AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0253290


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0253290 MtrunA17_Chr2g0312581 94.454 559 7 1 1 535 1 559 0.0 1087
Msa0253290 MtrunA17_Chr2g0293981 35.657 502 270 7 6 469 153 639 3.26e-99 315
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0253290 AT1G79030.1 66.014 562 159 7 3 534 1 560 0.0 689
Msa0253290 AT1G16680.1 64.937 559 163 6 3 534 1 553 0.0 677
Msa0253290 AT1G79030.2 69.321 427 99 7 138 534 1 425 0.0 562
Msa0253290 AT5G49580.3 35.741 526 254 11 30 506 175 665 3.23e-98 312
Msa0253290 AT5G49580.1 35.741 526 254 11 30 506 175 665 3.23e-98 312
Msa0253290 AT5G49580.2 35.556 405 212 7 30 417 175 547 1.81e-75 249

Find 189 sgRNAs with CRISPR-Local

Find 427 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CAAAAGGGTCATTGGATTTA+TGG 0.133402 2_2:+44981195 Msa0253290:five_prime_UTR
TGAAAGAAATGCAAGGTTTA+TGG 0.156009 2_2:-44983923 None:intergenic
TGTATCTCTGTTCTTATATT+AGG 0.158216 2_2:+44986673 Msa0253290:three_prime_UTR
GTGAACTGCTGTGGGATTTC+TGG 0.175841 2_2:-44984983 None:intergenic
ATGCAGGGGTTGCTCGAAAT+TGG 0.197102 2_2:+44981459 Msa0253290:CDS
CCACCAAGCGTGCACGATTT+AGG 0.201936 2_2:-44983831 None:intergenic
TGATAAGCAGAAAGAAATTT+TGG 0.214983 2_2:+44984146 Msa0253290:CDS
GCACGCTTGGTGGTATTAAT+TGG 0.222439 2_2:+44983841 Msa0253290:CDS
TCCGATTGCTTCTGCTCTTC+AGG 0.238239 2_2:-44984003 None:intergenic
ATTTATCCTAAACGGGTAAA+AGG 0.242249 2_2:+44980762 Msa0253290:five_prime_UTR
AGATGGATGGGTTGAATATA+AGG 0.245664 2_2:+44985483 Msa0253290:CDS
TGATCTCAGTAATCCATTTC+GGG 0.248137 2_2:-44986418 None:intergenic
TGGGAATCTACTTGAGTTAC+AGG 0.274469 2_2:-44986138 None:intergenic
TGAAATGTGGTAAAGAAAAT+TGG 0.282168 2_2:-44986521 None:intergenic
TTGATCTCAGTAATCCATTT+CGG 0.284846 2_2:-44986419 None:intergenic
ATTGAAAGAGGGTATGAAAT+TGG 0.285370 2_2:-44980659 None:intergenic
GTTACTCACATTGATCATTA+AGG 0.285679 2_2:+44986603 Msa0253290:three_prime_UTR
GGTTTACGTGCTTGTTAGTA+TGG 0.289745 2_2:+44981621 Msa0253290:CDS
ATGAAGAAGAATATTGGATT+TGG 0.289824 2_2:-44980561 None:intergenic
GGTTGAATATAAGGGATCTT+TGG 0.299665 2_2:+44985492 Msa0253290:CDS
CACCAAGCGTGCACGATTTA+GGG 0.301147 2_2:-44983830 None:intergenic
TAGGGTTGTTCAATCAAGTT+TGG 0.309311 2_2:+44981332 Msa0253290:CDS
AAGTAGATTCCCATGGGATT+TGG 0.312431 2_2:+44986148 Msa0253290:CDS
TGGGGTTGCTGTCCAATACT+TGG 0.313236 2_2:+44982300 Msa0253290:CDS
TTTCAGTCTTTCATTAAGTT+TGG 0.319308 2_2:+44981535 Msa0253290:CDS
TGGCATACATCCACAAAATA+AGG 0.320756 2_2:-44982363 None:intergenic
AAAGAGAGAAAGAGGCAAAA+TGG 0.341092 2_2:-44981022 None:intergenic
GATTCCACTTGCAAACTTGA+TGG 0.342424 2_2:-44981283 None:intergenic
AGTGCGGTAATTCACATGTT+TGG 0.344384 2_2:+44985279 Msa0253290:CDS
GGTGACAGCAGGTGGTTTAC+TGG 0.344960 2_2:-44984112 None:intergenic
TGCAGGGGTTGCTCGAAATT+GGG 0.345633 2_2:+44981460 Msa0253290:CDS
GATCAAGGTTATTTATTTGA+TGG 0.350421 2_2:+44981149 Msa0253290:five_prime_UTR
TTGAAGTGATTTATCCTAAA+CGG 0.353634 2_2:+44980754 Msa0253290:five_prime_UTR
AAGAGAATGAAGAAGAATAT+TGG 0.355344 2_2:-44980567 None:intergenic
AGGATAAATCACTTCAATAA+AGG 0.355742 2_2:-44980748 None:intergenic
AAGCTCGGTCGGTGGGTGTT+AGG 0.357074 2_2:-44986080 None:intergenic
GTGAAATTTGTTGTAGATCA+AGG 0.358558 2_2:+44981134 Msa0253290:five_prime_UTR
GAAGATCAAGATTGAAACTT+TGG 0.363008 2_2:-44980631 None:intergenic
ATTTGACCTGTGGCTTCAAC+AGG 0.368409 2_2:+44986205 Msa0253290:CDS
AGGGTTGTTCAATCAAGTTT+GGG 0.374931 2_2:+44981333 Msa0253290:CDS
TTTACTCCATCCAATCCCTT+TGG 0.376262 2_2:-44986379 None:intergenic
CTTCAACAGGCTTTAGCATC+TGG 0.376602 2_2:+44986218 Msa0253290:CDS
GTCTTCATCCATCATCATTT+CGG 0.377560 2_2:-44986174 None:intergenic
TTACTCCATCCAATCCCTTT+GGG 0.377996 2_2:-44986378 None:intergenic
GTGCGGTAATTCACATGTTT+GGG 0.380056 2_2:+44985280 Msa0253290:CDS
CAATACTTGGGTTATACTCC+TGG 0.380895 2_2:+44982313 Msa0253290:CDS
TAGCATCACAAAAGGGTCAT+TGG 0.382212 2_2:+44981187 Msa0253290:five_prime_UTR
TGAATGTTTCAGGTTACTGC+TGG 0.391743 2_2:+44982280 Msa0253290:intron
TCATGCAGGGAATGGCTTGT+AGG 0.396238 2_2:+44986057 Msa0253290:intron
TCATGGTGATGGAGGATATA+GGG 0.396369 2_2:+44981314 Msa0253290:exon
AAACGACTCATGCTCAGTTC+TGG 0.396384 2_2:-44986629 None:intergenic
TGAAGTGATTTATCCTAAAC+GGG 0.401435 2_2:+44980755 Msa0253290:five_prime_UTR
TTCAAATTGCCTCAAAAGAA+AGG 0.403167 2_2:+44986284 Msa0253290:CDS
TGGTTACTAAGGATTTCTTT+TGG 0.404085 2_2:+44986720 Msa0253290:three_prime_UTR
AGAAATGAAGAATGAGGAAA+AGG 0.404570 2_2:-44980605 None:intergenic
GGCATTGGCCGATGGTATGC+AGG 0.413497 2_2:+44981443 Msa0253290:CDS
TTTGTTTAAGAAACCCGAAA+TGG 0.414667 2_2:+44986405 Msa0253290:three_prime_UTR
GTCTTGCTGAAAAGCTCAAT+AGG 0.415248 2_2:+44986328 Msa0253290:exon
ATCAAGTTTGGGGATGGCTT+CGG 0.416194 2_2:+44981344 Msa0253290:CDS
CCTAAATCGTGCACGCTTGG+TGG 0.416344 2_2:+44983831 Msa0253290:CDS
CTTAATCATTATGATGCCCT+TGG 0.419772 2_2:+44984231 Msa0253290:CDS
ATAAGAACAGAGATACAATA+AGG 0.420872 2_2:-44986667 None:intergenic
ATGTTTGGGTATGCACTAAC+AGG 0.421698 2_2:+44985294 Msa0253290:CDS
GATGGATGGGTTGAATATAA+GGG 0.424705 2_2:+44985484 Msa0253290:CDS
CTGTATCCGTCTGGATTCTT+CGG 0.424876 2_2:-44985249 None:intergenic
GACCTGACACCATCTTGCTT+TGG 0.429270 2_2:-44985324 None:intergenic
TGGAAGGACTCTGCTGTAAG+GGG 0.429309 2_2:+44981511 Msa0253290:CDS
GTCATGGTGATGGAGGATAT+AGG 0.429732 2_2:+44981313 Msa0253290:exon
AATTAAAGACTTCAAATTCA+CGG 0.434500 2_2:-44981078 None:intergenic
TTGGAAGGACTCTGCTGTAA+GGG 0.436084 2_2:+44981510 Msa0253290:CDS
AAGTCTTTAATTTATGATGT+TGG 0.437191 2_2:+44981089 Msa0253290:five_prime_UTR
GAAATGAAGAATGAGGAAAA+GGG 0.438569 2_2:-44980604 None:intergenic
TTCCCTAAATCGTGCACGCT+TGG 0.438835 2_2:+44983828 Msa0253290:CDS
GAAACTTCAATGTGCATATG+AGG 0.445625 2_2:+44984738 Msa0253290:CDS
CACAGTTCGAGCACGCCAAC+AGG 0.445831 2_2:-44981380 None:intergenic
AATCCAGAAAAGAGAGAAAG+AGG 0.447894 2_2:-44981030 None:intergenic
TGCAAATTCTCAGATTCAAC+TGG 0.451152 2_2:-44984075 None:intergenic
TTGAATGTGAGAGTATTTAG+TGG 0.453509 2_2:+44980967 Msa0253290:five_prime_UTR
TTTGGAAGGACTCTGCTGTA+AGG 0.454087 2_2:+44981509 Msa0253290:CDS
TTACTGAGATCAAAACTAGA+AGG 0.456205 2_2:+44986429 Msa0253290:three_prime_UTR
CCAAGCCAACCATGTTTACA+TGG 0.459618 2_2:-44986103 None:intergenic
CTTTGTGCACTGTATCCGTC+TGG 0.460373 2_2:-44985258 None:intergenic
GGATTGAACAATGAAAACTT+TGG 0.461683 2_2:-44980540 None:intergenic
