AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0564000

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0564000 MtrunA17_Chr8g0377941 94.937 474 20 3 1 472 1 472 0.0 907
Msa0564000 MtrunA17_Chr8g0377921 62.526 475 146 9 6 461 3 464 0.0 581
Msa0564000 MtrunA17_Chr3g0121991 57.637 491 168 12 1 467 74 548 0.0 539
Msa0564000 MtrunA17_Chr3g0122001 57.025 484 172 12 1 460 481 952 1.70e-178 525
Msa0564000 MtrunA17_Chr3g0122001 56.187 493 177 13 1 469 1 478 3.32e-175 516
Msa0564000 MtrunA17_Chr5g0414331 39.355 465 241 13 8 458 14 451 1.13e-105 322
Msa0564000 MtrunA17_Chr5g0414321 38.559 472 247 13 8 464 12 455 1.52e-102 314
Msa0564000 MtrunA17_Chr1g0207981 37.657 478 258 13 8 462 14 474 2.97e-99 306
Msa0564000 MtrunA17_Chr6g0464881 39.703 471 240 14 9 462 13 456 3.70e-99 305
Msa0564000 MtrunA17_Chr6g0464871 40.343 466 246 15 3 457 19 463 4.03e-98 303
Msa0564000 MtrunA17_Chr6g0464921 40.506 474 243 14 4 462 8 457 5.33e-98 302
Msa0564000 MtrunA17_Chr6g0464841 39.914 466 236 13 9 457 13 451 1.47e-96 298
Msa0564000 MtrunA17_Chr6g0464861 39.316 468 247 14 3 457 7 450 1.97e-95 295
Msa0564000 MtrunA17_Chr7g0250001 38.936 470 241 13 9 461 8 448 2.64e-92 287
Msa0564000 MtrunA17_Chr3g0098111 36.498 474 266 12 8 460 10 469 9.56e-92 286
Msa0564000 MtrunA17_Chr8g0380531 38.034 468 254 14 8 460 11 457 7.26e-91 284
Msa0564000 MtrunA17_Chr4g0053501 34.801 477 271 12 8 464 12 468 1.11e-87 277
Msa0564000 MtrunA17_Chr1g0207861 37.083 480 265 13 8 466 9 472 1.54e-85 271
Msa0564000 MtrunA17_Chr1g0161351 36.920 474 270 11 5 460 35 497 2.61e-85 271
Msa0564000 MtrunA17_Chr7g0249981 38.085 470 245 16 9 461 27 467 2.72e-85 270
Msa0564000 MtrunA17_Chr7g0249931 38.004 471 246 17 9 461 42 484 4.14e-85 270
Msa0564000 MtrunA17_Chr4g0053321 35.789 475 269 12 8 464 27 483 5.16e-84 267
Msa0564000 MtrunA17_Chr8g0365811 35.908 479 264 14 8 460 496 957 3.13e-80 268
Msa0564000 MtrunA17_Chr8g0365811 35.343 481 268 12 8 460 10 475 4.72e-78 262
Msa0564000 MtrunA17_Chr1g0207951 35.032 471 279 12 8 465 657 1113 1.89e-78 265
Msa0564000 MtrunA17_Chr1g0207951 34.096 481 254 11 8 460 125 570 3.47e-76 258
Msa0564000 MtrunA17_Chr1g0207971 34.845 485 256 15 8 466 9 459 5.31e-78 250
Msa0564000 MtrunA17_Chr1g0207831 33.898 472 276 10 8 460 9 463 1.54e-74 242
Msa0564000 MtrunA17_Chr5g0393591 33.120 468 248 14 8 460 18 435 2.33e-74 241
Msa0564000 MtrunA17_Chr5g0401721 31.120 482 285 14 8 461 9 471 1.62e-73 239
Msa0564000 MtrunA17_Chr1g0207931 33.263 475 225 14 8 460 93 497 5.46e-68 226
Msa0564000 MtrunA17_Chr7g0249961 47.009 234 103 6 242 461 34 260 5.36e-63 205
Msa0564000 MtrunA17_Chr3g0118671 29.508 488 296 12 9 465 8 478 5.34e-61 206
Msa0564000 MtrunA17_Chr1g0207881 31.210 471 211 11 8 460 9 384 1.82e-59 200
Msa0564000 MtrunA17_Chr3g0118771 29.735 491 293 15 8 465 22 493 1.46e-57 197
Msa0564000 MtrunA17_Chr5g0431441 30.398 477 280 12 8 461 19 466 1.80e-57 197
Msa0564000 MtrunA17_Chr2g0278711 30.785 484 287 14 9 462 13 478 3.23e-57 196
Msa0564000 MtrunA17_Chr3g0118711 29.412 493 290 14 9 465 15 485 4.52e-57 196
Msa0564000 MtrunA17_Chr5g0426431 30.408 490 285 15 8 463 13 480 9.14e-57 195
Msa0564000 MtrunA17_Chr6g0454341 29.774 487 294 15 8 463 11 480 1.62e-56 194
Msa0564000 MtrunA17_Chr3g0106231 30.704 469 285 14 1 461 16 452 2.40e-56 194
Msa0564000 MtrunA17_Chr5g0431421 29.747 474 278 14 8 461 11 449 3.35e-56 193
Msa0564000 MtrunA17_Chr8g0336331 29.857 489 288 14 9 463 12 479 7.72e-56 193
Msa0564000 MtrunA17_Chr5g0431361 29.787 470 284 14 8 460 13 453 9.49e-56 192
Msa0564000 MtrunA17_Chr5g0431401 29.095 464 292 14 8 460 11 448 8.58e-55 189
Msa0564000 MtrunA17_Chr3g0118701 29.091 495 289 15 9 465 17 487 4.03e-54 188
Msa0564000 MtrunA17_Chr6g0454301 29.796 490 288 16 9 463 265 733 4.77e-54 192
Msa0564000 MtrunA17_Chr6g0454301 33.491 212 127 3 255 459 24 228 5.40e-33 132
Msa0564000 MtrunA17_Chr3g0118691 28.953 487 300 15 9 465 17 487 1.97e-52 184
Msa0564000 MtrunA17_Chr3g0092641 30.123 488 287 17 8 462 13 479 2.65e-52 183
Msa0564000 MtrunA17_Chr6g0454181 29.878 492 287 13 9 463 12 482 3.49e-52 183
Msa0564000 MtrunA17_Chr3g0078841 29.713 488 291 15 9 463 12 480 6.84e-52 182
Msa0564000 MtrunA17_Chr7g0243631 29.518 498 291 17 3 460 9 486 1.29e-51 182
Msa0564000 MtrunA17_Chr7g0218811 29.718 461 283 14 9 458 17 447 2.35e-51 180
Msa0564000 MtrunA17_Chr6g0454191 30.364 494 283 16 9 463 12 483 3.75e-51 180
Msa0564000 MtrunA17_Chr3g0118721 35.314 303 167 7 180 465 4 294 4.10e-51 175
Msa0564000 MtrunA17_Chr4g0050341 29.132 484 283 14 8 452 20 482 6.74e-51 180
Msa0564000 MtrunA17_Chr7g0243681 30.321 498 284 19 2 460 6 479 1.40e-50 179
Msa0564000 MtrunA17_Chr5g0412111 30.000 480 285 15 8 460 6 461 3.79e-50 177
Msa0564000 MtrunA17_Chr5g0431371 28.903 474 280 15 8 460 11 448 3.80e-50 177
Msa0564000 MtrunA17_Chr3g0112771 31.423 471 279 14 6 461 11 452 4.48e-50 177
Msa0564000 MtrunA17_Chr5g0432731 33.333 303 189 5 164 461 3 297 6.51e-50 172
Msa0564000 MtrunA17_Chr3g0112761 30.625 480 269 15 8 461 9 450 8.41e-50 176
Msa0564000 MtrunA17_Chr6g0454361 29.424 486 297 16 9 463 13 483 1.71e-49 176
Msa0564000 MtrunA17_Chr6g0454321 29.167 480 276 15 9 449 12 466 1.89e-49 179
Msa0564000 MtrunA17_Chr7g0217881 30.785 484 275 17 9 463 12 464 1.17e-48 173
Msa0564000 MtrunA17_Chr7g0218791 29.787 470 276 17 9 458 7 442 2.15e-48 172
Msa0564000 MtrunA17_Chr4g0032331 29.736 454 263 15 6 436 7 427 2.40e-48 172
Msa0564000 MtrunA17_Chr7g0218831 29.348 460 283 15 9 457 8 436 5.56e-48 171
Msa0564000 MtrunA17_Chr3g0106251 38.281 256 153 4 219 472 52 304 7.04e-48 167
Msa0564000 MtrunA17_Chr8g0377911 55.405 148 60 3 1 148 1 142 1.07e-47 161
Msa0564000 MtrunA17_Chr6g0454401 28.827 503 283 19 9 465 12 485 2.14e-47 170
Msa0564000 MtrunA17_Chr7g0243801 31.452 372 217 11 115 460 117 476 2.97e-47 170
Msa0564000 MtrunA17_Chr7g0218821 28.450 471 287 15 9 458 7 448 3.18e-47 169
Msa0564000 MtrunA17_Chr7g0265101 31.122 392 221 12 110 467 117 493 3.24e-47 170
Msa0564000 MtrunA17_Chr6g0454331 28.715 498 303 14 1 463 1 481 3.28e-47 170
Msa0564000 MtrunA17_Chr7g0243771 31.452 372 217 11 115 460 116 475 5.56e-47 169
Msa0564000 MtrunA17_Chr6g0454201 29.555 494 286 15 9 463 13 483 5.70e-47 169
Msa0564000 MtrunA17_Chr6g0454291 30.478 502 287 18 1 463 1 479 8.69e-47 168
Msa0564000 MtrunA17_Chr6g0454261 28.629 496 288 15 9 463 12 482 1.05e-46 168
Msa0564000 MtrunA17_Chr6g0454151 28.205 507 276 16 9 464 12 481 1.33e-46 168
Msa0564000 MtrunA17_Chr7g0218841 28.446 457 292 13 9 457 8 437 5.12e-46 166
Msa0564000 MtrunA17_Chr5g0412131 29.485 485 282 15 8 460 13 469 5.36e-46 166
Msa0564000 MtrunA17_Chr5g0426401 35.987 314 167 11 168 462 14 312 7.64e-46 162
Msa0564000 MtrunA17_Chr5g0419771 28.200 500 290 17 8 461 37 513 7.88e-46 167
Msa0564000 MtrunA17_Chr7g0243951 28.081 495 303 16 2 460 6 483 8.31e-46 166
Msa0564000 MtrunA17_Chr3g0118661 28.953 487 289 14 8 459 14 478 1.20e-45 166
Msa0564000 MtrunA17_Chr5g0412101 29.098 488 281 15 8 460 13 470 1.31e-45 165
Msa0564000 MtrunA17_Chr6g0453951 28.024 496 293 17 9 464 59 530 1.83e-45 166
Msa0564000 MtrunA17_Chr8g0361371 28.455 492 292 16 1 457 1 467 2.22e-45 164
Msa0564000 MtrunA17_Chr7g0243871 39.231 260 135 7 220 460 217 472 2.25e-45 165
Msa0564000 MtrunA17_Chr8g0335141 29.289 478 280 12 8 453 10 461 4.03e-45 164
Msa0564000 MtrunA17_Chr8g0359821 28.195 493 292 14 9 463 12 480 4.97e-45 164
Msa0564000 MtrunA17_Chr7g0265051 28.629 496 302 18 10 467 10 491 1.06e-44 163
Msa0564000 MtrunA17_Chr3g0118751 27.329 483 286 15 8 465 7 449 1.79e-44 161
Msa0564000 MtrunA17_Chr6g0449931 38.846 260 126 7 219 453 209 460 3.27e-44 161
Msa0564000 MtrunA17_Chr6g0459311 29.053 475 284 14 8 453 14 464 3.89e-44 161
Msa0564000 MtrunA17_Chr5g0423981 28.898 481 271 18 9 463 12 447 1.32e-43 159
Msa0564000 MtrunA17_Chr6g0454141 27.565 497 292 16 9 463 12 482 1.62e-43 159
Msa0564000 MtrunA17_Chr6g0486251 29.325 474 284 15 8 453 7 457 1.65e-43 159
Msa0564000 MtrunA17_Chr6g0486201 29.325 474 284 15 8 453 7 457 1.65e-43 159
Msa0564000 MtrunA17_Chr6g0454131 29.577 497 281 18 9 463 12 481 2.76e-43 159
Msa0564000 MtrunA17_Chr6g0454121 29.175 497 283 17 9 463 12 481 2.98e-43 159
Msa0564000 MtrunA17_Chr7g0232411 36.680 259 138 7 219 456 208 461 3.65e-43 158
Msa0564000 MtrunA17_Chr7g0235051 34.824 313 171 8 173 459 147 452 4.56e-43 158
Msa0564000 MtrunA17_Chr6g0452771 28.112 498 288 14 9 463 12 482 5.13e-43 158
Msa0564000 MtrunA17_Chr7g0243781 28.306 484 298 14 8 460 10 475 8.17e-43 158
Msa0564000 MtrunA17_Chr7g0243931 27.926 487 303 14 8 460 18 490 9.12e-43 158
