AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0072590


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0072590 MtrunA17_Chr1g0179621 97.198 464 13 0 1 464 1 464 0.0 908
Msa0072590 MtrunA17_Chr7g0265481 74.194 465 115 3 1 464 1 461 0.0 624
Msa0072590 MtrunA17_Chr3g0139541 50.688 436 200 6 31 463 44 467 1.56e-128 380
Msa0072590 MtrunA17_Chr8g0373471 48.276 435 216 3 29 462 39 465 3.64e-122 364
Msa0072590 MtrunA17_Chr5g0403901 51.325 415 190 3 49 463 67 469 8.87e-115 345
Msa0072590 MtrunA17_Chr1g0157751 44.076 422 218 5 49 462 44 455 5.72e-103 315
Msa0072590 MtrunA17_Chr8g0380211 47.356 416 202 3 55 463 71 476 2.48e-102 314
Msa0072590 MtrunA17_Chr8g0380191 43.343 353 153 4 111 463 10 315 1.69e-76 242
Msa0072590 MtrunA17_Chr2g0280401 31.294 425 252 10 57 458 55 462 1.55e-39 148
Msa0072590 MtrunA17_Chr3g0139621 51.163 86 20 1 330 393 60 145 3.49e-11 61.2
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0072590 AT2G36630.1 69.848 461 127 4 5 464 9 458 0.0 578
Msa0072590 AT2G25737.1 52.370 422 179 5 50 463 66 473 1.01e-127 379
Msa0072590 AT2G25737.2 51.250 320 134 5 50 361 66 371 1.60e-84 265
Msa0072590 AT1G11540.2 27.876 452 301 7 18 458 9 446 1.16e-36 140
Msa0072590 AT1G11540.1 27.851 377 247 7 93 458 1 363 3.19e-35 135
Msa0072590 AT4G21250.1 30.645 434 247 8 26 442 33 429 4.33e-33 130
Msa0072590 AT1G61740.1 26.549 452 290 11 30 458 22 454 1.84e-32 129
Msa0072590 AT4G21260.1 27.400 427 235 11 24 442 14 373 1.28e-24 105

Find 113 sgRNAs with CRISPR-Local

Find 240 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TTCTGGAGGTGGATTTATTT+TGG 0.132041 1_2:-45640968 Msa0072590:CDS
CCTATGCTTAATCTTCTTCT+TGG 0.184547 1_2:-45642836 Msa0072590:CDS
CCATGAGTTCATGGGATTCT+TGG 0.257074 1_2:-45639928 Msa0072590:CDS
GCTACTTTGGTTAATTCTAA+TGG 0.257433 1_2:-45641860 Msa0072590:CDS
GTTCTGGAACAGATAGAATT+TGG 0.259719 1_2:-45643057 Msa0072590:CDS
ATGCCTCACATATGTATTCT+AGG 0.262467 1_2:+45641070 None:intergenic
TTACCTTGATGATTTGAATA+AGG 0.268202 1_2:+45641516 None:intergenic
GTTGGAGGCTTACTTGGTTC+TGG 0.271593 1_2:-45640985 Msa0072590:CDS
TTCTCTGTTTCAACCTTAGA+TGG 0.285945 1_2:-45641580 Msa0072590:CDS
AGAAAATTAGTTGCATTTCT+TGG 0.286067 1_2:-45640146 Msa0072590:CDS
TTGGGTGCTCTTCGGCTTGC+AGG 0.288226 1_2:-45641376 Msa0072590:intron
AGAAAGAGCAGCAGCAGATT+TGG 0.288931 1_2:+45642805 None:intergenic
AACTCTAACCGTTATGGTTC+TGG 0.290533 1_2:-45643073 Msa0072590:CDS
CTAAAATCCTCTTCCATCTA+AGG 0.311247 1_2:+45641567 None:intergenic
GGGCCTCTTCTCCTTGAGAT+AGG 0.312567 1_2:-45640946 Msa0072590:CDS
AGGACAGTGATAAGCCAAAA+AGG 0.314523 1_2:+45642222 None:intergenic
CCTCATCACAGTGTCTGTTT+TGG 0.316799 1_2:-45640195 Msa0072590:CDS
ACCTAGTTGGAAACTTGTTT+TGG 0.323959 1_2:-45642930 Msa0072590:CDS
AACATTGCTTTCAGTATAGT+TGG 0.324897 1_2:-45639471 Msa0072590:three_prime_UTR
CATGAGTTCATGGGATTCTT+GGG 0.327579 1_2:-45639927 Msa0072590:CDS
CTCATTATCATTCTCTTCAT+AGG 0.331159 1_2:-45642201 Msa0072590:intron
GGCTTACTTGGTTCTGGAGG+TGG 0.346407 1_2:-45640979 Msa0072590:CDS
GCTAAATCATAGTCTAATAT+TGG 0.352346 1_2:+45642309 None:intergenic
GGAATTGTTGGAGGCTTACT+TGG 0.374041 1_2:-45640991 Msa0072590:CDS
GACAAATATTAGTAAGTTAG+TGG 0.376098 1_2:-45639771 Msa0072590:three_prime_UTR
TTTGTGCAGGAACTTCTTTA+AGG 0.376797 1_2:-45642087 Msa0072590:intron
GAAAATTAGTTGCATTTCTT+GGG 0.377774 1_2:-45640145 Msa0072590:CDS
AAGAGGTTCCCTATGCCTTA+TGG 0.397338 1_2:-45640334 Msa0072590:intron
TAATTAATTTAGAGTAAAGT+AGG 0.398409 1_2:-45639891 Msa0072590:three_prime_UTR
GTTGGTGGTGTTGGTGGTGG+TGG 0.400923 1_2:-45642869 Msa0072590:CDS
TTTCAGCCAATGCTTATGCT+TGG 0.402032 1_2:-45642279 Msa0072590:CDS
ACTGTTGGTGGTGTTGGTGG+TGG 0.402045 1_2:-45642872 Msa0072590:CDS
AACTGCTAAGCAAGCTACTT+TGG 0.413957 1_2:-45641873 Msa0072590:CDS
TTCAGCCAATGCTTATGCTT+GGG 0.426089 1_2:-45642278 Msa0072590:CDS
AGGCCTGCAGTGTATGGTAT+TGG 0.427218 1_2:-45641395 Msa0072590:CDS
TTATATCTACCTAGCTACTT+GGG 0.428075 1_2:-45639699 Msa0072590:three_prime_UTR
TAAAGAAAAGAAGTCAACTA+TGG 0.432207 1_2:-45641689 Msa0072590:intron
GTCATTGTATTCATCCTCTC+TGG 0.433319 1_2:-45640113 Msa0072590:CDS