TGATGATTTAGCATCACAAA+AGG 0.463802 2_2:+44981179 Msa0253290:five_prime_UTR
TCTGACTTCGATGTATTGCT+TGG 0.466273 2_2:+44981600 Msa0253290:CDS
CCATGTAAACATGGTTGGCT+TGG 0.467923 2_2:+44986103 Msa0253290:CDS
TGAGGAAAAGGGGTTTCAAA+AGG 0.468417 2_2:-44980593 None:intergenic
TTCATTGCCTACATCCCAAA+GGG 0.469914 2_2:+44986364 Msa0253290:three_prime_UTR
ATCAAGGTTATTTATTTGAT+GGG 0.474990 2_2:+44981150 Msa0253290:five_prime_UTR
GAAGCAATCGGAGACAGTTA+TGG 0.475066 2_2:+44984014 Msa0253290:CDS
ATCCCACAGCAGTTCACATC+AGG 0.475853 2_2:+44984989 Msa0253290:CDS
CAGGAGTATAACCCAAGTAT+TGG 0.476147 2_2:-44982312 None:intergenic
TGTTCAATCAAGTTTGGGGA+TGG 0.476331 2_2:+44981338 Msa0253290:CDS
CTGTTGGCGTGCTCGAACTG+TGG 0.477803 2_2:+44981381 Msa0253290:CDS
TGCCTACATCCCAAAGGGAT+TGG 0.478963 2_2:+44986369 Msa0253290:three_prime_UTR
GGCCAAAGCAAGATGGTGTC+AGG 0.480599 2_2:+44985322 Msa0253290:CDS
CGATGTTTATTGAACGGCAT+TGG 0.480918 2_2:+44981428 Msa0253290:CDS
TCAGATTCAACTGGTGGGAT+AGG 0.484618 2_2:-44984066 None:intergenic
GAGAGTATTTAGTGGTATCA+TGG 0.485450 2_2:+44980975 Msa0253290:five_prime_UTR
TCTTGCTGAAAAGCTCAATA+GGG 0.496208 2_2:+44986329 Msa0253290:exon
CCCTAAAATCTGATTGAAAG+AGG 0.500378 2_2:-44980671 None:intergenic
TTGAAAGAGGGTATGAAATT+GGG 0.503015 2_2:-44980658 None:intergenic
CAAGTAAAAGTGGGATGGCT+TGG 0.506505 2_2:+44983889 Msa0253290:CDS
GTAAAGAAAATTGGCAACCT+TGG 0.506912 2_2:-44986512 None:intergenic
ATCCAATCCCTTTGGGATGT+AGG 0.511524 2_2:-44986371 None:intergenic
AGCTTCCATGTAAACATGGT+TGG 0.511891 2_2:+44986098 Msa0253290:CDS
TTAATTTATGATGTTGGAGT+AGG 0.513450 2_2:+44981095 Msa0253290:five_prime_UTR
TCAAATTGCCTCAAAAGAAA+GGG 0.520660 2_2:+44986285 Msa0253290:CDS
TCCTGAAGAGCAGAAGCAAT+CGG 0.523623 2_2:+44984002 Msa0253290:CDS
ACTTCCATCAAGTTTGCAAG+TGG 0.526412 2_2:+44981279 Msa0253290:five_prime_UTR
GAATGTTTCAGGTTACTGCT+GGG 0.526617 2_2:+44982281 Msa0253290:intron
CCTCAAAACGCAGGAAGAGT+TGG 0.527025 2_2:+44986255 Msa0253290:CDS
AATACTTGGGTTATACTCCT+GGG 0.528723 2_2:+44982314 Msa0253290:CDS
TTTATCCTAAACGGGTAAAA+GGG 0.529720 2_2:+44980763 Msa0253290:five_prime_UTR
TATGCCAACTTTCTGATCAC+AGG 0.529729 2_2:+44982379 Msa0253290:CDS
ACAGGATTACTACTCATAGT+TGG 0.530073 2_2:+44982397 Msa0253290:CDS
TACATCCCAAAGGGATTGGA+TGG 0.530497 2_2:+44986373 Msa0253290:three_prime_UTR
ACCATGTTTACATGGAAGCT+CGG 0.530586 2_2:-44986095 None:intergenic
TAATCCTGTGATCAGAAAGT+TGG 0.531592 2_2:-44982383 None:intergenic
CATAACTCTAAAATGAATGC+TGG 0.533736 2_2:-44986809 None:intergenic
GGGGTTGCTGTCCAATACTT+GGG 0.535229 2_2:+44982301 Msa0253290:CDS
TGGAGCAGAAATGAAGAATG+AGG 0.539831 2_2:-44980611 None:intergenic
GTATTCTGTTCAAGTAAAAG+TGG 0.543915 2_2:+44983879 Msa0253290:CDS
GGTCATTGGATTTATGGTGA+TGG 0.544341 2_2:+44981201 Msa0253290:five_prime_UTR
TTTGGACGCCGAAATGATGA+TGG 0.545956 2_2:+44986166 Msa0253290:CDS
TATTGAACGGCATTGGCCGA+TGG 0.550013 2_2:+44981435 Msa0253290:CDS
GAGGAAAAGGGGTTTCAAAA+GGG 0.552128 2_2:-44980592 None:intergenic
AGCAAAGGATGGAGATGGAT+GGG 0.552152 2_2:+44985471 Msa0253290:CDS
ATTAAGAAAAGAAGAATCCA+TGG 0.556650 2_2:+44984947 Msa0253290:CDS
GATGATTTAGCATCACAAAA+GGG 0.556732 2_2:+44981180 Msa0253290:five_prime_UTR
CTAAAGCCTGTTGAAGCCAC+AGG 0.559744 2_2:-44986211 None:intergenic
GCATTGGCCGATGGTATGCA+GGG 0.560371 2_2:+44981444 Msa0253290:CDS
CATAAAATATATGTACACTA+AGG 0.560794 2_2:+44986548 Msa0253290:three_prime_UTR
ATTTCGGCGTCCAAATCCCA+TGG 0.562239 2_2:-44986158 None:intergenic
AAGCAAAGGATGGAGATGGA+TGG 0.562575 2_2:+44985470 Msa0253290:CDS
AAACTGCGATGTTTATTGAA+CGG 0.563453 2_2:+44981422 Msa0253290:CDS
TACATGGAAGCTCGGTCGGT+GGG 0.566355 2_2:-44986087 None:intergenic
GGAAGGACTCTGCTGTAAGG+GGG 0.567571 2_2:+44981512 Msa0253290:CDS
TACCTGATGTGAACTGCTGT+GGG 0.569328 2_2:-44984991 None:intergenic
CCTAAAATCTGATTGAAAGA+GGG 0.569348 2_2:-44980670 None:intergenic
GCAGGGGTTGCTCGAAATTG+GGG 0.573947 2_2:+44981461 Msa0253290:CDS
CAGTTTCATCAAGCAAAGGA+TGG 0.576801 2_2:+44985460 Msa0253290:CDS
ATCTGTAGAGGTCATGGTGA+TGG 0.577651 2_2:+44981303 Msa0253290:exon
AAATGAAGAATGAGGAAAAG+GGG 0.582281 2_2:-44980603 None:intergenic
CATCAAGCAAAGGATGGAGA+TGG 0.583990 2_2:+44985466 Msa0253290:CDS
GGATTACTACTCATAGTTGG+AGG 0.586894 2_2:+44982400 Msa0253290:CDS
TGTCATTTGAAAGAAATGCA+AGG 0.588628 2_2:-44983930 None:intergenic
AAATTCTCAGATTCAACTGG+TGG 0.588839 2_2:-44984072 None:intergenic
CTGTCAGTTTCATCAAGCAA+AGG 0.589407 2_2:+44985456 Msa0253290:CDS
CTGTTCAAGTAAAAGTGGGA+TGG 0.589512 2_2:+44983884 Msa0253290:CDS
TTTGTGGCGGCTAAATCCAA+GGG 0.591814 2_2:-44984247 None:intergenic
GTGGTGAATTATAAGAGCCA+AGG 0.591876 2_2:+44986495 Msa0253290:three_prime_UTR
GAAATGCAAGGTTTATGGCA+AGG 0.596267 2_2:-44983918 None:intergenic
TGTTTACATGGAAGCTCGGT+CGG 0.599305 2_2:-44986091 None:intergenic
ATTCAATTGATGAAATGAGA+AGG 0.599840 2_2:+44984196 Msa0253290:CDS
TGTAGAGGTCATGGTGATGG+AGG 0.601487 2_2:+44981306 Msa0253290:exon
TTACATGGAAGCTCGGTCGG+TGG 0.608397 2_2:-44986088 None:intergenic
TTTGCGAGTCCTCAAAACGC+AGG 0.609028 2_2:+44986246 Msa0253290:CDS
ACGAAGAGGCATTTGACCTG+TGG 0.610097 2_2:+44986195 Msa0253290:CDS
GAGCAACCCCTGCATACCAT+CGG 0.610183 2_2:-44981451 None:intergenic
TTACCTGATGTGAACTGCTG+TGG 0.612719 2_2:-44984992 None:intergenic
TATTCTGTTCAAGTAAAAGT+GGG 0.614296 2_2:+44983880 Msa0253290:CDS
GTAACTCAAGTAGATTCCCA+TGG 0.614310 2_2:+44986141 Msa0253290:CDS
GGAGCAAGGCCAAAGCAAGA+TGG 0.614781 2_2:+44985315 Msa0253290:CDS
AATTCTCAGATTCAACTGGT+GGG 0.617335 2_2:-44984071 None:intergenic
GGGTTGTTCAATCAAGTTTG+GGG 0.617373 2_2:+44981334 Msa0253290:CDS
TTATTAGCATGTATATACAA+AGG 0.617487 2_2:-44986744 None:intergenic
CTGCTTATCAACAACTGATG+TGG 0.617904 2_2:-44984133 None:intergenic
TGAGTAACTCCTATAAACCT+AGG 0.619287 2_2:-44986588 None:intergenic
ACAACTGATGTGGTGACAGC+AGG 0.620614 2_2:-44984123 None:intergenic
ATCTACTTGAGTTACAGGAA+TGG 0.621712 2_2:-44986133 None:intergenic
TTTCATTGCCTACATCCCAA+AGG 0.622491 2_2:+44986363 Msa0253290:three_prime_UTR
TAACTCAAGTAGATTCCCAT+GGG 0.623997 2_2:+44986142 Msa0253290:CDS
CTAAACGGGTAAAAGGGTCA+AGG 0.625600 2_2:+44980769 Msa0253290:five_prime_UTR
AATGTTTCAGGTTACTGCTG+GGG 0.626076 2_2:+44982282 Msa0253290:intron
AGTGGAATCTGTAGAGGTCA+TGG 0.628752 2_2:+44981297 Msa0253290:exon
TTTGCAAGTGGAATCTGTAG+AGG 0.638892 2_2:+44981291 Msa0253290:five_prime_UTR
CGGATACAGTGCACAAAGTG+CGG 0.640827 2_2:+44985263 Msa0253290:CDS
GATGATGGATGAAGACGAAG+AGG 0.646374 2_2:+44986181 Msa0253290:CDS
