AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0414070

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0414070 MtrunA17_Chr3g0106921 96.562 320 11 0 1 320 1 320 0.0 637
Msa0414070 MtrunA17_Chr5g0432441 72.327 318 87 1 4 320 9 326 5.54e-170 474
Msa0414070 MtrunA17_Chr5g0438021 69.256 309 94 1 12 320 18 325 3.09e-160 450
Msa0414070 MtrunA17_Chr3g0129051 67.197 314 102 1 7 320 10 322 1.12e-154 436
Msa0414070 MtrunA17_Chr3g0129061 67.197 314 102 1 7 320 10 322 1.65e-153 432
Msa0414070 MtrunA17_Chr3g0129041 67.197 314 102 1 7 320 10 322 6.44e-150 424
Msa0414070 MtrunA17_Chr2g0320091 58.125 320 132 2 1 320 1 318 1.12e-133 382
Msa0414070 MtrunA17_Chr2g0320071 55.937 320 138 2 1 320 1 317 6.68e-130 373
Msa0414070 MtrunA17_Chr3g0114451 59.494 316 118 3 12 320 6 318 9.49e-130 372
Msa0414070 MtrunA17_Chr2g0320101 55.625 320 139 2 1 320 1 317 1.71e-128 369
Msa0414070 MtrunA17_Chr7g0244451 56.962 316 133 2 5 320 4 316 2.18e-127 366
Msa0414070 MtrunA17_Chr2g0320061 56.698 321 135 4 1 320 1 318 2.39e-127 366
Msa0414070 MtrunA17_Chr4g0038151 57.143 315 130 4 10 320 8 321 3.92e-127 366
Msa0414070 MtrunA17_Chr4g0013201 56.090 312 133 3 10 320 30 338 7.65e-127 366
Msa0414070 MtrunA17_Chr7g0244461 54.808 312 138 2 9 320 4 312 7.72e-126 362
Msa0414070 MtrunA17_Chr4g0038161 56.688 314 132 4 10 320 8 320 2.43e-125 361
Msa0414070 MtrunA17_Chr4g0043391 56.790 324 133 5 3 320 2 324 7.06e-125 360
Msa0414070 MtrunA17_Chr4g0038171 57.729 317 128 5 7 320 8 321 3.31e-124 358
Msa0414070 MtrunA17_Chr2g0320051 54.829 321 141 3 1 320 1 318 6.35e-124 357
Msa0414070 MtrunA17_Chr4g0013171 58.599 314 126 3 8 320 11 321 1.05e-123 357
Msa0414070 MtrunA17_Chr4g0013191 56.066 305 132 2 17 320 37 340 1.84e-122 355
Msa0414070 MtrunA17_Chr2g0320031 54.430 316 138 5 8 320 7 319 1.18e-119 347
Msa0414070 MtrunA17_Chr4g0013181 59.524 294 116 2 28 320 62 353 5.91e-119 346
Msa0414070 MtrunA17_Chr3g0106901 56.190 315 135 2 6 320 12 323 1.04e-116 339
Msa0414070 MtrunA17_Chr5g0432341 55.000 320 134 8 7 320 6 321 3.68e-116 338
Msa0414070 MtrunA17_Chr1g0213061 53.943 317 138 5 8 320 9 321 4.09e-116 338
Msa0414070 MtrunA17_Chr5g0432351 54.688 320 135 8 7 320 6 321 4.20e-116 338
Msa0414070 MtrunA17_Chr7g0224371 53.968 315 139 5 8 320 12 322 5.16e-116 338
Msa0414070 MtrunA17_Chr5g0432331 55.987 309 127 7 17 320 48 352 2.61e-114 334
Msa0414070 MtrunA17_Chr3g0107881 51.393 323 149 6 3 320 5 324 7.86e-111 325
Msa0414070 MtrunA17_Chr7g0258811 50.000 328 150 7 4 320 47 371 8.79e-105 311
Msa0414070 MtrunA17_Chr5g0404721 50.329 304 140 4 25 320 30 330 1.55e-102 303
Msa0414070 MtrunA17_Chr8g0372601 50.987 304 138 4 25 320 30 330 1.66e-102 303
Msa0414070 MtrunA17_Chr1g0175561 48.750 320 151 6 11 320 10 326 9.62e-101 299
Msa0414070 MtrunA17_Chr1g0155611 51.475 305 136 4 25 320 46 347 7.89e-100 297
Msa0414070 MtrunA17_Chr5g0402571 47.188 320 159 3 8 320 10 326 1.00e-98 294
Msa0414070 MtrunA17_Chr4g0070951 49.383 324 148 6 8 320 11 329 2.88e-98 293
Msa0414070 MtrunA17_Chr2g0299691 51.282 312 133 6 22 320 53 358 3.59e-98 293
Msa0414070 MtrunA17_Chr5g0402581 45.938 320 163 3 8 320 10 326 9.08e-97 289
Msa0414070 MtrunA17_Chr5g0432401 50.000 326 111 9 1 317 1 283 1.27e-96 287
Msa0414070 MtrunA17_Chr2g0292251 48.387 310 148 4 20 320 23 329 3.95e-96 288
Msa0414070 MtrunA17_Chr2g0291751 50.162 309 142 5 21 320 25 330 1.52e-95 286
Msa0414070 MtrunA17_Chr2g0292101 47.170 318 156 4 12 320 12 326 2.50e-95 286
Msa0414070 MtrunA17_Chr5g0400331 49.038 312 143 4 22 320 23 331 2.58e-95 285
Msa0414070 MtrunA17_Chr2g0292181 48.148 324 152 5 10 320 19 339 2.59e-95 286