Msa0564000 MtrunA17_Chr7g0232391 37.109 256 135 7 219 453 208 458 1.36e-42 157
Msa0564000 MtrunA17_Chr7g0243761 28.866 485 283 19 2 460 6 454 2.28e-42 156
Msa0564000 MtrunA17_Chr8g0335161 28.452 478 285 15 8 453 7 459 2.73e-42 156
Msa0564000 MtrunA17_Chr6g0453961 28.571 497 288 15 9 463 21 492 3.54e-42 156
Msa0564000 MtrunA17_Chr6g0454221 37.768 233 121 5 243 459 5 229 4.05e-42 151
Msa0564000 MtrunA17_Chr6g0454211 28.373 504 295 17 1 463 291 769 8.66e-42 158
Msa0564000 MtrunA17_Chr6g0454211 32.850 207 100 9 173 371 61 236 2.03e-18 88.6
Msa0564000 MtrunA17_Chr6g0462571 29.106 481 283 20 10 458 5 459 9.31e-42 155
Msa0564000 MtrunA17_Chr2g0307961 29.339 484 292 18 5 462 11 470 3.20e-41 153
Msa0564000 MtrunA17_Chr4g0060511 26.369 493 318 13 2 460 6 487 5.54e-41 153
Msa0564000 MtrunA17_Chr6g0462541 28.686 373 233 9 103 458 105 461 7.74e-41 152
Msa0564000 MtrunA17_Chr4g0014061 27.778 486 291 16 8 458 10 470 7.88e-41 152
Msa0564000 MtrunA17_Chr8g0339451 31.070 383 220 14 103 456 92 459 1.25e-40 151
Msa0564000 MtrunA17_Chr4g0066281 27.686 484 285 14 10 460 15 466 1.83e-40 151
Msa0564000 MtrunA17_Chr7g0243861 27.733 494 307 15 2 460 9 487 1.86e-40 151
Msa0564000 MtrunA17_Chr8g0334831 36.585 246 112 7 219 430 212 447 2.07e-40 151
Msa0564000 MtrunA17_Chr4g0011051 28.158 380 233 10 112 461 119 488 2.20e-40 151
Msa0564000 MtrunA17_Chr4g0072761 27.130 446 297 10 8 447 16 439 3.14e-40 150
Msa0564000 MtrunA17_Chr1g0179901 26.471 510 287 17 8 461 17 494 3.28e-40 151
Msa0564000 MtrunA17_Chr8g0336731 31.099 373 211 12 112 457 134 487 5.02e-40 150
Msa0564000 MtrunA17_Chr4g0072771 25.934 455 306 14 8 453 26 458 6.01e-40 149
Msa0564000 MtrunA17_Chr4g0042891 31.563 339 179 13 150 457 146 462 8.12e-40 149
Msa0564000 MtrunA17_Chr7g0232401 28.421 475 296 16 8 456 7 463 8.90e-40 149
Msa0564000 MtrunA17_Chr7g0250021 33.728 338 185 14 9 332 14 326 1.08e-39 145
Msa0564000 MtrunA17_Chr6g0462521 27.826 460 287 13 10 449 5 439 1.24e-39 149
Msa0564000 MtrunA17_Chr7g0265141 28.056 499 300 17 4 461 6 486 1.49e-39 149
Msa0564000 MtrunA17_Chr8g0339631 29.659 381 225 11 103 456 100 464 2.39e-39 148
Msa0564000 MtrunA17_Chr4g0044511 28.195 493 301 20 1 460 32 504 2.41e-39 149
Msa0564000 MtrunA17_Chr7g0232341 29.194 459 257 19 8 429 7 434 2.71e-39 148
Msa0564000 MtrunA17_Chr8g0347281 35.156 256 137 6 219 453 218 465 2.76e-39 148
Msa0564000 MtrunA17_Chr7g0275681 28.600 493 285 18 11 461 14 481 7.80e-39 147
Msa0564000 MtrunA17_Chr6g0462531 28.747 487 276 19 10 456 5 460 8.94e-39 146
Msa0564000 MtrunA17_Chr8g0336651 32.800 375 200 15 112 456 108 460 1.08e-38 150
Msa0564000 MtrunA17_Chr8g0336651 37.083 240 132 5 219 456 548 770 8.64e-37 144
Msa0564000 MtrunA17_Chr8g0336651 35.361 263 139 8 219 456 983 1239 6.79e-36 142
Msa0564000 MtrunA17_Chr7g0232331 39.224 232 115 8 219 429 208 434 1.80e-38 145
Msa0564000 MtrunA17_Chr8g0339601 34.132 334 175 15 153 456 8 326 1.96e-38 142
Msa0564000 MtrunA17_Chr4g0066261 27.033 492 294 15 10 460 14 481 2.13e-38 145
Msa0564000 MtrunA17_Chr7g0265111 32.493 357 202 14 143 466 171 521 2.62e-38 146
Msa0564000 MtrunA17_Chr5g0448551 26.971 482 302 18 1 464 1 450 2.73e-38 145
Msa0564000 MtrunA17_Chr8g0339461 32.895 380 199 15 112 456 109 467 4.12e-38 144
Msa0564000 MtrunA17_Chr8g0347271 31.454 337 154 11 184 453 140 466 4.28e-38 144
Msa0564000 MtrunA17_Chr5g0442581 25.195 512 305 16 8 471 6 487 5.48e-38 145
Msa0564000 MtrunA17_Chr4g0066201 26.639 488 291 16 8 460 19 474 7.09e-38 144
Msa0564000 MtrunA17_Chr8g0336691 28.926 484 283 16 8 456 918 1375 7.53e-38 147
Msa0564000 MtrunA17_Chr8g0336691 34.155 284 152 9 198 456 196 469 1.26e-34 138
Msa0564000 MtrunA17_Chr8g0336691 37.344 241 134 8 219 456 682 908 1.79e-34 137
Msa0564000 MtrunA17_Chr4g0066221 25.859 495 307 13 10 466 14 486 7.65e-38 144
Msa0564000 MtrunA17_Chr6g0454351 27.143 490 286 19 9 463 14 467 1.01e-37 143
Msa0564000 MtrunA17_Chr4g0066151 27.160 486 296 15 8 460 19 479 1.24e-37 144
Msa0564000 MtrunA17_Chr8g0336741 35.907 259 139 7 219 456 215 467 2.16e-37 142
Msa0564000 MtrunA17_Chr3g0079731 27.181 493 292 15 10 457 7 477 2.78e-37 142
Msa0564000 MtrunA17_Chr6g0454271 30.640 297 176 7 183 463 7 289 4.56e-37 137
Msa0564000 MtrunA17_Chr1g0153451 34.231 260 141 7 219 456 208 459 5.13e-37 141
Msa0564000 MtrunA17_Chr5g0440421 26.854 499 305 19 8 461 11 494 5.58e-37 142
Msa0564000 MtrunA17_Chr7g0232311 30.704 355 203 14 128 457 124 460 6.99e-37 141
Msa0564000 MtrunA17_Chr7g0265151 31.618 272 155 6 219 461 215 484 8.76e-37 141
Msa0564000 MtrunA17_Chr5g0442561 24.800 500 298 12 8 461 6 473 8.83e-37 141
Msa0564000 MtrunA17_Chr5g0442601 24.949 493 310 12 8 461 405 876 2.00e-36 143
Msa0564000 MtrunA17_Chr5g0442601 32.967 182 100 4 233 394 154 333 5.14e-24 105
Msa0564000 MtrunA17_Chr7g0265041 27.054 499 304 19 10 465 12 493 2.18e-36 140
Msa0564000 MtrunA17_Chr5g0431431 39.086 197 111 2 219 415 156 343 3.31e-36 137
Msa0564000 MtrunA17_Chr4g0066171 27.219 507 263 19 8 460 22 476 3.98e-36 139
Msa0564000 MtrunA17_Chr4g0042931 30.581 327 182 11 158 457 152 460 5.82e-36 139
Msa0564000 MtrunA17_Chr8g0373301 26.681 476 299 17 8 456 10 462 7.59e-36 138
Msa0564000 MtrunA17_Chr6g0462551 34.241 257 145 8 219 458 213 462 1.36e-35 137
Msa0564000 MtrunA17_Chr7g0243711 36.574 216 120 5 262 460 101 316 1.80e-35 134
Msa0564000 MtrunA17_Chr2g0329111 27.686 484 302 14 8 457 7 476 2.58e-35 137
Msa0564000 MtrunA17_Chr8g0374971 25.845 503 288 17 8 460 13 480 3.26e-35 137
Msa0564000 MtrunA17_Chr8g0374901 29.268 328 185 9 165 460 166 478 4.15e-35 136
Msa0564000 MtrunA17_Chr7g0275511 27.515 487 280 20 1 447 9 462 9.81e-35 135
Msa0564000 MtrunA17_Chr5g0429711 32.278 316 186 12 162 464 165 465 1.12e-34 135
Msa0564000 MtrunA17_Chr7g0243851 33.083 266 153 4 220 460 177 442 1.35e-34 134
Msa0564000 MtrunA17_Chr8g0382021 34.762 210 118 3 269 460 280 488 1.60e-34 135
Msa0564000 MtrunA17_Chr5g0403641 32.886 298 163 7 198 462 211 504 1.62e-34 135
Msa0564000 MtrunA17_Chr6g0454171 33.206 262 135 7 219 463 74 312 2.07e-34 131
Msa0564000 MtrunA17_Chr1g0159551 35.749 207 117 4 269 460 254 459 7.13e-34 132
Msa0564000 MtrunA17_Chr5g0442521 29.305 331 188 10 162 461 161 476 7.70e-34 132
Msa0564000 MtrunA17_Chr1g0173121 36.232 207 116 4 269 460 257 462 8.69e-34 132
Msa0564000 MtrunA17_Chr6g0463861 33.486 218 122 3 266 460 256 473 9.31e-34 132
Msa0564000 MtrunA17_Chr5g0448521 31.481 270 155 4 219 461 202 468 1.16e-33 132
Msa0564000 MtrunA17_Chr7g0243911 41.530 183 90 4 267 432 20 202 1.42e-33 126
Msa0564000 MtrunA17_Chr8g0366391 26.132 486 308 15 8 460 10 477 1.81e-33 132
Msa0564000 MtrunA17_Chr1g0153461 36.190 210 111 5 267 456 2 208 2.62e-33 125
Msa0564000 MtrunA17_Chr8g0374941 31.290 310 179 9 185 460 1108 1417 2.69e-33 134
Msa0564000 MtrunA17_Chr8g0374941 35.784 204 108 4 266 446 262 465 7.55e-30 124
Msa0564000 MtrunA17_Chr8g0374941 27.922 308 181 9 164 442 631 926 1.04e-26 114
Msa0564000 MtrunA17_Chr4g0066131 26.789 489 290 18 8 458 14 472 3.59e-33 131
Msa0564000 MtrunA17_Chr8g0355011 36.788 193 108 3 278 463 179 364 4.67e-33 128
Msa0564000 MtrunA17_Chr8g0334851 27.010 485 282 18 8 451 7 460 5.50e-33 130
Msa0564000 MtrunA17_Chr4g0044501 28.378 370 227 14 115 460 120 475 1.04e-32 129
Msa0564000 MtrunA17_Chr5g0442541 25.794 504 285 17 8 463 6 468 1.58e-32 129
Msa0564000 MtrunA17_Chr1g0165701 37.681 207 114 3 269 460 277 483 1.62e-32 129
Msa0564000 MtrunA17_Chr5g0442491 31.136 273 150 7 219 461 211 475 2.62e-32 128
Msa0564000 MtrunA17_Chr6g0454251 28.186 408 244 15 1 372 1 395 2.78e-32 127
Msa0564000 MtrunA17_Chr7g0243611 33.770 305 154 11 120 402 1 279 3.44e-32 124
Msa0564000 MtrunA17_Chr2g0302961 24.074 486 310 14 8 460 6 465 5.21e-32 127
Msa0564000 MtrunA17_Chr8g0334861 35.686 255 129 9 219 447 205 450 7.41e-32 127
Msa0564000 MtrunA17_Chr4g0044521 31.818 308 179 9 173 457 164 463 9.52e-32 127
Msa0564000 MtrunA17_Chr6g0454371 35.165 182 104 3 291 465 1 175 1.26e-31 119
Msa0564000 MtrunA17_Chr5g0442511 29.213 267 161 4 219 460 230 493 1.96e-31 126
Msa0564000 MtrunA17_Chr6g0482061 25.458 491 285 16 17 459 21 478 3.00e-31 125
Msa0564000 MtrunA17_Chr5g0419761 25.918 490 312 16 9 461 11 486 3.08e-31 125
Msa0564000 MtrunA17_Chr8g0355221 35.885 209 117 3 269 460 278 486 5.36e-31 125
Msa0564000 MtrunA17_Chr8g0339441 26.273 491 248 15 8 456 7 425 7.29e-31 124
Msa0564000 MtrunA17_Chr2g0278721 25.926 459 298 15 8 445 518 955 1.20e-30 125
Msa0564000 MtrunA17_Chr2g0278721 24.944 445 292 15 8 432 16 438 3.06e-21 97.4
Msa0564000 MtrunA17_Chr5g0409591 24.180 488 270 14 8 432 5 455 1.33e-30 124