TTTCGGCGTCCAAATCCCAT+GGG 0.650751 2_2:-44986157 None:intergenic
AACAGAATACATAGCATATG+CGG 0.653102 2_2:-44983866 None:intergenic
TGATGCTCTTGCTTATAATG+TGG 0.655740 2_2:+44981563 Msa0253290:CDS
CATTGGCCGATGGTATGCAG+GGG 0.658782 2_2:+44981445 Msa0253290:CDS
ACCGAGCTTCCATGTAAACA+TGG 0.658792 2_2:+44986094 Msa0253290:CDS
ATCGTTCCGAAGAATCCAGA+CGG 0.659900 2_2:+44985243 Msa0253290:CDS
GGTATGCACTAACAGGAGCA+AGG 0.662253 2_2:+44985301 Msa0253290:CDS
GGTCACGAAAAGATGCCTGT+TGG 0.663139 2_2:+44981365 Msa0253290:CDS
ACTGATGTGGTGACAGCAGG+TGG 0.695798 2_2:-44984120 None:intergenic
GATGAGTCATGAGAGCATTG+TGG 0.727305 2_2:+44986476 Msa0253290:three_prime_UTR

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TTTAAATTATTATATAAATT+AGG - chr2_2:44983701-44983720 None:intergenic 0.0%
!!! TTTTAATGAAAATTCATAAA+TGG - chr2_2:44981721-44981740 None:intergenic 10.0%
!! AAAAAAAAAAAAAACTCATT+CGG + chr2_2:44986775-44986794 Msa0253290:three_prime_UTR 10.0%
!!! TTACATTATCTTTGATTTTT+TGG + chr2_2:44981491-44981510 Msa0253290:CDS 15.0%
!!! ATTTTAAGAAAAAAAGTCAA+AGG - chr2_2:44981857-44981876 None:intergenic 15.0%
!!! ATTATACAAATTTTATGTAG+AGG + chr2_2:44981885-44981904 Msa0253290:intron 15.0%
!! AGGAAAAAAAAAAATCAAAT+AGG - chr2_2:44982976-44982995 None:intergenic 15.0%
!! AAGCATAAAAAATTGAAAAT+GGG - chr2_2:44983028-44983047 None:intergenic 15.0%
!! AAAGCATAAAAAATTGAAAA+TGG - chr2_2:44983029-44983048 None:intergenic 15.0%
!!! TTTTCAATTTTTTATGCTTT+TGG + chr2_2:44983029-44983048 Msa0253290:intron 15.0%
!!! TATTATAAGAACTTTTAACA+AGG - chr2_2:44983508-44983527 None:intergenic 15.0%
!! CTATCTTATAATTGATATAT+TGG + chr2_2:44984788-44984807 Msa0253290:intron 15.0%
!! TCCTTAATATATAATCTATT+AGG + chr2_2:44985086-44985105 Msa0253290:intron 15.0%
!! TCCTAATAGATTATATATTA+AGG - chr2_2:44985090-44985109 None:intergenic 15.0%
!!! TTCAAGTTCATATTTTTGAT+GGG + chr2_2:44980717-44980736 Msa0253290:five_prime_UTR 20.0%
!! AATTAAAGACTTCAAATTCA+CGG - chr2_2:44981081-44981100 None:intergenic 20.0%
!!! AAGTCTTTAATTTATGATGT+TGG + chr2_2:44981089-44981108 Msa0253290:five_prime_UTR 20.0%
!! ATCAAGGTTATTTATTTGAT+GGG + chr2_2:44981150-44981169 Msa0253290:five_prime_UTR 20.0%
!!! ATTATCTTTGATTTTTTGGA+AGG + chr2_2:44981495-44981514 Msa0253290:CDS 20.0%
!!! ATGAATTTTCATTAAAACTG+CGG + chr2_2:44981724-44981743 Msa0253290:intron 20.0%
!!! ACATTTTACAATTACCTTAT+TGG + chr2_2:44981790-44981809 Msa0253290:intron 20.0%
!!! ATGATTTTAATTTATCTCTG+TGG + chr2_2:44982084-44982103 Msa0253290:intron 20.0%
!!! CAATATTTTGAACTCAAATT+AGG - chr2_2:44982163-44982182 None:intergenic 20.0%
!!! AATTTGAGTTCAAAATATTG+TGG + chr2_2:44982163-44982182 Msa0253290:intron 20.0%
!! AACAACATATTTAACACTAA+AGG - chr2_2:44982890-44982909 None:intergenic 20.0%
!! AAAAAGTAAAAATCCTACTT+AGG - chr2_2:44983154-44983173 None:intergenic 20.0%
!! GTTTATATAATGTTCTATGA+CGG + chr2_2:44983428-44983447 Msa0253290:intron 20.0%
!!! TTTTAACAAGGATGAAAAAA+TGG - chr2_2:44983496-44983515 None:intergenic 20.0%
!! AGTTCTTATAATAAAGTCAT+TGG + chr2_2:44983515-44983534 Msa0253290:intron 20.0%
!! GTTCTTATAATAAAGTCATT+GGG + chr2_2:44983516-44983535 Msa0253290:intron 20.0%
!!! NNNNNNNNNGAAAGGCATAT+GGG - chr2_2:44983568-44983587 None:intergenic 20.0%
!!! NNNNNNNNNNGAAAGGCATA+TGG - chr2_2:44983569-44983588 None:intergenic 20.0%
!!! TAATGTTCAAGTTTTTAAGA+AGG - chr2_2:44984552-44984571 None:intergenic 20.0%
!!! TTTTTCTTTAATTGTTCGAA+AGG - chr2_2:44985193-44985212 None:intergenic 20.0%
!! TCGAACAATTAAAGAAAAAA+AGG + chr2_2:44985194-44985213 Msa0253290:intron 20.0%
!! AAATATTTGATGTATCAGAA+TGG + chr2_2:44985653-44985672 Msa0253290:intron 20.0%
!! AATATTTGATGTATCAGAAT+GGG + chr2_2:44985654-44985673 Msa0253290:intron 20.0%
!!! TGATATAGTAGTTTGTTTAT+AGG + chr2_2:44985993-44986012 Msa0253290:intron 20.0%
!!! TATTTTATGGATATGAAATG+TGG - chr2_2:44986537-44986556 None:intergenic 20.0%
!!! CTTAGTGTACATATATTTTA+TGG - chr2_2:44986550-44986569 None:intergenic 20.0%
!! CATAAAATATATGTACACTA+AGG + chr2_2:44986548-44986567 Msa0253290:three_prime_UTR 20.0%
!! TTATTAGCATGTATATACAA+AGG - chr2_2:44986747-44986766 None:intergenic 20.0%
!!! TTGAAAAGTTTTGTAAAGAG+AGG - chr2_2:44980458-44980477 None:intergenic 25.0%
! ATGAAGAAGAATATTGGATT+TGG - chr2_2:44980564-44980583 None:intergenic 25.0%
! AAGAGAATGAAGAAGAATAT+TGG - chr2_2:44980570-44980589 None:intergenic 25.0%
! CATCAAAAATATGAACTTGA+AGG - chr2_2:44980718-44980737 None:intergenic 25.0%
!!! CTTCAAGTTCATATTTTTGA+TGG + chr2_2:44980716-44980735 Msa0253290:five_prime_UTR 25.0%
! AGGATAAATCACTTCAATAA+AGG - chr2_2:44980751-44980770 None:intergenic 25.0%
! TTGAAGTGATTTATCCTAAA+CGG + chr2_2:44980754-44980773 Msa0253290:five_prime_UTR 25.0%
!!! ATAGTGTTAGATTTTTCAGT+AGG + chr2_2:44980795-44980814 Msa0253290:five_prime_UTR 25.0%
!!! TAGTGTTAGATTTTTCAGTA+GGG + chr2_2:44980796-44980815 Msa0253290:five_prime_UTR 25.0%
!! ACATTGTGTTTTGTGAAAAA+GGG + chr2_2:44980847-44980866 Msa0253290:five_prime_UTR 25.0%
!!! CTTTGTGTTGTTTTGTTTTT+AGG + chr2_2:44980881-44980900 Msa0253290:five_prime_UTR 25.0%
!! TTTTAGGCTTTTATGAATAG+TGG + chr2_2:44980897-44980916 Msa0253290:five_prime_UTR 25.0%
! TTAATTTATGATGTTGGAGT+AGG + chr2_2:44981095-44981114 Msa0253290:five_prime_UTR 25.0%
! GATCAAGGTTATTTATTTGA+TGG + chr2_2:44981149-44981168 Msa0253290:five_prime_UTR 25.0%
! TTTCAGTCTTTCATTAAGTT+TGG + chr2_2:44981535-44981554 Msa0253290:CDS 25.0%
! AGTAAGAACAAAAATTCAGA+CGG - chr2_2:44981665-44981684 None:intergenic 25.0%
!! CTGAATTTTTGTTCTTACTT+TGG + chr2_2:44981666-44981685 Msa0253290:intron 25.0%
!!! ATATTCTAGAATGACCAATA+AGG - chr2_2:44981807-44981826 None:intergenic 25.0%
!! TTACTCTCCTAAATTTTGAA+GGG - chr2_2:44981962-44981981 None:intergenic 25.0%
!! ATTACTCTCCTAAATTTTGA+AGG - chr2_2:44981963-44981982 None:intergenic 25.0%
! TTCAAAATTTAGGAGAGTAA+TGG + chr2_2:44981962-44981981 Msa0253290:intron 25.0%
!!! CATTGAGTTCTAATTTTAGT+CGG + chr2_2:44982056-44982075 Msa0253290:intron 25.0%
!!! TTTTTGCTATCCTTATTTTG+TGG + chr2_2:44982353-44982372 Msa0253290:CDS 25.0%
!!! ATGATGCTTTTATTGTTGTT+TGG + chr2_2:44982424-44982443 Msa0253290:intron 25.0%
!!! TGATGCTTTTATTGTTGTTT+GGG + chr2_2:44982425-44982444 Msa0253290:intron 25.0%
! AGTGTATACAATACAAAAGA+CGG - chr2_2:44982511-44982530 None:intergenic 25.0%
! TAAAATCCACAAACTCAAAA+TGG - chr2_2:44982852-44982871 None:intergenic 25.0%
!!! TTTTGAGTTTGTGGATTTTA+AGG + chr2_2:44982852-44982871 Msa0253290:intron 25.0%