Msa0414070 MtrunA17_Chr2g0292151 47.531 324 154 6 10 320 10 330 5.72e-95 285
Msa0414070 MtrunA17_Chr4g0068621 48.667 300 149 3 25 320 38 336 9.49e-95 284
Msa0414070 MtrunA17_Chr2g0292211 47.077 325 156 5 9 320 20 341 2.10e-94 284
Msa0414070 MtrunA17_Chr2g0292271 47.500 320 153 5 13 320 14 330 2.38e-94 283
Msa0414070 MtrunA17_Chr2g0292261 47.706 327 155 5 7 320 7 330 2.62e-93 281
Msa0414070 MtrunA17_Chr2g0292091 46.178 314 157 5 16 320 15 325 3.55e-93 280
Msa0414070 MtrunA17_Chr2g0292241 46.154 325 159 5 9 320 9 330 9.83e-93 280
Msa0414070 MtrunA17_Chr4g0013821 46.580 307 151 5 21 320 24 324 2.86e-92 278
Msa0414070 MtrunA17_Chr4g0013721 45.806 310 155 5 18 320 93 396 1.70e-90 276
Msa0414070 MtrunA17_Chr2g0292111 45.679 324 160 6 10 320 10 330 1.96e-89 271
Msa0414070 MtrunA17_Chr5g0421411 48.276 290 131 6 45 320 1 285 3.45e-88 265
Msa0414070 MtrunA17_Chr2g0292291 45.062 324 163 5 10 320 11 332 5.10e-88 267
Msa0414070 MtrunA17_Chr1g0204011 40.122 329 181 6 1 320 1 322 9.82e-84 255
Msa0414070 MtrunA17_Chr2g0322861 43.478 322 168 7 8 320 70 386 1.07e-82 255
Msa0414070 MtrunA17_Chr1g0188431 41.745 321 170 6 9 320 15 327 2.58e-80 247
Msa0414070 MtrunA17_Chr6g0477071 42.434 304 166 5 18 320 47 342 4.25e-80 247
Msa0414070 MtrunA17_Chr4g0024121 41.692 331 177 7 1 320 1 326 4.45e-80 246
Msa0414070 MtrunA17_Chr5g0405991 40.498 321 174 8 7 320 6 316 5.31e-76 235
Msa0414070 MtrunA17_Chr3g0128061 39.938 323 183 4 6 320 7 326 1.21e-75 235
Msa0414070 MtrunA17_Chr7g0225221 39.628 323 175 6 8 320 8 320 1.41e-75 234
Msa0414070 MtrunA17_Chr1g0194151 40.909 330 182 5 3 320 5 333 1.85e-75 234
Msa0414070 MtrunA17_Chr1g0157051 40.000 315 174 6 9 316 8 314 2.05e-74 231
Msa0414070 MtrunA17_Chr8g0371381 41.914 303 160 7 25 320 26 319 4.09e-74 231
Msa0414070 MtrunA17_Chr6g0467161 42.901 324 167 7 8 320 20 336 4.06e-73 229
Msa0414070 MtrunA17_Chr2g0279041 40.240 333 178 7 1 320 1 325 1.19e-71 224
Msa0414070 MtrunA17_Chr1g0194271 39.941 338 181 7 3 320 5 340 2.20e-71 224
Msa0414070 MtrunA17_Chr2g0296621 40.789 304 160 6 25 320 50 341 3.56e-71 224
Msa0414070 MtrunA17_Chr4g0063671 40.432 324 173 7 9 320 5 320 1.51e-69 219
Msa0414070 MtrunA17_Chr6g0460711 38.535 314 187 4 9 320 5 314 3.38e-68 216
Msa0414070 MtrunA17_Chr4g0076211 39.465 299 162 6 30 320 46 333 1.50e-67 214
Msa0414070 MtrunA17_Chr7g0254231 40.268 298 168 5 25 320 22 311 1.60e-67 214
Msa0414070 MtrunA17_Chr1g0197411 38.438 320 184 6 11 320 14 330 2.66e-67 214
Msa0414070 MtrunA17_Chr7g0254201 39.274 303 171 4 23 320 18 312 1.01e-66 211
Msa0414070 MtrunA17_Chr1g0164891 40.397 302 168 5 29 320 93 392 2.09e-66 213
Msa0414070 MtrunA17_Chr3g0114461 55.497 191 81 3 131 320 5 192 3.88e-66 206
Msa0414070 MtrunA17_Chr4g0046131 39.640 333 173 8 9 316 13 342 8.48e-65 207
Msa0414070 MtrunA17_Chr1g0181511 36.213 301 187 4 23 320 25 323 3.48e-64 205
Msa0414070 MtrunA17_Chr2g0316481 36.826 334 172 7 23 319 74 405 3.70e-64 208
Msa0414070 MtrunA17_Chr2g0316191 37.015 335 171 7 23 319 74 406 4.18e-64 207
Msa0414070 MtrunA17_Chr4g0075241 34.483 319 202 3 7 320 11 327 4.42e-64 205
Msa0414070 MtrunA17_Chr5g0401431 37.500 320 183 7 9 316 11 325 6.02e-64 205
Msa0414070 MtrunA17_Chr7g0268501 37.072 321 185 8 9 320 8 320 1.76e-63 203
Msa0414070 MtrunA17_Chr7g0268521 37.072 321 185 8 9 320 8 320 1.76e-63 203
Msa0414070 MtrunA17_Chr2g0316791 36.527 334 173 7 23 319 74 405 1.76e-63 206
Msa0414070 MtrunA17_Chr1g0181431 35.880 301 188 4 23 320 25 323 5.83e-63 202
Msa0414070 MtrunA17_Chr2g0278671 40.000 315 169 7 18 320 17 323 6.21e-63 202
Msa0414070 MtrunA17_Chr6g0467251 37.152 323 188 5 8 320 11 328 1.22e-62 202