Msa0564000 MtrunA17_Chr5g0429681 34.848 264 146 10 219 464 248 503 1.60e-30 124
Msa0564000 MtrunA17_Chr5g0410941 25.992 504 296 14 8 466 24 495 3.08e-30 122
Msa0564000 MtrunA17_Chr7g0241801 26.237 465 280 14 8 461 10 422 4.00e-30 121
Msa0564000 MtrunA17_Chr5g0401851 36.364 209 117 4 268 460 275 483 9.75e-30 121
Msa0564000 MtrunA17_Chr7g0241781 25.855 468 278 17 8 461 10 422 1.70e-29 120
Msa0564000 MtrunA17_Chr1g0196851 25.217 460 295 14 1 436 41 475 2.95e-29 120
Msa0564000 MtrunA17_Chr8g0361411 27.557 479 287 21 8 460 9 453 3.49e-29 119
Msa0564000 MtrunA17_Chr8g0350881 33.803 213 118 3 271 460 268 480 3.73e-29 119
Msa0564000 MtrunA17_Chr5g0420801 26.752 471 294 20 1 446 1 445 1.18e-28 118
Msa0564000 MtrunA17_Chr6g0463851 32.558 215 118 4 271 460 270 482 1.63e-28 117
Msa0564000 MtrunA17_Chr8g0369341 26.423 492 300 18 1 457 1 465 4.15e-28 116
Msa0564000 MtrunA17_Chr7g0243811 30.976 297 182 7 115 401 99 382 4.56e-28 115
Msa0564000 MtrunA17_Chr2g0302991 28.788 264 159 8 219 460 206 462 5.31e-28 116
Msa0564000 MtrunA17_Chr8g0370941 25.347 505 274 19 8 447 9 475 5.42e-28 116
Msa0564000 MtrunA17_Chr8g0374931 33.180 217 123 4 266 460 265 481 6.69e-28 116
Msa0564000 MtrunA17_Chr5g0428081 25.051 491 303 12 10 460 14 479 8.18e-28 115
Msa0564000 MtrunA17_Chr7g0218311 32.743 226 130 3 263 466 264 489 8.88e-28 115
Msa0564000 MtrunA17_Chr2g0294931 25.203 492 307 13 8 460 12 481 1.83e-27 114
Msa0564000 MtrunA17_Chr5g0416821 23.848 499 294 14 8 460 15 473 2.78e-27 114
Msa0564000 MtrunA17_Chr5g0416741 32.864 213 128 3 263 460 271 483 3.82e-27 114
Msa0564000 MtrunA17_Chr4g0029131 25.778 450 286 17 8 436 13 435 9.77e-27 113
Msa0564000 MtrunA17_Chr2g0294941 34.673 199 108 4 266 442 163 361 1.58e-26 110
Msa0564000 MtrunA17_Chr4g0044481 41.135 141 76 2 266 399 262 402 3.47e-26 110
Msa0564000 MtrunA17_Chr6g0463891 32.589 224 130 3 253 460 266 484 3.69e-26 110
Msa0564000 MtrunA17_Chr4g0029151 25.328 458 278 18 8 436 21 443 6.88e-26 110
Msa0564000 MtrunA17_Chr7g0232351 38.857 175 81 7 219 371 208 378 4.70e-25 106
Msa0564000 MtrunA17_Chr3g0079711 35.359 181 93 5 295 453 3 181 6.88e-25 101
Msa0564000 MtrunA17_Chr2g0283041 22.979 470 323 14 10 461 8 456 8.04e-25 106
Msa0564000 MtrunA17_Chr8g0367221 25.482 467 279 16 8 438 799 1232 8.39e-25 108
Msa0564000 MtrunA17_Chr8g0367221 24.681 470 278 15 8 438 13 445 3.34e-23 103
Msa0564000 MtrunA17_Chr8g0367221 23.504 468 287 15 8 438 1289 1722 1.16e-20 95.9
Msa0564000 MtrunA17_Chr8g0336261 40.164 122 66 1 291 405 1 122 1.12e-24 99.4
Msa0564000 MtrunA17_Chr2g0294921 24.131 489 316 13 8 460 161 630 1.90e-24 106
Msa0564000 MtrunA17_Chr2g0319761 25.941 478 299 16 8 468 9 448 2.65e-24 105
Msa0564000 MtrunA17_Chr8g0337381 44.000 125 63 3 333 456 3 121 4.36e-24 97.4
Msa0564000 MtrunA17_Chr2g0302851 25.000 444 288 18 8 432 17 434 2.43e-23 102
Msa0564000 MtrunA17_Chr6g0454231 29.572 257 131 9 214 461 4 219 3.29e-23 102
Msa0564000 MtrunA17_Chr2g0319731 25.272 459 284 17 8 438 26 453 8.88e-23 100
Msa0564000 MtrunA17_Chr4g0069611 31.111 225 140 8 218 432 214 433 2.88e-22 99.4
Msa0564000 MtrunA17_Chr4g0066141 35.669 157 89 3 312 460 199 351 1.11e-21 96.3
Msa0564000 MtrunA17_Chr2g0278741 24.532 481 299 21 8 461 98 541 5.63e-21 95.9
Msa0564000 MtrunA17_Chr2g0319791 32.609 230 119 9 257 469 239 449 5.73e-21 95.1
Msa0564000 MtrunA17_Chr8g0336321 33.898 236 136 8 218 439 215 444 5.93e-21 95.5
Msa0564000 MtrunA17_Chr8g0336251 33.898 236 136 8 218 439 215 444 6.10e-21 95.1
Msa0564000 MtrunA17_Chr8g0357361 36.364 154 87 4 255 399 103 254 6.33e-21 92.4
Msa0564000 MtrunA17_Chr6g0466831 23.673 452 284 14 8 432 19 436 1.01e-20 94.7
Msa0564000 MtrunA17_Chr5g0427571 35.065 231 124 9 218 429 45 268 1.33e-20 92.0
Msa0564000 MtrunA17_Chr2g0319801 24.449 454 294 14 8 438 9 436 1.43e-20 94.0
Msa0564000 MtrunA17_Chr7g0231631 31.455 213 117 4 263 460 61 259 1.64e-20 91.3
Msa0564000 MtrunA17_Chr4g0040711 29.167 264 148 8 223 471 217 456 2.82e-20 93.2
Msa0564000 MtrunA17_Chr6g0466841 29.464 224 145 7 218 432 217 436 7.71e-20 92.0
Msa0564000 MtrunA17_Chr4g0039881 25.508 443 269 17 17 432 2 410 1.19e-19 91.3
Msa0564000 MtrunA17_Chr2g0319751 25.358 489 276 18 15 469 493 926 9.18e-19 89.7
Msa0564000 MtrunA17_Chr2g0319751 25.581 215 134 6 247 458 241 432 3.26e-14 75.5
Msa0564000 MtrunA17_Chr4g0040691 30.332 211 122 6 271 471 261 456 1.14e-18 88.2
Msa0564000 MtrunA17_Chr3g0092031 33.929 168 102 6 271 432 6 170 4.26e-18 82.8
Msa0564000 MtrunA17_Chr6g0464091 23.409 487 299 22 8 461 19 464 2.53e-17 84.3
Msa0564000 MtrunA17_Chr4g0029161 23.690 439 281 17 8 436 13 407 1.41e-14 75.5
Msa0564000 MtrunA17_Chr1g0207911 28.834 163 106 2 8 164 9 167 1.24e-13 70.9
Msa0564000 MtrunA17_Chr7g0243731 47.222 72 37 1 329 399 5 76 1.28e-13 66.2
Msa0564000 MtrunA17_Chr6g0454391 44.828 58 32 0 348 405 13 70 1.74e-12 64.3
Msa0564000 MtrunA17_Chr6g0453981 33.553 152 84 6 173 315 61 204 2.45e-12 66.6
Msa0564000 MtrunA17_Chr2g0321331 31.383 188 95 8 267 438 76 245 5.77e-12 66.2
Msa0564000 MtrunA17_Chr8g0377901 53.030 66 24 3 203 267 4 63 2.40e-11 59.7
Msa0564000 MtrunA17_Chr5g0442501 22.462 325 210 12 8 316 6 304 5.82e-11 63.5
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0564000 AT4G15550.1 45.877 473 219 12 9 459 15 472 4.16e-138 406
Msa0564000 AT1G05560.1 46.888 482 205 13 9 466 7 461 2.26e-134 396
Msa0564000 AT1G05560.2 46.888 482 205 13 9 466 57 511 2.91e-134 397
Msa0564000 AT4G14090.1 45.842 469 221 13 2 459 8 454 2.88e-128 380
Msa0564000 AT1G05530.1 45.148 474 214 12 9 461 7 455 5.54e-126 374
Msa0564000 AT2G43820.1 38.589 482 238 18 1 460 1 446 2.97e-92 287
Msa0564000 AT4G15500.1 36.518 471 265 13 8 461 10 463 4.03e-90 283
Msa0564000 AT1G05675.1 37.292 480 247 13 1 457 1 449 1.05e-89 281
Msa0564000 AT4G15480.1 35.789 475 267 12 8 460 20 478 2.99e-89 281
Msa0564000 AT2G31790.1 36.989 465 258 12 8 457 9 453 4.66e-89 279
Msa0564000 AT1G05680.1 36.875 480 249 13 1 457 1 449 5.63e-88 276
Msa0564000 AT1G24100.1 36.325 468 262 12 8 460 12 458 6.04e-88 276
Msa0564000 AT4G15490.1 34.719 481 282 13 2 464 4 470 6.26e-86 272
Msa0564000 AT2G43840.1 36.439 483 253 17 1 463 1 449 3.58e-85 269
Msa0564000 AT3G21560.1 34.958 472 276 12 8 460 13 472 8.25e-85 270
Msa0564000 AT2G43840.2 36.232 483 254 17 1 463 1 449 1.19e-84 268
Msa0564000 AT2G31750.1 37.288 472 253 17 8 461 9 455 1.64e-83 265
Msa0564000 AT2G31750.2 37.288 472 253 17 8 461 9 455 7.37e-83 264
Msa0564000 AT2G23250.1 34.632 462 264 15 10 460 1 435 9.53e-78 249
Msa0564000 AT2G23260.1 34.382 477 259 19 8 462 11 455 1.19e-76 247
Msa0564000 AT2G36970.1 30.316 475 294 12 8 460 11 470 1.15e-61 209
Msa0564000 AT2G28080.1 31.799 478 272 18 11 461 22 472 3.24e-60 205
Msa0564000 AT2G30140.1 31.646 474 267 15 8 460 14 451 4.55e-59 201
Msa0564000 AT2G30140.2 31.924 473 266 15 8 460 14 450 1.14e-58 200
Msa0564000 AT1G22360.1 29.592 490 289 14 8 462 11 479 1.71e-57 197
Msa0564000 AT1G22360.2 29.158 487 283 14 8 462 11 467 1.64e-55 192
Msa0564000 AT2G30150.1 30.802 474 262 16 13 460 3 436 1.48e-54 189
Msa0564000 AT2G30150.2 30.480 479 267 16 8 460 14 452 1.56e-54 189
Msa0564000 AT1G22400.1 28.261 506 288 16 8 468 14 489 2.19e-54 189
Msa0564000 AT1G22380.1 28.953 487 296 14 8 462 14 482 1.95e-53 187
Msa0564000 AT1G78270.1 30.064 469 271 18 9 442 15 461 1.86e-51 182
Msa0564000 AT5G38040.1 29.764 467 272 13 15 460 18 449 3.28e-51 180
Msa0564000 AT3G46670.1 29.916 478 265 14 8 457 10 445 5.45e-51 179
Msa0564000 AT1G22340.1 29.058 499 285 19 8 464 14 485 6.15e-51 180
Msa0564000 AT3G46660.1 31.027 477 263 17 8 457 15 452 1.02e-50 179
Msa0564000 AT5G59580.1 28.782 476 286 14 8 464 10 451 7.61e-49 174
Msa0564000 AT1G22370.2 29.158 487 290 15 8 462 14 477 2.33e-47 170
Msa0564000 AT5G38010.1 29.792 480 281 13 3 461 6 450 1.75e-46 167
Msa0564000 AT5G59590.1 28.421 475 282 15 8 460 11 449 2.12e-46 167
Msa0564000 AT3G02100.1 27.039 466 303 12 8 458 14 457 8.23e-44 160
Msa0564000 AT3G46650.1 28.419 468 266 16 8 456 11 428 1.40e-43 159
Msa0564000 AT2G36780.1 28.138 494 311 18 2 461 6 489 9.07e-43 158
Msa0564000 AT2G36770.1 28.427 496 307 18 2 461 6 489 1.37e-42 157
Msa0564000 AT2G36800.1 28.221 489 301 17 9 461 14 488 7.64e-42 155
Msa0564000 AT2G36760.1 27.273 484 311 15 9 461 16 489 1.27e-41 155
Msa0564000 AT3G16520.3 31.522 368 202 13 127 459 106 458 2.24e-41 154
Msa0564000 AT3G46680.1 27.254 477 282 12 8 458 10 447 5.55e-41 152
Msa0564000 AT2G15490.3 29.184 490 304 16 1 460 1 477 2.29e-40 151
Msa0564000 AT3G16520.1 31.921 354 191 13 127 445 106 444 2.87e-40 150