GATACACAACCATGAGTTCA+TGG 0.435806 1_2:-45639937 Msa0072590:CDS
GGAACTGTTGGTGGTGTTGG+TGG 0.439869 1_2:-45642875 Msa0072590:CDS
TTTATATCTACCTAGCTACT+TGG 0.440934 1_2:-45639700 Msa0072590:three_prime_UTR
TGTGCAATGAGTGGTATTGT+AGG 0.441307 1_2:-45641015 Msa0072590:CDS
GTATGGTATTGGGTGCTCTT+CGG 0.446576 1_2:-45641384 Msa0072590:CDS
TCATCAAACTCTAACCGTTA+TGG 0.454959 1_2:-45643079 Msa0072590:CDS
GGGCATCAGCATCATCAGTT+TGG 0.457173 1_2:-45642368 Msa0072590:CDS
TGTGGAACTGTTGGTGGTGT+TGG 0.460079 1_2:-45642878 Msa0072590:CDS
CCTCCTTATTCAAATCATCA+AGG 0.464837 1_2:-45641519 Msa0072590:intron
AGCAAACAAAAGGAAAATCA+AGG 0.469348 1_2:-45639864 Msa0072590:three_prime_UTR
GTTTCAACCTTAGATGGAAG+AGG 0.471805 1_2:-45641574 Msa0072590:CDS
CGCAGAGAGAGTAGCAAGAC+AGG 0.482761 1_2:+45643153 None:intergenic
CACAGAATGAGGATGGGCAC+AGG 0.484366 1_2:-45641096 Msa0072590:CDS
AGTAGGAAATAGCAAACAAA+AGG 0.486129 1_2:-45639874 Msa0072590:three_prime_UTR
GGCCTGCAGTGTATGGTATT+GGG 0.487342 1_2:-45641394 Msa0072590:CDS
GGTATTGTAGGTGGAATTGT+TGG 0.495520 1_2:-45641003 Msa0072590:CDS
TGCAGGAATTGGAACCTAGT+TGG 0.498731 1_2:-45642943 Msa0072590:intron
GTGTTTGGTTTATGCAGTGA+TGG 0.503575 1_2:+45643276 None:intergenic
GGATCAGCATGTGGAACTGT+TGG 0.509239 1_2:-45642887 Msa0072590:CDS
AATCAAGGGTTCATAGATGT+TGG 0.512920 1_2:-45639849 Msa0072590:three_prime_UTR
TTTGCCAGTGCTCTCACCAT+GGG 0.516548 1_2:-45640083 Msa0072590:intron
ATTGTAGGTGGAATTGTTGG+AGG 0.521718 1_2:-45641000 Msa0072590:CDS
TCTTTAAGGTCATTCTTCAA+AGG 0.527965 1_2:-45642073 Msa0072590:CDS
CACTCATTGCACAAAATGCA+AGG 0.529460 1_2:+45641025 None:intergenic
CAAAGATCACAGAATGAGGA+TGG 0.531696 1_2:-45641103 Msa0072590:CDS
CATGGAATATCTATATCTCT+AGG 0.532208 1_2:-45639808 Msa0072590:three_prime_UTR
TATGTGAGGCATCAATAGAA+TGG 0.532905 1_2:-45641059 Msa0072590:CDS
ATGTAGAGGCCTGCAGTGTA+TGG 0.533143 1_2:-45641401 Msa0072590:CDS
TGAGATAGGTGTCATCCCTC+AGG 0.534173 1_2:-45640932 Msa0072590:intron
TCTAATGGAGAATTTAAAGC+AGG 0.535837 1_2:-45641845 Msa0072590:intron
CCTTGATGATTTGAATAAGG+AGG 0.539252 1_2:+45641519 None:intergenic
GTAGCAATCAAAATCAAAAG+AGG 0.541239 1_2:+45643331 None:intergenic
TATATCTACCTAGCTACTTG+GGG 0.545376 1_2:-45639698 Msa0072590:three_prime_UTR
TTGAATTCTACATTCTCAAG+AGG 0.545752 1_2:-45640351 Msa0072590:CDS
TGAAGATTACCATAAGGCAT+AGG 0.546602 1_2:+45640325 None:intergenic
CCAAGAATCCCATGAACTCA+TGG 0.548829 1_2:+45639928 None:intergenic
ATTACCCATGGTGAGAGCAC+TGG 0.549613 1_2:+45640079 None:intergenic
GGAGGCTTACTTGGTTCTGG+AGG 0.552125 1_2:-45640982 Msa0072590:CDS
TATCTGTTCCAGAACCATAA+CGG 0.554023 1_2:+45643065 None:intergenic
AATTAGTTGCATTTCTTGGG+AGG 0.558277 1_2:-45640142 Msa0072590:CDS
TCTTCAAAGGAATTGATATG+TGG 0.558689 1_2:-45642060 Msa0072590:CDS
GCCAAAACAAGTTTCCAACT+AGG 0.559356 1_2:+45642929 None:intergenic
GAAGATTACCATAAGGCATA+GGG 0.560541 1_2:+45640326 None:intergenic
ATTAGTTGCATTTCTTGGGA+GGG 0.561323 1_2:-45640141 Msa0072590:CDS
TCAAAGGAATTGATATGTGG+AGG 0.563304 1_2:-45642057 Msa0072590:CDS
TGGCTATTTATTTGTTGCAG+AGG 0.563811 1_2:+45643296 None:intergenic
TCAGCATGTGGAACTGTTGG+TGG 0.568455 1_2:-45642884 Msa0072590:CDS
ACACATATCATATTGTGTTG+TGG 0.570474 1_2:-45639579 Msa0072590:three_prime_UTR
CTTATGTGTGAAAATAATTG+TGG 0.572003 1_2:-45639633 Msa0072590:three_prime_UTR
CTATGAAGAGAATGATAATG+AGG 0.573022 1_2:+45642202 None:intergenic
TGTACAAAGATCACAGAATG+AGG 0.585072 1_2:-45641107 Msa0072590:CDS
CTTATGCTTGGGATAACTGT+TGG 0.586804 1_2:-45642267 Msa0072590:CDS
GTTTGATGATGATGATAACA+AGG 0.587310 1_2:+45643093 None:intergenic
GAGATATAGATATTCCATGT+TGG 0.591536 1_2:+45639812 None:intergenic
TGGTTTGCAGACTGATGTAG+AGG 0.594763 1_2:-45641415 Msa0072590:intron
GTTATCCCAAGCATAAGCAT+TGG 0.599534 1_2:+45642273 None:intergenic
GATGATAACAAGGAGAATGA+TGG 0.600061 1_2:+45643103 None:intergenic
AGTGGCACATCCAACAAAAG+AGG 0.604209 1_2:-45642334 Msa0072590:CDS
GCAAACAAAAGGAAAATCAA+GGG 0.610916 1_2:-45639863 Msa0072590:three_prime_UTR
ACACCTATCTCAAGGAGAAG+AGG 0.611353 1_2:+45640943 None:intergenic
CCAAGAAGAAGATTAAGCAT+AGG 0.611625 1_2:+45642836 None:intergenic