Msa0414070 MtrunA17_Chr4g0072091 39.482 309 167 7 24 320 23 323 2.07e-62 201
Msa0414070 MtrunA17_Chr8g0364291 37.152 323 191 5 7 320 5 324 4.82e-62 200
Msa0414070 MtrunA17_Chr2g0316831 36.228 334 174 7 23 319 110 441 5.42e-62 203
Msa0414070 MtrunA17_Chr1g0148021 37.037 324 186 8 9 320 11 328 1.30e-61 199
Msa0414070 MtrunA17_Chr4g0053871 37.460 315 185 7 12 319 14 323 4.53e-61 197
Msa0414070 MtrunA17_Chr6g0467121 39.465 299 169 7 25 320 74 363 5.09e-61 199
Msa0414070 MtrunA17_Chr1g0181481 35.548 301 189 4 23 320 25 323 1.18e-60 196
Msa0414070 MtrunA17_Chr3g0136751 33.739 329 202 4 1 320 1 322 5.70e-60 194
Msa0414070 MtrunA17_Chr6g0451571 34.405 311 193 6 18 320 27 334 9.96e-59 192
Msa0414070 MtrunA17_Chr2g0311251 35.988 339 161 9 23 316 9 336 1.01e-57 189
Msa0414070 MtrunA17_Chr2g0279061 41.445 263 135 6 69 320 12 266 3.63e-57 185
Msa0414070 MtrunA17_Chr2g0329641 33.131 329 197 5 9 320 13 335 6.17e-57 187
Msa0414070 MtrunA17_Chr2g0311241 32.796 372 169 9 23 316 58 426 1.15e-56 189
Msa0414070 MtrunA17_Chr4g0074851 32.923 325 204 7 4 316 2 324 2.41e-55 183
Msa0414070 MtrunA17_Chr5g0413051 35.144 313 190 7 19 320 67 377 9.85e-54 180
Msa0414070 MtrunA17_Chr3g0114491 66.364 110 37 0 24 133 17 126 1.79e-45 151
Msa0414070 MtrunA17_Chr2g0292281 41.784 213 102 4 117 320 17 216 3.97e-45 154
Msa0414070 MtrunA17_Chr2g0316811 45.029 171 90 3 23 191 48 216 8.84e-45 155
Msa0414070 MtrunA17_Chr2g0316141 36.059 269 150 7 71 319 11 277 2.11e-43 150
Msa0414070 MtrunA17_Chr2g0316181 36.059 269 150 7 71 319 11 277 2.11e-43 150
Msa0414070 MtrunA17_Chr4g0004591 29.022 317 159 5 25 316 77 352 2.10e-42 150
Msa0414070 MtrunA17_Chr5g0432321 55.833 120 49 3 146 265 17 132 5.50e-35 124
Msa0414070 MtrunA17_Chr1g0181501 32.804 189 122 4 135 320 3 189 9.39e-30 112
Msa0414070 MtrunA17_Chr5g0432361 54.167 96 41 2 224 317 12 106 1.31e-27 103
Msa0414070 MtrunA17_Chr3g0104101 39.041 146 69 6 190 320 9 149 2.48e-21 88.6
Msa0414070 MtrunA17_Chr6g0468731 59.722 72 25 2 64 135 22 89 8.37e-21 85.1
Msa0414070 MtrunA17_Chr1g0181491 37.168 113 69 2 23 135 10 120 3.01e-19 82.8
Msa0414070 MtrunA17_Chr7g0254181 43.000 100 53 1 93 192 27 122 9.99e-19 81.6
Msa0414070 MtrunA17_Chr4g0013811 50.000 74 36 1 136 209 6 78 1.41e-18 79.0
Msa0414070 MtrunA17_Chr3g0137751 28.682 258 116 10 57 299 106 310 1.71e-18 84.3
Msa0414070 MtrunA17_Chr2g0316771 27.473 182 97 3 173 319 4 185 6.21e-13 66.6
Msa0414070 MtrunA17_Chr1g0196191 50.000 66 32 1 67 132 27 91 3.88e-12 63.5
Msa0414070 MtrunA17_Chr7g0254171 41.667 72 41 1 71 142 4 74 2.12e-11 60.8
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0414070 AT5G58400.1 64.968 314 110 0 7 320 12 325 4.14e-153 432
Msa0414070 AT5G05340.1 68.792 298 92 1 23 320 28 324 8.68e-153 431
Msa0414070 AT5G58390.1 66.026 312 106 0 9 320 5 316 1.88e-149 422
Msa0414070 AT1G14550.1 53.185 314 141 5 11 320 10 321 5.01e-114 333
Msa0414070 AT1G14540.1 50.321 312 150 4 11 320 7 315 1.07e-106 314
Msa0414070 AT5G06720.1 47.962 319 154 4 11 320 18 333 2.83e-103 306
Msa0414070 AT4G36430.1 49.020 306 145 4 23 320 28 330 4.19e-103 305
Msa0414070 AT5G06730.1 47.962 319 154 5 11 320 19 334 6.17e-102 303
Msa0414070 AT1G44970.1 49.196 311 146 4 19 320 39 346 6.28e-102 303
Msa0414070 AT2G18150.1 45.723 339 162 5 1 320 1 336 6.65e-102 303
Msa0414070 AT5G66390.1 48.052 308 149 4 21 320 29 333 7.49e-102 302
Msa0414070 AT3G50990.1 48.867 309 147 5 20 320 36 341 4.10e-100 298
Msa0414070 AT2G18140.1 46.945 311 154 4 18 320 28 335 8.05e-98 292
Msa0414070 AT2G38390.1 47.988 323 153 7 10 320 14 333 1.83e-95 286
Msa0414070 AT2G35380.1 46.667 330 156 6 8 320 9 335 2.65e-95 286
