1.06e-74 235
Msa0414540 MtrunA17_Chr8g0372801 78.462 130 28 0 86 215 31 160 3.21e-72 223
Msa0414540 MtrunA17_Chr1g0155451 40.000 215 116 2 157 365 9 216 3.14e-54 177
Msa0414540 MtrunA17_Chr1g0208641 35.588 340 173 11 19 342 31 340 5.80e-50 171
Msa0414540 MtrunA17_Chr5g0444921 33.832 334 190 7 47 363 70 389 1.11e-49 171
Msa0414540 MtrunA17_Chr3g0100101 35.082 305 176 6 50 342 63 357 3.24e-46 162
Msa0414540 MtrunA17_Chr7g0252501 37.073 205 115 4 164 366 38 230 3.70e-40 142
Msa0414540 MtrunA17_Chr6g0455071 52.212 113 44 2 133 239 11 119 8.82e-35 124
Msa0414540 MtrunA17_Chr1g0155461 44.444 135 65 5 21 145 25 159 1.30e-28 110
Msa0414540 MtrunA17_Chr1g0155491 42.466 146 74 4 10 145 14 159 3.22e-28 109
Msa0414540 MtrunA17_Chr7g0252341 46.364 110 53 3 50 157 27 132 3.68e-24 97.1
Msa0414540 MtrunA17_Chr1g0155471 37.903 124 69 1 242 365 9 124 1.04e-22 92.0
Msa0414540 MtrunA17_Chr1g0155481 46.988 83 44 0 159 241 17 99 1.83e-22 92.4
Msa0414540 MtrunA17_Chr3g0099271 32.632 190 108 4 164 347 15 190 1.46e-20 89.0
Msa0414540 MtrunA17_Chr3g0099281 38.596 114 67 1 47 157 68 181 3.30e-19 84.7
Msa0414540 MtrunA17_Chr6g0455081 30.769 143 84 4 224 365 2 130 1.87e-17 78.2
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0414540 AT3G11480.1 42.659 361 185 5 10 365 36 379 1.09e-97 295
Msa0414540 AT5G04380.3 41.880 351 183 6 21 365 54 389 1.71e-91 280
Msa0414540 AT5G66430.1 40.223 358 203 4 10 365 6 354 2.06e-91 278
Msa0414540 AT5G04370.1 42.458 358 191 6 10 365 46 390 2.20e-91 280
Msa0414540 AT5G04370.3 42.458 358 191 6 10 365 51 395 4.35e-91 279
Msa0414540 AT5G04370.2 42.458 358 191 6 10 365 65 409 5.04e-91 279
Msa0414540 AT5G04380.2 42.470 332 174 5 36 365 2 318 1.11e-88 270
Msa0414540 AT3G21950.1 41.892 370 189 6 10 365 11 368 4.04e-87 268
Msa0414540 AT4G36470.1 40.741 378 188 9 7 365 10 370 6.13e-87 267
Msa0414540 AT1G19640.1 41.860 387 202 6 1 364 1 387 6.34e-87 268
Msa0414540 AT5G04380.1 41.311 351 178 7 21 365 50 378 1.09e-86 267
Msa0414540 AT5G38020.1 41.622 370 190 8 10 365 11 368 1.55e-86 266
Msa0414540 AT5G38020.2 43.284 335 165 7 44 365 7 329 4.37e-83 256
Msa0414540 AT2G14060.1 39.011 364 204 6 10 365 19 372 1.53e-82 256
Msa0414540 AT3G21950.2 38.308 402 190 7 10 365 11 400 2.59e-80 251
Msa0414540 AT2G14060.2 43.636 220 120 2 10 228 19 235 1.71e-59 193
Msa0414540 AT1G68040.1 35.088 342 185 8 10 339 18 334 4.54e-55 185
Msa0414540 AT5G55250.2 34.203 345 193 10 31 358 9 336 3.30e-50 172
Msa0414540 AT5G55250.1 33.333 366 210 10 10 358 26 374 6.44e-50 172
Msa0414540 AT1G15125.1 32.295 353 191 12 10 346 6 326 1.12e-46 162
Msa0414540 AT5G38100.3 36.422 313 157 10 46 345 31 314 2.55e-46 161
Msa0414540 AT5G38100.1 36.422 313 157 10 46 345 54 337 3.61e-46 161
Msa0414540 AT5G37970.1 34.940 332 174 9 48 365 59 362 2.20e-44 157
Msa0414540 AT4G26420.1 31.928 332 196 10 25 340 33 350 2.14e-43 154
Msa0414540 AT5G37990.1 34.030 335 173 11 48 365 59 362 4.99e-43 153
Msa0414540 AT5G38780.2 31.661 319 163 9 47 345 7 290 1.72e-40 145
Msa0414540 AT5G56300.1 27.378 347 213 8 14 340 33 360 1.73e-40 147
Msa0414540 AT5G38780.1 31.661 319 163 9 47 345 56 339 3.06e-40 146
Msa0414540 AT3G44840.1 30.973 339 193 9 10 338 12 319 6.30e-37 137
Msa0414540 AT3G44870.1 32.740 281 139 7 21 280 23 274 1.06e-35 134
Msa0414540 AT1G66720.1 28.909 339 202 8 10 338 14 323 4.61e-35 132
Msa0414540 AT3G44860.1 33.333 282 139 7 21 280 23 277 5.30e-35 131
Msa0414540 AT1G66700.1 27.778 342 203 9 10 338 14 324 5.11e-34 129
Msa0414540 AT4G26420.3 35.500 200 111 7 25 214 33 224 6.84e-31 118
Msa0414540 AT4G26420.2 35.500 200 111 7 25 214 21 212 1.21e-30 118
Msa0414540 AT1G66690.1 26.989 352 193 10 10 338 14 324 3.00e-30 119
Msa0414540 AT5G38100.4 41.618 173 82 5 46 209 54 216 6.60e-30 115
Msa0414540 AT5G38100.2 41.618 173 82 5 46 209 54 216 7.35e-30 115
Msa0414540 AT1G15125.2 34.419 215 116 8 10 213 6 206 9.73e-28 109
Msa0414540 AT1G66700.3 31.905 210 120 5 10 209 14 210 4.70e-25 102

Find 99 sgRNAs with CRISPR-Local

Find 246 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GCAGACTTGGGTTGCTCTTT+TGG 0.137193 3_2:-60085302 Msa0414540:CDS