ATACACAACCATGAGTTCAT+GGG 0.614070 1_2:-45639936 Msa0072590:CDS
CACCCAATACCATACACTGC+AGG 0.618863 1_2:+45641392 None:intergenic
CAAAGGAATTGATATGTGGA+GGG 0.620974 1_2:-45642056 Msa0072590:CDS
ACAGAATGAGGATGGGCACA+GGG 0.625351 1_2:-45641095 Msa0072590:CDS
AGTTTGGTATAATTTGAGAG+TGG 0.626700 1_2:-45642352 Msa0072590:CDS
GAGGGATGACACCTATCTCA+AGG 0.628407 1_2:+45640935 None:intergenic
GAGGGTAGAGACTCTTCTCA+AGG 0.635367 1_2:-45642038 Msa0072590:intron
ATATCTACCTAGCTACTTGG+GGG 0.638368 1_2:-45639697 Msa0072590:three_prime_UTR
ACTCATTGCACAAAATGCAA+GGG 0.642562 1_2:+45641026 None:intergenic
AAAGATCACAGAATGAGGAT+GGG 0.663631 1_2:-45641102 Msa0072590:CDS
GCAATGAGTGGTATTGTAGG+TGG 0.666887 1_2:-45641012 Msa0072590:CDS
CCAAAACAGACACTGTGATG+AGG 0.668862 1_2:+45640195 None:intergenic
TTAATGTCTGTTGACCAACA+TGG 0.683651 1_2:-45639826 Msa0072590:three_prime_UTR
GAGCCTAGAATACATATGTG+AGG 0.685813 1_2:-45641073 Msa0072590:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TTTTTTTAATGTGTTATTGA+AGG - chr1_2:45639744-45639763 Msa0072590:three_prime_UTR 15.0%
!! TGTATATATGTTTATGTTTA+TGG - chr1_2:45639773-45639792 Msa0072590:three_prime_UTR 15.0%
!!! TTTTTTCTATTTTGTTATTG+CGG - chr1_2:45640341-45640360 Msa0072590:CDS 15.0%
!!! TTTTATTTTTATTTTTGTGC+AGG - chr1_2:45640656-45640675 Msa0072590:intron 15.0%
!! AAAACAAAAATTAGAGAAAA+AGG + chr1_2:45640847-45640866 None:intergenic 15.0%
!! TAAAATAAACAGTTTATTGT+TGG - chr1_2:45641321-45641340 Msa0072590:intron 15.0%
!!! ATTTATAGAGTTTTAAGAAA+AGG + chr1_2:45641532-45641551 None:intergenic 15.0%
!!! ATGTTATACATTTTTATTTC+AGG - chr1_2:45642766-45642785 Msa0072590:intron 15.0%
!!! TAATTAATTTAGAGTAAAGT+AGG - chr1_2:45642865-45642884 Msa0072590:CDS 15.0%
!! TATAAAAAAAGTTAAGCATA+CGG + chr1_2:45643042-45643061 None:intergenic 15.0%
!!! ATAAACTATGAAGTTTTTTG+TGG + chr1_2:45639570-45639589 None:intergenic 20.0%
!! AAAGAGTAAGAAAAATTTAC+AGG + chr1_2:45639725-45639744 None:intergenic 20.0%
!!! TATCAATGTTTCTAATTAGT+AGG - chr1_2:45640138-45640157 Msa0072590:CDS 20.0%
!! AGAATAAACTTCAATATCAA+CGG + chr1_2:45640266-45640285 None:intergenic 20.0%
!!! ATTGATTTTAGGTATGATAA+TGG - chr1_2:45640365-45640384 Msa0072590:CDS 20.0%
!!! TTGATTTTAGGTATGATAAT+GGG - chr1_2:45640366-45640385 Msa0072590:CDS 20.0%
!!! ACTGTTTTATTCATTTTTCA+AGG - chr1_2:45640625-45640644 Msa0072590:intron 20.0%
!!! AATCATTAACTCAAGTTTTT+AGG - chr1_2:45640806-45640825 Msa0072590:intron 20.0%
!! AAATAAATTCATAAGGCATA+GGG + chr1_2:45642526-45642545 None:intergenic 20.0%
!!! ATTTTTATTTCAGGTATTGT+TGG - chr1_2:45642775-45642794 Msa0072590:intron 20.0%
!!! TAGTCATTTTACTAATTACT+TGG + chr1_2:45643094-45643113 None:intergenic 20.0%
!!! AATTATTTTCACACATAAGA+AGG + chr1_2:45643122-45643141 None:intergenic 20.0%
!!! ACATTTTTTGAGAATATCAA+AGG + chr1_2:45643331-45643350 None:intergenic 20.0%
! TTTATAGTAGAAATCGAACT+CGG - chr1_2:45639994-45640013 Msa0072590:intron 25.0%
! TAATTAGTAGGAATCAAACT+CGG - chr1_2:45640150-45640169 Msa0072590:CDS 25.0%
!!! TGATTTTAGGTATGATAATG+GGG - chr1_2:45640367-45640386 Msa0072590:CDS 25.0%
! GCTAAATCATAGTCTAATAT+TGG + chr1_2:45640450-45640469 None:intergenic 25.0%
! TATACAAATTTCCACAATAG+TGG - chr1_2:45640934-45640953 Msa0072590:CDS 25.0%
!!! TAGTTGACTTCTTTTCTTTA+GGG + chr1_2:45641067-45641086 None:intergenic 25.0%
!!! ATAGTTGACTTCTTTTCTTT+AGG + chr1_2:45641068-45641087 None:intergenic 25.0%
! TAAAGAAAAGAAGTCAACTA+TGG - chr1_2:45641067-45641086 Msa0072590:CDS 25.0%
!! TTACCTTGATGATTTGAATA+AGG + chr1_2:45641243-45641262 None:intergenic 25.0%
! ACTGCAATTCATAATATGTT+TGG + chr1_2:45641427-45641446 None:intergenic 25.0%
! AAAACTCTATAAATGCAATG+TGG - chr1_2:45641538-45641557 Msa0072590:CDS 25.0%
! ATGCTGATAATTTAAATTGC+AGG - chr1_2:45642328-45642347 Msa0072590:CDS 25.0%
!! GGATCCATTTTCAATTTAAT+TGG - chr1_2:45642475-45642494 Msa0072590:intron 25.0%
! CAAATAAATTCATAAGGCAT+AGG + chr1_2:45642527-45642546 None:intergenic 25.0%
! CTATGCCTTATGAATTTATT+TGG - chr1_2:45642525-45642544 Msa0072590:intron 25.0%
! TGCAACCAAATAAATTCATA+AGG + chr1_2:45642533-45642552 None:intergenic 25.0%