Msa0414070 AT4G16270.1 50.000 302 134 6 29 320 54 348 7.78e-95 285
Msa0414070 AT1G68850.1 42.090 335 166 6 11 320 4 335 2.90e-93 281
Msa0414070 AT1G49570.1 49.013 304 144 4 22 316 45 346 7.44e-93 280
Msa0414070 AT3G32980.1 47.267 311 150 5 21 320 27 334 8.09e-93 280
Msa0414070 AT2G38380.1 47.368 323 155 7 10 320 14 333 3.67e-92 278
Msa0414070 AT4G08780.1 46.497 314 154 5 18 320 17 327 4.73e-92 278
Msa0414070 AT4G08770.1 47.452 314 151 5 18 320 17 327 8.15e-92 277
Msa0414070 AT5G19890.1 46.605 324 150 7 11 320 13 327 1.18e-89 271
Msa0414070 AT2G22420.1 43.438 320 168 5 8 320 6 319 1.77e-87 266
Msa0414070 AT3G49110.1 44.969 318 161 5 14 320 22 336 9.75e-86 262
Msa0414070 AT3G49120.1 44.272 323 166 5 9 320 16 335 1.04e-85 262
Msa0414070 AT5G19880.1 43.653 323 166 6 11 320 10 329 2.40e-85 260
Msa0414070 AT5G51890.1 41.768 328 177 6 1 320 1 322 8.85e-83 253
Msa0414070 AT3G01190.1 42.249 329 173 7 1 320 1 321 2.10e-81 250
Msa0414070 AT4G33420.1 43.770 313 165 6 11 320 21 325 4.97e-81 249
Msa0414070 AT4G33420.2 43.770 313 165 6 11 320 68 372 2.09e-80 249
Msa0414070 AT1G05260.1 43.210 324 167 8 9 320 7 325 1.01e-78 243
Msa0414070 AT4G11290.1 41.049 324 176 6 9 320 6 326 1.06e-77 240
Msa0414070 AT5G17820.1 40.810 321 168 7 8 320 7 313 6.96e-77 238
Msa0414070 AT5G17820.2 40.810 321 168 7 8 320 60 366 5.99e-76 237
Msa0414070 AT5G14130.1 38.365 318 181 5 12 320 19 330 4.57e-74 231
Msa0414070 AT3G03670.1 39.506 324 179 5 7 320 5 321 4.88e-74 231
Msa0414070 AT5G15180.1 39.571 326 177 8 8 320 11 329 6.41e-74 231
Msa0414070 AT5G14130.2 38.365 318 181 5 12 320 60 371 2.06e-73 231
Msa0414070 AT5G42180.1 41.083 314 170 7 11 317 9 314 3.07e-73 229
Msa0414070 AT2G35380.2 49.798 247 108 5 87 320 4 247 3.37e-73 226
Msa0414070 AT3G21770.1 41.424 309 167 7 17 316 21 324 3.35e-72 226
Msa0414070 AT5G64120.1 40.134 299 163 6 29 320 39 328 6.85e-72 226
Msa0414070 AT1G71695.1 40.803 299 171 4 25 320 44 339 1.28e-71 226
Msa0414070 AT2G41480.1 39.450 327 176 8 8 320 10 328 4.84e-71 223
Msa0414070 AT4G26010.1 39.557 316 180 5 7 320 3 309 2.83e-69 218
Msa0414070 AT1G30870.1 40.523 306 161 6 25 320 51 345 6.23e-69 219
Msa0414070 AT4G26010.2 38.941 321 185 5 2 320 26 337 6.92e-69 218
Msa0414070 AT1G05240.1 38.411 302 170 6 25 316 26 321 7.55e-69 218
Msa0414070 AT1G05250.1 38.411 302 170 6 25 316 26 321 7.55e-69 218
Msa0414070 AT5G40150.1 36.304 303 188 4 21 320 28 328 3.26e-67 214
Msa0414070 AT3G28200.1 35.974 303 190 4 20 320 16 316 7.87e-67 212
Msa0414070 AT1G77100.1 41.176 323 172 9 9 320 4 319 9.67e-67 212
Msa0414070 AT1G34510.1 38.978 313 180 7 10 320 6 309 2.69e-66 211
Msa0414070 AT5G67400.1 38.629 321 180 7 12 320 14 329 6.94e-66 210
Msa0414070 AT5G39580.1 39.375 320 177 8 10 320 8 319 1.34e-65 209
Msa0414070 AT4G37530.1 38.217 314 179 6 18 320 20 329 3.17e-65 209
Msa0414070 AT4G17690.1 38.000 300 179 5 25 320 26 322 1.27e-64 207
Msa0414070 AT5G47000.1 37.975 316 186 6 11 320 19 330 2.02e-64 207
Msa0414070 AT4G31760.1 36.111 324 191 5 6 320 10 326 2.43e-64 206
Msa0414070 AT4G25980.1 38.154 325 180 7 9 320 10 326 3.65e-64 206
Msa0414070 AT2G18980.1 39.450 327 174 9 7 320 8 323 1.13e-63 204
Msa0414070 AT2G24800.1 35.505 307 183 5 23 320 29 329 2.53e-62 201
Msa0414070 AT3G49960.1 37.695 321 183 8 12 320 14 329 2.94e-62 201
Msa0414070 AT4G37520.1 38.387 310 174 7 23 320 25 329 6.38e-62 200
Msa0414070 AT1G24110.1 37.578 322 183 8 12 320 6 322 1.08e-60 197
Msa0414070 AT2G34060.1 39.542 306 170 7 24 317 41 343 1.14e-60 197
Msa0414070 AT2G37130.1 36.634 303 182 6 24 320 29 327 1.80e-60 196