TAGTAAAGGTACAAATAATT+TGG 0.162446 3_2:-60085491 Msa0414540:five_prime_UTR
ATCATTTGTCATCAATAAAT+TGG 0.187526 3_2:-60084482 Msa0414540:CDS
TGGAGGTTTCTGAAGTTAAT+TGG 0.202013 3_2:-60084462 Msa0414540:CDS
TATAGCCAGTCTATATTATA+TGG 0.206266 3_2:-60085447 Msa0414540:CDS
CCTCTAAGACCATATCATTA+AGG 0.240938 3_2:+60084666 None:intergenic
AGCACCTTCAACTAATTCTT+TGG 0.262517 3_2:+60084775 None:intergenic
CAAATGATTCTAACACTTCT+AGG 0.264985 3_2:-60084752 Msa0414540:CDS
CGGGGAATGTGTTGCAATAT+AGG 0.287603 3_2:+60085339 None:intergenic
GCAAGGAGTGTTGTTACATT+TGG 0.289796 3_2:-60084706 Msa0414540:CDS
CATTGCCAGTATCCTGAAAA+AGG 0.295034 3_2:-60083978 Msa0414540:three_prime_UTR
GTCTGCAATTGCCAAGCTTC+CGG 0.298575 3_2:+60085319 None:intergenic
TAACAACACTCCTTGCTTGA+TGG 0.305696 3_2:+60084713 None:intergenic
AGTAAAGGTACAAATAATTT+GGG 0.307911 3_2:-60085490 Msa0414540:five_prime_UTR
TGTTACATCTATGGGGTTCC+TGG 0.309701 3_2:-60085086 Msa0414540:CDS
ATCACATAGTTTCTCTTTGA+AGG 0.315688 3_2:+60085133 None:intergenic
ACAATATGGCACAATGCATT+AGG 0.317665 3_2:-60084369 Msa0414540:CDS
GATGGAGATGGATAATAGTT+AGG 0.322863 3_2:+60084535 None:intergenic
ATAGGCCCGTGTTACATCTA+TGG 0.324301 3_2:-60085095 Msa0414540:CDS
GGTGAACTTAGTCTTCTCTT+TGG 0.329569 3_2:+60084252 None:intergenic
CCTTAATGATATGGTCTTAG+AGG 0.336456 3_2:-60084666 Msa0414540:intron
CAAGGAGTGTTGTTACATTT+GGG 0.342418 3_2:-60084705 Msa0414540:CDS
CAGTCTTCAATGGCTATCTA+AGG 0.342755 3_2:-60085006 Msa0414540:intron
GGCTATCTCCCTTAATGATA+TGG 0.343052 3_2:-60084675 Msa0414540:CDS
ACAAAATGCAAACTATTATC+TGG 0.350999 3_2:+60085041 None:intergenic
CTTTGGTGAAGGTGTCATTA+AGG 0.358741 3_2:-60084317 Msa0414540:CDS
ATAACTAACAACATATATAT+TGG 0.362994 3_2:+60084062 None:intergenic
ATTTATAATAACTTATTAAG+AGG 0.366962 3_2:+60085684 None:intergenic
TCTGCAATTGCCAAGCTTCC+GGG 0.370317 3_2:+60085320 None:intergenic
AGAGAAACTATGTGATGAAA+TGG 0.370752 3_2:-60085126 Msa0414540:CDS
TACACTTGTATAATTGCATA+TGG 0.376250 3_2:+60085549 None:intergenic
TTGAGGGGCTTGTGCTTGTA+AGG 0.382172 3_2:+60084861 None:intergenic
AATTATAATTTGGACTTAAG+TGG 0.403360 3_2:-60085785 Msa0414540:five_prime_UTR
TTGTTGTTGTCAGCACCCTC+TGG 0.403474 3_2:+60084896 None:intergenic
AAGCTTGGCAATTGCAGACT+TGG 0.404644 3_2:-60085315 Msa0414540:CDS
GATATCACCAACAAAGTGTT+TGG 0.405615 3_2:+60085278 None:intergenic
GATGAAATGGAAACTGAAAT+AGG 0.407347 3_2:-60085113 Msa0414540:CDS
GTTGCAATATAGGTTGGTTA+TGG 0.409482 3_2:+60085349 None:intergenic
TAGAGATGATGGATACAATA+TGG 0.413499 3_2:-60084383 Msa0414540:CDS
TGTCAACGATATGCTAAGAT+TGG 0.419291 3_2:+60084231 None:intergenic
CATTTCAGATTCAAAGTCAT+AGG 0.420715 3_2:+60084417 None:intergenic
CAATATGGCACAATGCATTA+GGG 0.420742 3_2:-60084368 Msa0414540:CDS
CTCTAAGACCATATCATTAA+GGG 0.438228 3_2:+60084667 None:intergenic
TATAATTTGATAGTGATAGA+AGG 0.440602 3_2:+60085652 None:intergenic
TTTGGACTTAAGTGGCGATT+GGG 0.452606 3_2:-60085777 Msa0414540:five_prime_UTR
TCAGAATCACTTAGAGATGA+TGG 0.456810 3_2:-60084394 Msa0414540:CDS
ATCTCCATCTGAAGTGAAGT+TGG 0.456867 3_2:-60084521 Msa0414540:CDS
TAGGCCCGTGTTACATCTAT+GGG 0.457629 3_2:-60085094 Msa0414540:CDS
ACGTTGTTGAAGTCATTTCC+CGG 0.462185 3_2:+60085173 None:intergenic
ATTTGGACTTAAGTGGCGAT+TGG 0.466591 3_2:-60085778 Msa0414540:five_prime_UTR
CTAGTTAGTCACTTTGGTGA+AGG 0.467251 3_2:-60084328 Msa0414540:CDS
CCTTTGCTAGTTAGTCACTT+TGG 0.468922 3_2:-60084334 Msa0414540:CDS
CAACACATTCCCCGGAAGCT+TGG 0.475670 3_2:-60085330 Msa0414540:CDS
ACTTCCAACTTCACTTCAGA+TGG 0.478421 3_2:+60084517 None:intergenic
AGCTTGGCAATTGCAGACTT+GGG 0.487576 3_2:-60085314 Msa0414540:CDS
CACATGAATTTCTGTTGTAT+CGG 0.489218 3_2:-60083813 Msa0414540:three_prime_UTR
TAAGCCTTGATGACATTTGA+GGG 0.496394 3_2:+60084845 None:intergenic
ATTCCTCGTACAGTCTTCAA+TGG 0.498924 3_2:-60085016 Msa0414540:CDS
TTAGCTAGGGAATGTTATGA+TGG 0.499854 3_2:-60084106 Msa0414540:three_prime_UTR
ATGGAGATGGATAATAGTTA+GGG 0.500415 3_2:+60084536 None:intergenic
TTGTTACATTTGGGAACTCA+TGG 0.503339 3_2:-60084696 Msa0414540:CDS