Msa0564000 AT3G16520.2 31.921 354 191 13 127 445 106 444 2.91e-40 150
Msa0564000 AT3G46700.1 26.694 487 277 15 8 463 10 447 3.02e-40 150
Msa0564000 AT3G46690.1 29.157 415 236 12 8 396 10 392 3.26e-40 150
Msa0564000 AT2G29710.1 27.066 484 297 14 8 461 6 463 3.56e-40 150
Msa0564000 AT3G55700.1 28.541 473 289 15 8 461 9 451 4.43e-40 150
Msa0564000 AT2G15480.1 29.132 484 298 16 8 460 11 480 6.37e-40 150
Msa0564000 AT2G15490.1 28.600 493 306 16 1 460 1 480 6.90e-40 150
Msa0564000 AT5G05870.1 35.686 255 140 6 219 460 211 454 8.14e-40 149
Msa0564000 AT3G46720.1 27.609 460 291 11 8 457 10 437 2.21e-39 148
Msa0564000 AT1G22370.1 34.084 311 154 10 180 462 20 307 2.99e-39 144
Msa0564000 AT4G34131.1 28.921 491 301 19 2 459 3 478 2.99e-39 148
Msa0564000 AT2G15480.2 28.398 493 300 16 8 460 11 490 1.90e-38 146
Msa0564000 AT2G36790.1 26.283 487 312 16 9 461 15 488 1.97e-38 146
Msa0564000 AT2G29730.1 25.738 474 316 12 8 461 6 463 6.69e-38 144
Msa0564000 AT2G36750.1 27.835 485 306 16 9 461 12 484 9.32e-38 144
Msa0564000 AT5G17050.1 24.625 467 317 12 8 461 13 457 1.28e-37 143
Msa0564000 AT2G29740.1 27.812 489 294 18 8 460 9 474 1.81e-37 143
Msa0564000 AT3G11340.1 27.813 471 290 16 7 461 9 445 2.85e-37 142
Msa0564000 AT5G05880.1 26.371 474 294 11 8 460 9 448 4.09e-37 142
Msa0564000 AT1G01420.1 36.015 261 134 8 219 455 210 461 4.84e-37 142
Msa0564000 AT1G01420.2 36.015 261 134 8 219 455 213 464 5.64e-37 142
Msa0564000 AT3G53160.1 26.190 504 305 16 2 461 3 483 6.63e-37 142
Msa0564000 AT4G34138.1 28.252 492 291 17 9 462 13 480 2.02e-36 140
Msa0564000 AT5G05860.1 27.564 468 298 13 8 462 10 449 2.66e-36 139
Msa0564000 AT5G05900.1 27.975 479 279 15 8 460 9 447 3.18e-36 139
Msa0564000 AT1G30530.1 25.745 470 305 15 6 461 12 451 4.36e-36 139
Msa0564000 AT4G36770.1 35.496 262 125 7 212 442 197 445 4.67e-36 139
Msa0564000 AT5G14860.1 27.505 509 291 21 1 466 3 476 5.38e-36 139
Msa0564000 AT4G01070.1 35.019 257 139 7 219 453 210 460 5.48e-36 139
Msa0564000 AT4G15280.1 25.051 491 310 13 8 461 5 474 9.46e-36 138
Msa0564000 AT1G73880.1 26.844 488 288 17 8 461 15 467 1.54e-35 138
Msa0564000 AT4G15280.2 25.051 491 310 13 8 461 37 506 1.68e-35 138
Msa0564000 AT4G34135.1 27.465 426 261 15 3 396 5 414 2.00e-35 137
Msa0564000 AT3G50740.1 33.213 277 155 7 219 467 209 483 2.35e-35 137
Msa0564000 AT5G26310.1 26.696 457 286 8 10 439 10 444 4.21e-35 137
Msa0564000 AT1G10400.1 26.681 476 303 17 8 459 8 461 5.88e-35 136
Msa0564000 AT2G16890.2 28.958 518 276 24 1 472 3 474 1.06e-34 135
Msa0564000 AT3G22250.1 26.395 466 283 13 8 442 9 445 1.11e-34 135
Msa0564000 AT1G07250.1 26.854 499 288 18 8 461 7 473 1.13e-34 135
Msa0564000 AT2G29750.1 27.959 490 293 18 8 461 9 474 1.22e-34 135
Msa0564000 AT3G55710.1 34.902 255 147 5 219 461 208 455 1.53e-34 135
Msa0564000 AT3G21800.1 31.086 267 155 5 219 460 213 475 2.92e-34 134
Msa0564000 AT1G07260.1 27.181 493 293 19 8 461 7 472 3.37e-34 134
Msa0564000 AT5G66690.1 28.009 457 280 12 10 439 10 444 3.56e-34 134
Msa0564000 AT1G01390.1 35.857 251 132 7 219 446 210 454 5.63e-34 134
Msa0564000 AT1G01390.2 35.857 251 132 7 219 446 227 471 7.21e-34 133
Msa0564000 AT3G21750.1 28.962 366 213 10 128 461 119 469 7.94e-34 133
Msa0564000 AT3G21790.1 24.949 493 311 14 8 460 5 478 2.66e-33 132
Msa0564000 AT5G17040.1 23.983 467 322 12 1 461 1 440 5.17e-33 130
Msa0564000 AT1G07240.1 32.184 261 154 7 219 461 221 476 1.04e-32 130
Msa0564000 AT4G15260.1 27.273 363 219 10 128 461 9 355 1.89e-32 127
Msa0564000 AT5G17030.1 24.459 462 326 11 6 461 12 456 6.51e-32 127
Msa0564000 AT5G17040.2 30.488 246 161 4 219 461 100 338 9.55e-32 124
Msa0564000 AT5G05890.1 26.694 487 280 13 8 460 9 452 1.24e-31 126
Msa0564000 AT5G37950.2 30.292 274 171 5 108 373 78 339 3.18e-31 123
Msa0564000 AT2G18570.1 31.034 261 161 4 211 453 200 459 5.42e-31 125
Msa0564000 AT3G21780.1 32.210 267 150 6 219 460 208 468 8.75e-31 124
Msa0564000 AT3G21760.1 24.652 503 302 16 8 460 5 480 3.03e-30 123
Msa0564000 AT2G18560.1 31.298 262 159 6 211 453 110 369 7.40e-30 120
Msa0564000 AT3G53150.1 26.382 398 236 15 107 461 127 510 1.62e-29 121
Msa0564000 AT5G03490.1 33.333 243 150 8 222 459 226 461 4.25e-29 119
Msa0564000 AT5G37950.1 30.000 280 170 7 108 373 78 345 5.33e-29 117
Msa0564000 AT2G16890.3 28.947 456 243 20 1 415 3 418 1.02e-28 118
Msa0564000 AT5G12890.1 32.955 264 155 6 220 465 227 486 1.73e-28 118
Msa0564000 AT2G26480.1 27.907 258 163 4 219 463 201 448 1.77e-28 117
Msa0564000 AT1G06000.1 24.644 491 268 15 8 462 11 435 8.26e-28 115
Msa0564000 AT1G51210.1 26.077 441 278 14 8 432 21 429 2.05e-27 114
Msa0564000 AT5G53990.1 24.681 470 297 15 15 463 14 447 2.51e-27 114
Msa0564000 AT5G54010.1 25.054 467 301 15 17 463 16 453 1.35e-26 112
Msa0564000 AT5G65550.1 25.397 441 283 16 15 432 17 434 4.91e-26 110
Msa0564000 AT4G27570.1 23.799 458 292 12 8 443 8 430 4.26e-25 107
Msa0564000 AT4G27560.1 24.229 454 281 11 8 436 8 423 5.98e-25 107
Msa0564000 AT3G29630.1 26.147 436 275 15 17 436 16 420 3.70e-24 105
Msa0564000 AT5G54060.1 25.630 476 288 17 10 451 14 457 5.86e-24 104
Msa0564000 AT1G64910.1 24.895 474 294 18 15 469 14 444 4.96e-23 101
Msa0564000 AT2G23210.1 30.634 284 161 13 8 280 11 269 5.20e-23 99.0
Msa0564000 AT1G50580.1 24.615 455 286 15 17 451 16 433 9.51e-23 100
Msa0564000 AT5G49690.1 24.947 473 301 16 8 461 11 448 9.75e-23 100
Msa0564000 AT1G64920.1 22.727 440 290 12 15 436 14 421 1.05e-20 94.7
Msa0564000 AT2G22930.1 22.603 438 289 14 15 436 14 417 1.57e-20 94.4
Msa0564000 AT3G29630.2 24.654 434 258 13 17 436 16 394 4.65e-20 92.8
Msa0564000 AT2G22590.1 23.922 464 289 19 8 438 16 448 9.50e-20 92.0
Msa0564000 AT4G09500.2 22.422 446 294 14 15 443 14 424 4.04e-18 87.0
Msa0564000 AT4G34135.2 25.148 338 214 12 3 316 5 327 1.69e-14 75.1
Msa0564000 AT4G09500.1 21.300 446 274 14 15 443 14 399 8.27e-13 70.5

Find 145 sgRNAs with CRISPR-Local

Find 330 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GGTTCTTTCACATTCTTCTT+TGG 0.160797 4_1:+64466425 Msa0564000:CDS
TGAAAATCTTGTTGAAAATA+TGG 0.193622 4_1:-64466006 None:intergenic
ACATAAACAACAGAAGATTT+TGG 0.246598 4_1:-64466228 None:intergenic
GGGTTTATGTGGCCTTGAGC+TGG 0.250910 4_1:-64465442 None:intergenic
GTTCTTTCACATTCTTCTTT+GGG 0.258852 4_1:+64466426 Msa0564000:CDS
ATTCAATGGTAGTTTGGTTT+TGG 0.261860 4_1:-64465897 None:intergenic
ACTTTGGAAAGTTTGGTATC+AGG 0.264513 4_1:+64466480 Msa0564000:CDS
CTGGTAATTCAATGGTAGTT+TGG 0.310098 4_1:-64465903 None:intergenic
ATTCTCTATTACTACTTTCA+TGG 0.315279 4_1:+64465847 Msa0564000:CDS
ATTGAAGATGTGTGGAAGAT+AGG 0.321918 4_1:+64466558 Msa0564000:CDS
TCTGTTGTTTATGTTTCTTT+TGG 0.336383 4_1:+64466237 Msa0564000:CDS
CGTAAACACCTTTGAAGCTT+TGG 0.337494 4_1:+64466062 Msa0564000:CDS
TCTACACGTTAATGCTTCCT+TGG 0.338389 4_1:+64465752 Msa0564000:CDS
TGGATGGATTGAGGAGGATT+AGG 0.363651 4_1:-64465543 None:intergenic
AAGGTGTTTACGAGTATTAT+CGG 0.367438 4_1:-64466051 None:intergenic
CTCTAGTGGCATTTCCTCAA+TGG 0.368993 4_1:+64466508 Msa0564000:CDS
GTGGATGAGGATGGAATTGT+AGG 0.375063 4_1:+64466600 Msa0564000:CDS
GAACTCGACTTTGGAAAGTT+TGG 0.378098 4_1:+64466473 Msa0564000:CDS
GAAAGGTTTGGATTCTTGTT+TGG 0.378817 4_1:-64465719 None:intergenic
GGATGAAATTAGAAAGTGTT+TGG 0.378934 4_1:+64466626 Msa0564000:CDS
CGCTTGGCAAATTGAAGGGC+TGG 0.382574 4_1:-64465463 None:intergenic
TGAGAAAGAATGCAATGAAA+TGG 0.388985 4_1:+64466685 Msa0564000:CDS
CGGTAGAGGTGGAGGGTGAT+AGG 0.403832 4_1:-64465517 None:intergenic
GTGATGGGGAGAGGAGAGAA+AGG 0.406369 4_1:+64466654 Msa0564000:CDS
TAAAGATGAGTTGGAAAAGA+AGG 0.407665 4_1:+64466371 Msa0564000:CDS
AAGGGGTTGGCTAGAGAGGC+AGG 0.409507 4_1:+64466708 Msa0564000:CDS
GTCCCGCAGAAAAGAATCTA+AGG 0.412896 4_1:+64466742 Msa0564000:CDS
GAGGTTGGAGATGGTGGTTA+TGG 0.413944 4_1:-64465563 None:intergenic
AGTCATTTGAAGGTTGCAAT+AGG 0.422571 4_1:-64466182 None:intergenic
CCACCACCACATGATCCTTC+TGG 0.424017 4_1:+64465411 Msa0564000:CDS
CATTCAATATAGTCATTTGA+AGG 0.424031 4_1:-64466192 None:intergenic
GTTGAAATTTAAAGATGAGT+TGG 0.425358 4_1:+64466362 Msa0564000:CDS
TTGCAATAGGTCACCGCTAA+AGG 0.428659 4_1:-64466169 None:intergenic
TTGAAGATGTGTGGAAGATA+GGG 0.430114 4_1:+64466559 Msa0564000:CDS
TTTGGCAGAGAGTATAAGAT+TGG 0.437133 4_1:-64465701 None:intergenic
CTTTGGAAAGTTTGGTATCA+GGG 0.438279 4_1:+64466481 Msa0564000:CDS
TTGTGGTTGGAACTCGACTT+TGG 0.444492 4_1:+64466464 Msa0564000:CDS
GTCGTCATGGCCATCGGAGA+AGG 0.445692 4_1:-64465596 None:intergenic
TATGGAGAGGTTGGAGATGG+TGG 0.448776 4_1:-64465569 None:intergenic
CAAGTGCGTTGTTGAATTGT+GGG 0.449033 4_1:+64466301 Msa0564000:CDS
CTACACGTTAATGCTTCCTT+GGG 0.449608 4_1:+64465753 Msa0564000:CDS