Msa0414070 AT4G30170.1 37.942 311 172 6 22 320 24 325 3.85e-60 195
Msa0414070 AT4G37520.2 38.065 310 172 8 23 320 25 326 4.56e-60 195
Msa0414070 AT4G33870.1 31.325 332 186 5 25 316 68 397 5.03e-60 197
Msa0414070 AT2G37130.2 36.364 297 183 5 28 320 2 296 5.14e-60 194
Msa0414070 AT5G64100.1 33.626 342 194 7 1 320 1 331 4.04e-57 187
Msa0414070 AT5G64110.1 35.976 328 183 7 11 320 12 330 1.53e-56 186
Msa0414070 AT4G37530.2 39.924 263 143 6 18 269 20 278 2.98e-55 181
Msa0414070 AT2G39040.1 36.741 313 185 7 19 320 40 350 2.31e-54 181
Msa0414070 AT4G21960.1 32.808 317 202 5 9 316 9 323 3.72e-54 180
Msa0414070 AT5G22410.1 36.808 307 172 9 24 318 27 323 2.13e-53 178
Msa0414070 AT2G43480.1 32.808 317 194 5 16 320 26 335 5.46e-52 174
Msa0414070 AT5G24070.1 32.686 309 189 6 24 320 34 335 6.26e-51 172
Msa0414070 AT3G17070.1 31.962 316 203 4 12 316 21 335 9.77e-49 166
Msa0414070 AT4G25980.2 44.324 185 98 3 9 193 55 234 5.74e-45 155
Msa0414070 AT5G39580.2 39.726 219 120 5 10 226 8 216 2.45e-42 146
Msa0414070 AT2G24800.2 40.828 169 95 2 23 191 29 192 1.15e-37 134
Msa0414070 AT3G17070.2 29.885 261 174 4 67 320 18 276 6.14e-35 128
Msa0414070 AT4G32320.1 29.032 279 128 8 36 299 96 319 1.88e-19 87.8
Msa0414070 AT3G42570.1 30.693 101 70 0 93 193 49 149 2.42e-13 67.0

Find 70 sgRNAs with CRISPR-Local

Find 248 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TCCCCTTGTTTCCCAGTTAA+AGG 0.132682 3_2:-59029994 None:intergenic
TTCTTATATTGCATTGCTTT+TGG 0.227972 3_2:+59025068 Msa0414070:CDS
TCTAGCTTCACTTGAAAATA+TGG 0.240068 3_2:+59025032 Msa0414070:exon
TCTCCTGAGCCACTTGTTCT+AGG 0.244890 3_2:-59029760 None:intergenic
TCACAAGGGTTGATGTATTA+TGG 0.263654 3_2:+59030152 Msa0414070:three_prime_UTR
TTAAACCTAAAATTGTATTA+TGG 0.279124 3_2:+59030229 Msa0414070:three_prime_UTR
AAGGACATGGTTGCTTTATC+TGG 0.280172 3_2:+59028707 Msa0414070:CDS
GGAGATAATAAGCCTTTAAC+TGG 0.288260 3_2:+59029982 Msa0414070:CDS
AGCAATGCAATATAAGAATT+AGG 0.345453 3_2:-59025063 None:intergenic
TTGTAGGAGCTTGAATTAGA+AGG 0.346405 3_2:+59030029 Msa0414070:exon
CTGGGAAACAAGGGGAGATT+AGG 0.373206 3_2:+59030001 Msa0414070:CDS
AATTGATGCTATAAAATCTA+AGG 0.374906 3_2:+59027306 Msa0414070:CDS
CCTCTCACAGAATTGTTGTT+AGG 0.375225 3_2:-59027274 None:intergenic
AAGTTGAGATAAGGTTGGTT+AGG 0.432446 3_2:-59028661 None:intergenic
TTTCAGGAGCTCACACAATA+GGG 0.432739 3_2:+59029650 Msa0414070:intron
GGGAGATTAGGAAGAATTGT+AGG 0.435594 3_2:+59030013 Msa0414070:CDS
CTCCTGAGCCACTTGTTCTA+GGG 0.446044 3_2:-59029759 None:intergenic
GAGCTTTAAAAGTTGAGATA+AGG 0.452562 3_2:-59028670 None:intergenic
TTCTTCAAGTTAAAATATAG+TGG 0.452601 3_2:+59030096 Msa0414070:three_prime_UTR
ACAGTACATTTGCTAAGATA+AGG 0.454514 3_2:+59029725 Msa0414070:CDS
AGGTTGGTTAGGTTAGATGT+AGG 0.468281 3_2:-59028650 None:intergenic
TGCCCTAGAACAAGTGGCTC+AGG 0.473241 3_2:+59029757 Msa0414070:CDS
TGTAGCTGGAATGATTAAGA+TGG 0.477613 3_2:+59029960 Msa0414070:CDS
GTTAGGTTAGATGTAGGAGC+TGG 0.487957 3_2:-59028644 None:intergenic
AACAGAGTCACGAGCTGTAA+TGG 0.488480 3_2:-59027374 None:intergenic
AATTTCACTGCTGCAAACAC+TGG 0.493527 3_2:+59028614 Msa0414070:CDS
GTAGCTGGAATGATTAAGAT+GGG 0.493735 3_2:+59029961 Msa0414070:CDS
AAAACAAAATAGGGTTGTGA+TGG 0.494547 3_2:+59027199 Msa0414070:intron
AAGAATCTCATTATCAAAAG+AGG 0.495616 3_2:+59029841 Msa0414070:CDS
AAGCCTTTAACTGGGAAACA+AGG 0.501073 3_2:+59029991 Msa0414070:CDS
TTTAAAAGTTGAGATAAGGT+TGG 0.503940 3_2:-59028666 None:intergenic
AGATAAAGCAACCATGTCCT+TGG 0.505640 3_2:-59028705 None:intergenic
ATTTCACTGCTGCAAACACT+GGG 0.508356 3_2:+59028615 Msa0414070:CDS
CTGAAGAAGTCCCTATAAGA+AGG 0.508590 3_2:-59025095 None:intergenic