! AGAAAATTAGTTGCATTTCT+TGG - chr1_2:45642610-45642629 Msa0072590:intron 25.0%
! GAAAATTAGTTGCATTTCTT+GGG - chr1_2:45642611-45642630 Msa0072590:intron 25.0%
! TCATATAAATCAGCAAATTG+AGG + chr1_2:45642715-45642734 None:intergenic 25.0%
! GACAAATATTAGTAAGTTAG+TGG - chr1_2:45642985-45643004 Msa0072590:intron 25.0%
!!! AGTTTTCAGGATTGAAATTT+TGG - chr1_2:45643015-45643034 Msa0072590:intron 25.0%
! CTTATGTGTGAAAATAATTG+TGG - chr1_2:45643123-45643142 Msa0072590:CDS 25.0%
!!! TTGTTTTTGCTTTCTTTTGT+TGG - chr1_2:45643207-45643226 Msa0072590:exon 25.0%
GTAGCAATCAAAATCAAAAG+AGG + chr1_2:45639428-45639447 None:intergenic 30.0%
!!! ATGATGGTTTTTGGTTGTTA+TGG + chr1_2:45639640-45639659 None:intergenic 30.0%
!! GTTTGATGATGATGATAACA+AGG + chr1_2:45639666-45639685 None:intergenic 30.0%
TTTGTGTGTTTATTATGTGC+AGG - chr1_2:45639796-45639815 Msa0072590:three_prime_UTR 30.0%
TGTTTATTATGTGCAGGAAT+TGG - chr1_2:45639802-45639821 Msa0072590:three_prime_UTR 30.0%
!!! GCTACAGTTATTGGTTTTTT+TGG - chr1_2:45639848-45639867 Msa0072590:three_prime_UTR 30.0%
TATCAGTGTGACTAATTAGT+AGG - chr1_2:45640060-45640079 Msa0072590:intron 30.0%
TAATTAGTAGGAATCGAACT+CGG - chr1_2:45640072-45640091 Msa0072590:intron 30.0%
AGAAACATTGATACCATGAA+AGG + chr1_2:45640131-45640150 None:intergenic 30.0%
TCTAGGTTTACAATACTAGA+TGG - chr1_2:45640176-45640195 Msa0072590:CDS 30.0%
!! GTTATTGCGGAATTGATTTT+AGG - chr1_2:45640354-45640373 Msa0072590:CDS 30.0%
!!! GATTTTAGGTATGATAATGG+GGG - chr1_2:45640368-45640387 Msa0072590:CDS 30.0%
AGTTTGGTATAATTTGAGAG+TGG - chr1_2:45640404-45640423 Msa0072590:CDS 30.0%
! CTATGAAGAGAATGATAATG+AGG + chr1_2:45640557-45640576 None:intergenic 30.0%
CTCATTATCATTCTCTTCAT+AGG - chr1_2:45640555-45640574 Msa0072590:intron 30.0%
!! TCTTTAAGGTCATTCTTCAA+AGG - chr1_2:45640683-45640702 Msa0072590:intron 30.0%
TCTTCAAAGGAATTGATATG+TGG - chr1_2:45640696-45640715 Msa0072590:intron 30.0%
TCTTGACTAGAATTGACTAA+TGG - chr1_2:45640749-45640768 Msa0072590:intron 30.0%
! GCTACTTTGGTTAATTCTAA+TGG - chr1_2:45640896-45640915 Msa0072590:intron 30.0%
! TCTAATGGAGAATTTAAAGC+AGG - chr1_2:45640911-45640930 Msa0072590:intron 30.0%
AGATAAGATAACCACTATTG+TGG + chr1_2:45640948-45640967 None:intergenic 30.0%
!! TTCTTTTCTTTAGGGATCAA+TGG + chr1_2:45641059-45641078 None:intergenic 30.0%
!! AAACAGAGAATTTGCTGAAA+GGG + chr1_2:45641166-45641185 None:intergenic 30.0%
TTGGAAACTGAAACAGAAAA+TGG + chr1_2:45641593-45641612 None:intergenic 30.0%
! TCAGTTTCCAATTGCATTTT+TGG - chr1_2:45641602-45641621 Msa0072590:intron 30.0%
GGTAAGCAAAATTGAAAAGA+GGG + chr1_2:45641863-45641882 None:intergenic 30.0%
TGGTAAGCAAAATTGAAAAG+AGG + chr1_2:45641864-45641883 None:intergenic 30.0%
CAATTGACAATTGAAAATGC+TGG + chr1_2:45642100-45642119 None:intergenic 30.0%
!!! AGTTTTTTATTTGTCACCAC+CGG + chr1_2:45642296-45642315 None:intergenic 30.0%
TTGAATTCTACATTCTCAAG+AGG - chr1_2:45642405-45642424 Msa0072590:intron 30.0%
!! AGTTGATGAAGATTACCATA+AGG + chr1_2:45642440-45642459 None:intergenic 30.0%
CTGGCCAATTAAATTGAAAA+TGG + chr1_2:45642482-45642501 None:intergenic 30.0%
CCAGTGTTATAATATTGTAC+TGG + chr1_2:45642501-45642520 None:intergenic 30.0%
CCAGTACAATATTATAACAC+TGG - chr1_2:45642498-45642517 Msa0072590:intron 30.0%
ATAAATCAGCAAATTGAGGT+AGG + chr1_2:45642711-45642730 None:intergenic 30.0%
AGTAGGAAATAGCAAACAAA+AGG - chr1_2:45642882-45642901 Msa0072590:CDS 30.0%
AGCAAACAAAAGGAAAATCA+AGG - chr1_2:45642892-45642911 Msa0072590:CDS 30.0%
GCAAACAAAAGGAAAATCAA+GGG - chr1_2:45642893-45642912 Msa0072590:CDS 30.0%
GAGATATAGATATTCCATGT+TGG + chr1_2:45642947-45642966 None:intergenic 30.0%
CATGGAATATCTATATCTCT+AGG - chr1_2:45642948-45642967 Msa0072590:intron 30.0%
TTTATATCTACCTAGCTACT+TGG - chr1_2:45643056-45643075 Msa0072590:CDS 30.0%
TTATATCTACCTAGCTACTT+GGG - chr1_2:45643057-45643076 Msa0072590:CDS 30.0%
ACACATATCATATTGTGTTG+TGG - chr1_2:45643177-45643196 Msa0072590:CDS 30.0%
AACATTGCTTTCAGTATAGT+TGG - chr1_2:45643285-45643304 Msa0072590:five_prime_UTR 30.0%
! TGGCTATTTATTTGTTGCAG+AGG + chr1_2:45639463-45639482 None:intergenic 35.0%