GTAAGCCTTGATGACATTTG+AGG 0.508975 3_2:+60084844 None:intergenic
CGTGCCAAAGAATTAGTTGA+AGG 0.512292 3_2:-60084779 Msa0414540:CDS
ATAGCCAGTCTATATTATAT+GGG 0.513066 3_2:-60085446 Msa0414540:CDS
ATTTGATAGTGATAGAAGGT+AGG 0.515402 3_2:+60085656 None:intergenic
ATTTGTCATCAATAAATTGG+AGG 0.518651 3_2:-60084479 Msa0414540:CDS
GTATGTTGAAATTATCTATG+AGG 0.526038 3_2:-60084015 Msa0414540:three_prime_UTR
GAATGTGTTGCAATATAGGT+TGG 0.528201 3_2:+60085343 None:intergenic
TTTCTCTTTGAAGGTGTCAA+GGG 0.532238 3_2:+60085142 None:intergenic
TAGCTAGGGAATGTTATGAT+GGG 0.540129 3_2:-60084105 Msa0414540:three_prime_UTR
GTTTCTCTTTGAAGGTGTCA+AGG 0.541705 3_2:+60085141 None:intergenic
AACTTCACTTCAGATGGAGA+TGG 0.545461 3_2:+60084523 None:intergenic
ATCAGAAATTATCAAAGGTG+TGG 0.551256 3_2:-60085258 Msa0414540:CDS
TTTGATAGTGATAGAAGGTA+GGG 0.551680 3_2:+60085657 None:intergenic
GTTATGGCTTCGTCTCTCAA+AGG 0.551828 3_2:+60085365 None:intergenic
CTATATTGCAACACATTCCC+CGG 0.563925 3_2:-60085338 Msa0414540:CDS
AGATCCCATATAATATAGAC+TGG 0.567714 3_2:+60085442 None:intergenic
GTCAGTGACAGTGATTAGCT+AGG 0.568400 3_2:-60084120 Msa0414540:three_prime_UTR
AAGTTGGAAGTTCTCAAAGA+AGG 0.569653 3_2:-60084505 Msa0414540:CDS
CTGCAATTGCCAAGCTTCCG+GGG 0.575841 3_2:+60085321 None:intergenic
GGCACAATGCATTAGGGCTG+TGG 0.579915 3_2:-60084362 Msa0414540:CDS
AAGCCCCTCAAATGTCATCA+AGG 0.583515 3_2:-60084849 Msa0414540:CDS
AGCTAGGGAATGTTATGATG+GGG 0.592444 3_2:-60084104 Msa0414540:three_prime_UTR
CCAAAGTGACTAACTAGCAA+AGG 0.593693 3_2:+60084334 None:intergenic
TCAGTGACAGTGATTAGCTA+GGG 0.595013 3_2:-60084119 Msa0414540:three_prime_UTR
GTGATATCAGAAATTATCAA+AGG 0.602157 3_2:-60085263 Msa0414540:CDS
AATTGTAAATACGCAGCGAA+AGG 0.609362 3_2:-60085405 Msa0414540:CDS
GGTGATTCATTAGGTTCCAG+AGG 0.617653 3_2:-60084912 Msa0414540:intron
GCTAATCACTGTCACTGACA+AGG 0.625900 3_2:+60084124 None:intergenic
ATGCGACAATCCATCAAGCA+AGG 0.626620 3_2:-60084723 Msa0414540:CDS
AAGCCTTGATGACATTTGAG+GGG 0.639370 3_2:+60084846 None:intergenic
GTGATTCATTAGGTTCCAGA+GGG 0.640011 3_2:-60084911 Msa0414540:intron
ATTCTGCCATAAAATGAACC+AGG 0.644081 3_2:+60085068 None:intergenic
GGAACCCCATAGATGTAACA+CGG 0.651299 3_2:+60085089 None:intergenic
GAACCCCATAGATGTAACAC+GGG 0.684498 3_2:+60085090 None:intergenic
GAGGGTGCTGACAACAACAA+AGG 0.692851 3_2:-60084893 Msa0414540:CDS
TAGCCATTGAAGACTGTACG+AGG 0.694298 3_2:+60085013 None:intergenic
TCTATGAGGAGTTTAATCAG+TGG 0.701288 3_2:-60084001 Msa0414540:three_prime_UTR
AGGCCCGTGTTACATCTATG+GGG 0.761192 3_2:-60085093 Msa0414540:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TTTTTGACAAAATTATAATT+TGG - chr3_2:60083819-60083838 Msa0414540:three_prime_UTR 10.0%
!! ATTTATAATAACTTATTAAG+AGG + chr3_2:60083933-60083952 None:intergenic 10.0%
!! ATTCAAAAATACTTTATATT+CGG + chr3_2:60084415-60084434 None:intergenic 10.0%
!!! ATAGAAAAATTTTAACTTAT+CGG - chr3_2:60085335-60085354 Msa0414540:CDS 10.0%
!!! AATTAATTTTGATTTTTGTA+TGG + chr3_2:60085768-60085787 None:intergenic 10.0%
!!! TTTTTGACAAAATTATAATT+TGG - chr3_2:60083819-60083838 Msa0414540:three_prime_UTR 10.0%
!! ATTTATAATAACTTATTAAG+AGG + chr3_2:60083933-60083952 None:intergenic 10.0%
!! ATTCAAAAATACTTTATATT+CGG + chr3_2:60084415-60084434 None:intergenic 10.0%
!!! ATAGAAAAATTTTAACTTAT+CGG - chr3_2:60085335-60085354 Msa0414540:CDS 10.0%
!!! AATTAATTTTGATTTTTGTA+TGG + chr3_2:60085768-60085787 None:intergenic 10.0%
!!! ATTTTCTCTATATTTAGTAA+AGG - chr3_2:60084109-60084128 Msa0414540:three_prime_UTR 15.0%
!! TTCAAAAATACTTTATATTC+GGG + chr3_2:60084414-60084433 None:intergenic 15.0%
!!! AAGTTAAAATTTTTCTATAG+CGG + chr3_2:60085333-60085352 None:intergenic 15.0%
!! ATAACTAACAACATATATAT+TGG + chr3_2:60085555-60085574 None:intergenic 15.0%
!!! ATTTTCTCTATATTTAGTAA+AGG - chr3_2:60084109-60084128 Msa0414540:three_prime_UTR 15.0%
!! TTCAAAAATACTTTATATTC+GGG + chr3_2:60084414-60084433 None:intergenic 15.0%
!!! AAGTTAAAATTTTTCTATAG+CGG + chr3_2:60085333-60085352 None:intergenic 15.0%
!! ATAACTAACAACATATATAT+TGG + chr3_2:60085555-60085574 None:intergenic 15.0%
!! AATTATAATTTGGACTTAAG+TGG - chr3_2:60083829-60083848 Msa0414540:three_prime_UTR 20.0%