! TATTTGTTTGTGTTTGTGTT+TGG + chr2_2:44982943-44982962 Msa0253290:intron 25.0%
! ATTTGTTTGTGTTTGTGTTT+GGG + chr2_2:44982944-44982963 Msa0253290:intron 25.0%
! AATAATCATGCAACAGAAAA+AGG - chr2_2:44982996-44983015 None:intergenic 25.0%
!! TTTTCTGTTGCATGATTATT+TGG + chr2_2:44982996-44983015 Msa0253290:intron 25.0%
! TTTCTGTTGCATGATTATTT+GGG + chr2_2:44982997-44983016 Msa0253290:intron 25.0%
!!! TTCTGATTTGTATTTTAAGC+AGG + chr2_2:44983076-44983095 Msa0253290:intron 25.0%
! AAACAAAATTTCAGGATTGT+AGG - chr2_2:44983781-44983800 None:intergenic 25.0%
! TGATTGACAAACAAAATTTC+AGG - chr2_2:44983789-44983808 None:intergenic 25.0%
! TATTCTGTTCAAGTAAAAGT+GGG + chr2_2:44983880-44983899 Msa0253290:CDS 25.0%
!! TTTTGAATTTTCTGCTTCAA+TGG + chr2_2:44983953-44983972 Msa0253290:CDS 25.0%
!! TGATAAGCAGAAAGAAATTT+TGG + chr2_2:44984146-44984165 Msa0253290:CDS 25.0%
! ATTCAATTGATGAAATGAGA+AGG + chr2_2:44984196-44984215 Msa0253290:CDS 25.0%
!! TAATGATGAATACCTTTTTC+CGG - chr2_2:44984305-44984324 None:intergenic 25.0%
!! ATTTTTGACCTATAGTAATG+TGG + chr2_2:44984404-44984423 Msa0253290:intron 25.0%
!! TGTTATCATTTTCATCATGT+AGG + chr2_2:44984657-44984676 Msa0253290:intron 25.0%
!! AAGTTTCATACTTGTTAAAG+AGG - chr2_2:44984882-44984901 None:intergenic 25.0%
! ATTAAGAAAAGAAGAATCCA+TGG + chr2_2:44984947-44984966 Msa0253290:CDS 25.0%
! TGGAATTTACAAGAATATGT+CGG - chr2_2:44985042-44985061 None:intergenic 25.0%
!! TTCTTTTGCATTGTAATGAA+CGG - chr2_2:44985155-44985174 None:intergenic 25.0%
!! TACTCTACAAGCAATATTTT+TGG + chr2_2:44985695-44985714 Msa0253290:intron 25.0%
!!! TACAAAGTATTGTCAAATAG+CGG + chr2_2:44985829-44985848 Msa0253290:intron 25.0%
! TGAAATGTGGTAAAGAAAAT+TGG - chr2_2:44986524-44986543 None:intergenic 25.0%
! ATAAGAACAGAGATACAATA+AGG - chr2_2:44986670-44986689 None:intergenic 25.0%
! TGTATCTCTGTTCTTATATT+AGG + chr2_2:44986673-44986692 Msa0253290:three_prime_UTR 25.0%
!! TCTTTTCAATATGGTTACTA+AGG + chr2_2:44986709-44986728 Msa0253290:three_prime_UTR 25.0%
GGATTGAACAATGAAAACTT+TGG - chr2_2:44980543-44980562 None:intergenic 30.0%
AAATGAAGAATGAGGAAAAG+GGG - chr2_2:44980606-44980625 None:intergenic 30.0%
GAAATGAAGAATGAGGAAAA+GGG - chr2_2:44980607-44980626 None:intergenic 30.0%
AGAAATGAAGAATGAGGAAA+AGG - chr2_2:44980608-44980627 None:intergenic 30.0%
GAAGATCAAGATTGAAACTT+TGG - chr2_2:44980634-44980653 None:intergenic 30.0%
! TTGAAAGAGGGTATGAAATT+GGG - chr2_2:44980661-44980680 None:intergenic 30.0%
! ATTGAAAGAGGGTATGAAAT+TGG - chr2_2:44980662-44980681 None:intergenic 30.0%
CCTAAAATCTGATTGAAAGA+GGG - chr2_2:44980673-44980692 None:intergenic 30.0%
! CCTCTTTCAATCAGATTTTA+GGG + chr2_2:44980671-44980690 Msa0253290:five_prime_UTR 30.0%
! TTAGGGTTTTTCACTGTAAA+AGG + chr2_2:44980688-44980707 Msa0253290:five_prime_UTR 30.0%
! TAGGGTTTTTCACTGTAAAA+GGG + chr2_2:44980689-44980708 Msa0253290:five_prime_UTR 30.0%
TGAAGTGATTTATCCTAAAC+GGG + chr2_2:44980755-44980774 Msa0253290:five_prime_UTR 30.0%
ATTTATCCTAAACGGGTAAA+AGG + chr2_2:44980762-44980781 Msa0253290:five_prime_UTR 30.0%
TTTATCCTAAACGGGTAAAA+GGG + chr2_2:44980763-44980782 Msa0253290:five_prime_UTR 30.0%
! GACATTGTGTTTTGTGAAAA+AGG + chr2_2:44980846-44980865 Msa0253290:five_prime_UTR 30.0%
!!! ATGAATAGTGGTTGCTTTTT+TGG + chr2_2:44980909-44980928 Msa0253290:five_prime_UTR 30.0%
!!! GCTTTTTTGGAAGCTTATTT+CGG + chr2_2:44980922-44980941 Msa0253290:five_prime_UTR 30.0%
!! TTGAATGTGAGAGTATTTAG+TGG + chr2_2:44980967-44980986 Msa0253290:five_prime_UTR 30.0%
!! GTGAAATTTGTTGTAGATCA+AGG + chr2_2:44981134-44981153 Msa0253290:five_prime_UTR 30.0%
TGATGATTTAGCATCACAAA+AGG + chr2_2:44981179-44981198 Msa0253290:five_prime_UTR 30.0%
GATGATTTAGCATCACAAAA+GGG + chr2_2:44981180-44981199 Msa0253290:five_prime_UTR 30.0%
!!! TAGTTTTAGTCTTAGTAGTG+AGG + chr2_2:44981252-44981271 Msa0253290:five_prime_UTR 30.0%
AAACTGCGATGTTTATTGAA+CGG + chr2_2:44981422-44981441 Msa0253290:CDS 30.0%
GTAAGAACAAAAATTCAGAC+GGG - chr2_2:44981664-44981683 None:intergenic 30.0%
! GCTTTAAGCTTATCATTCAA+TGG + chr2_2:44981760-44981779 Msa0253290:intron 30.0%
!! GGTCATTCTAGAATATAAAG+TGG + chr2_2:44981811-44981830 Msa0253290:intron 30.0%
! AAATTTAGGAGAGTAATGGA+TGG + chr2_2:44981966-44981985 Msa0253290:intron 30.0%
ACAGTTCAATTGAATGTTTC+AGG + chr2_2:44982270-44982289 Msa0253290:intron 30.0%
ACAAAAGACGGATATACAAT+AGG - chr2_2:44982499-44982518 None:intergenic 30.0%
AAATCAGAACTAATCTGAAC+TGG - chr2_2:44983065-44983084 None:intergenic 30.0%
TTGCTACCACTTCATTATAT+TGG + chr2_2:44983295-44983314 Msa0253290:intron 30.0%
CAACAACCAATATAATGAAG+TGG - chr2_2:44983304-44983323 None:intergenic 30.0%
! GGATTTTGTCTTGAGTATAT+GGG + chr2_2:44983537-44983556 Msa0253290:intron 30.0%
AAATGTGAGAACACTGTAAT+GGG - chr2_2:44983740-44983759 None:intergenic 30.0%
AACAGAATACATAGCATATG+CGG - chr2_2:44983869-44983888 None:intergenic 30.0%
GTATTCTGTTCAAGTAAAAG+TGG + chr2_2:44983879-44983898 Msa0253290:CDS 30.0%
TGAAAGAAATGCAAGGTTTA+TGG - chr2_2:44983926-44983945 None:intergenic 30.0%
! TGTCATTTGAAAGAAATGCA+AGG - chr2_2:44983933-44983952 None:intergenic 30.0%
!!! CAGTTTTGAAAAAGGAATAC+CGG + chr2_2:44984283-44984302 Msa0253290:CDS 30.0%
TGATGAAAATGATAACAAGC+TGG - chr2_2:44984654-44984673 None:intergenic 30.0%
GTGCATCCTGATAAAAATAT+GGG + chr2_2:44984688-44984707 Msa0253290:CDS 30.0%
TTAACAAGTATGAAACTTCC+AGG + chr2_2:44984884-44984903 Msa0253290:intron 30.0%
!! AAAAAAAGGTACTCTATTGC+AGG + chr2_2:44985208-44985227 Msa0253290:intron 30.0%
GAAATTAAGAGAAAGAAGGA+AGG - chr2_2:44985384-44985403 None:intergenic 30.0%
GCATGAAATTAAGAGAAAGA+AGG - chr2_2:44985388-44985407 None:intergenic 30.0%
TCAATGCAAATCCAATCAAA+TGG - chr2_2:44985976-44985995 None:intergenic 30.0%
ATGAAATAAAGTAGGTTGTC+AGG - chr2_2:44986041-44986060 None:intergenic 30.0%
! AACCTACTTTATTTCATGCA+GGG + chr2_2:44986044-44986063 Msa0253290:intron 30.0%
!!! TTCTTTTGAGGCAATTTGAA+TGG - chr2_2:44986284-44986303 None:intergenic 30.0%
TTCAAATTGCCTCAAAAGAA+AGG + chr2_2:44986284-44986303 Msa0253290:CDS 30.0%
TCAAATTGCCTCAAAAGAAA+GGG + chr2_2:44986285-44986304 Msa0253290:CDS 30.0%
AAAAGAAAGGGAAAAAGCAA+TGG + chr2_2:44986297-44986316 Msa0253290:CDS 30.0%
TTTGTTTAAGAAACCCGAAA+TGG + chr2_2:44986405-44986424 Msa0253290:three_prime_UTR 30.0%
TTGATCTCAGTAATCCATTT+CGG - chr2_2:44986422-44986441 None:intergenic 30.0%
TTACTGAGATCAAAACTAGA+AGG + chr2_2:44986429-44986448 Msa0253290:three_prime_UTR 30.0%