GATGACACTTCGTCCTTCAA+AGG 0.509796 3_2:+59027235 Msa0414070:CDS
TATTATGGATATGTATAAAG+TGG 0.517370 3_2:+59030167 Msa0414070:three_prime_UTR
TCTGATCAAGTACTCTTCAA+TGG 0.517394 3_2:+59029874 Msa0414070:CDS
TCAGCACATGAGACCACACC+AGG 0.521560 3_2:-59027343 None:intergenic
AGTGAAGCTAGAGAAGAAGA+TGG 0.531239 3_2:-59025021 None:intergenic
AGGACTTTCTGCCAAGGACA+TGG 0.532504 3_2:+59028694 Msa0414070:CDS
TGTAGGAGCTTGAATTAGAA+GGG 0.535801 3_2:+59030030 Msa0414070:exon
TAATTGTTGTCAAAATGAGT+TGG 0.542091 3_2:-59029814 None:intergenic
AACTTATAGCCAGAATGAAA+AGG 0.543850 3_2:+59029921 Msa0414070:CDS
TGTTGCTGTCGTTGTATATG+TGG 0.550869 3_2:-59029699 None:intergenic
AGCTACAAAATCAGAATCAA+AGG 0.554610 3_2:-59029944 None:intergenic
GGTCTCATGTGCTGATATAG+TGG 0.564157 3_2:+59027351 Msa0414070:CDS
TGAAATAAATTATCATCACA+AGG 0.568019 3_2:+59030137 Msa0414070:three_prime_UTR
GCAAGGTGTACAAGTTTCAG+AGG 0.574999 3_2:+59029676 Msa0414070:CDS
GTGAAGCTAGAGAAGAAGAT+GGG 0.576984 3_2:-59025020 None:intergenic
AGCCTTTAACTGGGAAACAA+GGG 0.580782 3_2:+59029992 Msa0414070:CDS
ATGGATATGTATAAAGTGGA+AGG 0.581463 3_2:+59030171 Msa0414070:three_prime_UTR
AAGAACTGCCCTAGAACAAG+TGG 0.582954 3_2:+59029751 Msa0414070:CDS
CTCACACAATAGGGAGAGCA+AGG 0.588677 3_2:+59029659 Msa0414070:CDS
AAACAAAATAGGGTTGTGAT+GGG 0.589771 3_2:+59027200 Msa0414070:intron
AAGGTGGAAGCAATATGCCC+TGG 0.603139 3_2:+59027325 Msa0414070:CDS
TGATGCTATAAAATCTAAGG+TGG 0.606554 3_2:+59027309 Msa0414070:CDS
AGTCGTGGAAGAAGAGACGA+AGG 0.608143 3_2:-59025227 None:intergenic
CCTAACAACAATTCTGTGAG+AGG 0.611912 3_2:+59027274 Msa0414070:CDS
AGCTCAAGGACTTTCTGCCA+AGG 0.614786 3_2:+59028688 Msa0414070:CDS
TTACATCAACAAAGCAGTCG+TGG 0.618609 3_2:-59025242 None:intergenic
AAGTTGGGAGAAGAGATTCA+AGG 0.621582 3_2:+59028585 Msa0414070:CDS
GCCTTTAACTGGGAAACAAG+GGG 0.634825 3_2:+59029993 Msa0414070:CDS
GAAATAAATTATCATCACAA+GGG 0.635034 3_2:+59030138 Msa0414070:three_prime_UTR
GATCAAGTACTCTTCAATGG+TGG 0.638235 3_2:+59029877 Msa0414070:CDS
GAGATAATAAGCCTTTAACT+GGG 0.654488 3_2:+59029983 Msa0414070:CDS
GTTGCCAAAGAAAATCGCAT+CGG 0.655320 3_2:+59025195 Msa0414070:CDS
GGAAGCAATATGCCCTGGTG+TGG 0.672684 3_2:+59027330 Msa0414070:CDS
GCAGTCTGTTGTTAAAACAG+CGG 0.680057 3_2:+59025173 Msa0414070:CDS
CAGCACATGAGACCACACCA+GGG 0.765626 3_2:-59027342 None:intergenic
TTTCACTGCTGCAAACACTG+GGG 0.769355 3_2:+59028616 Msa0414070:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AGAAAATAAACAATTAATTA+GGG - chr3_2:59025553-59025572 None:intergenic 10.0%
!! AAGAAAATAAACAATTAATT+AGG - chr3_2:59025554-59025573 None:intergenic 10.0%
!!! TAGTAAATAAATATTTTGAT+TGG - chr3_2:59026028-59026047 None:intergenic 10.0%
!!! TTTTTTTTTTTTTTGACAAA+AGG + chr3_2:59026414-59026433 Msa0414070:intron 10.0%
!!! TTATTTTAAGTTTCAAATAA+TGG - chr3_2:59028768-59028787 None:intergenic 10.0%
!!! GTATTTATTTGAAATAAAAA+TGG - chr3_2:59029138-59029157 None:intergenic 10.0%
!!! CTATATATGATCTTATTTTT+AGG + chr3_2:59025282-59025301 Msa0414070:intron 15.0%
!!! GTTTTATTTTTATCTTTCAA+TGG + chr3_2:59025304-59025323 Msa0414070:intron 15.0%
!! TACAATGAAAATTTATAGAT+AGG + chr3_2:59025843-59025862 Msa0414070:intron 15.0%
!! ACAATGAAAATTTATAGATA+GGG + chr3_2:59025844-59025863 Msa0414070:intron 15.0%
!! AAAAAAAATTATATGACGAT+CGG - chr3_2:59025875-59025894 None:intergenic 15.0%
!!! TTTTATTCTTTGAAATTTGA+AGG + chr3_2:59025935-59025954 Msa0414070:intron 15.0%
!!! TAAATAAATATTTTGATTGG+AGG - chr3_2:59026025-59026044 None:intergenic 15.0%
!!! TGATGATAGTTTTTAATTTA+AGG + chr3_2:59026191-59026210 Msa0414070:intron 15.0%
!!! GATGATAGTTTTTAATTTAA+GGG + chr3_2:59026192-59026211 Msa0414070:intron 15.0%