!!! TATAATTTGATAGTGATAGA+AGG + chr3_2:60083965-60083984 None:intergenic 20.0%
!!! TAGTAAAGGTACAAATAATT+TGG - chr3_2:60084123-60084142 Msa0414540:three_prime_UTR 20.0%
!!! AGTAAAGGTACAAATAATTT+GGG - chr3_2:60084124-60084143 Msa0414540:three_prime_UTR 20.0%
!!! TAGATATGAATATTTTGTGT+TGG - chr3_2:60084677-60084696 Msa0414540:CDS 20.0%
!! ATCATTTGTCATCAATAAAT+TGG - chr3_2:60085132-60085151 Msa0414540:CDS 20.0%
!! AATTATAATTTGGACTTAAG+TGG - chr3_2:60083829-60083848 Msa0414540:three_prime_UTR 20.0%
!!! TATAATTTGATAGTGATAGA+AGG + chr3_2:60083965-60083984 None:intergenic 20.0%
!!! TAGTAAAGGTACAAATAATT+TGG - chr3_2:60084123-60084142 Msa0414540:three_prime_UTR 20.0%
!!! AGTAAAGGTACAAATAATTT+GGG - chr3_2:60084124-60084143 Msa0414540:three_prime_UTR 20.0%
!!! TAGATATGAATATTTTGTGT+TGG - chr3_2:60084677-60084696 Msa0414540:CDS 20.0%
!! ATCATTTGTCATCAATAAAT+TGG - chr3_2:60085132-60085151 Msa0414540:CDS 20.0%
! TACACTTGTATAATTGCATA+TGG + chr3_2:60084068-60084087 None:intergenic 25.0%
! TATAGCCAGTCTATATTATA+TGG - chr3_2:60084167-60084186 Msa0414540:three_prime_UTR 25.0%
! ATAGCCAGTCTATATTATAT+GGG - chr3_2:60084168-60084187 Msa0414540:three_prime_UTR 25.0%
! GTGATATCAGAAATTATCAA+AGG - chr3_2:60084351-60084370 Msa0414540:CDS 25.0%
!!! AGTATTTTTGAATGATCTAC+CGG - chr3_2:60084422-60084441 Msa0414540:CDS 25.0%
! ACAAAATGCAAACTATTATC+TGG + chr3_2:60084576-60084595 None:intergenic 25.0%
! TTTAATCTACTCATGAAGAA+TGG - chr3_2:60084653-60084672 Msa0414540:intron 25.0%
!! TATGAATATTTTGTGTTGGA+TGG - chr3_2:60084681-60084700 Msa0414540:CDS 25.0%
!!! CAGATTTCTCTTTTTTTCTT+CGG - chr3_2:60084809-60084828 Msa0414540:CDS 25.0%
! ATTTGTCATCAATAAATTGG+AGG - chr3_2:60085135-60085154 Msa0414540:CDS 25.0%
! GTATGTTGAAATTATCTATG+AGG - chr3_2:60085599-60085618 Msa0414540:five_prime_UTR 25.0%
! TACACTTGTATAATTGCATA+TGG + chr3_2:60084068-60084087 None:intergenic 25.0%
! TATAGCCAGTCTATATTATA+TGG - chr3_2:60084167-60084186 Msa0414540:three_prime_UTR 25.0%
! ATAGCCAGTCTATATTATAT+GGG - chr3_2:60084168-60084187 Msa0414540:three_prime_UTR 25.0%
! GTGATATCAGAAATTATCAA+AGG - chr3_2:60084351-60084370 Msa0414540:CDS 25.0%
!!! AGTATTTTTGAATGATCTAC+CGG - chr3_2:60084422-60084441 Msa0414540:CDS 25.0%
! ACAAAATGCAAACTATTATC+TGG + chr3_2:60084576-60084595 None:intergenic 25.0%
! TTTAATCTACTCATGAAGAA+TGG - chr3_2:60084653-60084672 Msa0414540:intron 25.0%
!! TATGAATATTTTGTGTTGGA+TGG - chr3_2:60084681-60084700 Msa0414540:CDS 25.0%
!!! CAGATTTCTCTTTTTTTCTT+CGG - chr3_2:60084809-60084828 Msa0414540:CDS 25.0%
! ATTTGTCATCAATAAATTGG+AGG - chr3_2:60085135-60085154 Msa0414540:CDS 25.0%
! GTATGTTGAAATTATCTATG+AGG - chr3_2:60085599-60085618 Msa0414540:five_prime_UTR 25.0%
!! TTTGATAGTGATAGAAGGTA+GGG + chr3_2:60083960-60083979 None:intergenic 30.0%
!! ATTTGATAGTGATAGAAGGT+AGG + chr3_2:60083961-60083980 None:intergenic 30.0%
AGATCCCATATAATATAGAC+TGG + chr3_2:60084175-60084194 None:intergenic 30.0%
ATCAGAAATTATCAAAGGTG+TGG - chr3_2:60084356-60084375 Msa0414540:CDS 30.0%
!! GTATTTTTGAATGATCTACC+GGG - chr3_2:60084423-60084442 Msa0414540:CDS 30.0%
ATCACATAGTTTCTCTTTGA+AGG + chr3_2:60084484-60084503 None:intergenic 30.0%
AGAGAAACTATGTGATGAAA+TGG - chr3_2:60084488-60084507 Msa0414540:CDS 30.0%
GATGAAATGGAAACTGAAAT+AGG - chr3_2:60084501-60084520 Msa0414540:CDS 30.0%
CAAATGATTCTAACACTTCT+AGG - chr3_2:60084862-60084881 Msa0414540:CDS 30.0%
!! CTCTAAGACCATATCATTAA+GGG + chr3_2:60084950-60084969 None:intergenic 30.0%
ATGGAGATGGATAATAGTTA+GGG + chr3_2:60085081-60085100 None:intergenic 30.0%
CATTTCAGATTCAAAGTCAT+AGG + chr3_2:60085200-60085219 None:intergenic 30.0%
!! TAGAGATGATGGATACAATA+TGG - chr3_2:60085231-60085250 Msa0414540:CDS 30.0%
! ACCATGAGTAGAAACATTTT+TGG - chr3_2:60085411-60085430 Msa0414540:CDS 30.0%
! ACCAAAAATGTTTCTACTCA+TGG + chr3_2:60085415-60085434 None:intergenic 30.0%
CACATGAATTTCTGTTGTAT+CGG - chr3_2:60085801-60085820 Msa0414540:five_prime_UTR 30.0%
!! TTTGATAGTGATAGAAGGTA+GGG + chr3_2:60083960-60083979 None:intergenic 30.0%