! TATCAAAAGTGCAAAAACCT+AGG + chr2_2:44986571-44986590 Msa0253290:three_prime_UTR 30.0%
GTTACTCACATTGATCATTA+AGG + chr2_2:44986603-44986622 Msa0253290:three_prime_UTR 30.0%
!!! AGAAAGTGCTCTTTTCAATA+TGG + chr2_2:44986700-44986719 Msa0253290:three_prime_UTR 30.0%
! TGGTTACTAAGGATTTCTTT+TGG + chr2_2:44986720-44986739 Msa0253290:three_prime_UTR 30.0%
! TTTTGTAAAGAGAGGAGTGA+GGG - chr2_2:44980450-44980469 None:intergenic 35.0%
! CCCTCTTTCAATCAGATTTT+AGG + chr2_2:44980670-44980689 Msa0253290:five_prime_UTR 35.0%
CCCTAAAATCTGATTGAAAG+AGG - chr2_2:44980674-44980693 None:intergenic 35.0%
! TGTGTTTTGTGAAAAAGGGA+TGG + chr2_2:44980851-44980870 Msa0253290:five_prime_UTR 35.0%
!! GAGAGTATTTAGTGGTATCA+TGG + chr2_2:44980975-44980994 Msa0253290:five_prime_UTR 35.0%
AAAGAGAGAAAGAGGCAAAA+TGG - chr2_2:44981025-44981044 None:intergenic 35.0%
AATCCAGAAAAGAGAGAAAG+AGG - chr2_2:44981033-44981052 None:intergenic 35.0%
CAAAAGGGTCATTGGATTTA+TGG + chr2_2:44981195-44981214 Msa0253290:five_prime_UTR 35.0%
TAGGGTTGTTCAATCAAGTT+TGG + chr2_2:44981332-44981351 Msa0253290:CDS 35.0%
AGGGTTGTTCAATCAAGTTT+GGG + chr2_2:44981333-44981352 Msa0253290:CDS 35.0%
TGATGCTCTTGCTTATAATG+TGG + chr2_2:44981563-44981582 Msa0253290:CDS 35.0%
TGTGAGAAGCAATGTATTCT+TGG - chr2_2:44982253-44982272 None:intergenic 35.0%
AATACTTGGGTTATACTCCT+GGG + chr2_2:44982314-44982333 Msa0253290:CDS 35.0%
TGGCATACATCCACAAAATA+AGG - chr2_2:44982366-44982385 None:intergenic 35.0%
TAATCCTGTGATCAGAAAGT+TGG - chr2_2:44982386-44982405 None:intergenic 35.0%
ACAGGATTACTACTCATAGT+TGG + chr2_2:44982397-44982416 Msa0253290:CDS 35.0%
TAGTGACCATAAAAGAAGAG+AGG + chr2_2:44982468-44982487 Msa0253290:intron 35.0%
! GCATATCCTCTCTTCTTTTA+TGG - chr2_2:44982477-44982496 None:intergenic 35.0%
ACTCCACTATCAAAATTGTG+AGG + chr2_2:44982528-44982547 Msa0253290:intron 35.0%
ATCTCATAGGTAATCCAACA+CGG - chr2_2:44982595-44982614 None:intergenic 35.0%
TGTTGGATTACCTATGAGAT+TGG + chr2_2:44982595-44982614 Msa0253290:intron 35.0%
GTTGGATTACCTATGAGATT+GGG + chr2_2:44982596-44982615 Msa0253290:intron 35.0%
AAATCCTACTTAGGATAGTG+AGG - chr2_2:44983145-44983164 None:intergenic 35.0%
TCAAACTCAAAATCCTACCT+AGG - chr2_2:44983235-44983254 None:intergenic 35.0%
AAATAGAAGCTAAGCCTCTT+TGG - chr2_2:44983357-44983376 None:intergenic 35.0%
! GGGATTTTGTCTTGAGTATA+TGG + chr2_2:44983536-44983555 Msa0253290:intron 35.0%
GAAATGTGAGAACACTGTAA+TGG - chr2_2:44983741-44983760 None:intergenic 35.0%
AATTCTCAGATTCAACTGGT+GGG - chr2_2:44984074-44984093 None:intergenic 35.0%
AAATTCTCAGATTCAACTGG+TGG - chr2_2:44984075-44984094 None:intergenic 35.0%
TGCAAATTCTCAGATTCAAC+TGG - chr2_2:44984078-44984097 None:intergenic 35.0%
! TGTCTGCTCTTTTACAACTT+TGG - chr2_2:44984175-44984194 None:intergenic 35.0%
CTTAATCATTATGATGCCCT+TGG + chr2_2:44984231-44984250 Msa0253290:CDS 35.0%
!!! TGATGCAGCAGTTTTGAAAA+AGG + chr2_2:44984275-44984294 Msa0253290:CDS 35.0%
GAAAAAGGAATACCGGAAAA+AGG + chr2_2:44984290-44984309 Msa0253290:CDS 35.0%
ATATTTAGTGCAGCATTGCA+AGG - chr2_2:44984386-44984405 None:intergenic 35.0%
CGTGCATCCTGATAAAAATA+TGG + chr2_2:44984687-44984706 Msa0253290:CDS 35.0%
!! GAACTGCCCATATTTTTATC+AGG - chr2_2:44984697-44984716 None:intergenic 35.0%
GAAACTTCAATGTGCATATG+AGG + chr2_2:44984738-44984757 Msa0253290:CDS 35.0%
CTTATGATTCTTCAAACTCG+TGG - chr2_2:44985062-44985081 None:intergenic 35.0%
TGCATTGTAATGAACGGATA+TGG - chr2_2:44985149-44985168 None:intergenic 35.0%
TTGTTCGAAAGGTAAGTGAA+GGG - chr2_2:44985182-44985201 None:intergenic 35.0%
ATTGTTCGAAAGGTAAGTGA+AGG - chr2_2:44985183-44985202 None:intergenic 35.0%
TCCTGAATTTACATCTTCTC+TGG + chr2_2:44985422-44985441 Msa0253290:intron 35.0%
TCCAGAGAAGATGTAAATTC+AGG - chr2_2:44985426-44985445 None:intergenic 35.0%
!! AGATGGATGGGTTGAATATA+AGG + chr2_2:44985483-44985502 Msa0253290:CDS 35.0%
!! GATGGATGGGTTGAATATAA+GGG + chr2_2:44985484-44985503 Msa0253290:CDS 35.0%
GGTTGAATATAAGGGATCTT+TGG + chr2_2:44985492-44985511 Msa0253290:CDS 35.0%
GCTTTGATCTTGTCTTTCAT+AGG + chr2_2:44985594-44985613 Msa0253290:intron 35.0%
TGATCAGTGTTGTCAAATAG+CGG + chr2_2:44985739-44985758 Msa0253290:intron 35.0%
! CAACCTACTTTATTTCATGC+AGG + chr2_2:44986043-44986062 Msa0253290:intron 35.0%
TTCCCTGCATGAAATAAAGT+AGG - chr2_2:44986049-44986068 None:intergenic 35.0%
! ACTTTATTTCATGCAGGGAA+TGG + chr2_2:44986049-44986068 Msa0253290:intron 35.0%
ATCTACTTGAGTTACAGGAA+TGG - chr2_2:44986136-44986155 None:intergenic 35.0%
TAACTCAAGTAGATTCCCAT+GGG + chr2_2:44986142-44986161 Msa0253290:CDS 35.0%
GTCTTCATCCATCATCATTT+CGG - chr2_2:44986177-44986196 None:intergenic 35.0%
!!! TGCTTTTTCCCTTTCTTTTG+AGG - chr2_2:44986296-44986315 None:intergenic 35.0%
TCTTGCTGAAAAGCTCAATA+GGG + chr2_2:44986329-44986348 Msa0253290:exon 35.0%
TGATCTCAGTAATCCATTTC+GGG - chr2_2:44986421-44986440 None:intergenic 35.0%
GTAAAGAAAATTGGCAACCT+TGG - chr2_2:44986515-44986534 None:intergenic 35.0%
GTGCAAAAACCTAGGTTTAT+AGG + chr2_2:44986579-44986598 Msa0253290:three_prime_UTR 35.0%
TGAGTAACTCCTATAAACCT+AGG - chr2_2:44986591-44986610 None:intergenic 35.0%
! GTTTTGTAAAGAGAGGAGTG+AGG - chr2_2:44980451-44980470 None:intergenic 40.0%
GAGGAAAAGGGGTTTCAAAA+GGG - chr2_2:44980595-44980614 None:intergenic 40.0%
TGAGGAAAAGGGGTTTCAAA+AGG - chr2_2:44980596-44980615 None:intergenic 40.0%
TGGAGCAGAAATGAAGAATG+AGG - chr2_2:44980614-44980633 None:intergenic 40.0%
TAGGGTCGTTGAAAAAGTAG+AGG + chr2_2:44980814-44980833 Msa0253290:five_prime_UTR 40.0%
! TTGCCTCTTTCTCTCTTTTC+TGG + chr2_2:44981027-44981046 Msa0253290:five_prime_UTR 40.0%
TAGCATCACAAAAGGGTCAT+TGG + chr2_2:44981187-44981206 Msa0253290:five_prime_UTR 40.0%
GGTCATTGGATTTATGGTGA+TGG + chr2_2:44981201-44981220 Msa0253290:five_prime_UTR 40.0%
ACTTCCATCAAGTTTGCAAG+TGG + chr2_2:44981279-44981298 Msa0253290:five_prime_UTR 40.0%
GATTCCACTTGCAAACTTGA+TGG - chr2_2:44981286-44981305 None:intergenic 40.0%
TTTGCAAGTGGAATCTGTAG+AGG + chr2_2:44981291-44981310 Msa0253290:five_prime_UTR 40.0%
!! TCATGGTGATGGAGGATATA+GGG + chr2_2:44981314-44981333 Msa0253290:exon 40.0%
GGGTTGTTCAATCAAGTTTG+GGG + chr2_2:44981334-44981353 Msa0253290:CDS 40.0%
TGTTCAATCAAGTTTGGGGA+TGG + chr2_2:44981338-44981357 Msa0253290:CDS 40.0%
CGATGTTTATTGAACGGCAT+TGG + chr2_2:44981428-44981447 Msa0253290:CDS 40.0%
TCTGACTTCGATGTATTGCT+TGG + chr2_2:44981600-44981619 Msa0253290:CDS 40.0%
! GGTTTACGTGCTTGTTAGTA+TGG + chr2_2:44981621-44981640 Msa0253290:CDS 40.0%