!!! GTTTTTTGTGGACATTGTCA+TGG + chr1_2:45639558-45639577 None:intergenic 35.0%
! ACAAGGAGAATGATGGTTTT+TGG + chr1_2:45639649-45639668 None:intergenic 35.0%
GATGATAACAAGGAGAATGA+TGG + chr1_2:45639656-45639675 None:intergenic 35.0%
TCATCAAACTCTAACCGTTA+TGG - chr1_2:45639677-45639696 Msa0072590:three_prime_UTR 35.0%
TATCTGTTCCAGAACCATAA+CGG + chr1_2:45639694-45639713 None:intergenic 35.0%
!! GTTCTGGAACAGATAGAATT+TGG - chr1_2:45639699-45639718 Msa0072590:three_prime_UTR 35.0%
!! ACCTAGTTGGAAACTTGTTT+TGG - chr1_2:45639826-45639845 Msa0072590:three_prime_UTR 35.0%
!!! CTTGTTTTGGCTACAGTTAT+TGG - chr1_2:45639839-45639858 Msa0072590:three_prime_UTR 35.0%
CCAAGAAGAAGATTAAGCAT+AGG + chr1_2:45639923-45639942 None:intergenic 35.0%
CCTATGCTTAATCTTCTTCT+TGG - chr1_2:45639920-45639939 Msa0072590:CDS 35.0%
AAATCGAACTCGGTATTTCA+GGG - chr1_2:45640004-45640023 Msa0072590:intron 35.0%
AATTAGTCACACTGATACCA+TGG + chr1_2:45640057-45640076 None:intergenic 35.0%
TGTGTGAATGTTGTAAATCC+TGG + chr1_2:45640102-45640121 None:intergenic 35.0%
CTTCTAATCAGAATCGAACT+CGG - chr1_2:45640207-45640226 Msa0072590:intron 35.0%
! AATATTGGCACCTCTTTTGT+TGG + chr1_2:45640435-45640454 None:intergenic 35.0%
!!! TCAGTGTTGTTTTCCCTTTT+TGG - chr1_2:45640520-45640539 Msa0072590:intron 35.0%
TTTGTGCAGGAACTTCTTTA+AGG - chr1_2:45640669-45640688 Msa0072590:intron 35.0%
TCAAAGGAATTGATATGTGG+AGG - chr1_2:45640699-45640718 Msa0072590:intron 35.0%
CAAAGGAATTGATATGTGGA+GGG - chr1_2:45640700-45640719 Msa0072590:intron 35.0%
!! GAAACAGAGAATTTGCTGAA+AGG + chr1_2:45641167-45641186 None:intergenic 35.0%
TTCTCTGTTTCAACCTTAGA+TGG - chr1_2:45641176-45641195 Msa0072590:intron 35.0%
CTAAAATCCTCTTCCATCTA+AGG + chr1_2:45641192-45641211 None:intergenic 35.0%
!! GAAGAGGATTTTAGTGCTTT+TGG - chr1_2:45641198-45641217 Msa0072590:intron 35.0%
! CCTTGATGATTTGAATAAGG+AGG + chr1_2:45641240-45641259 None:intergenic 35.0%
CCTCCTTATTCAAATCATCA+AGG - chr1_2:45641237-45641256 Msa0072590:intron 35.0%
CATCAAAAACCTTGATGTGA+CGG - chr1_2:45641487-45641506 Msa0072590:intron 35.0%
AAAGGTTTATGACCACAGTT+TGG + chr1_2:45641514-45641533 None:intergenic 35.0%
ACAGAAAATGGACATGTGTA+TGG + chr1_2:45641581-45641600 None:intergenic 35.0%
CCAAACACCAAAAATGCAAT+TGG + chr1_2:45641612-45641631 None:intergenic 35.0%
!!! CCAATTGCATTTTTGGTGTT+TGG - chr1_2:45641609-45641628 Msa0072590:intron 35.0%
TGTACAAAGATCACAGAATG+AGG - chr1_2:45641649-45641668 Msa0072590:intron 35.0%
AAAGATCACAGAATGAGGAT+GGG - chr1_2:45641654-45641673 Msa0072590:intron 35.0%
ATGCCTCACATATGTATTCT+AGG + chr1_2:45641689-45641708 None:intergenic 35.0%
! TATGTGAGGCATCAATAGAA+TGG - chr1_2:45641697-45641716 Msa0072590:CDS 35.0%
ACTCATTGCACAAAATGCAA+GGG + chr1_2:45641733-45641752 None:intergenic 35.0%
!! TTCTGGAGGTGGATTTATTT+TGG - chr1_2:45641788-45641807 Msa0072590:intron 35.0%
!! TCTGGAGGTGGATTTATTTT+GGG - chr1_2:45641789-45641808 Msa0072590:intron 35.0%
TGCTTACCAATGTTGTTGAT+CGG - chr1_2:45641875-45641894 Msa0072590:CDS 35.0%
CGATTTAGTGTGTAGTGTAA+TGG + chr1_2:45641929-45641948 None:intergenic 35.0%
! CGATTCACAATTGATAACAC+TGG + chr1_2:45641976-45641995 None:intergenic 35.0%
GCTGGTCAACACAATTAAAA+GGG + chr1_2:45642082-45642101 None:intergenic 35.0%
TGCTGGTCAACACAATTAAA+AGG + chr1_2:45642083-45642102 None:intergenic 35.0%
ATCACATTGTAGCTATAGTG+TGG + chr1_2:45642172-45642191 None:intergenic 35.0%
GAAGATTACCATAAGGCATA+GGG + chr1_2:45642433-45642452 None:intergenic 35.0%
TGAAGATTACCATAAGGCAT+AGG + chr1_2:45642434-45642453 None:intergenic 35.0%
TCAACTCTTCAAAGCTTAAC+TGG - chr1_2:45642454-45642473 Msa0072590:intron 35.0%
AATTAGTTGCATTTCTTGGG+AGG - chr1_2:45642614-45642633 Msa0072590:intron 35.0%
ATTAGTTGCATTTCTTGGGA+GGG - chr1_2:45642615-45642634 Msa0072590:intron 35.0%
TAGGTTTCCATTATTACCCA+TGG + chr1_2:45642692-45642711 None:intergenic 35.0%
ATACACAACCATGAGTTCAT+GGG - chr1_2:45642820-45642839 Msa0072590:CDS 35.0%
AATCAAGGGTTCATAGATGT+TGG - chr1_2:45642907-45642926 Msa0072590:CDS 35.0%
TTAATGTCTGTTGACCAACA+TGG - chr1_2:45642930-45642949 Msa0072590:CDS 35.0%
!!! TAGTGGTTACGTTAGTTTTC+AGG - chr1_2:45643002-45643021 Msa0072590:intron 35.0%