!! ATTTGATAGTGATAGAAGGT+AGG + chr3_2:60083961-60083980 None:intergenic 30.0%
AGATCCCATATAATATAGAC+TGG + chr3_2:60084175-60084194 None:intergenic 30.0%
ATCAGAAATTATCAAAGGTG+TGG - chr3_2:60084356-60084375 Msa0414540:CDS 30.0%
!! GTATTTTTGAATGATCTACC+GGG - chr3_2:60084423-60084442 Msa0414540:CDS 30.0%
ATCACATAGTTTCTCTTTGA+AGG + chr3_2:60084484-60084503 None:intergenic 30.0%
AGAGAAACTATGTGATGAAA+TGG - chr3_2:60084488-60084507 Msa0414540:CDS 30.0%
GATGAAATGGAAACTGAAAT+AGG - chr3_2:60084501-60084520 Msa0414540:CDS 30.0%
CAAATGATTCTAACACTTCT+AGG - chr3_2:60084862-60084881 Msa0414540:CDS 30.0%
!! CTCTAAGACCATATCATTAA+GGG + chr3_2:60084950-60084969 None:intergenic 30.0%
ATGGAGATGGATAATAGTTA+GGG + chr3_2:60085081-60085100 None:intergenic 30.0%
CATTTCAGATTCAAAGTCAT+AGG + chr3_2:60085200-60085219 None:intergenic 30.0%
!! TAGAGATGATGGATACAATA+TGG - chr3_2:60085231-60085250 Msa0414540:CDS 30.0%
! ACCATGAGTAGAAACATTTT+TGG - chr3_2:60085411-60085430 Msa0414540:CDS 30.0%
! ACCAAAAATGTTTCTACTCA+TGG + chr3_2:60085415-60085434 None:intergenic 30.0%
CACATGAATTTCTGTTGTAT+CGG - chr3_2:60085801-60085820 Msa0414540:five_prime_UTR 30.0%
AATTGTAAATACGCAGCGAA+AGG - chr3_2:60084209-60084228 Msa0414540:exon 35.0%
!! GTTGCAATATAGGTTGGTTA+TGG + chr3_2:60084268-60084287 None:intergenic 35.0%
GAATGTGTTGCAATATAGGT+TGG + chr3_2:60084274-60084293 None:intergenic 35.0%
! TTTTGGACCAAACACTTTGT+TGG - chr3_2:60084329-60084348 Msa0414540:CDS 35.0%
! GATATCACCAACAAAGTGTT+TGG + chr3_2:60084339-60084358 None:intergenic 35.0%
!! TTTCTCTTTGAAGGTGTCAA+GGG + chr3_2:60084475-60084494 None:intergenic 35.0%
ATTCTGCCATAAAATGAACC+AGG + chr3_2:60084549-60084568 None:intergenic 35.0%
! TAAGCCTTGATGACATTTGA+GGG + chr3_2:60084772-60084791 None:intergenic 35.0%
AGCACCTTCAACTAATTCTT+TGG + chr3_2:60084842-60084861 None:intergenic 35.0%
!! CAAGGAGTGTTGTTACATTT+GGG - chr3_2:60084909-60084928 Msa0414540:intron 35.0%
TTGTTACATTTGGGAACTCA+TGG - chr3_2:60084918-60084937 Msa0414540:intron 35.0%
!! CCTCTAAGACCATATCATTA+AGG + chr3_2:60084951-60084970 None:intergenic 35.0%
! CCTTAATGATATGGTCTTAG+AGG - chr3_2:60084948-60084967 Msa0414540:intron 35.0%
AATAAATCGATCTATGCTGC+AGG - chr3_2:60085018-60085037 Msa0414540:CDS 35.0%
ATAAATCGATCTATGCTGCA+GGG - chr3_2:60085019-60085038 Msa0414540:CDS 35.0%
GATGGAGATGGATAATAGTT+AGG + chr3_2:60085082-60085101 None:intergenic 35.0%
AAGTTGGAAGTTCTCAAAGA+AGG - chr3_2:60085109-60085128 Msa0414540:CDS 35.0%
!! TGGAGGTTTCTGAAGTTAAT+TGG - chr3_2:60085152-60085171 Msa0414540:CDS 35.0%
TCAGAATCACTTAGAGATGA+TGG - chr3_2:60085220-60085239 Msa0414540:CDS 35.0%
ACAATATGGCACAATGCATT+AGG - chr3_2:60085245-60085264 Msa0414540:CDS 35.0%
CAATATGGCACAATGCATTA+GGG - chr3_2:60085246-60085265 Msa0414540:CDS 35.0%
TGTCAACGATATGCTAAGAT+TGG + chr3_2:60085386-60085405 None:intergenic 35.0%
TTAGCTAGGGAATGTTATGA+TGG - chr3_2:60085508-60085527 Msa0414540:five_prime_UTR 35.0%
TAGCTAGGGAATGTTATGAT+GGG - chr3_2:60085509-60085528 Msa0414540:five_prime_UTR 35.0%
TCTATGAGGAGTTTAATCAG+TGG - chr3_2:60085613-60085632 Msa0414540:five_prime_UTR 35.0%
ATTGCCAGTATCCTGAAAAA+GGG - chr3_2:60085637-60085656 Msa0414540:five_prime_UTR 35.0%
AATTGTAAATACGCAGCGAA+AGG - chr3_2:60084209-60084228 Msa0414540:exon 35.0%
!! GTTGCAATATAGGTTGGTTA+TGG + chr3_2:60084268-60084287 None:intergenic 35.0%
GAATGTGTTGCAATATAGGT+TGG + chr3_2:60084274-60084293 None:intergenic 35.0%
! TTTTGGACCAAACACTTTGT+TGG - chr3_2:60084329-60084348 Msa0414540:CDS 35.0%
! GATATCACCAACAAAGTGTT+TGG + chr3_2:60084339-60084358 None:intergenic 35.0%
!! TTTCTCTTTGAAGGTGTCAA+GGG + chr3_2:60084475-60084494 None:intergenic 35.0%
ATTCTGCCATAAAATGAACC+AGG + chr3_2:60084549-60084568 None:intergenic 35.0%
! TAAGCCTTGATGACATTTGA+GGG + chr3_2:60084772-60084791 None:intergenic 35.0%
AGCACCTTCAACTAATTCTT+TGG + chr3_2:60084842-60084861 None:intergenic 35.0%
!! CAAGGAGTGTTGTTACATTT+GGG - chr3_2:60084909-60084928 Msa0414540:intron 35.0%
TTGTTACATTTGGGAACTCA+TGG - chr3_2:60084918-60084937 Msa0414540:intron 35.0%
!! CCTCTAAGACCATATCATTA+AGG + chr3_2:60084951-60084970 None:intergenic 35.0%