!! TGAATGTTTCAGGTTACTGC+TGG + chr2_2:44982280-44982299 Msa0253290:intron 40.0%
!! GAATGTTTCAGGTTACTGCT+GGG + chr2_2:44982281-44982300 Msa0253290:intron 40.0%
!! AATGTTTCAGGTTACTGCTG+GGG + chr2_2:44982282-44982301 Msa0253290:intron 40.0%
! CAGGAGTATAACCCAAGTAT+TGG - chr2_2:44982315-44982334 None:intergenic 40.0%
CAATACTTGGGTTATACTCC+TGG + chr2_2:44982313-44982332 Msa0253290:CDS 40.0%
TATGCCAACTTTCTGATCAC+AGG + chr2_2:44982379-44982398 Msa0253290:CDS 40.0%
GGATTACTACTCATAGTTGG+AGG + chr2_2:44982400-44982419 Msa0253290:CDS 40.0%
!! GTGCCTCACAATTTTGATAG+TGG - chr2_2:44982534-44982553 None:intergenic 40.0%
AGGTAATCCAACACGGTTTA+GGG - chr2_2:44982588-44982607 None:intergenic 40.0%
TAGGTAATCCAACACGGTTT+AGG - chr2_2:44982589-44982608 None:intergenic 40.0%
CAAAGGGAAAGAAGATCATG+CGG - chr2_2:44982800-44982819 None:intergenic 40.0%
TGATCTTCTTTCCCTTTGCT+TGG + chr2_2:44982802-44982821 Msa0253290:intron 40.0%
AACTCAAAATGGTGCTCATC+AGG - chr2_2:44982841-44982860 None:intergenic 40.0%
!!! TGAGCACCATTTTGAGTTTG+TGG + chr2_2:44982843-44982862 Msa0253290:intron 40.0%
!!! GTGGATTTTAAGGCTCTAGA+TGG + chr2_2:44982862-44982881 Msa0253290:intron 40.0%
TCAAAATCCTACCTAGGACA+GGG - chr2_2:44983229-44983248 None:intergenic 40.0%
TGTTTGTCAATCACGAATGC+AGG + chr2_2:44983796-44983815 Msa0253290:intron 40.0%
CTGTTCAAGTAAAAGTGGGA+TGG + chr2_2:44983884-44983903 Msa0253290:CDS 40.0%
GAAATGCAAGGTTTATGGCA+AGG - chr2_2:44983921-44983940 None:intergenic 40.0%
CTGCTTATCAACAACTGATG+TGG - chr2_2:44984136-44984155 None:intergenic 40.0%
! CTGCATCAATCTTTTTGTGG+CGG - chr2_2:44984263-44984282 None:intergenic 40.0%
! CTGCTGCATCAATCTTTTTG+TGG - chr2_2:44984266-44984285 None:intergenic 40.0%
CCAAACAACACCCATTAAGT+CGG - chr2_2:44984440-44984459 None:intergenic 40.0%
AGTGCGGTAATTCACATGTT+TGG + chr2_2:44985279-44985298 Msa0253290:CDS 40.0%
GTGCGGTAATTCACATGTTT+GGG + chr2_2:44985280-44985299 Msa0253290:CDS 40.0%
ATGTTTGGGTATGCACTAAC+AGG + chr2_2:44985294-44985313 Msa0253290:CDS 40.0%
! TTTACATCTTCTCTGGAAGC+AGG + chr2_2:44985429-44985448 Msa0253290:intron 40.0%
CTGTCAGTTTCATCAAGCAA+AGG + chr2_2:44985456-44985475 Msa0253290:CDS 40.0%
CAGTTTCATCAAGCAAAGGA+TGG + chr2_2:44985460-44985479 Msa0253290:CDS 40.0%
!!! AGGGATCTTTGGTTTTTGAC+AGG + chr2_2:44985503-44985522 Msa0253290:CDS 40.0%
!! ATCAGAATGGGCTATATGTC+AGG + chr2_2:44985666-44985685 Msa0253290:intron 40.0%
GCTATTTGACAACACTGATC+AGG - chr2_2:44985740-44985759 None:intergenic 40.0%
TAGCGGCTATATAAACGCTA+TGG + chr2_2:44985846-44985865 Msa0253290:intron 40.0%
TGTTGTCAATCTCAGATCGT+GGG - chr2_2:44985911-44985930 None:intergenic 40.0%
AGTAGACTGAGTACCAAATC+AGG - chr2_2:44985939-44985958 None:intergenic 40.0%
ATCAAATGGAACACTGTCTC+TGG - chr2_2:44985962-44985981 None:intergenic 40.0%
GAGACAGTGTTCCATTTGAT+TGG + chr2_2:44985962-44985981 Msa0253290:intron 40.0%
ACCATGTTTACATGGAAGCT+CGG - chr2_2:44986098-44986117 None:intergenic 40.0%
AGCTTCCATGTAAACATGGT+TGG + chr2_2:44986098-44986117 Msa0253290:CDS 40.0%
TGGGAATCTACTTGAGTTAC+AGG - chr2_2:44986141-44986160 None:intergenic 40.0%
GTAACTCAAGTAGATTCCCA+TGG + chr2_2:44986141-44986160 Msa0253290:CDS 40.0%
AAGTAGATTCCCATGGGATT+TGG + chr2_2:44986148-44986167 Msa0253290:CDS 40.0%
GTCTTGCTGAAAAGCTCAAT+AGG + chr2_2:44986328-44986347 Msa0253290:exon 40.0%
TTTCATTGCCTACATCCCAA+AGG + chr2_2:44986363-44986382 Msa0253290:three_prime_UTR 40.0%
TTCATTGCCTACATCCCAAA+GGG + chr2_2:44986364-44986383 Msa0253290:three_prime_UTR 40.0%
TTACTCCATCCAATCCCTTT+GGG - chr2_2:44986381-44986400 None:intergenic 40.0%
TTTACTCCATCCAATCCCTT+TGG - chr2_2:44986382-44986401 None:intergenic 40.0%
GTGGTGAATTATAAGAGCCA+AGG + chr2_2:44986495-44986514 Msa0253290:three_prime_UTR 40.0%
! CTTGACCCTTTTACCCGTTT+AGG - chr2_2:44980771-44980790 None:intergenic 45.0%
CTAAACGGGTAAAAGGGTCA+AGG + chr2_2:44980769-44980788 Msa0253290:five_prime_UTR 45.0%
AGTGGAATCTGTAGAGGTCA+TGG + chr2_2:44981297-44981316 Msa0253290:exon 45.0%
ATCTGTAGAGGTCATGGTGA+TGG + chr2_2:44981303-44981322 Msa0253290:exon 45.0%
!! GTCATGGTGATGGAGGATAT+AGG + chr2_2:44981313-44981332 Msa0253290:exon 45.0%
ATCAAGTTTGGGGATGGCTT+CGG + chr2_2:44981344-44981363 Msa0253290:CDS 45.0%
TTTGGAAGGACTCTGCTGTA+AGG + chr2_2:44981509-44981528 Msa0253290:CDS 45.0%
TTGGAAGGACTCTGCTGTAA+GGG + chr2_2:44981510-44981529 Msa0253290:CDS 45.0%
GACGCTGCCCTTCAAAATTT+AGG + chr2_2:44981952-44981971 Msa0253290:intron 45.0%
! ACTCCTGGGCTTTTTATCGT+AGG + chr2_2:44982328-44982347 Msa0253290:CDS 45.0%
! CTCCTGGGCTTTTTATCGTA+GGG + chr2_2:44982329-44982348 Msa0253290:CDS 45.0%
! TTTTTGCCCCTAAACCGTGT+TGG + chr2_2:44982578-44982597 Msa0253290:intron 45.0%
GGTAATCCAACACGGTTTAG+GGG - chr2_2:44982587-44982606 None:intergenic 45.0%
CTATGAGATTGGGAGCTGTT+GGG + chr2_2:44982606-44982625 Msa0253290:intron 45.0%
CACGACGTGATGTAAGTGTA+TGG - chr2_2:44982724-44982743 None:intergenic 45.0%
TACACTTACATCACGTCGTG+TGG + chr2_2:44982724-44982743 Msa0253290:intron 45.0%
TCCTCCTCACTATCCTAAGT+AGG + chr2_2:44983138-44983157 Msa0253290:intron 45.0%
TCCTACTTAGGATAGTGAGG+AGG - chr2_2:44983142-44983161 None:intergenic 45.0%
TGTAACTCGAGACTGTAGCA+CGG - chr2_2:44983190-44983209 None:intergenic 45.0%
AAAATCCTACCTAGGACAGG+GGG - chr2_2:44983227-44983246 None:intergenic 45.0%
CAAAATCCTACCTAGGACAG+GGG - chr2_2:44983228-44983247 None:intergenic 45.0%
CTCAAAATCCTACCTAGGAC+AGG - chr2_2:44983230-44983249 None:intergenic 45.0%
AAGCTAAGCCTCTTTGGTTG+GGG - chr2_2:44983351-44983370 None:intergenic 45.0%
GAAGCTAAGCCTCTTTGGTT+GGG - chr2_2:44983352-44983371 None:intergenic 45.0%
AGAAGCTAAGCCTCTTTGGT+TGG - chr2_2:44983353-44983372 None:intergenic 45.0%
! GCACGCTTGGTGGTATTAAT+TGG + chr2_2:44983841-44983860 Msa0253290:CDS 45.0%
CAAGTAAAAGTGGGATGGCT+TGG + chr2_2:44983889-44983908 Msa0253290:CDS 45.0%
TCCTGAAGAGCAGAAGCAAT+CGG + chr2_2:44984002-44984021 Msa0253290:CDS 45.0%
GAAGCAATCGGAGACAGTTA+TGG + chr2_2:44984014-44984033 Msa0253290:CDS 45.0%
TCAGATTCAACTGGTGGGAT+AGG - chr2_2:44984069-44984088 None:intergenic 45.0%
TTTGTGGCGGCTAAATCCAA+GGG - chr2_2:44984250-44984269 None:intergenic 45.0%
! TTTTGTGGCGGCTAAATCCA+AGG - chr2_2:44984251-44984270 None:intergenic 45.0%
TTTAGTGCAGCATTGCAAGG+TGG - chr2_2:44984383-44984402 None:intergenic 45.0%
!! CCGACTTAATGGGTGTTGTT+TGG + chr2_2:44984437-44984456 Msa0253290:intron 45.0%
GTTCTGTCTAAAAGCTGCAG+AGG + chr2_2:44984765-44984784 Msa0253290:intron 45.0%