TATATCTACCTAGCTACTTG+GGG - chr1_2:45643058-45643077 Msa0072590:CDS 35.0%
!! TTGCTTTCTTTTGTTGGTTG+TGG - chr1_2:45643213-45643232 Msa0072590:exon 35.0%
! GTGTTTGGTTTATGCAGTGA+TGG + chr1_2:45639483-45639502 None:intergenic 40.0%
AACTCTAACCGTTATGGTTC+TGG - chr1_2:45639683-45639702 Msa0072590:three_prime_UTR 40.0%
GCCAAAACAAGTTTCCAACT+AGG + chr1_2:45639830-45639849 None:intergenic 40.0%
!!! GGTTTTTTTGGATCAGCATG+TGG - chr1_2:45639860-45639879 Msa0072590:three_prime_UTR 40.0%
GAAATCGAACTCGGTATTTC+AGG - chr1_2:45640003-45640022 Msa0072590:intron 40.0%
ACACTGATACCATGGAGTAT+CGG + chr1_2:45640049-45640068 None:intergenic 40.0%
TCACACAAACTGACCTTTCA+TGG - chr1_2:45640115-45640134 Msa0072590:CDS 40.0%
GGAATCAAACTCGGTATTCT+AGG - chr1_2:45640159-45640178 Msa0072590:CDS 40.0%
TTTCAGCCAATGCTTATGCT+TGG - chr1_2:45640477-45640496 Msa0072590:intron 40.0%
TTCAGCCAATGCTTATGCTT+GGG - chr1_2:45640478-45640497 Msa0072590:intron 40.0%
GTTATCCCAAGCATAAGCAT+TGG + chr1_2:45640486-45640505 None:intergenic 40.0%
CTTATGCTTGGGATAACTGT+TGG - chr1_2:45640489-45640508 Msa0072590:intron 40.0%
GGACAGTGATAAGCCAAAAA+GGG + chr1_2:45640536-45640555 None:intergenic 40.0%
AGGACAGTGATAAGCCAAAA+AGG + chr1_2:45640537-45640556 None:intergenic 40.0%
AACTGCTAAGCAAGCTACTT+TGG - chr1_2:45640883-45640902 Msa0072590:intron 40.0%
GTTTCAACCTTAGATGGAAG+AGG - chr1_2:45641182-45641201 Msa0072590:intron 40.0%
!! TTTTAGTGCTTTTGGCTGTG+TGG - chr1_2:45641206-45641225 Msa0072590:intron 40.0%
ACAGAGCTCTTATAGTGAGA+GGG + chr1_2:45641270-45641289 None:intergenic 40.0%
AACAGAGCTCTTATAGTGAG+AGG + chr1_2:45641271-45641290 None:intergenic 40.0%
CAAAGATCACAGAATGAGGA+TGG - chr1_2:45641653-45641672 Msa0072590:intron 40.0%
GAGCCTAGAATACATATGTG+AGG - chr1_2:45641683-45641702 Msa0072590:intron 40.0%
CACTCATTGCACAAAATGCA+AGG + chr1_2:45641734-45641753 None:intergenic 40.0%
! CTTGCATTTTGTGCAATGAG+TGG - chr1_2:45641732-45641751 Msa0072590:intron 40.0%
TGTGCAATGAGTGGTATTGT+AGG - chr1_2:45641741-45641760 Msa0072590:intron 40.0%
GGTATTGTAGGTGGAATTGT+TGG - chr1_2:45641753-45641772 Msa0072590:intron 40.0%
ATTGTAGGTGGAATTGTTGG+AGG - chr1_2:45641756-45641775 Msa0072590:intron 40.0%
!!! CTGGAGGTGGATTTATTTTG+GGG - chr1_2:45641790-45641809 Msa0072590:intron 40.0%
GGAACATATAGTGTACCTGA+GGG + chr1_2:45641842-45641861 None:intergenic 40.0%
TGCTATCCGATCAACAACAT+TGG + chr1_2:45641884-45641903 None:intergenic 40.0%
TGATCGGATAGCAACAATAG+TGG - chr1_2:45641891-45641910 Msa0072590:intron 40.0%
AACACTGGTCAACACAATTG+CGG + chr1_2:45641961-45641980 None:intergenic 40.0%
ACATTGTAGCTATAGTGTGG+CGG + chr1_2:45642169-45642188 None:intergenic 40.0%
CAGCTTCTATTTGACAACAC+CGG - chr1_2:45642274-45642293 Msa0072590:CDS 40.0%
GTCATTGTATTCATCCTCTC+TGG - chr1_2:45642643-45642662 Msa0072590:intron 40.0%
TGGCAAAAATAACACCAGAG+AGG + chr1_2:45642660-45642679 None:intergenic 40.0%
GATACACAACCATGAGTTCA+TGG - chr1_2:45642819-45642838 Msa0072590:CDS 40.0%
CATGAGTTCATGGGATTCTT+GGG - chr1_2:45642829-45642848 Msa0072590:CDS 40.0%
ATATCTACCTAGCTACTTGG+GGG - chr1_2:45643059-45643078 Msa0072590:CDS 40.0%
ATAAATTCCCCCAAGTAGCT+AGG + chr1_2:45643069-45643088 None:intergenic 40.0%
!! CTTTTGTTGGTTGTGGAGTT+CGG - chr1_2:45643220-45643239 Msa0072590:exon 40.0%
TGCAGGAATTGGAACCTAGT+TGG - chr1_2:45639813-45639832 Msa0072590:three_prime_UTR 45.0%
AGAAAGAGCAGCAGCAGATT+TGG + chr1_2:45639954-45639973 None:intergenic 45.0%
AGAATCGAACTCGGTACTCT+AGG - chr1_2:45640216-45640235 Msa0072590:intron 45.0%
GAATCGAACTCGGTACTCTA+GGG - chr1_2:45640217-45640236 Msa0072590:intron 45.0%
AGTGGCACATCCAACAAAAG+AGG - chr1_2:45640422-45640441 Msa0072590:intron 45.0%
CGACTAGAACTGCAAATCTC+AGG + chr1_2:45641022-45641041 None:intergenic 45.0%
! TGGTTTGCAGACTGATGTAG+AGG - chr1_2:45641341-45641360 Msa0072590:intron 45.0%
! GTATGGTATTGGGTGCTCTT+CGG - chr1_2:45641372-45641391 Msa0072590:intron 45.0%
GCAATGAGTGGTATTGTAGG+TGG - chr1_2:45641744-45641763 Msa0072590:intron 45.0%
GGAATTGTTGGAGGCTTACT+TGG - chr1_2:45641765-45641784 Msa0072590:intron 45.0%