! CCTTAATGATATGGTCTTAG+AGG - chr3_2:60084948-60084967 Msa0414540:intron 35.0%
AATAAATCGATCTATGCTGC+AGG - chr3_2:60085018-60085037 Msa0414540:CDS 35.0%
ATAAATCGATCTATGCTGCA+GGG - chr3_2:60085019-60085038 Msa0414540:CDS 35.0%
GATGGAGATGGATAATAGTT+AGG + chr3_2:60085082-60085101 None:intergenic 35.0%
AAGTTGGAAGTTCTCAAAGA+AGG - chr3_2:60085109-60085128 Msa0414540:CDS 35.0%
!! TGGAGGTTTCTGAAGTTAAT+TGG - chr3_2:60085152-60085171 Msa0414540:CDS 35.0%
TCAGAATCACTTAGAGATGA+TGG - chr3_2:60085220-60085239 Msa0414540:CDS 35.0%
ACAATATGGCACAATGCATT+AGG - chr3_2:60085245-60085264 Msa0414540:CDS 35.0%
CAATATGGCACAATGCATTA+GGG - chr3_2:60085246-60085265 Msa0414540:CDS 35.0%
TGTCAACGATATGCTAAGAT+TGG + chr3_2:60085386-60085405 None:intergenic 35.0%
TTAGCTAGGGAATGTTATGA+TGG - chr3_2:60085508-60085527 Msa0414540:five_prime_UTR 35.0%
TAGCTAGGGAATGTTATGAT+GGG - chr3_2:60085509-60085528 Msa0414540:five_prime_UTR 35.0%
TCTATGAGGAGTTTAATCAG+TGG - chr3_2:60085613-60085632 Msa0414540:five_prime_UTR 35.0%
ATTGCCAGTATCCTGAAAAA+GGG - chr3_2:60085637-60085656 Msa0414540:five_prime_UTR 35.0%
ATTTGGACTTAAGTGGCGAT+TGG - chr3_2:60083836-60083855 Msa0414540:three_prime_UTR 40.0%
TTTGGACTTAAGTGGCGATT+GGG - chr3_2:60083837-60083856 Msa0414540:three_prime_UTR 40.0%
CTATATTGCAACACATTCCC+CGG - chr3_2:60084276-60084295 Msa0414540:CDS 40.0%
ACGTTGTTGAAGTCATTTCC+CGG + chr3_2:60084444-60084463 None:intergenic 40.0%
!! GTTTCTCTTTGAAGGTGTCA+AGG + chr3_2:60084476-60084495 None:intergenic 40.0%
ATTCCTCGTACAGTCTTCAA+TGG - chr3_2:60084598-60084617 Msa0414540:intron 40.0%
CAGTCTTCAATGGCTATCTA+AGG - chr3_2:60084608-60084627 Msa0414540:intron 40.0%
GTGTTGGATGGTGATTCATT+AGG - chr3_2:60084693-60084712 Msa0414540:CDS 40.0%
GTGATTCATTAGGTTCCAGA+GGG - chr3_2:60084703-60084722 Msa0414540:CDS 40.0%
! AAGCCTTGATGACATTTGAG+GGG + chr3_2:60084771-60084790 None:intergenic 40.0%
! GTAAGCCTTGATGACATTTG+AGG + chr3_2:60084773-60084792 None:intergenic 40.0%
CGTGCCAAAGAATTAGTTGA+AGG - chr3_2:60084835-60084854 Msa0414540:CDS 40.0%
TAACAACACTCCTTGCTTGA+TGG + chr3_2:60084904-60084923 None:intergenic 40.0%
!! GCAAGGAGTGTTGTTACATT+TGG - chr3_2:60084908-60084927 Msa0414540:intron 40.0%
GGCTATCTCCCTTAATGATA+TGG - chr3_2:60084939-60084958 Msa0414540:intron 40.0%
AACTTCACTTCAGATGGAGA+TGG + chr3_2:60085094-60085113 None:intergenic 40.0%
! ATCTCCATCTGAAGTGAAGT+TGG - chr3_2:60085093-60085112 Msa0414540:CDS 40.0%
ACTTCCAACTTCACTTCAGA+TGG + chr3_2:60085100-60085119 None:intergenic 40.0%
CCAAAGTGACTAACTAGCAA+AGG + chr3_2:60085283-60085302 None:intergenic 40.0%
CCTTTGCTAGTTAGTCACTT+TGG - chr3_2:60085280-60085299 Msa0414540:CDS 40.0%
! CTAGTTAGTCACTTTGGTGA+AGG - chr3_2:60085286-60085305 Msa0414540:CDS 40.0%
!! CTTTGGTGAAGGTGTCATTA+AGG - chr3_2:60085297-60085316 Msa0414540:CDS 40.0%
! GGTGAACTTAGTCTTCTCTT+TGG + chr3_2:60085365-60085384 None:intergenic 40.0%
! TCAGTGACAGTGATTAGCTA+GGG - chr3_2:60085495-60085514 Msa0414540:five_prime_UTR 40.0%
AGCTAGGGAATGTTATGATG+GGG - chr3_2:60085510-60085529 Msa0414540:five_prime_UTR 40.0%
CATTGCCAGTATCCTGAAAA+AGG - chr3_2:60085636-60085655 Msa0414540:five_prime_UTR 40.0%
ATTTGGACTTAAGTGGCGAT+TGG - chr3_2:60083836-60083855 Msa0414540:three_prime_UTR 40.0%
TTTGGACTTAAGTGGCGATT+GGG - chr3_2:60083837-60083856 Msa0414540:three_prime_UTR 40.0%
CTATATTGCAACACATTCCC+CGG - chr3_2:60084276-60084295 Msa0414540:CDS 40.0%
ACGTTGTTGAAGTCATTTCC+CGG + chr3_2:60084444-60084463 None:intergenic 40.0%
!! GTTTCTCTTTGAAGGTGTCA+AGG + chr3_2:60084476-60084495 None:intergenic 40.0%
ATTCCTCGTACAGTCTTCAA+TGG - chr3_2:60084598-60084617 Msa0414540:intron 40.0%
CAGTCTTCAATGGCTATCTA+AGG - chr3_2:60084608-60084627 Msa0414540:intron 40.0%
GTGTTGGATGGTGATTCATT+AGG - chr3_2:60084693-60084712 Msa0414540:CDS 40.0%
GTGATTCATTAGGTTCCAGA+GGG - chr3_2:60084703-60084722 Msa0414540:CDS 40.0%
! AAGCCTTGATGACATTTGAG+GGG + chr3_2:60084771-60084790 None:intergenic 40.0%
! GTAAGCCTTGATGACATTTG+AGG + chr3_2:60084773-60084792 None:intergenic 40.0%
CGTGCCAAAGAATTAGTTGA+AGG - chr3_2:60084835-60084854 Msa0414540:CDS 40.0%