GGTTTATGTGGCCTTGAGCT+GGG 0.453046 4_1:-64465441 None:intergenic
TTAGGCGACGGTAGAGGTGG+AGG 0.465565 4_1:-64465525 None:intergenic
CTCTGGCTCCAAAGCTTCAA+AGG 0.465787 4_1:-64466070 None:intergenic
TGCCAAGCGACTCATATCAA+TGG 0.465795 4_1:+64465477 Msa0564000:CDS
AAAGATGAGTTGGAAAAGAA+GGG 0.469951 4_1:+64466372 Msa0564000:CDS
ATTGAAGGGCTGGGTTTATG+TGG 0.477702 4_1:-64465453 None:intergenic
GAGTAAGCAAGTGAAAGGTT+TGG 0.478164 4_1:-64465731 None:intergenic
CTTCAAATGACTATATTGAA+TGG 0.480500 4_1:+64466193 Msa0564000:CDS
TTGGAGATGGTGGTTATGGA+TGG 0.481152 4_1:-64465559 None:intergenic
GAAGGATCATGTGGTGGTGG+TGG 0.487461 4_1:-64465408 None:intergenic
TCGTCATGGCCATCGGAGAA+GGG 0.490579 4_1:-64465595 None:intergenic
GCTAGAGAGGCAGGGAAGGA+AGG 0.496328 4_1:+64466717 Msa0564000:CDS
TCCGGTAGTACTTCCTTTAG+CGG 0.499324 4_1:+64466156 Msa0564000:CDS
AAAGTGTTTGGAAGTGGTGA+TGG 0.499781 4_1:+64466638 Msa0564000:CDS
TTGGAAGTGGTGATGGGGAG+AGG 0.502226 4_1:+64466645 Msa0564000:CDS
GATAGTGTGAAGGGCAATCC+TGG 0.502974 4_1:-64465922 None:intergenic
GGTATCAGGGGTTCCTCTAG+TGG 0.504820 4_1:+64466494 Msa0564000:CDS
TCAACGGCTCTAAGTGCCTC+TGG 0.506658 4_1:-64466087 None:intergenic
GCCAAGCGACTCATATCAAT+GGG 0.506703 4_1:+64465478 Msa0564000:CDS
GTTGGCTAGAGAGGCAGGGA+AGG 0.508792 4_1:+64466713 Msa0564000:CDS
TGAGTCGCTTGGCAAATTGA+AGG 0.509396 4_1:-64465468 None:intergenic
GCAAGTGCGTTGTTGAATTG+TGG 0.515077 4_1:+64466300 Msa0564000:CDS
GCTTGGCAAATTGAAGGGCT+GGG 0.519390 4_1:-64465462 None:intergenic
GGTGAGAGTTGATGATAAAG+TGG 0.520496 4_1:+64466581 Msa0564000:CDS
CAAACTACCATTGAATTACC+AGG 0.521103 4_1:+64465904 Msa0564000:CDS
TGTTGAACTGTGAAGTGTAT+AGG 0.522665 4_1:-64465657 None:intergenic
GGTGATGAAGTCGGAGCCAC+GGG 0.524438 4_1:-64465680 None:intergenic
GTACTACCGGAGGGAATCAA+TGG 0.525946 4_1:-64466144 None:intergenic
ATGGAAGGGGTTGGCTAGAG+AGG 0.536943 4_1:+64466704 Msa0564000:CDS
GGATTAGGCGACGGTAGAGG+TGG 0.538007 4_1:-64465528 None:intergenic
AGAATATCAAACACTGTGGC+GGG 0.545004 4_1:-64465829 None:intergenic
ATCGGACCATTGATTCCCTC+CGG 0.545735 4_1:+64466138 Msa0564000:CDS
AAGTGTTTGGAAGTGGTGAT+GGG 0.545845 4_1:+64466639 Msa0564000:CDS
GTTTACGAGTATTATCGGAT+TGG 0.548691 4_1:-64466046 None:intergenic
GGTTATGGAGAGGTTGGAGA+TGG 0.552642 4_1:-64465572 None:intergenic
GGGCAATCCTGGTAATTCAA+TGG 0.555277 4_1:-64465911 None:intergenic
CTTTGAAGCTTTGGAGCCAG+AGG 0.557170 4_1:+64466071 Msa0564000:CDS
AGTTGATGATAAAGTGGATG+AGG 0.557996 4_1:+64466587 Msa0564000:CDS
CGTCATGGCCATCGGAGAAG+GGG 0.558285 4_1:-64465594 None:intergenic
ACCGCTAAAGGAAGTACTAC+CGG 0.558600 4_1:-64466157 None:intergenic
TGGTGATGAAGTCGGAGCCA+CGG 0.561307 4_1:-64465681 None:intergenic
ACCTCCGCTCAGCTAAACTC+TGG 0.561490 4_1:+64465800 Msa0564000:CDS
ACCCATTGATATGAGTCGCT+TGG 0.561897 4_1:-64465479 None:intergenic
ATGAGGATGGAATTGTAGGA+GGG 0.563817 4_1:+64466604 Msa0564000:CDS
TGGTGGTTATGGATGGATTG+AGG 0.564410 4_1:-64465552 None:intergenic
CGAGCTACTTGTGGAGCCCA+AGG 0.565805 4_1:-64465769 None:intergenic
GTCACGTGGCGATAGTGTGA+AGG 0.567114 4_1:-64465932 None:intergenic
AAAGAATGCAATGAAATGGA+AGG 0.567197 4_1:+64466689 Msa0564000:CDS
CCAGAAGGATCATGTGGTGG+TGG 0.569324 4_1:-64465411 None:intergenic
GGAGGATTAGGCGACGGTAG+AGG 0.575095 4_1:-64465531 None:intergenic
AATTAGAAAGTGTTTGGAAG+TGG 0.577533 4_1:+64466632 Msa0564000:CDS
TTGAATCCACGAGCTACTTG+TGG 0.578084 4_1:-64465778 None:intergenic
TGCAATGAAATGGAAGGGGT+TGG 0.578497 4_1:+64466695 Msa0564000:CDS
AAGAATGCAATGAAATGGAA+GGG 0.580916 4_1:+64466690 Msa0564000:CDS
GGAGGGAATCAATGGTCCGA+TGG 0.581754 4_1:-64466136 None:intergenic
ATCAGCGTCGGTCTTTGTGA+TGG 0.582570 4_1:-64465629 None:intergenic
AAGATGAGTTGGAAAAGAAG+GGG 0.583738 4_1:+64466373 Msa0564000:CDS
GAAACCGTCGTCATGGCCAT+CGG 0.585905 4_1:-64465602 None:intergenic
AGAGAGGCAGGGAAGGAAGG+TGG 0.586569 4_1:+64466720 Msa0564000:CDS
GATGAGGATGGAATTGTAGG+AGG 0.587770 4_1:+64466603 Msa0564000:CDS
CTGGTAACGTACCCAGCTCA+AGG 0.588788 4_1:+64465430 Msa0564000:CDS
GTGTAGAGTAAGCAAGTGAA+AGG 0.589149 4_1:-64465736 None:intergenic
GAGAATATCAAACACTGTGG+CGG 0.589449 4_1:-64465830 None:intergenic
TTCTCCGATGGCCATGACGA+CGG 0.590441 4_1:+64465598 Msa0564000:CDS
TGAAGATGTGTGGAAGATAG+GGG 0.590800 4_1:+64466560 Msa0564000:CDS
GAGGTTATGATGAGTATCAA+CGG 0.591472 4_1:-64466103 None:intergenic
AGTGAAGTGGTGTTCTCAAG+TGG 0.591682 4_1:+64466401 Msa0564000:CDS
TATAAGATTGGTGATGAAGT+CGG 0.591974 4_1:-64465689 None:intergenic
GAGGGAATCAATGGTCCGAT+GGG 0.595436 4_1:-64466135 None:intergenic
AAGGATCATGTGGTGGTGGT+GGG 0.597152 4_1:-64465407 None:intergenic
ATTATTGGAGAATGCATGCA+TGG 0.597677 4_1:+64466782 Msa0564000:CDS
GAGTCGCTTGGCAAATTGAA+GGG 0.597812 4_1:-64465467 None:intergenic
TTTGGAAAGTTTGGTATCAG+GGG 0.598241 4_1:+64466482 Msa0564000:CDS
AGAAGGGGAAGATAGTGAAG+TGG 0.600131 4_1:+64466388 Msa0564000:CDS
TGGGCTCCACAAGTAGCTCG+TGG 0.600705 4_1:+64465772 Msa0564000:CDS
TGGCGATGAAACCGTCGTCA+TGG 0.601182 4_1:-64465609 None:intergenic
AAAACAAAAGACAAGTCACC+AGG 0.608502 4_1:-64465982 None:intergenic
AGAATGCAATGAAATGGAAG+GGG 0.608881 4_1:+64466691 Msa0564000:CDS
CAAAACTAATTGAAGATGTG+TGG 0.610455 4_1:+64466550 Msa0564000:CDS
AGGGGTTGGCTAGAGAGGCA+GGG 0.613392 4_1:+64466709 Msa0564000:CDS
GGGGAGAGGAGAGAAAGGAG+AGG 0.615489 4_1:+64466659 Msa0564000:CDS
GATGATAAAGTGGATGAGGA+TGG 0.616208 4_1:+64466591 Msa0564000:CDS
TCACGTGGCGATAGTGTGAA+GGG 0.616536 4_1:-64465931 None:intergenic
TGAGGATGGAATTGTAGGAG+GGG 0.617822 4_1:+64466605 Msa0564000:CDS
TCCAGAGTTTAGCTGAGCGG+AGG 0.617889 4_1:-64465801 None:intergenic
TAGGCGACGGTAGAGGTGGA+GGG 0.621593 4_1:-64465524 None:intergenic
AACCTCAAAATGATTCCCAT+CGG 0.625304 4_1:+64466120 Msa0564000:CDS
TGAACTGTGAAGTGTATAGG+TGG 0.639900 4_1:-64465654 None:intergenic
AGTGTTTGGAAGTGGTGATG+GGG 0.640210 4_1:+64466640 Msa0564000:CDS
GAGCTGGGTACGTTACCAGA+AGG 0.642832 4_1:-64465426 None:intergenic
GATTGAGGAGGATTAGGCGA+CGG 0.647039 4_1:-64465537 None:intergenic
GAAGTGGTGTTCTCAAGTGG+AGG 0.648671 4_1:+64466404 Msa0564000:CDS
GGAGAATGCATGCATGGACA+CGG 0.651287 4_1:+64466788 Msa0564000:CDS
GTCATGGCCATCGGAGAAGG+GGG 0.653155 4_1:-64465593 None:intergenic
CATTGAGGAAATGCCACTAG+AGG 0.659387 4_1:-64466507 None:intergenic
TGGTTATGGATGGATTGAGG+AGG 0.667299 4_1:-64465549 None:intergenic
ACTTCACAGTTCAACACCCG+TGG 0.674976 4_1:+64465664 Msa0564000:CDS
GTATAGGTGGAAATCAGCGT+CGG 0.675940 4_1:-64465641 None:intergenic
CAATCCAGAGTTTAGCTGAG+CGG 0.681614 4_1:-64465804 None:intergenic
CTAAAGGAAGTACTACCGGA+GGG 0.685931 4_1:-64466153 None:intergenic
ACGTTACCAGAAGGATCATG+TGG 0.687670 4_1:-64465417 None:intergenic
TTACCAGAAGGATCATGTGG+TGG 0.709421 4_1:-64465414 None:intergenic
GCTAAAGGAAGTACTACCGG+AGG 0.721504 4_1:-64466154 None:intergenic
ATAGAGAATATCAAACACTG+TGG 0.766397 4_1:-64465833 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TTTGAAGTAAATAAAAAAGA+AGG - chr4_1:64465961-64465980 None:intergenic 15.0%
!!! ATTTTTGGATGATATATTAT+TGG + chr4_1:64466767-64466786 Msa0564000:CDS 15.0%
!!! TTTGAAGTAAATAAAAAAGA+AGG - chr4_1:64465961-64465980 None:intergenic 15.0%
!!! ATTTTTGGATGATATATTAT+TGG + chr4_1:64466767-64466786 Msa0564000:CDS 15.0%
!!! TTTTTATTTACTTCAAATCC+TGG + chr4_1:64465964-64465983 Msa0564000:CDS 20.0%
!! TGAAAATCTTGTTGAAAATA+TGG - chr4_1:64466009-64466028 None:intergenic 20.0%
!!! AAAGAATCTAAGGAAATTTT+TGG + chr4_1:64466752-64466771 Msa0564000:CDS 20.0%
!!! TTTTTATTTACTTCAAATCC+TGG + chr4_1:64465964-64465983 Msa0564000:CDS 20.0%
!! TGAAAATCTTGTTGAAAATA+TGG - chr4_1:64466009-64466028 None:intergenic 20.0%
!!! AAAGAATCTAAGGAAATTTT+TGG + chr4_1:64466752-64466771 Msa0564000:CDS 20.0%
! ATTCTCTATTACTACTTTCA+TGG + chr4_1:64465847-64465866 Msa0564000:CDS 25.0%
!!! TTTGGTTTTGGTTATTGATA+TGG - chr4_1:64465882-64465901 None:intergenic 25.0%
! CATTCAATATAGTCATTTGA+AGG - chr4_1:64466195-64466214 None:intergenic 25.0%
! CTTCAAATGACTATATTGAA+TGG + chr4_1:64466193-64466212 Msa0564000:CDS 25.0%
!! ACATAAACAACAGAAGATTT+TGG - chr4_1:64466231-64466250 None:intergenic 25.0%
!!! TCTGTTGTTTATGTTTCTTT+TGG + chr4_1:64466237-64466256 Msa0564000:CDS 25.0%
! GTTGAAATTTAAAGATGAGT+TGG + chr4_1:64466362-64466381 Msa0564000:CDS 25.0%
! ATTCTCTATTACTACTTTCA+TGG + chr4_1:64465847-64465866 Msa0564000:CDS 25.0%
!!! TTTGGTTTTGGTTATTGATA+TGG - chr4_1:64465882-64465901 None:intergenic 25.0%
! CATTCAATATAGTCATTTGA+AGG - chr4_1:64466195-64466214 None:intergenic 25.0%
! CTTCAAATGACTATATTGAA+TGG + chr4_1:64466193-64466212 Msa0564000:CDS 25.0%
!! ACATAAACAACAGAAGATTT+TGG - chr4_1:64466231-64466250 None:intergenic 25.0%
!!! TCTGTTGTTTATGTTTCTTT+TGG + chr4_1:64466237-64466256 Msa0564000:CDS 25.0%