ACACCTATCTCAAGGAGAAG+AGG + chr1_2:45641816-45641835 None:intergenic 45.0%
GGGAACATATAGTGTACCTG+AGG + chr1_2:45641843-45641862 None:intergenic 45.0%
CTTCTATTTGACAACACCGG+TGG - chr1_2:45642277-45642296 Msa0072590:CDS 45.0%
AAGAGGTTCCCTATGCCTTA+TGG - chr1_2:45642422-45642441 Msa0072590:intron 45.0%
CCAAAACAGACACTGTGATG+AGG + chr1_2:45642564-45642583 None:intergenic 45.0%
! CCTCATCACAGTGTCTGTTT+TGG - chr1_2:45642561-45642580 Msa0072590:intron 45.0%
!!! ATCACAGTGTCTGTTTTGGC+TGG - chr1_2:45642565-45642584 Msa0072590:intron 45.0%
GCTCTCACCATGGGTAATAA+TGG - chr1_2:45642682-45642701 Msa0072590:intron 45.0%
CCAAGAATCCCATGAACTCA+TGG + chr1_2:45642831-45642850 None:intergenic 45.0%
CCATGAGTTCATGGGATTCT+TGG - chr1_2:45642828-45642847 Msa0072590:CDS 45.0%
TGTGCGTGTGTGTGTGTGTT+TGG + chr1_2:45639498-45639517 None:intergenic 50.0%
GGATCAGCATGTGGAACTGT+TGG - chr1_2:45639869-45639888 Msa0072590:three_prime_UTR 50.0%
TCAGCATGTGGAACTGTTGG+TGG - chr1_2:45639872-45639891 Msa0072590:three_prime_UTR 50.0%
!! TGTGGAACTGTTGGTGGTGT+TGG - chr1_2:45639878-45639897 Msa0072590:three_prime_UTR 50.0%
TCACACACACCGATACTCCA+TGG - chr1_2:45640037-45640056 Msa0072590:intron 50.0%
GGGCATCAGCATCATCAGTT+TGG - chr1_2:45640388-45640407 Msa0072590:CDS 50.0%
GAGGGTAGAGACTCTTCTCA+AGG - chr1_2:45640718-45640737 Msa0072590:intron 50.0%
ATGTAGAGGCCTGCAGTGTA+TGG - chr1_2:45641355-45641374 Msa0072590:intron 50.0%
AGGCCTGCAGTGTATGGTAT+TGG - chr1_2:45641361-45641380 Msa0072590:intron 50.0%
GGCCTGCAGTGTATGGTATT+GGG - chr1_2:45641362-45641381 Msa0072590:intron 50.0%
CACCCAATACCATACACTGC+AGG + chr1_2:45641367-45641386 None:intergenic 50.0%
CAGTTTGGACCGTCACATCA+AGG + chr1_2:45641499-45641518 None:intergenic 50.0%
TGATGTGACGGTCCAAACTG+TGG - chr1_2:45641499-45641518 Msa0072590:intron 50.0%
ACAGAATGAGGATGGGCACA+GGG - chr1_2:45641661-45641680 Msa0072590:intron 50.0%
GTTGGAGGCTTACTTGGTTC+TGG - chr1_2:45641771-45641790 Msa0072590:intron 50.0%
GAGGGATGACACCTATCTCA+AGG + chr1_2:45641824-45641843 None:intergenic 50.0%
! TGAGATAGGTGTCATCCCTC+AGG - chr1_2:45641824-45641843 Msa0072590:intron 50.0%
!!! TGTCTGTTTTGGCTGGCTTC+TGG - chr1_2:45642572-45642591 Msa0072590:intron 50.0%
!!! GTCTGTTTTGGCTGGCTTCT+GGG - chr1_2:45642573-45642592 Msa0072590:intron 50.0%
!!! TCTGTTTTGGCTGGCTTCTG+GGG - chr1_2:45642574-45642593 Msa0072590:intron 50.0%
! TTTTGCCAGTGCTCTCACCA+TGG - chr1_2:45642672-45642691 Msa0072590:intron 50.0%
TTTGCCAGTGCTCTCACCAT+GGG - chr1_2:45642673-45642692 Msa0072590:intron 50.0%
! ATTACCCATGGTGAGAGCAC+TGG + chr1_2:45642680-45642699 None:intergenic 50.0%
CGCAGAGAGAGTAGCAAGAC+AGG + chr1_2:45639606-45639625 None:intergenic 55.0%
!! GGAACTGTTGGTGGTGTTGG+TGG - chr1_2:45639881-45639900 Msa0072590:three_prime_UTR 55.0%
!! ACTGTTGGTGGTGTTGGTGG+TGG - chr1_2:45639884-45639903 Msa0072590:three_prime_UTR 55.0%
GGAATCGAACTCGGTACTCC+AGG - chr1_2:45640081-45640100 Msa0072590:intron 55.0%
CACAGAATGAGGATGGGCAC+AGG - chr1_2:45641660-45641679 Msa0072590:intron 55.0%
!! GGAGGCTTACTTGGTTCTGG+AGG - chr1_2:45641774-45641793 Msa0072590:intron 55.0%
!! GGCTTACTTGGTTCTGGAGG+TGG - chr1_2:45641777-45641796 Msa0072590:intron 55.0%
GGGCCTCTTCTCCTTGAGAT+AGG - chr1_2:45641810-45641829 Msa0072590:intron 55.0%
GCAATAGCGTCACAGCGCAA+TGG + chr1_2:45642247-45642266 None:intergenic 55.0%
!! GTTGGTGGTGTTGGTGGTGG+TGG - chr1_2:45639887-45639906 Msa0072590:three_prime_UTR 60.0%
! TTGGGTGCTCTTCGGCTTGC+AGG - chr1_2:45641380-45641399 Msa0072590:CDS 60.0%
Chromosome Type Strat End Strand Name
chr1_2 gene 45639425 45643353 45639425 ID=Msa0072590;Name=Msa0072590
chr1_2 mRNA 45639425 45643353 45639425 ID=Msa0072590-mRNA-1;Parent=Msa0072590;Name=Msa0072590-mRNA-1;_AED=0.17;_eAED=0.17;_QI=132|1|1|1|1|1|12|486|464
chr1_2 exon 45639425 45639990 45639425 ID=Msa0072590-mRNA-1:exon:13821;Parent=Msa0072590-mRNA-1
chr1_2 exon 45640084 45640224 45640084 ID=Msa0072590-mRNA-1:exon:13820;Parent=Msa0072590-mRNA-1
chr1_2 exon 45640335 45640428 45640335 ID=Msa0072590-mRNA-1:exon:13819;Parent=Msa0072590-mRNA-1
chr1_2 exon 45640933 45641172 45640933 ID=Msa0072590-mRNA-1:exon:13818;Parent=Msa0072590-mRNA-1