TAACAACACTCCTTGCTTGA+TGG + chr3_2:60084904-60084923 None:intergenic 40.0%
!! GCAAGGAGTGTTGTTACATT+TGG - chr3_2:60084908-60084927 Msa0414540:intron 40.0%
GGCTATCTCCCTTAATGATA+TGG - chr3_2:60084939-60084958 Msa0414540:intron 40.0%
AACTTCACTTCAGATGGAGA+TGG + chr3_2:60085094-60085113 None:intergenic 40.0%
! ATCTCCATCTGAAGTGAAGT+TGG - chr3_2:60085093-60085112 Msa0414540:CDS 40.0%
ACTTCCAACTTCACTTCAGA+TGG + chr3_2:60085100-60085119 None:intergenic 40.0%
CCAAAGTGACTAACTAGCAA+AGG + chr3_2:60085283-60085302 None:intergenic 40.0%
CCTTTGCTAGTTAGTCACTT+TGG - chr3_2:60085280-60085299 Msa0414540:CDS 40.0%
! CTAGTTAGTCACTTTGGTGA+AGG - chr3_2:60085286-60085305 Msa0414540:CDS 40.0%
!! CTTTGGTGAAGGTGTCATTA+AGG - chr3_2:60085297-60085316 Msa0414540:CDS 40.0%
! GGTGAACTTAGTCTTCTCTT+TGG + chr3_2:60085365-60085384 None:intergenic 40.0%
! TCAGTGACAGTGATTAGCTA+GGG - chr3_2:60085495-60085514 Msa0414540:five_prime_UTR 40.0%
AGCTAGGGAATGTTATGATG+GGG - chr3_2:60085510-60085529 Msa0414540:five_prime_UTR 40.0%
CATTGCCAGTATCCTGAAAA+AGG - chr3_2:60085636-60085655 Msa0414540:five_prime_UTR 40.0%
GTTATGGCTTCGTCTCTCAA+AGG + chr3_2:60084252-60084271 None:intergenic 45.0%
CGGGGAATGTGTTGCAATAT+AGG + chr3_2:60084278-60084297 None:intergenic 45.0%
AAGCTTGGCAATTGCAGACT+TGG - chr3_2:60084299-60084318 Msa0414540:CDS 45.0%
AGCTTGGCAATTGCAGACTT+GGG - chr3_2:60084300-60084319 Msa0414540:CDS 45.0%
ATAGGCCCGTGTTACATCTA+TGG - chr3_2:60084519-60084538 Msa0414540:CDS 45.0%
TAGGCCCGTGTTACATCTAT+GGG - chr3_2:60084520-60084539 Msa0414540:CDS 45.0%
GAACCCCATAGATGTAACAC+GGG + chr3_2:60084527-60084546 None:intergenic 45.0%
GGAACCCCATAGATGTAACA+CGG + chr3_2:60084528-60084547 None:intergenic 45.0%
TGTTACATCTATGGGGTTCC+TGG - chr3_2:60084528-60084547 Msa0414540:CDS 45.0%
! GGGGTTCCTGGTTCATTTTA+TGG - chr3_2:60084540-60084559 Msa0414540:CDS 45.0%
TAGCCATTGAAGACTGTACG+AGG + chr3_2:60084604-60084623 None:intergenic 45.0%
GGTGATTCATTAGGTTCCAG+AGG - chr3_2:60084702-60084721 Msa0414540:CDS 45.0%
AAGCCCCTCAAATGTCATCA+AGG - chr3_2:60084765-60084784 Msa0414540:CDS 45.0%
ATGCGACAATCCATCAAGCA+AGG - chr3_2:60084891-60084910 Msa0414540:CDS 45.0%
GCTAATCACTGTCACTGACA+AGG + chr3_2:60085493-60085512 None:intergenic 45.0%
! GTCAGTGACAGTGATTAGCT+AGG - chr3_2:60085494-60085513 Msa0414540:five_prime_UTR 45.0%
!!! ACCACCCTTTTTCAGGATAC+TGG + chr3_2:60085644-60085663 None:intergenic 45.0%
! AGTTTGCACCACCCTTTTTC+AGG + chr3_2:60085651-60085670 None:intergenic 45.0%
GTTATGGCTTCGTCTCTCAA+AGG + chr3_2:60084252-60084271 None:intergenic 45.0%
CGGGGAATGTGTTGCAATAT+AGG + chr3_2:60084278-60084297 None:intergenic 45.0%
AAGCTTGGCAATTGCAGACT+TGG - chr3_2:60084299-60084318 Msa0414540:CDS 45.0%
AGCTTGGCAATTGCAGACTT+GGG - chr3_2:60084300-60084319 Msa0414540:CDS 45.0%
ATAGGCCCGTGTTACATCTA+TGG - chr3_2:60084519-60084538 Msa0414540:CDS 45.0%
TAGGCCCGTGTTACATCTAT+GGG - chr3_2:60084520-60084539 Msa0414540:CDS 45.0%
GAACCCCATAGATGTAACAC+GGG + chr3_2:60084527-60084546 None:intergenic 45.0%
GGAACCCCATAGATGTAACA+CGG + chr3_2:60084528-60084547 None:intergenic 45.0%
TGTTACATCTATGGGGTTCC+TGG - chr3_2:60084528-60084547 Msa0414540:CDS 45.0%
! GGGGTTCCTGGTTCATTTTA+TGG - chr3_2:60084540-60084559 Msa0414540:CDS 45.0%
TAGCCATTGAAGACTGTACG+AGG + chr3_2:60084604-60084623 None:intergenic 45.0%
GGTGATTCATTAGGTTCCAG+AGG - chr3_2:60084702-60084721 Msa0414540:CDS 45.0%
AAGCCCCTCAAATGTCATCA+AGG - chr3_2:60084765-60084784 Msa0414540:CDS 45.0%
ATGCGACAATCCATCAAGCA+AGG - chr3_2:60084891-60084910 Msa0414540:CDS 45.0%
GCTAATCACTGTCACTGACA+AGG + chr3_2:60085493-60085512 None:intergenic 45.0%
! GTCAGTGACAGTGATTAGCT+AGG - chr3_2:60085494-60085513 Msa0414540:five_prime_UTR 45.0%
!!! ACCACCCTTTTTCAGGATAC+TGG + chr3_2:60085644-60085663 None:intergenic 45.0%
! AGTTTGCACCACCCTTTTTC+AGG + chr3_2:60085651-60085670 None:intergenic 45.0%
TCTGCAATTGCCAAGCTTCC+GGG + chr3_2:60084297-60084316 None:intergenic 50.0%
GTCTGCAATTGCCAAGCTTC+CGG + chr3_2:60084298-60084317 None:intergenic 50.0%
!! GCAGACTTGGGTTGCTCTTT+TGG - chr3_2:60084312-60084331 Msa0414540:CDS 50.0%