! GTTGAAATTTAAAGATGAGT+TGG + chr4_1:64466362-64466381 Msa0564000:CDS 25.0%
!! TATAAGATTGGTGATGAAGT+CGG - chr4_1:64465692-64465711 None:intergenic 30.0%
ATAGAGAATATCAAACACTG+TGG - chr4_1:64465836-64465855 None:intergenic 30.0%
!! ATTCAATGGTAGTTTGGTTT+TGG - chr4_1:64465900-64465919 None:intergenic 30.0%
! AAGGTGTTTACGAGTATTAT+CGG - chr4_1:64466054-64466073 None:intergenic 30.0%
! TAAAGATGAGTTGGAAAAGA+AGG + chr4_1:64466371-64466390 Msa0564000:CDS 30.0%
! AAAGATGAGTTGGAAAAGAA+GGG + chr4_1:64466372-64466391 Msa0564000:CDS 30.0%
GTTCTTTCACATTCTTCTTT+GGG + chr4_1:64466426-64466445 Msa0564000:CDS 30.0%
CAAAACTAATTGAAGATGTG+TGG + chr4_1:64466550-64466569 Msa0564000:CDS 30.0%
!! GGATGAAATTAGAAAGTGTT+TGG + chr4_1:64466626-64466645 Msa0564000:CDS 30.0%
!! AATTAGAAAGTGTTTGGAAG+TGG + chr4_1:64466632-64466651 Msa0564000:CDS 30.0%
TGAGAAAGAATGCAATGAAA+TGG + chr4_1:64466685-64466704 Msa0564000:CDS 30.0%
AAAGAATGCAATGAAATGGA+AGG + chr4_1:64466689-64466708 Msa0564000:CDS 30.0%
AAGAATGCAATGAAATGGAA+GGG + chr4_1:64466690-64466709 Msa0564000:CDS 30.0%
! TTTCCTTAGATTCTTTTCTG+CGG - chr4_1:64466748-64466767 None:intergenic 30.0%
!! TATAAGATTGGTGATGAAGT+CGG - chr4_1:64465692-64465711 None:intergenic 30.0%
ATAGAGAATATCAAACACTG+TGG - chr4_1:64465836-64465855 None:intergenic 30.0%
!! ATTCAATGGTAGTTTGGTTT+TGG - chr4_1:64465900-64465919 None:intergenic 30.0%
! AAGGTGTTTACGAGTATTAT+CGG - chr4_1:64466054-64466073 None:intergenic 30.0%
! TAAAGATGAGTTGGAAAAGA+AGG + chr4_1:64466371-64466390 Msa0564000:CDS 30.0%
! AAAGATGAGTTGGAAAAGAA+GGG + chr4_1:64466372-64466391 Msa0564000:CDS 30.0%
GTTCTTTCACATTCTTCTTT+GGG + chr4_1:64466426-64466445 Msa0564000:CDS 30.0%
CAAAACTAATTGAAGATGTG+TGG + chr4_1:64466550-64466569 Msa0564000:CDS 30.0%
!! GGATGAAATTAGAAAGTGTT+TGG + chr4_1:64466626-64466645 Msa0564000:CDS 30.0%
!! AATTAGAAAGTGTTTGGAAG+TGG + chr4_1:64466632-64466651 Msa0564000:CDS 30.0%
TGAGAAAGAATGCAATGAAA+TGG + chr4_1:64466685-64466704 Msa0564000:CDS 30.0%
AAAGAATGCAATGAAATGGA+AGG + chr4_1:64466689-64466708 Msa0564000:CDS 30.0%
AAGAATGCAATGAAATGGAA+GGG + chr4_1:64466690-64466709 Msa0564000:CDS 30.0%
! TTTCCTTAGATTCTTTTCTG+CGG - chr4_1:64466748-64466767 None:intergenic 30.0%
TGTTGAACTGTGAAGTGTAT+AGG - chr4_1:64465660-64465679 None:intergenic 35.0%
! TTTGGCAGAGAGTATAAGAT+TGG - chr4_1:64465704-64465723 None:intergenic 35.0%
GAAAGGTTTGGATTCTTGTT+TGG - chr4_1:64465722-64465741 None:intergenic 35.0%
!!! TGGTAGTTTGGTTTTGGTTT+TGG - chr4_1:64465894-64465913 None:intergenic 35.0%
CTGGTAATTCAATGGTAGTT+TGG - chr4_1:64465906-64465925 None:intergenic 35.0%
CAAACTACCATTGAATTACC+AGG + chr4_1:64465904-64465923 Msa0564000:CDS 35.0%
! AAAAAAGAAGGTATGTCACG+TGG - chr4_1:64465949-64465968 None:intergenic 35.0%
AAAACAAAAGACAAGTCACC+AGG - chr4_1:64465985-64466004 None:intergenic 35.0%
GTTTACGAGTATTATCGGAT+TGG - chr4_1:64466049-64466068 None:intergenic 35.0%
GAGGTTATGATGAGTATCAA+CGG - chr4_1:64466106-64466125 None:intergenic 35.0%
AACCTCAAAATGATTCCCAT+CGG + chr4_1:64466120-64466139 Msa0564000:CDS 35.0%
AGTCATTTGAAGGTTGCAAT+AGG - chr4_1:64466185-64466204 None:intergenic 35.0%
! ATTGTGGGTTTTCATTCTTG+TGG + chr4_1:64466316-64466335 Msa0564000:CDS 35.0%
! TTGTGGGTTTTCATTCTTGT+GGG + chr4_1:64466317-64466336 Msa0564000:CDS 35.0%
! AAGATGAGTTGGAAAAGAAG+GGG + chr4_1:64466373-64466392 Msa0564000:CDS 35.0%
GGTTCTTTCACATTCTTCTT+TGG + chr4_1:64466425-64466444 Msa0564000:CDS 35.0%
!!! GGTTGTTTTTTGACTCATTG+TGG + chr4_1:64466447-64466466 Msa0564000:CDS 35.0%
!!! GTTTTTTGACTCATTGTGGT+TGG + chr4_1:64466451-64466470 Msa0564000:CDS 35.0%
! ACTTTGGAAAGTTTGGTATC+AGG + chr4_1:64466480-64466499 Msa0564000:CDS 35.0%
! CTTTGGAAAGTTTGGTATCA+GGG + chr4_1:64466481-64466500 Msa0564000:CDS 35.0%
TTTGGAAAGTTTGGTATCAG+GGG + chr4_1:64466482-64466501 Msa0564000:CDS 35.0%
ATTGAAGATGTGTGGAAGAT+AGG + chr4_1:64466558-64466577 Msa0564000:CDS 35.0%
TTGAAGATGTGTGGAAGATA+GGG + chr4_1:64466559-64466578 Msa0564000:CDS 35.0%
!! AGTTGATGATAAAGTGGATG+AGG + chr4_1:64466587-64466606 Msa0564000:CDS 35.0%
AGAATGCAATGAAATGGAAG+GGG + chr4_1:64466691-64466710 Msa0564000:CDS 35.0%
! TTCCTTAGATTCTTTTCTGC+GGG - chr4_1:64466747-64466766 None:intergenic 35.0%
ATTATTGGAGAATGCATGCA+TGG + chr4_1:64466782-64466801 Msa0564000:CDS 35.0%
TGTTGAACTGTGAAGTGTAT+AGG - chr4_1:64465660-64465679 None:intergenic 35.0%
! TTTGGCAGAGAGTATAAGAT+TGG - chr4_1:64465704-64465723 None:intergenic 35.0%
GAAAGGTTTGGATTCTTGTT+TGG - chr4_1:64465722-64465741 None:intergenic 35.0%
!!! TGGTAGTTTGGTTTTGGTTT+TGG - chr4_1:64465894-64465913 None:intergenic 35.0%
CTGGTAATTCAATGGTAGTT+TGG - chr4_1:64465906-64465925 None:intergenic 35.0%
CAAACTACCATTGAATTACC+AGG + chr4_1:64465904-64465923 Msa0564000:CDS 35.0%
! AAAAAAGAAGGTATGTCACG+TGG - chr4_1:64465949-64465968 None:intergenic 35.0%
AAAACAAAAGACAAGTCACC+AGG - chr4_1:64465985-64466004 None:intergenic 35.0%
GTTTACGAGTATTATCGGAT+TGG - chr4_1:64466049-64466068 None:intergenic 35.0%
GAGGTTATGATGAGTATCAA+CGG - chr4_1:64466106-64466125 None:intergenic 35.0%
AACCTCAAAATGATTCCCAT+CGG + chr4_1:64466120-64466139 Msa0564000:CDS 35.0%
AGTCATTTGAAGGTTGCAAT+AGG - chr4_1:64466185-64466204 None:intergenic 35.0%
! ATTGTGGGTTTTCATTCTTG+TGG + chr4_1:64466316-64466335 Msa0564000:CDS 35.0%
! TTGTGGGTTTTCATTCTTGT+GGG + chr4_1:64466317-64466336 Msa0564000:CDS 35.0%
! AAGATGAGTTGGAAAAGAAG+GGG + chr4_1:64466373-64466392 Msa0564000:CDS 35.0%
GGTTCTTTCACATTCTTCTT+TGG + chr4_1:64466425-64466444 Msa0564000:CDS 35.0%
!!! GGTTGTTTTTTGACTCATTG+TGG + chr4_1:64466447-64466466 Msa0564000:CDS 35.0%
!!! GTTTTTTGACTCATTGTGGT+TGG + chr4_1:64466451-64466470 Msa0564000:CDS 35.0%
! ACTTTGGAAAGTTTGGTATC+AGG + chr4_1:64466480-64466499 Msa0564000:CDS 35.0%
! CTTTGGAAAGTTTGGTATCA+GGG + chr4_1:64466481-64466500 Msa0564000:CDS 35.0%
TTTGGAAAGTTTGGTATCAG+GGG + chr4_1:64466482-64466501 Msa0564000:CDS 35.0%
ATTGAAGATGTGTGGAAGAT+AGG + chr4_1:64466558-64466577 Msa0564000:CDS 35.0%
TTGAAGATGTGTGGAAGATA+GGG + chr4_1:64466559-64466578 Msa0564000:CDS 35.0%
!! AGTTGATGATAAAGTGGATG+AGG + chr4_1:64466587-64466606 Msa0564000:CDS 35.0%
AGAATGCAATGAAATGGAAG+GGG + chr4_1:64466691-64466710 Msa0564000:CDS 35.0%
! TTCCTTAGATTCTTTTCTGC+GGG - chr4_1:64466747-64466766 None:intergenic 35.0%
ATTATTGGAGAATGCATGCA+TGG + chr4_1:64466782-64466801 Msa0564000:CDS 35.0%
TGAACTGTGAAGTGTATAGG+TGG - chr4_1:64465657-64465676 None:intergenic 40.0%
GAGTAAGCAAGTGAAAGGTT+TGG - chr4_1:64465734-64465753 None:intergenic 40.0%
GTGTAGAGTAAGCAAGTGAA+AGG - chr4_1:64465739-64465758 None:intergenic 40.0%
TCTACACGTTAATGCTTCCT+TGG + chr4_1:64465752-64465771 Msa0564000:CDS 40.0%
CTACACGTTAATGCTTCCTT+GGG + chr4_1:64465753-64465772 Msa0564000:CDS 40.0%
AGAATATCAAACACTGTGGC+GGG - chr4_1:64465832-64465851 None:intergenic 40.0%
GAGAATATCAAACACTGTGG+CGG - chr4_1:64465833-64465852 None:intergenic 40.0%
!! CGTAAACACCTTTGAAGCTT+TGG + chr4_1:64466062-64466081 Msa0564000:CDS 40.0%
CAAGTGCGTTGTTGAATTGT+GGG + chr4_1:64466301-64466320 Msa0564000:CDS 40.0%
GGTCATGAGAGAAAAAGAAG+AGG + chr4_1:64466338-64466357 Msa0564000:CDS 40.0%
! GAACTCGACTTTGGAAAGTT+TGG + chr4_1:64466473-64466492 Msa0564000:CDS 40.0%
! GTCTTTTGATCAGTCCATTG+AGG - chr4_1:64466525-64466544 None:intergenic 40.0%
TGAAGATGTGTGGAAGATAG+GGG + chr4_1:64466560-64466579 Msa0564000:CDS 40.0%
!! GGTGAGAGTTGATGATAAAG+TGG + chr4_1:64466581-64466600 Msa0564000:CDS 40.0%
GATGATAAAGTGGATGAGGA+TGG + chr4_1:64466591-64466610 Msa0564000:CDS 40.0%
ATGAGGATGGAATTGTAGGA+GGG + chr4_1:64466604-64466623 Msa0564000:CDS 40.0%
! AAAGTGTTTGGAAGTGGTGA+TGG + chr4_1:64466638-64466657 Msa0564000:CDS 40.0%
AAGTGTTTGGAAGTGGTGAT+GGG + chr4_1:64466639-64466658 Msa0564000:CDS 40.0%
TGAACTGTGAAGTGTATAGG+TGG - chr4_1:64465657-64465676 None:intergenic 40.0%
GAGTAAGCAAGTGAAAGGTT+TGG - chr4_1:64465734-64465753 None:intergenic 40.0%
GTGTAGAGTAAGCAAGTGAA+AGG - chr4_1:64465739-64465758 None:intergenic 40.0%
TCTACACGTTAATGCTTCCT+TGG + chr4_1:64465752-64465771 Msa0564000:CDS 40.0%
CTACACGTTAATGCTTCCTT+GGG + chr4_1:64465753-64465772 Msa0564000:CDS 40.0%
AGAATATCAAACACTGTGGC+GGG - chr4_1:64465832-64465851 None:intergenic 40.0%
GAGAATATCAAACACTGTGG+CGG - chr4_1:64465833-64465852 None:intergenic 40.0%
!! CGTAAACACCTTTGAAGCTT+TGG + chr4_1:64466062-64466081 Msa0564000:CDS 40.0%
CAAGTGCGTTGTTGAATTGT+GGG + chr4_1:64466301-64466320 Msa0564000:CDS 40.0%
GGTCATGAGAGAAAAAGAAG+AGG + chr4_1:64466338-64466357 Msa0564000:CDS 40.0%
! GAACTCGACTTTGGAAAGTT+TGG + chr4_1:64466473-64466492 Msa0564000:CDS 40.0%
! GTCTTTTGATCAGTCCATTG+AGG - chr4_1:64466525-64466544 None:intergenic 40.0%