chr1_2 exon 45641377 45641427 45641377 ID=Msa0072590-mRNA-1:exon:13817;Parent=Msa0072590-mRNA-1
chr1_2 exon 45641520 45641606 45641520 ID=Msa0072590-mRNA-1:exon:13816;Parent=Msa0072590-mRNA-1
chr1_2 exon 45641690 45641745 45641690 ID=Msa0072590-mRNA-1:exon:13815;Parent=Msa0072590-mRNA-1
chr1_2 exon 45641846 45641900 45641846 ID=Msa0072590-mRNA-1:exon:13814;Parent=Msa0072590-mRNA-1
chr1_2 exon 45642039 45642100 45642039 ID=Msa0072590-mRNA-1:exon:13813;Parent=Msa0072590-mRNA-1
chr1_2 exon 45642202 45642402 45642202 ID=Msa0072590-mRNA-1:exon:13812;Parent=Msa0072590-mRNA-1
chr1_2 exon 45642801 45642960 45642801 ID=Msa0072590-mRNA-1:exon:13811;Parent=Msa0072590-mRNA-1
chr1_2 exon 45643054 45643353 45643054 ID=Msa0072590-mRNA-1:exon:13810;Parent=Msa0072590-mRNA-1
chr1_2 five_prime_UTR 45643222 45643353 45643222 ID=Msa0072590-mRNA-1:five_prime_utr;Parent=Msa0072590-mRNA-1
chr1_2 CDS 45643054 45643221 45643054 ID=Msa0072590-mRNA-1:cds;Parent=Msa0072590-mRNA-1
chr1_2 CDS 45642801 45642960 45642801 ID=Msa0072590-mRNA-1:cds;Parent=Msa0072590-mRNA-1
chr1_2 CDS 45642202 45642402 45642202 ID=Msa0072590-mRNA-1:cds;Parent=Msa0072590-mRNA-1
chr1_2 CDS 45642039 45642100 45642039 ID=Msa0072590-mRNA-1:cds;Parent=Msa0072590-mRNA-1
chr1_2 CDS 45641846 45641900 45641846 ID=Msa0072590-mRNA-1:cds;Parent=Msa0072590-mRNA-1
chr1_2 CDS 45641690 45641745 45641690 ID=Msa0072590-mRNA-1:cds;Parent=Msa0072590-mRNA-1
chr1_2 CDS 45641520 45641606 45641520 ID=Msa0072590-mRNA-1:cds;Parent=Msa0072590-mRNA-1
chr1_2 CDS 45641377 45641427 45641377 ID=Msa0072590-mRNA-1:cds;Parent=Msa0072590-mRNA-1
chr1_2 CDS 45640933 45641172 45640933 ID=Msa0072590-mRNA-1:cds;Parent=Msa0072590-mRNA-1
chr1_2 CDS 45640335 45640428 45640335 ID=Msa0072590-mRNA-1:cds;Parent=Msa0072590-mRNA-1
chr1_2 CDS 45640084 45640224 45640084 ID=Msa0072590-mRNA-1:cds;Parent=Msa0072590-mRNA-1
chr1_2 CDS 45639911 45639990 45639911 ID=Msa0072590-mRNA-1:cds;Parent=Msa0072590-mRNA-1
chr1_2 three_prime_UTR 45639425 45639910 45639425 ID=Msa0072590-mRNA-1:three_prime_utr;Parent=Msa0072590-mRNA-1
Gene Sequence

>Msa0072590

ATGACAATGTCCACAAAAAACTTCATAGTTTATCTAGTATCATGTTCCTGTCTTGCTACTCTCTCTGCGTTATTTCTCATCCATAACAACCAAAAACCATCATTCTCCTTGTTATCATCATCATCAAACTCTAACCGTTATGGTTCTGGAACAGATAGAATTTGGCCTGAATTGGAACCTAGTTGGAAACTTGTTTTGGCTACAGTTATTGGTTTTTTTGGATCAGCATGTGGAACTGTTGGTGGTGTTGGTGGTGGTGGCATTTTTGTTCCTATGCTTAATCTTCTTCTTGGTTTTGATACCAAATCTGCTGCTGCTCTTTCTAAATGTATGATAATGGGGGCATCAGCATCATCAGTTTGGTATAATTTGAGAGTGGCACATCCAACAAAAGAGGTGCCAATATTAGACTATGATTTAGCTCTTTTGTTTCAGCCAATGCTTATGCTTGGGATAACTGTTGGTGTTACTCTCAGTGTTGTTTTCCCTTTTTGGCTTATCACTGTCCTCATTATCATTCTCTTCATAGGAACTTCTTTAAGGTCATTCTTCAAAGGAATTGATATGTGGAGGGTAGAGACTCTTCTCAAGAATGAAACTGCTAAGCAAGCTACTTTGGTTAATTCTAATGGAGAATTTAAAGCAGTTCTAGTCGACACGAAGCTTGAGCCATTGATCCCTAAAGAAAAGAAGTCAACTATGCAAATTCTCTGTTTCAACCTTAGATGGAAGAGGATTTTAGTGCTTTTGGCTGTGTGGTTTTCTTTCCTCCTTATTCAAATCATCAAGACTGATGTAGAGGCCTGCAGTGTATGGTATTGGGTGCTCTTCGGCTTGCAGTTTCCAATTGCATTTTTGGTGTTTGGCTTTGAAGCAGTCAAGTTGTACAAAGATCACAGAATGAGGATGGGCACAGGGAGCCTAGAATACATATGTGAGGCATCAATAGAATGGAGTGCTACGTCCCTTGCATTTTGTGCAATGAGTGGTATTGTAGGTGGAATTGTTGGAGGCTTACTTGGTTCTGGAGGTGGATTTATTTTGGGGCCTCTTCTCCTTGAGATAGGTGTCATCCCTCAGGTTGCTAGTGCAACAGCAACATTTGTGATGATGTTTTCATCATCTTTGTCTGTTTTTGAATTCTACATTCTCAAGAGGTTCCCTATGCCTTATGCATTATACCTCATCACAGTGTCTGTTTTGGCTGGCTTCTGGGGACAGTTCTTTGTTAGAAAATTAGTTGCATTTCTTGGGAGGGCATCAGTCATTGTATTCATCCTCTCTGGTGTTATTTTTGCCAGTGCTCTCACCATGGGTATTGTTGGCACTGAGAAGAGTATTGAAATGATACACAACCATGAGTTCATGGGATTCTTGGGATTTTGTAGCACTTAA

Protein sequence

>Msa0072590

MTMSTKNFIVYLVSCSCLATLSALFLIHNNQKPSFSLLSSSSNSNRYGSGTDRIWPELEPSWKLVLATVIGFFGSACGTVGGVGGGGIFVPMLNLLLGFDTKSAAALSKCMIMGASASSVWYNLRVAHPTKEVPILDYDLALLFQPMLMLGITVGVTLSVVFPFWLITVLIIILFIGTSLRSFFKGIDMWRVETLLKNETAKQATLVNSNGEFKAVLVDTKLEPLIPKEKKSTMQILCFNLRWKRILVLLAVWFSFLLIQIIKTDVEACSVWYWVLFGLQFPIAFLVFGFEAVKLYKDHRMRMGTGSLEYICEASIEWSATSLAFCAMSGIVGGIVGGLLGSGGGFILGPLLLEIGVIPQVASATATFVMMFSSSLSVFEFYILKRFPMPYALYLITVSVLAGFWGQFFVRKLVAFLGRASVIVFILSGVIFASALTMGIVGTEKSIEMIHNHEFMGFLGFCST*