!!! AATGAATATTTTCATATCAT+AGG - chr3_2:59026917-59026936 None:intergenic 15.0%
!!! AAACATAATTGACAATTTTT+AGG + chr3_2:59027466-59027485 Msa0414070:intron 15.0%
!!! AACATAATTGACAATTTTTA+GGG + chr3_2:59027467-59027486 Msa0414070:intron 15.0%
!!! CTACACTTTTTATAAAATAA+TGG + chr3_2:59028483-59028502 Msa0414070:intron 15.0%
!! AAAATTATATGAATCTTTGA+CGG + chr3_2:59029365-59029384 Msa0414070:intron 15.0%
!! AAAATTATATGAATCTTTGA+CGG + chr3_2:59029365-59029384 Msa0414070:intron 15.0%
!! AAAAAAAAAACCTACAAATA+TGG + chr3_2:59029587-59029606 Msa0414070:intron 15.0%
!! AAAAAAAAACCTACAAATAT+GGG + chr3_2:59029588-59029607 Msa0414070:intron 15.0%
!! TTAAACCTAAAATTGTATTA+TGG + chr3_2:59030229-59030248 Msa0414070:three_prime_UTR 15.0%
!!! ATATTTTTTATTCATGACAC+AGG + chr3_2:59025363-59025382 Msa0414070:intron 20.0%
!!! ATCGTTATTTTTTTGCTTAT+TGG - chr3_2:59025432-59025451 None:intergenic 20.0%
!!! AAAGAAATTATCAGTTTTGT+GGG - chr3_2:59025468-59025487 None:intergenic 20.0%
!!! AAAAGAAATTATCAGTTTTG+TGG - chr3_2:59025469-59025488 None:intergenic 20.0%
!! AAAAAAATTATATGACGATC+GGG - chr3_2:59025874-59025893 None:intergenic 20.0%
!! CAAGCATAGAATATTTAAAA+TGG + chr3_2:59026138-59026157 Msa0414070:intron 20.0%
!!! TAAATGCTATTTCACAAATT+CGG + chr3_2:59026217-59026236 Msa0414070:intron 20.0%
!! CTCAAGTTATTGATATTTAT+AGG + chr3_2:59026590-59026609 Msa0414070:intron 20.0%
!! AACATGTAATAATCAAAACA+AGG - chr3_2:59026871-59026890 None:intergenic 20.0%
!!! ATTCAAAATATTTTGAAGTC+TGG - chr3_2:59027106-59027125 None:intergenic 20.0%
!! AATTGATGCTATAAAATCTA+AGG + chr3_2:59027306-59027325 Msa0414070:CDS 20.0%
!! ACTTATATAAAGTGTATGTT+TGG - chr3_2:59028134-59028153 None:intergenic 20.0%
!!! TTAATATGTATTTTGTAGCT+TGG + chr3_2:59028542-59028561 Msa0414070:intron 20.0%
!!! TTTCAAATAATGGAAGAAAA+AGG - chr3_2:59028758-59028777 None:intergenic 20.0%
!!! ATTTATCTTTTTGTCTCTTT+AGG + chr3_2:59028789-59028808 Msa0414070:intron 20.0%
!! ATAACTGCATAATTGTTATA+CGG + chr3_2:59028933-59028952 Msa0414070:intron 20.0%
!!! TTCTTTTTTTCTTAATTGCA+TGG - chr3_2:59029020-59029039 None:intergenic 20.0%
!! AAAAGAAAAAATAACTAGCA+AGG + chr3_2:59029194-59029213 Msa0414070:intron 20.0%
!!! TGAAATATGTTTTTTCACAT+AGG - chr3_2:59029332-59029351 None:intergenic 20.0%
!! AGTATTATATGAATCTTTGA+CGG + chr3_2:59029452-59029471 Msa0414070:intron 20.0%
!!! ATAAAACTGTTTTATCTACA+TGG - chr3_2:59029493-59029512 None:intergenic 20.0%
!!! TCTATTCATGATATTTTATG+TGG + chr3_2:59029626-59029645 Msa0414070:intron 20.0%
!!! TTCTTCAAGTTAAAATATAG+TGG + chr3_2:59030096-59030115 Msa0414070:three_prime_UTR 20.0%
!! TGAAATAAATTATCATCACA+AGG + chr3_2:59030137-59030156 Msa0414070:three_prime_UTR 20.0%
!! GAAATAAATTATCATCACAA+GGG + chr3_2:59030138-59030157 Msa0414070:three_prime_UTR 20.0%
!! TATTATGGATATGTATAAAG+TGG + chr3_2:59030167-59030186 Msa0414070:three_prime_UTR 20.0%
!!! CATATCCATAATACAATTTT+AGG - chr3_2:59030237-59030256 None:intergenic 20.0%
! AGCAATGCAATATAAGAATT+AGG - chr3_2:59025066-59025085 None:intergenic 25.0%
!! TTCTTATATTGCATTGCTTT+TGG + chr3_2:59025068-59025087 Msa0414070:CDS 25.0%
!!! TGCACTGTTTTAAAAACTTT+AGG - chr3_2:59025156-59025175 None:intergenic 25.0%
! TTTATCTTTCAATGGTAGAT+TGG + chr3_2:59025312-59025331 Msa0414070:intron 25.0%
!!! TGTTTTTGTGTTTTAGTGTT+CGG + chr3_2:59025677-59025696 Msa0414070:intron 25.0%
! TCAACAACAGAAATACAATT+CGG - chr3_2:59025724-59025743 None:intergenic 25.0%
!!! ATATTCTATGCTTGTTTTGA+TGG - chr3_2:59026132-59026151 None:intergenic 25.0%
!!! AAATGCTATTTCACAAATTC+GGG + chr3_2:59026218-59026237 Msa0414070:intron 25.0%
! ACATATGCTTTCTTGAATTA+AGG + chr3_2:59026327-59026346 Msa0414070:intron 25.0%