TGAAGATGTGTGGAAGATAG+GGG + chr4_1:64466560-64466579 Msa0564000:CDS 40.0%
!! GGTGAGAGTTGATGATAAAG+TGG + chr4_1:64466581-64466600 Msa0564000:CDS 40.0%
GATGATAAAGTGGATGAGGA+TGG + chr4_1:64466591-64466610 Msa0564000:CDS 40.0%
ATGAGGATGGAATTGTAGGA+GGG + chr4_1:64466604-64466623 Msa0564000:CDS 40.0%
! AAAGTGTTTGGAAGTGGTGA+TGG + chr4_1:64466638-64466657 Msa0564000:CDS 40.0%
AAGTGTTTGGAAGTGGTGAT+GGG + chr4_1:64466639-64466658 Msa0564000:CDS 40.0%
TTACCAGAAGGATCATGTGG+TGG - chr4_1:64465417-64465436 None:intergenic 45.0%
ACGTTACCAGAAGGATCATG+TGG - chr4_1:64465420-64465439 None:intergenic 45.0%
ATTGAAGGGCTGGGTTTATG+TGG - chr4_1:64465456-64465475 None:intergenic 45.0%
GAGTCGCTTGGCAAATTGAA+GGG - chr4_1:64465470-64465489 None:intergenic 45.0%
TGAGTCGCTTGGCAAATTGA+AGG - chr4_1:64465471-64465490 None:intergenic 45.0%
TGCCAAGCGACTCATATCAA+TGG + chr4_1:64465477-64465496 Msa0564000:CDS 45.0%
GCCAAGCGACTCATATCAAT+GGG + chr4_1:64465478-64465497 Msa0564000:CDS 45.0%
ACCCATTGATATGAGTCGCT+TGG - chr4_1:64465482-64465501 None:intergenic 45.0%
!! TGGATGGATTGAGGAGGATT+AGG - chr4_1:64465546-64465565 None:intergenic 45.0%
!! TGGTTATGGATGGATTGAGG+AGG - chr4_1:64465552-64465571 None:intergenic 45.0%
!! TGGTGGTTATGGATGGATTG+AGG - chr4_1:64465555-64465574 None:intergenic 45.0%
! TTGGAGATGGTGGTTATGGA+TGG - chr4_1:64465562-64465581 None:intergenic 45.0%
GTATAGGTGGAAATCAGCGT+CGG - chr4_1:64465644-64465663 None:intergenic 45.0%
TTGAATCCACGAGCTACTTG+TGG - chr4_1:64465781-64465800 None:intergenic 45.0%
CAATCCAGAGTTTAGCTGAG+CGG - chr4_1:64465807-64465826 None:intergenic 45.0%
GGGCAATCCTGGTAATTCAA+TGG - chr4_1:64465914-64465933 None:intergenic 45.0%
! GTCCGATGGGAATCATTTTG+AGG - chr4_1:64466125-64466144 None:intergenic 45.0%
!! CTAAAGGAAGTACTACCGGA+GGG - chr4_1:64466156-64466175 None:intergenic 45.0%
TCCGGTAGTACTTCCTTTAG+CGG + chr4_1:64466156-64466175 Msa0564000:CDS 45.0%
!! ACCGCTAAAGGAAGTACTAC+CGG - chr4_1:64466160-64466179 None:intergenic 45.0%
TTGCAATAGGTCACCGCTAA+AGG - chr4_1:64466172-64466191 None:intergenic 45.0%
GCAAGTGCGTTGTTGAATTG+TGG + chr4_1:64466300-64466319 Msa0564000:CDS 45.0%
AGAAGGGGAAGATAGTGAAG+TGG + chr4_1:64466388-64466407 Msa0564000:CDS 45.0%
AGTGAAGTGGTGTTCTCAAG+TGG + chr4_1:64466401-64466420 Msa0564000:CDS 45.0%
TTGTGGTTGGAACTCGACTT+TGG + chr4_1:64466464-64466483 Msa0564000:CDS 45.0%
CATTGAGGAAATGCCACTAG+AGG - chr4_1:64466510-64466529 None:intergenic 45.0%
CTCTAGTGGCATTTCCTCAA+TGG + chr4_1:64466508-64466527 Msa0564000:CDS 45.0%
GTGGATGAGGATGGAATTGT+AGG + chr4_1:64466600-64466619 Msa0564000:CDS 45.0%
GATGAGGATGGAATTGTAGG+AGG + chr4_1:64466603-64466622 Msa0564000:CDS 45.0%
TGAGGATGGAATTGTAGGAG+GGG + chr4_1:64466605-64466624 Msa0564000:CDS 45.0%
! AGTGTTTGGAAGTGGTGATG+GGG + chr4_1:64466640-64466659 Msa0564000:CDS 45.0%
TGCAATGAAATGGAAGGGGT+TGG + chr4_1:64466695-64466714 Msa0564000:CDS 45.0%
GTCCCGCAGAAAAGAATCTA+AGG + chr4_1:64466742-64466761 Msa0564000:CDS 45.0%
TTACCAGAAGGATCATGTGG+TGG - chr4_1:64465417-64465436 None:intergenic 45.0%
ACGTTACCAGAAGGATCATG+TGG - chr4_1:64465420-64465439 None:intergenic 45.0%
ATTGAAGGGCTGGGTTTATG+TGG - chr4_1:64465456-64465475 None:intergenic 45.0%
GAGTCGCTTGGCAAATTGAA+GGG - chr4_1:64465470-64465489 None:intergenic 45.0%
TGAGTCGCTTGGCAAATTGA+AGG - chr4_1:64465471-64465490 None:intergenic 45.0%
TGCCAAGCGACTCATATCAA+TGG + chr4_1:64465477-64465496 Msa0564000:CDS 45.0%
GCCAAGCGACTCATATCAAT+GGG + chr4_1:64465478-64465497 Msa0564000:CDS 45.0%
ACCCATTGATATGAGTCGCT+TGG - chr4_1:64465482-64465501 None:intergenic 45.0%
!! TGGATGGATTGAGGAGGATT+AGG - chr4_1:64465546-64465565 None:intergenic 45.0%
!! TGGTTATGGATGGATTGAGG+AGG - chr4_1:64465552-64465571 None:intergenic 45.0%
!! TGGTGGTTATGGATGGATTG+AGG - chr4_1:64465555-64465574 None:intergenic 45.0%
! TTGGAGATGGTGGTTATGGA+TGG - chr4_1:64465562-64465581 None:intergenic 45.0%
GTATAGGTGGAAATCAGCGT+CGG - chr4_1:64465644-64465663 None:intergenic 45.0%
TTGAATCCACGAGCTACTTG+TGG - chr4_1:64465781-64465800 None:intergenic 45.0%
CAATCCAGAGTTTAGCTGAG+CGG - chr4_1:64465807-64465826 None:intergenic 45.0%
GGGCAATCCTGGTAATTCAA+TGG - chr4_1:64465914-64465933 None:intergenic 45.0%
! GTCCGATGGGAATCATTTTG+AGG - chr4_1:64466125-64466144 None:intergenic 45.0%
!! CTAAAGGAAGTACTACCGGA+GGG - chr4_1:64466156-64466175 None:intergenic 45.0%
TCCGGTAGTACTTCCTTTAG+CGG + chr4_1:64466156-64466175 Msa0564000:CDS 45.0%
!! ACCGCTAAAGGAAGTACTAC+CGG - chr4_1:64466160-64466179 None:intergenic 45.0%
TTGCAATAGGTCACCGCTAA+AGG - chr4_1:64466172-64466191 None:intergenic 45.0%
GCAAGTGCGTTGTTGAATTG+TGG + chr4_1:64466300-64466319 Msa0564000:CDS 45.0%
AGAAGGGGAAGATAGTGAAG+TGG + chr4_1:64466388-64466407 Msa0564000:CDS 45.0%
AGTGAAGTGGTGTTCTCAAG+TGG + chr4_1:64466401-64466420 Msa0564000:CDS 45.0%
TTGTGGTTGGAACTCGACTT+TGG + chr4_1:64466464-64466483 Msa0564000:CDS 45.0%
CATTGAGGAAATGCCACTAG+AGG - chr4_1:64466510-64466529 None:intergenic 45.0%
CTCTAGTGGCATTTCCTCAA+TGG + chr4_1:64466508-64466527 Msa0564000:CDS 45.0%
GTGGATGAGGATGGAATTGT+AGG + chr4_1:64466600-64466619 Msa0564000:CDS 45.0%
GATGAGGATGGAATTGTAGG+AGG + chr4_1:64466603-64466622 Msa0564000:CDS 45.0%
TGAGGATGGAATTGTAGGAG+GGG + chr4_1:64466605-64466624 Msa0564000:CDS 45.0%
! AGTGTTTGGAAGTGGTGATG+GGG + chr4_1:64466640-64466659 Msa0564000:CDS 45.0%
TGCAATGAAATGGAAGGGGT+TGG + chr4_1:64466695-64466714 Msa0564000:CDS 45.0%
GTCCCGCAGAAAAGAATCTA+AGG + chr4_1:64466742-64466761 Msa0564000:CDS 45.0%
!! AAGGATCATGTGGTGGTGGT+GGG - chr4_1:64465410-64465429 None:intergenic 50.0%
! GGTTTATGTGGCCTTGAGCT+GGG - chr4_1:64465444-64465463 None:intergenic 50.0%
GCTTGGCAAATTGAAGGGCT+GGG - chr4_1:64465465-64465484 None:intergenic 50.0%
GATTGAGGAGGATTAGGCGA+CGG - chr4_1:64465540-64465559 None:intergenic 50.0%
! GAGGTTGGAGATGGTGGTTA+TGG - chr4_1:64465566-64465585 None:intergenic 50.0%
TATGGAGAGGTTGGAGATGG+TGG - chr4_1:64465572-64465591 None:intergenic 50.0%
GGTTATGGAGAGGTTGGAGA+TGG - chr4_1:64465575-64465594 None:intergenic 50.0%
!! ATCAGCGTCGGTCTTTGTGA+TGG - chr4_1:64465632-64465651 None:intergenic 50.0%
ACTTCACAGTTCAACACCCG+TGG + chr4_1:64465664-64465683 Msa0564000:CDS 50.0%
GATAGTGTGAAGGGCAATCC+TGG - chr4_1:64465925-64465944 None:intergenic 50.0%
TCACGTGGCGATAGTGTGAA+GGG - chr4_1:64465934-64465953 None:intergenic 50.0%
! CTCTGGCTCCAAAGCTTCAA+AGG - chr4_1:64466073-64466092 None:intergenic 50.0%
!! CTTTGAAGCTTTGGAGCCAG+AGG + chr4_1:64466071-64466090 Msa0564000:CDS 50.0%
GAGGGAATCAATGGTCCGAT+GGG - chr4_1:64466138-64466157 None:intergenic 50.0%
!! ATCGGACCATTGATTCCCTC+CGG + chr4_1:64466138-64466157 Msa0564000:CDS 50.0%
GTACTACCGGAGGGAATCAA+TGG - chr4_1:64466147-64466166 None:intergenic 50.0%
!! GCTAAAGGAAGTACTACCGG+AGG - chr4_1:64466157-64466176 None:intergenic 50.0%
GAAGTGGTGTTCTCAAGTGG+AGG + chr4_1:64466404-64466423 Msa0564000:CDS 50.0%
GGAGAATGCATGCATGGACA+CGG + chr4_1:64466788-64466807 Msa0564000:CDS 50.0%
!! AAGGATCATGTGGTGGTGGT+GGG - chr4_1:64465410-64465429 None:intergenic 50.0%
! GGTTTATGTGGCCTTGAGCT+GGG - chr4_1:64465444-64465463 None:intergenic 50.0%
GCTTGGCAAATTGAAGGGCT+GGG - chr4_1:64465465-64465484 None:intergenic 50.0%
GATTGAGGAGGATTAGGCGA+CGG - chr4_1:64465540-64465559 None:intergenic 50.0%
! GAGGTTGGAGATGGTGGTTA+TGG - chr4_1:64465566-64465585 None:intergenic 50.0%
TATGGAGAGGTTGGAGATGG+TGG - chr4_1:64465572-64465591 None:intergenic 50.0%
GGTTATGGAGAGGTTGGAGA+TGG - chr4_1:64465575-64465594 None:intergenic 50.0%
!! ATCAGCGTCGGTCTTTGTGA+TGG - chr4_1:64465632-64465651 None:intergenic 50.0%
ACTTCACAGTTCAACACCCG+TGG + chr4_1:64465664-64465683 Msa0564000:CDS 50.0%
GATAGTGTGAAGGGCAATCC+TGG - chr4_1:64465925-64465944 None:intergenic 50.0%
TCACGTGGCGATAGTGTGAA+GGG - chr4_1:64465934-64465953 None:intergenic 50.0%
! CTCTGGCTCCAAAGCTTCAA+AGG - chr4_1:64466073-64466092 None:intergenic 50.0%
!! CTTTGAAGCTTTGGAGCCAG+AGG + chr4_1:64466071-64466090 Msa0564000:CDS 50.0%
GAGGGAATCAATGGTCCGAT+GGG - chr4_1:64466138-64466157 None:intergenic 50.0%
!! ATCGGACCATTGATTCCCTC+CGG + chr4_1:64466138-64466157 Msa0564000:CDS 50.0%
GTACTACCGGAGGGAATCAA+TGG - chr4_1:64466147-64466166 None:intergenic 50.0%
!! GCTAAAGGAAGTACTACCGG+AGG - chr4_1:64466157-64466176 None:intergenic 50.0%
GAAGTGGTGTTCTCAAGTGG+AGG + chr4_1:64466404-64466423 Msa0564000:CDS 50.0%
GGAGAATGCATGCATGGACA+CGG + chr4_1:64466788-64466807 Msa0564000:CDS 50.0%
!! GAAGGATCATGTGGTGGTGG+TGG - chr4_1:64465411-64465430 None:intergenic 55.0%
CCAGAAGGATCATGTGGTGG+TGG - chr4_1:64465414-64465433 None:intergenic 55.0%
CCACCACCACATGATCCTTC+TGG + chr4_1:64465411-64465430 Msa0564000:CDS 55.0%