TCACAGAGTCAGAAAGAACC+TGG - chr2_2:44984905-44984924 None:intergenic 45.0%
TACCTGATGTGAACTGCTGT+GGG - chr2_2:44984994-44985013 None:intergenic 45.0%
TTACCTGATGTGAACTGCTG+TGG - chr2_2:44984995-44985014 None:intergenic 45.0%
ATCGTTCCGAAGAATCCAGA+CGG + chr2_2:44985243-44985262 Msa0253290:CDS 45.0%
CTGTATCCGTCTGGATTCTT+CGG - chr2_2:44985252-44985271 None:intergenic 45.0%
CATCAAGCAAAGGATGGAGA+TGG + chr2_2:44985466-44985485 Msa0253290:CDS 45.0%
AAGCAAAGGATGGAGATGGA+TGG + chr2_2:44985470-44985489 Msa0253290:CDS 45.0%
AGCAAAGGATGGAGATGGAT+GGG + chr2_2:44985471-44985490 Msa0253290:CDS 45.0%
ATAGCAGTGCTACAACGTAG+CGG + chr2_2:44985764-44985783 Msa0253290:intron 45.0%
TCTCAGATCGTGGGAAATAG+CGG - chr2_2:44985902-44985921 None:intergenic 45.0%
GTGTTGTCAATCTCAGATCG+TGG - chr2_2:44985912-44985931 None:intergenic 45.0%
! CGATCTGAGATTGACAACAC+TGG + chr2_2:44985912-44985931 Msa0253290:intron 45.0%
TGACAACACTGGACCTGATT+TGG + chr2_2:44985923-44985942 Msa0253290:intron 45.0%
AGGTTGTCAGGTACAGAAAG+TGG - chr2_2:44986029-44986048 None:intergenic 45.0%
TGTTTACATGGAAGCTCGGT+CGG - chr2_2:44986094-44986113 None:intergenic 45.0%
ACCGAGCTTCCATGTAAACA+TGG + chr2_2:44986094-44986113 Msa0253290:CDS 45.0%
CCAAGCCAACCATGTTTACA+TGG - chr2_2:44986106-44986125 None:intergenic 45.0%
! CCATGTAAACATGGTTGGCT+TGG + chr2_2:44986103-44986122 Msa0253290:CDS 45.0%
TTTGGACGCCGAAATGATGA+TGG + chr2_2:44986166-44986185 Msa0253290:CDS 45.0%
!! GATGATGGATGAAGACGAAG+AGG + chr2_2:44986181-44986200 Msa0253290:CDS 45.0%
ATTTGACCTGTGGCTTCAAC+AGG + chr2_2:44986205-44986224 Msa0253290:CDS 45.0%
! CTTCAACAGGCTTTAGCATC+TGG + chr2_2:44986218-44986237 Msa0253290:CDS 45.0%
!! ATCCAATCCCTTTGGGATGT+AGG - chr2_2:44986374-44986393 None:intergenic 45.0%
TACATCCCAAAGGGATTGGA+TGG + chr2_2:44986373-44986392 Msa0253290:three_prime_UTR 45.0%
!! GATGAGTCATGAGAGCATTG+TGG + chr2_2:44986476-44986495 Msa0253290:three_prime_UTR 45.0%
AAACGACTCATGCTCAGTTC+TGG - chr2_2:44986632-44986651 None:intergenic 45.0%
!! TGTAGAGGTCATGGTGATGG+AGG + chr2_2:44981306-44981325 Msa0253290:exon 50.0%
GGTCACGAAAAGATGCCTGT+TGG + chr2_2:44981365-44981384 Msa0253290:CDS 50.0%
!! TATTGAACGGCATTGGCCGA+TGG + chr2_2:44981435-44981454 Msa0253290:CDS 50.0%
ATGCAGGGGTTGCTCGAAAT+TGG + chr2_2:44981459-44981478 Msa0253290:CDS 50.0%
TGCAGGGGTTGCTCGAAATT+GGG + chr2_2:44981460-44981479 Msa0253290:CDS 50.0%
TGGAAGGACTCTGCTGTAAG+GGG + chr2_2:44981511-44981530 Msa0253290:CDS 50.0%
TGGGGTTGCTGTCCAATACT+TGG + chr2_2:44982300-44982319 Msa0253290:CDS 50.0%
GGGGTTGCTGTCCAATACTT+GGG + chr2_2:44982301-44982320 Msa0253290:CDS 50.0%
AGCCCTACGATAAAAAGCCC+AGG - chr2_2:44982334-44982353 None:intergenic 50.0%
CCAACAGCTCCCAATCTCAT+AGG - chr2_2:44982608-44982627 None:intergenic 50.0%
CCTATGAGATTGGGAGCTGT+TGG + chr2_2:44982605-44982624 Msa0253290:intron 50.0%
GGGAGCTGTTGGGATCATAT+TGG + chr2_2:44982616-44982635 Msa0253290:intron 50.0%
! TAAACACCCCCTTTTCCCTG+TGG + chr2_2:44982663-44982682 Msa0253290:intron 50.0%
ATACGACGGCACCAAGCAAA+GGG - chr2_2:44982816-44982835 None:intergenic 50.0%
GTGCTCATCAGGTGATACGA+CGG - chr2_2:44982830-44982849 None:intergenic 50.0%
AAATCCTACCTAGGACAGGG+GGG - chr2_2:44983226-44983245 None:intergenic 50.0%
CTATTTCCCCCCAACCAAAG+AGG + chr2_2:44983340-44983359 Msa0253290:intron 50.0%
AGCTAAGCCTCTTTGGTTGG+GGG - chr2_2:44983350-44983369 None:intergenic 50.0%
TTCCCTAAATCGTGCACGCT+TGG + chr2_2:44983828-44983847 Msa0253290:CDS 50.0%
CACCAAGCGTGCACGATTTA+GGG - chr2_2:44983833-44983852 None:intergenic 50.0%
TCCGATTGCTTCTGCTCTTC+AGG - chr2_2:44984006-44984025 None:intergenic 50.0%
ACAACTGATGTGGTGACAGC+AGG - chr2_2:44984126-44984145 None:intergenic 50.0%
GTGAACTGCTGTGGGATTTC+TGG - chr2_2:44984986-44985005 None:intergenic 50.0%
ATCCCACAGCAGTTCACATC+AGG + chr2_2:44984989-44985008 Msa0253290:CDS 50.0%
CTTTGTGCACTGTATCCGTC+TGG - chr2_2:44985261-44985280 None:intergenic 50.0%
CGGATACAGTGCACAAAGTG+CGG + chr2_2:44985263-44985282 Msa0253290:CDS 50.0%
GGTATGCACTAACAGGAGCA+AGG + chr2_2:44985301-44985320 Msa0253290:CDS 50.0%
GACCTGACACCATCTTGCTT+TGG - chr2_2:44985327-44985346 None:intergenic 50.0%
! CCGCACAAACAAAAGCACGT+GGG - chr2_2:44985627-44985646 None:intergenic 50.0%
!! CCCACGTGCTTTTGTTTGTG+CGG + chr2_2:44985624-44985643 Msa0253290:intron 50.0%
! TCCGCACAAACAAAAGCACG+TGG - chr2_2:44985628-44985647 None:intergenic 50.0%
! TCATGCAGGGAATGGCTTGT+AGG + chr2_2:44986057-44986076 Msa0253290:intron 50.0%
TTTCGGCGTCCAAATCCCAT+GGG - chr2_2:44986160-44986179 None:intergenic 50.0%
ATTTCGGCGTCCAAATCCCA+TGG - chr2_2:44986161-44986180 None:intergenic 50.0%
!! ACGAAGAGGCATTTGACCTG+TGG + chr2_2:44986195-44986214 Msa0253290:CDS 50.0%
CTAAAGCCTGTTGAAGCCAC+AGG - chr2_2:44986214-44986233 None:intergenic 50.0%
TTTGCGAGTCCTCAAAACGC+AGG + chr2_2:44986246-44986265 Msa0253290:CDS 50.0%
! CCAACTCTTCCTGCGTTTTG+AGG - chr2_2:44986258-44986277 None:intergenic 50.0%
CCTCAAAACGCAGGAAGAGT+TGG + chr2_2:44986255-44986274 Msa0253290:CDS 50.0%
TGCCTACATCCCAAAGGGAT+TGG + chr2_2:44986369-44986388 Msa0253290:three_prime_UTR 50.0%
! GCATTGGCCGATGGTATGCA+GGG + chr2_2:44981444-44981463 Msa0253290:CDS 55.0%
CATTGGCCGATGGTATGCAG+GGG + chr2_2:44981445-44981464 Msa0253290:CDS 55.0%
GAGCAACCCCTGCATACCAT+CGG - chr2_2:44981454-44981473 None:intergenic 55.0%
GCAGGGGTTGCTCGAAATTG+GGG + chr2_2:44981461-44981480 Msa0253290:CDS 55.0%
GGAAGGACTCTGCTGTAAGG+GGG + chr2_2:44981512-44981531 Msa0253290:CDS 55.0%
TTCTTCATCGTCGCACCTCG+TGG + chr2_2:44982750-44982769 Msa0253290:intron 55.0%
GATACGACGGCACCAAGCAA+AGG - chr2_2:44982817-44982836 None:intergenic 55.0%
GCTAAGCCTCTTTGGTTGGG+GGG - chr2_2:44983349-44983368 None:intergenic 55.0%
CCACCAAGCGTGCACGATTT+AGG - chr2_2:44983834-44983853 None:intergenic 55.0%
CCTAAATCGTGCACGCTTGG+TGG + chr2_2:44983831-44983850 Msa0253290:CDS 55.0%
GGTGACAGCAGGTGGTTTAC+TGG - chr2_2:44984115-44984134 None:intergenic 55.0%
ACTGATGTGGTGACAGCAGG+TGG - chr2_2:44984123-44984142 None:intergenic 55.0%
! CTGGCACACGCTTTTAGCCA+TGG - chr2_2:44984967-44984986 None:intergenic 55.0%
GGAGCAAGGCCAAAGCAAGA+TGG + chr2_2:44985315-44985334 Msa0253290:CDS 55.0%
GGCCAAAGCAAGATGGTGTC+AGG + chr2_2:44985322-44985341 Msa0253290:CDS 55.0%
!! TATGGTGCTGTAGCGCGTAG+TGG + chr2_2:44985864-44985883 Msa0253290:intron 55.0%
TACATGGAAGCTCGGTCGGT+GGG - chr2_2:44986090-44986109 None:intergenic 55.0%
TTACATGGAAGCTCGGTCGG+TGG - chr2_2:44986091-44986110 None:intergenic 55.0%