AGGCCCGTGTTACATCTATG+GGG - chr3_2:60084521-60084540 Msa0414540:CDS 50.0%
! TTGTTGTTGTCAGCACCCTC+TGG + chr3_2:60084721-60084740 None:intergenic 50.0%
!! GAGGGTGCTGACAACAACAA+AGG - chr3_2:60084721-60084740 Msa0414540:CDS 50.0%
TTGAGGGGCTTGTGCTTGTA+AGG + chr3_2:60084756-60084775 None:intergenic 50.0%
GCCAGTATCCTGAAAAAGGG+TGG - chr3_2:60085640-60085659 Msa0414540:five_prime_UTR 50.0%
TCTGCAATTGCCAAGCTTCC+GGG + chr3_2:60084297-60084316 None:intergenic 50.0%
GTCTGCAATTGCCAAGCTTC+CGG + chr3_2:60084298-60084317 None:intergenic 50.0%
!! GCAGACTTGGGTTGCTCTTT+TGG - chr3_2:60084312-60084331 Msa0414540:CDS 50.0%
AGGCCCGTGTTACATCTATG+GGG - chr3_2:60084521-60084540 Msa0414540:CDS 50.0%
! TTGTTGTTGTCAGCACCCTC+TGG + chr3_2:60084721-60084740 None:intergenic 50.0%
!! GAGGGTGCTGACAACAACAA+AGG - chr3_2:60084721-60084740 Msa0414540:CDS 50.0%
TTGAGGGGCTTGTGCTTGTA+AGG + chr3_2:60084756-60084775 None:intergenic 50.0%
GCCAGTATCCTGAAAAAGGG+TGG - chr3_2:60085640-60085659 Msa0414540:five_prime_UTR 50.0%
CAACACATTCCCCGGAAGCT+TGG - chr3_2:60084284-60084303 Msa0414540:CDS 55.0%
CTGCAATTGCCAAGCTTCCG+GGG + chr3_2:60084296-60084315 None:intergenic 55.0%
GGCACAATGCATTAGGGCTG+TGG - chr3_2:60085252-60085271 Msa0414540:CDS 55.0%
CAACACATTCCCCGGAAGCT+TGG - chr3_2:60084284-60084303 Msa0414540:CDS 55.0%
CTGCAATTGCCAAGCTTCCG+GGG + chr3_2:60084296-60084315 None:intergenic 55.0%
GGCACAATGCATTAGGGCTG+TGG - chr3_2:60085252-60085271 Msa0414540:CDS 55.0%
Chromosome Type Strat End Strand Name
chr3_2 gene 60083807 60085829 60083807 ID=Msa0414540;Name=Msa0414540
chr3_2 mRNA 60083807 60085829 60083807 ID=Msa0414540-mRNA-1;Parent=Msa0414540;Name=Msa0414540-mRNA-1;_AED=0.07;_eAED=0.07;_QI=355|1|1|1|1|1|3|412|366
chr3_2 exon 60083807 60084596 60083807 ID=Msa0414540-mRNA-1:exon:12533;Parent=Msa0414540-mRNA-1
chr3_2 exon 60084667 60084921 60084667 ID=Msa0414540-mRNA-1:exon:12532;Parent=Msa0414540-mRNA-1
chr3_2 exon 60085007 60085829 60085007 ID=Msa0414540-mRNA-1:exon:12531;Parent=Msa0414540-mRNA-1
chr3_2 five_prime_UTR 60085475 60085829 60085475 ID=Msa0414540-mRNA-1:five_prime_utr;Parent=Msa0414540-mRNA-1
chr3_2 CDS 60085007 60085474 60085007 ID=Msa0414540-mRNA-1:cds;Parent=Msa0414540-mRNA-1
chr3_2 CDS 60084667 60084921 60084667 ID=Msa0414540-mRNA-1:cds;Parent=Msa0414540-mRNA-1
chr3_2 CDS 60084219 60084596 60084219 ID=Msa0414540-mRNA-1:cds;Parent=Msa0414540-mRNA-1
chr3_2 three_prime_UTR 60083807 60084218 60083807 ID=Msa0414540-mRNA-1:three_prime_utr;Parent=Msa0414540-mRNA-1
Gene Sequence

>Msa0414540

ATGCATATAGCCAGTCTATATTATATGGGATCTGAATTTTATGCATCAATTGTAAATACGCAGCGAAAGGTGATTTCTTTAACAAAACCTTTGAGAGACGAAGCCATAACCAACCTATATTGCAACACATTCCCCGGAAGCTTGGCAATTGCAGACTTGGGTTGCTCTTTTGGACCAAACACTTTGTTGGTGATATCAGAAATTATCAAAGGTGTGGAAAAACTTTGTAAAGTGCATCATCATAAATCTCCCGAATATAAAGTATTTTTGAATGATCTACCGGGAAATGACTTCAACAACGTATTCAAGTCCCTTGACACCTTCAAAGAGAAACTATGTGATGAAATGGAAACTGAAATAGGCCCGTGTTACATCTATGGGGTTCCTGGTTCATTTTATGGCAGAATTTTTCCAGATAATAGTTTGCATTTTGTTCATTCCTCGTACAGTCTTCAATGGCTATCTAAGGTTCCAGAGGGTGCTGACAACAACAAAGGAAACATTTACCTTACAAGCACAAGCCCCTCAAATGTCATCAAGGCTTACTACAAGCAATTTCGAACAGATTTCTCTTTTTTTCTTCGGTGTCGTGCCAAAGAATTAGTTGAAGGTGCTCAAATGATTCTAACACTTCTAGGAAGAAAATGCGACAATCCATCAAGCAAGGAGTGTTGTTACATTTGGGAACTCATGGCTATCTCCCTTAATGATATGGTCTTAGAGGGAATCATTAACGAAGAGAAAATCAATACTTTCAACATCCCTAACTATTATCCATCTCCATCTGAAGTGAAGTTGGAAGTTCTCAAAGAAGGATCATTTGTCATCAATAAATTGGAGGTTTCTGAAGTTAATTGGAATGCTCTTGATGATTGTAATGCCTATGACTTTGAATCTGAAATGTCAGAATCACTTAGAGATGATGGATACAATATGGCACAATGCATTAGGGCTGTGGCTGAACCTTTGCTAGTTAGTCACTTTGGTGAAGGTGTCATTAAGGAGATTTTTGACCGCTATAGAAAAATTTTAACTTATCGGATGTCCAAAGAGAAGACTAAGTTCACCAATCTTAGCATATCGTTGACAAGAAAACCATGA
Protein sequence

>Msa0414540

MHIASLYYMGSEFYASIVNTQRKVISLTKPLRDEAITNLYCNTFPGSLAIADLGCSFGPNTLLVISEIIKGVEKLCKVHHHKSPEYKVFLNDLPGNDFNNVFKSLDTFKEKLCDEMETEIGPCYIYGVPGSFYGRIFPDNSLHFVHSSYSLQWLSKVPEGADNNKGNIYLTSTSPSNVIKAYYKQFRTDFSFFLRCRAKELVEGAQMILTLLGRKCDNPSSKECCYIWELMAISLNDMVLEGIINEEKINTFNIPNYYPSPSEVKLEVLKEGSFVINKLEVSEVNWNALDDCNAYDFESEMSESLRDDGYNMAQCIRAVAEPLLVSHFGEGVIKEIFDRYRKILTYRMSKEKTKFTNLSISLTRKP*