GAGCTGGGTACGTTACCAGA+AGG - chr4_1:64465429-64465448 None:intergenic 55.0%
! CTGGTAACGTACCCAGCTCA+AGG + chr4_1:64465430-64465449 Msa0564000:CDS 55.0%
! GGGTTTATGTGGCCTTGAGC+TGG - chr4_1:64465445-64465464 None:intergenic 55.0%
CGCTTGGCAAATTGAAGGGC+TGG - chr4_1:64465466-64465485 None:intergenic 55.0%
GAAGGGGGTTATGGAGAGGT+TGG - chr4_1:64465581-64465600 None:intergenic 55.0%
TCCATAACCCCCTTCTCCGA+TGG + chr4_1:64465586-64465605 Msa0564000:CDS 55.0%
TCGTCATGGCCATCGGAGAA+GGG - chr4_1:64465598-64465617 None:intergenic 55.0%
TTCTCCGATGGCCATGACGA+CGG + chr4_1:64465598-64465617 Msa0564000:CDS 55.0%
GAAACCGTCGTCATGGCCAT+CGG - chr4_1:64465605-64465624 None:intergenic 55.0%
TGGCGATGAAACCGTCGTCA+TGG - chr4_1:64465612-64465631 None:intergenic 55.0%
! TGGTGATGAAGTCGGAGCCA+CGG - chr4_1:64465684-64465703 None:intergenic 55.0%
ACCTCCGCTCAGCTAAACTC+TGG + chr4_1:64465800-64465819 Msa0564000:CDS 55.0%
TCCAGAGTTTAGCTGAGCGG+AGG - chr4_1:64465804-64465823 None:intergenic 55.0%
GTCACGTGGCGATAGTGTGA+AGG - chr4_1:64465935-64465954 None:intergenic 55.0%
!! TCAACGGCTCTAAGTGCCTC+TGG - chr4_1:64466090-64466109 None:intergenic 55.0%
GGAGGGAATCAATGGTCCGA+TGG - chr4_1:64466139-64466158 None:intergenic 55.0%
GGTATCAGGGGTTCCTCTAG+TGG + chr4_1:64466494-64466513 Msa0564000:CDS 55.0%
!! TTGGAAGTGGTGATGGGGAG+AGG + chr4_1:64466645-64466664 Msa0564000:CDS 55.0%
! GTGATGGGGAGAGGAGAGAA+AGG + chr4_1:64466654-64466673 Msa0564000:CDS 55.0%
!! ATGGAAGGGGTTGGCTAGAG+AGG + chr4_1:64466704-64466723 Msa0564000:CDS 55.0%
!! GAAGGATCATGTGGTGGTGG+TGG - chr4_1:64465411-64465430 None:intergenic 55.0%
CCAGAAGGATCATGTGGTGG+TGG - chr4_1:64465414-64465433 None:intergenic 55.0%
CCACCACCACATGATCCTTC+TGG + chr4_1:64465411-64465430 Msa0564000:CDS 55.0%
GAGCTGGGTACGTTACCAGA+AGG - chr4_1:64465429-64465448 None:intergenic 55.0%
! CTGGTAACGTACCCAGCTCA+AGG + chr4_1:64465430-64465449 Msa0564000:CDS 55.0%
! GGGTTTATGTGGCCTTGAGC+TGG - chr4_1:64465445-64465464 None:intergenic 55.0%
CGCTTGGCAAATTGAAGGGC+TGG - chr4_1:64465466-64465485 None:intergenic 55.0%
GAAGGGGGTTATGGAGAGGT+TGG - chr4_1:64465581-64465600 None:intergenic 55.0%
TCCATAACCCCCTTCTCCGA+TGG + chr4_1:64465586-64465605 Msa0564000:CDS 55.0%
TCGTCATGGCCATCGGAGAA+GGG - chr4_1:64465598-64465617 None:intergenic 55.0%
TTCTCCGATGGCCATGACGA+CGG + chr4_1:64465598-64465617 Msa0564000:CDS 55.0%
GAAACCGTCGTCATGGCCAT+CGG - chr4_1:64465605-64465624 None:intergenic 55.0%
TGGCGATGAAACCGTCGTCA+TGG - chr4_1:64465612-64465631 None:intergenic 55.0%
! TGGTGATGAAGTCGGAGCCA+CGG - chr4_1:64465684-64465703 None:intergenic 55.0%
ACCTCCGCTCAGCTAAACTC+TGG + chr4_1:64465800-64465819 Msa0564000:CDS 55.0%
TCCAGAGTTTAGCTGAGCGG+AGG - chr4_1:64465804-64465823 None:intergenic 55.0%
GTCACGTGGCGATAGTGTGA+AGG - chr4_1:64465935-64465954 None:intergenic 55.0%
!! TCAACGGCTCTAAGTGCCTC+TGG - chr4_1:64466090-64466109 None:intergenic 55.0%
GGAGGGAATCAATGGTCCGA+TGG - chr4_1:64466139-64466158 None:intergenic 55.0%
GGTATCAGGGGTTCCTCTAG+TGG + chr4_1:64466494-64466513 Msa0564000:CDS 55.0%
!! TTGGAAGTGGTGATGGGGAG+AGG + chr4_1:64466645-64466664 Msa0564000:CDS 55.0%
! GTGATGGGGAGAGGAGAGAA+AGG + chr4_1:64466654-64466673 Msa0564000:CDS 55.0%
!! ATGGAAGGGGTTGGCTAGAG+AGG + chr4_1:64466704-64466723 Msa0564000:CDS 55.0%
CGGTAGAGGTGGAGGGTGAT+AGG - chr4_1:64465520-64465539 None:intergenic 60.0%
TAGGCGACGGTAGAGGTGGA+GGG - chr4_1:64465527-64465546 None:intergenic 60.0%
TTAGGCGACGGTAGAGGTGG+AGG - chr4_1:64465528-64465547 None:intergenic 60.0%
GGATTAGGCGACGGTAGAGG+TGG - chr4_1:64465531-64465550 None:intergenic 60.0%
GGAGGATTAGGCGACGGTAG+AGG - chr4_1:64465534-64465553 None:intergenic 60.0%
CGGAGAAGGGGGTTATGGAG+AGG - chr4_1:64465585-64465604 None:intergenic 60.0%
GCCATCGGAGAAGGGGGTTA+TGG - chr4_1:64465590-64465609 None:intergenic 60.0%
GTCATGGCCATCGGAGAAGG+GGG - chr4_1:64465596-64465615 None:intergenic 60.0%
CGTCATGGCCATCGGAGAAG+GGG - chr4_1:64465597-64465616 None:intergenic 60.0%
GTCGTCATGGCCATCGGAGA+AGG - chr4_1:64465599-64465618 None:intergenic 60.0%
GGTGATGAAGTCGGAGCCAC+GGG - chr4_1:64465683-64465702 None:intergenic 60.0%
CGAGCTACTTGTGGAGCCCA+AGG - chr4_1:64465772-64465791 None:intergenic 60.0%
TGGGCTCCACAAGTAGCTCG+TGG + chr4_1:64465772-64465791 Msa0564000:CDS 60.0%
GGGGAGAGGAGAGAAAGGAG+AGG + chr4_1:64466659-64466678 Msa0564000:CDS 60.0%
!! AAGGGGTTGGCTAGAGAGGC+AGG + chr4_1:64466708-64466727 Msa0564000:CDS 60.0%
!! AGGGGTTGGCTAGAGAGGCA+GGG + chr4_1:64466709-64466728 Msa0564000:CDS 60.0%
GTTGGCTAGAGAGGCAGGGA+AGG + chr4_1:64466713-64466732 Msa0564000:CDS 60.0%
GCTAGAGAGGCAGGGAAGGA+AGG + chr4_1:64466717-64466736 Msa0564000:CDS 60.0%
AGAGAGGCAGGGAAGGAAGG+TGG + chr4_1:64466720-64466739 Msa0564000:CDS 60.0%
CGGTAGAGGTGGAGGGTGAT+AGG - chr4_1:64465520-64465539 None:intergenic 60.0%
TAGGCGACGGTAGAGGTGGA+GGG - chr4_1:64465527-64465546 None:intergenic 60.0%
TTAGGCGACGGTAGAGGTGG+AGG - chr4_1:64465528-64465547 None:intergenic 60.0%
GGATTAGGCGACGGTAGAGG+TGG - chr4_1:64465531-64465550 None:intergenic 60.0%
GGAGGATTAGGCGACGGTAG+AGG - chr4_1:64465534-64465553 None:intergenic 60.0%
CGGAGAAGGGGGTTATGGAG+AGG - chr4_1:64465585-64465604 None:intergenic 60.0%
GCCATCGGAGAAGGGGGTTA+TGG - chr4_1:64465590-64465609 None:intergenic 60.0%
GTCATGGCCATCGGAGAAGG+GGG - chr4_1:64465596-64465615 None:intergenic 60.0%
CGTCATGGCCATCGGAGAAG+GGG - chr4_1:64465597-64465616 None:intergenic 60.0%
GTCGTCATGGCCATCGGAGA+AGG - chr4_1:64465599-64465618 None:intergenic 60.0%
GGTGATGAAGTCGGAGCCAC+GGG - chr4_1:64465683-64465702 None:intergenic 60.0%
CGAGCTACTTGTGGAGCCCA+AGG - chr4_1:64465772-64465791 None:intergenic 60.0%
TGGGCTCCACAAGTAGCTCG+TGG + chr4_1:64465772-64465791 Msa0564000:CDS 60.0%
GGGGAGAGGAGAGAAAGGAG+AGG + chr4_1:64466659-64466678 Msa0564000:CDS 60.0%
!! AAGGGGTTGGCTAGAGAGGC+AGG + chr4_1:64466708-64466727 Msa0564000:CDS 60.0%
!! AGGGGTTGGCTAGAGAGGCA+GGG + chr4_1:64466709-64466728 Msa0564000:CDS 60.0%
GTTGGCTAGAGAGGCAGGGA+AGG + chr4_1:64466713-64466732 Msa0564000:CDS 60.0%
GCTAGAGAGGCAGGGAAGGA+AGG + chr4_1:64466717-64466736 Msa0564000:CDS 60.0%
AGAGAGGCAGGGAAGGAAGG+TGG + chr4_1:64466720-64466739 Msa0564000:CDS 60.0%
Chromosome Type Strat End Strand Name
chr4_1 gene 64465403 64466821 64465403 ID=Msa0564000;Name=Msa0564000
chr4_1 mRNA 64465403 64466821 64465403 ID=Msa0564000-mRNA-1;Parent=Msa0564000;Name=Msa0564000-mRNA-1;_AED=0.33;_eAED=0.33;_QI=0|-1|0|1|-1|1|1|0|472
chr4_1 exon 64465403 64466821 64465403 ID=Msa0564000-mRNA-1:exon:20618;Parent=Msa0564000-mRNA-1
chr4_1 CDS 64465403 64466821 64465403 ID=Msa0564000-mRNA-1:cds;Parent=Msa0564000-mRNA-1
Gene Sequence

>Msa0564000

ATGTCCCACCACCACCACATGATCCTTCTGGTAACGTACCCAGCTCAAGGCCACATAAACCCAGCCCTTCAATTTGCCAAGCGACTCATATCAATGGGTGCACATGTCACTCTTCCTATCACCCTCCACCTCTACCGTCGCCTAATCCTCCTCAATCCATCCATAACCACCATCTCCAACCTCTCCATAACCCCCTTCTCCGATGGCCATGACGACGGTTTCATCGCCATCACAAAGACCGACGCTGATTTCCACCTATACACTTCACAGTTCAACACCCGTGGCTCCGACTTCATCACCAATCTTATACTCTCTGCCAAACAAGAATCCAAACCTTTCACTTGCTTACTCTACACGTTAATGCTTCCTTGGGCTCCACAAGTAGCTCGTGGATTCAACCTCCGCTCAGCTAAACTCTGGATTGAACCCGCCACAGTGTTTGATATTCTCTATTACTACTTTCATGGTTATAGTAACCATATCAATAACCAAAACCAAAACCAAACTACCATTGAATTACCAGGATTGCCCTTCACACTATCGCCACGTGACATACCTTCTTTTTTATTTACTTCAAATCCTGGTGACTTGTCTTTTGTTTTTCCATATTTTCAACAAGATTTTCATGAACTCGATGTTGAAACCAATCCGATAATACTCGTAAACACCTTTGAAGCTTTGGAGCCAGAGGCACTTAGAGCCGTTGATACTCATCATAACCTCAAAATGATTCCCATCGGACCATTGATTCCCTCCGGTAGTACTTCCTTTAGCGGTGACCTATTGCAACCTTCAAATGACTATATTGAATGGTTGAACTCAAAGCCAAAATCTTCTGTTGTTTATGTTTCTTTTGGTAGTTACTTTGTTTTGTCTAAGCGACAAACTGACGAAATTGCAAGTGCGTTGTTGAATTGTGGGTTTTCATTCTTGTGGGTCATGAGAGAAAAAGAAGAGGAGTTGAAATTTAAAGATGAGTTGGAAAAGAAGGGGAAGATAGTGAAGTGGTGTTCTCAAGTGGAGGTTCTTTCACATTCTTCTTTGGGTTGTTTTTTGACTCATTGTGGTTGGAACTCGACTTTGGAAAGTTTGGTATCAGGGGTTCCTCTAGTGGCATTTCCTCAATGGACTGATCAAAAGACTAATGCAAAACTAATTGAAGATGTGTGGAAGATAGGGGTGAGAGTTGATGATAAAGTGGATGAGGATGGAATTGTAGGAGGGGATGAAATTAGAAAGTGTTTGGAAGTGGTGATGGGGAGAGGAGAGAAAGGAGAGGAATTGAGAAAGAATGCAATGAAATGGAAGGGGTTGGCTAGAGAGGCAGGGAAGGAAGGTGGTCCCGCAGAAAAGAATCTAAGGAAATTTTTGGATGATATATTATTGGAGAATGCATGCATGGACACGGCTGAAAATTGA
Protein sequence

>Msa0564000

MSHHHHMILLVTYPAQGHINPALQFAKRLISMGAHVTLPITLHLYRRLILLNPSITTISNLSITPFSDGHDDGFIAITKTDADFHLYTSQFNTRGSDFITNLILSAKQESKPFTCLLYTLMLPWAPQVARGFNLRSAKLWIEPATVFDILYYYFHGYSNHINNQNQNQTTIELPGLPFTLSPRDIPSFLFTSNPGDLSFVFPYFQQDFHELDVETNPIILVNTFEALEPEALRAVDTHHNLKMIPIGPLIPSGSTSFSGDLLQPSNDYIEWLNSKPKSSVVYVSFGSYFVLSKRQTDEIASALLNCGFSFLWVMREKEEELKFKDELEKKGKIVKWCSQVEVLSHSSLGCFLTHCGWNSTLESLVSGVPLVAFPQWTDQKTNAKLIEDVWKIGVRVDDKVDEDGIVGGDEIRKCLEVVMGRGEKGEELRKNAMKWKGLAREAGKEGGPAEKNLRKFLDDILLENACMDTAEN*