CACAGTTCGAGCACGCCAAC+AGG - chr2_2:44981383-44981402 None:intergenic 60.0%
CTGTTGGCGTGCTCGAACTG+TGG + chr2_2:44981381-44981400 Msa0253290:CDS 60.0%
!! GGCATTGGCCGATGGTATGC+AGG + chr2_2:44981443-44981462 Msa0253290:CDS 60.0%
!! TGGGGGTGCCACAGGGAAAA+GGG - chr2_2:44982674-44982693 None:intergenic 60.0%
AGAGTCTGCGCACAGAGGCA+GGG - chr2_2:44982700-44982719 None:intergenic 60.0%
ATGGCAGAGTCTGCGCACAG+AGG - chr2_2:44982705-44982724 None:intergenic 60.0%
CTAGAGTCCGCTGGAGGGAT+TGG - chr2_2:44982776-44982795 None:intergenic 60.0%
! CAATCCCTCCAGCGGACTCT+AGG + chr2_2:44982774-44982793 Msa0253290:intron 60.0%
TCTCTCTTCCCCCCTGTCCT+AGG + chr2_2:44983215-44983234 Msa0253290:intron 60.0%
TCTTCCCCCCTGTCCTAGGT+AGG + chr2_2:44983219-44983238 Msa0253290:intron 60.0%
AAGCTCGGTCGGTGGGTGTT+AGG - chr2_2:44986083-44986102 None:intergenic 60.0%
! GGGGTGCCACAGGGAAAAGG+GGG - chr2_2:44982672-44982691 None:intergenic 65.0%
!! GGGGGTGCCACAGGGAAAAG+GGG - chr2_2:44982673-44982692 None:intergenic 65.0%
!! CTGGGGGTGCCACAGGGAAA+AGG - chr2_2:44982675-44982694 None:intergenic 65.0%
! CTTTTCCCTGTGGCACCCCC+AGG + chr2_2:44982673-44982692 Msa0253290:intron 65.0%
GAGTCTGCGCACAGAGGCAG+GGG - chr2_2:44982699-44982718 None:intergenic 65.0%
CAGAGTCTGCGCACAGAGGC+AGG - chr2_2:44982701-44982720 None:intergenic 65.0%
CTCGTGGCCAATCCCTCCAG+CGG + chr2_2:44982766-44982785 Msa0253290:intron 65.0%
TCATGCGGCCTAGAGTCCGC+TGG - chr2_2:44982785-44982804 None:intergenic 65.0%
!! CGCTGGAGGGATTGGCCACG+AGG - chr2_2:44982768-44982787 None:intergenic 70.0%
GCGGCCTAGAGTCCGCTGGA+GGG - chr2_2:44982781-44982800 None:intergenic 70.0%
TGCGGCCTAGAGTCCGCTGG+AGG - chr2_2:44982782-44982801 None:intergenic 70.0%
!! AGGGGCCTGGGGGTGCCACA+GGG - chr2_2:44982681-44982700 None:intergenic 75.0%
GCACAGAGGCAGGGGCCTGG+GGG - chr2_2:44982691-44982710 None:intergenic 75.0%
CGCACAGAGGCAGGGGCCTG+GGG - chr2_2:44982692-44982711 None:intergenic 75.0%
GCGCACAGAGGCAGGGGCCT+GGG - chr2_2:44982693-44982712 None:intergenic 75.0%
TGCGCACAGAGGCAGGGGCC+TGG - chr2_2:44982694-44982713 None:intergenic 75.0%
!!! CAGGGGCCTGGGGGTGCCAC+AGG - chr2_2:44982682-44982701 None:intergenic 80.0%
Chromosome Type Strat End Strand Name
chr2_2 gene 44980428 44986829 44980428 ID=Msa0253290;Name=Msa0253290
chr2_2 mRNA 44980428 44986829 44980428 ID=Msa0253290-mRNA-1;Parent=Msa0253290;Name=Msa0253290-mRNA-1;_AED=0.08;_eAED=0.08;_QI=888|0.85|1|1|1|1|8|492|535
chr2_2 exon 44980428 44981642 44980428 ID=Msa0253290-mRNA-1:exon:13842;Parent=Msa0253290-mRNA-1
chr2_2 exon 44982292 44982421 44982292 ID=Msa0253290-mRNA-1:exon:13843;Parent=Msa0253290-mRNA-1
chr2_2 exon 44983818 44984311 44983818 ID=Msa0253290-mRNA-1:exon:13844;Parent=Msa0253290-mRNA-1
chr2_2 exon 44984679 44984759 44984679 ID=Msa0253290-mRNA-1:exon:13845;Parent=Msa0253290-mRNA-1
chr2_2 exon 44984906 44985010 44984906 ID=Msa0253290-mRNA-1:exon:13846;Parent=Msa0253290-mRNA-1
chr2_2 exon 44985230 44985343 44985230 ID=Msa0253290-mRNA-1:exon:13847;Parent=Msa0253290-mRNA-1
chr2_2 exon 44985451 44985534 44985451 ID=Msa0253290-mRNA-1:exon:13848;Parent=Msa0253290-mRNA-1
chr2_2 exon 44986065 44986829 44986065 ID=Msa0253290-mRNA-1:exon:13849;Parent=Msa0253290-mRNA-1
chr2_2 five_prime_UTR 44980428 44981315 44980428 ID=Msa0253290-mRNA-1:five_prime_utr;Parent=Msa0253290-mRNA-1
chr2_2 CDS 44981316 44981642 44981316 ID=Msa0253290-mRNA-1:cds;Parent=Msa0253290-mRNA-1
chr2_2 CDS 44982292 44982421 44982292 ID=Msa0253290-mRNA-1:cds;Parent=Msa0253290-mRNA-1
chr2_2 CDS 44983818 44984311 44983818 ID=Msa0253290-mRNA-1:cds;Parent=Msa0253290-mRNA-1
chr2_2 CDS 44984679 44984759 44984679 ID=Msa0253290-mRNA-1:cds;Parent=Msa0253290-mRNA-1
chr2_2 CDS 44984906 44985010 44984906 ID=Msa0253290-mRNA-1:cds;Parent=Msa0253290-mRNA-1
chr2_2 CDS 44985230 44985343 44985230 ID=Msa0253290-mRNA-1:cds;Parent=Msa0253290-mRNA-1
chr2_2 CDS 44985451 44985534 44985451 ID=Msa0253290-mRNA-1:cds;Parent=Msa0253290-mRNA-1
chr2_2 CDS 44986065 44986337 44986065 ID=Msa0253290-mRNA-1:cds;Parent=Msa0253290-mRNA-1
chr2_2 three_prime_UTR 44986338 44986829 44986338 ID=Msa0253290-mRNA-1:three_prime_utr;Parent=Msa0253290-mRNA-1
Gene Sequence

>Msa0253290

ATGGTGATGGAGGATATAGGGTTGTTCAATCAAGTTTGGGGATGGCTTCGGTCACGAAAAGATGCCTGTTGGCGTGCTCGAACTGTGGTGTTTTGTTGTAGAGACAAAACTGCGATGTTTATTGAACGGCATTGGCCGATGGTATGCAGGGGTTGCTCGAAATTGGGGAGCTTACTTACATTATCTTTGATTTTTTGGAAGGACTCTGCTGTAAGGGGGTTTCAGTCTTTCATTAAGTTTGGTTCAGTGATGCTCTTGCTTATAATGTGGAGCTGCTTTCTTAGTCTGACTTCGATGTATTGCTTGGTTTACGTGCTTGTTAGTATGGTTACTGCTGGGGTTGCTGTCCAATACTTGGGTTATACTCCTGGGCTTTTTATCGTAGGGCTTTTTGCTATCCTTATTTTGTGGATGTATGCCAACTTTCTGATCACAGGATTACTACTCATAGTTGGAGGTTGCTTGTTTTCCCTAAATCGTGCACGCTTGGTGGTATTAATTGGAACCGCATATGCTATGTATTCTGTTCAAGTAAAAGTGGGATGGCTTGGCGTTTTCCTTGCCATAAACCTTGCATTTCTTTCAAATGACATTTTGAATTTTCTGCTTCAATGGTTTGATAATGTGAGTGAAAGTTTGCATCCTGAAGAGCAGAAGCAATCGGAGACAGTTATGGAAGACGACTTCGCTGAAGAGTGTGAATATCCTATCCCACCAGTTGAATCTGAGAATTTGCATTCATGCAAATCATCCAGTAAACCACCTGCTGTCACCACATCAGTTGTTGATAAGCAGAAAGAAATTTTGGTTACCAAAGTTGTAAAAGAGCAGACAAATTCAATTGATGAAATGAGAAGGATATTGAAGAGTCTTAATCATTATGATGCCCTTGGATTTAGCCGCCACAAAAAGATTGATGCAGCAGTTTTGAAAAAGGAATACCGGAAAAAGGCTATGCTCGTGCATCCTGATAAAAATATGGGCAGTTCTATGTCAAGCGAGTCATTCAAGAAACTTCAATGTGCATATGAGGTTCTTTCTGACTCTGTGAAGAAGCGAGACTATGATGAACAATTAAGAAAAGAAGAATCCATGGCTAAAAGCGTGTGCCAGAAATCCCACAGCAGTTCACATCAGGATAATACTGAATATCGTTCCGAAGAATCCAGACGGATACAGTGCACAAAGTGCGGTAATTCACATGTTTGGGTATGCACTAACAGGAGCAAGGCCAAAGCAAGATGGTGTCAGGATTGCTGTCAGTTTCATCAAGCAAAGGATGGAGATGGATGGGTTGAATATAAGGGATCTTTGGTTTTTGACAGGACTCAAAAAGGAATGGCTTGTAGGCCTAACACCCACCGACCGAGCTTCCATGTAAACATGGTTGGCTTGGAGAAAAGCCATTCCTGTAACTCAAGTAGATTCCCATGGGATTTGGACGCCGAAATGATGATGGATGAAGACGAAGAGGCATTTGACCTGTGGCTTCAACAGGCTTTAGCATCTGGTCTCTTTTGCGAGTCCTCAAAACGCAGGAAGAGTTGGAGTCCATTCAAATTGCCTCAAAAGAAAGGGAAAAAGCAATGGCGAAGAACGTCTTGCTGA

Protein sequence

>Msa0253290

MVMEDIGLFNQVWGWLRSRKDACWRARTVVFCCRDKTAMFIERHWPMVCRGCSKLGSLLTLSLIFWKDSAVRGFQSFIKFGSVMLLLIMWSCFLSLTSMYCLVYVLVSMVTAGVAVQYLGYTPGLFIVGLFAILILWMYANFLITGLLLIVGGCLFSLNRARLVVLIGTAYAMYSVQVKVGWLGVFLAINLAFLSNDILNFLLQWFDNVSESLHPEEQKQSETVMEDDFAEECEYPIPPVESENLHSCKSSSKPPAVTTSVVDKQKEILVTKVVKEQTNSIDEMRRILKSLNHYDALGFSRHKKIDAAVLKKEYRKKAMLVHPDKNMGSSMSSESFKKLQCAYEVLSDSVKKRDYDEQLRKEESMAKSVCQKSHSSSHQDNTEYRSEESRRIQCTKCGNSHVWVCTNRSKAKARWCQDCCQFHQAKDGDGWVEYKGSLVFDRTQKGMACRPNTHRPSFHVNMVGLEKSHSCNSSRFPWDLDAEMMMDEDEEAFDLWLQQALASGLFCESSKRRKSWSPFKLPQKKGKKQWRRTSC*