! AAAAAACTCGAAACCTAAAA+TGG - chr3_2:59026397-59026416 None:intergenic 25.0%
! AAAATTCAGTGTTAGTAGAT+TGG - chr3_2:59027421-59027440 None:intergenic 25.0%
!! AATTATTTAGACCTTTTGCA+TGG - chr3_2:59027637-59027656 None:intergenic 25.0%
! CTACAAAATTCAAACATGTT+TGG + chr3_2:59027741-59027760 Msa0414070:intron 25.0%
! AAATTCAAACATGTTTGGTT+TGG + chr3_2:59027746-59027765 Msa0414070:intron 25.0%
! AAAGAAGGAGAATTGATAAA+GGG - chr3_2:59027907-59027926 None:intergenic 25.0%
! TAAAGAAGGAGAATTGATAA+AGG - chr3_2:59027908-59027927 None:intergenic 25.0%
! TAAAGGAGAATTGATAAAGA+AGG - chr3_2:59027922-59027941 None:intergenic 25.0%
! ACTAAAATAGACATAGCTAA+AGG - chr3_2:59027939-59027958 None:intergenic 25.0%
! TAAACAAACTGAATGTTGTT+TGG - chr3_2:59027998-59028017 None:intergenic 25.0%
!! TGAGAGAATTGATTTATGTT+TGG - chr3_2:59028042-59028061 None:intergenic 25.0%
! CTAATTATGAATGATTACAG+TGG + chr3_2:59028252-59028271 Msa0414070:intron 25.0%
!! ATTAGTCTCATATTCTCAAA+TGG - chr3_2:59028394-59028413 None:intergenic 25.0%
! TTTAAAAGTTGAGATAAGGT+TGG - chr3_2:59028669-59028688 None:intergenic 25.0%
! CTTGATTAATTATTAGTGGT+TGG - chr3_2:59028862-59028881 None:intergenic 25.0%
! CAACCACTAATAATTAATCA+AGG + chr3_2:59028860-59028879 Msa0414070:intron 25.0%
! CATCCTTGATTAATTATTAG+TGG - chr3_2:59028866-59028885 None:intergenic 25.0%
!! CTATTATTAAGTCTAAAGTC+AGG + chr3_2:59028965-59028984 Msa0414070:intron 25.0%
! TCCATAATGATTTCTATGAT+TGG + chr3_2:59029081-59029100 Msa0414070:intron 25.0%
! CCATAATGATTTCTATGATT+GGG + chr3_2:59029082-59029101 Msa0414070:intron 25.0%
! GAAATAAAAATGGTTGTTAG+TGG - chr3_2:59029128-59029147 None:intergenic 25.0%
!! TGATATTTTATGTGGTTTTC+AGG + chr3_2:59029634-59029653 Msa0414070:intron 25.0%
! TAATTGTTGTCAAAATGAGT+TGG - chr3_2:59029817-59029836 None:intergenic 25.0%
! AAGAATCTCATTATCAAAAG+AGG + chr3_2:59029841-59029860 Msa0414070:CDS 25.0%
!! AATTTTGCAAATGCAAATCA+AGG - chr3_2:59030199-59030218 None:intergenic 25.0%
! TCTAGCTTCACTTGAAAATA+TGG + chr3_2:59025032-59025051 Msa0414070:exon 30.0%
!! TTTTGGTCTTCCTTCTTATA+GGG + chr3_2:59025085-59025104 Msa0414070:CDS 30.0%
! TGATAATTTCTTTTGTCCCT+GGG + chr3_2:59025475-59025494 Msa0414070:intron 30.0%
TCTAATAGTGTTTATACCCA+GGG - chr3_2:59025494-59025513 None:intergenic 30.0%
TTCTAATAGTGTTTATACCC+AGG - chr3_2:59025495-59025514 None:intergenic 30.0%
AACATCTATACACACACAAA+AGG + chr3_2:59025597-59025616 Msa0414070:intron 30.0%
AAATCTCCTCATCATACAAA+TGG - chr3_2:59026558-59026577 None:intergenic 30.0%
! TTTACGTGTGCATCTTTTTA+GGG - chr3_2:59026650-59026669 None:intergenic 30.0%
! TTTTACGTGTGCATCTTTTT+AGG - chr3_2:59026651-59026670 None:intergenic 30.0%
GTAAAATTACCGAAACCTAA+TGG + chr3_2:59026665-59026684 Msa0414070:intron 30.0%
AAAAAGTAACCACAAGAACA+AGG - chr3_2:59026806-59026825 None:intergenic 30.0%
! TGCTGCTTGAAAAACAAAAT+AGG + chr3_2:59027189-59027208 Msa0414070:intron 30.0%
GCTGCTTGAAAAACAAAATA+GGG + chr3_2:59027190-59027209 Msa0414070:intron 30.0%
AAAACAAAATAGGGTTGTGA+TGG + chr3_2:59027199-59027218 Msa0414070:intron 30.0%
AAACAAAATAGGGTTGTGAT+GGG + chr3_2:59027200-59027219 Msa0414070:intron 30.0%
TGATGCTATAAAATCTAAGG+TGG + chr3_2:59027309-59027328 Msa0414070:CDS 30.0%
GTCATATTTGCACAAAATTG+TGG - chr3_2:59027574-59027593 None:intergenic 30.0%
! GCAATTTAAAACCATGCAAA+AGG + chr3_2:59027623-59027642 Msa0414070:intron 30.0%
! ATTCAAATTTTGAGCCTCTT+TGG + chr3_2:59027668-59027687 Msa0414070:intron 30.0%
! ACTTCATGGATAATTGCTTT+TGG - chr3_2:59027795-59027814 None:intergenic 30.0%
GGGCAATAAAGGAAAATAAT+AGG - chr3_2:59027887-59027906 None:intergenic 30.0%
GAATTGATAAAGGGCAATAA+AGG - chr3_2:59027898-59027917 None:intergenic 30.0%
! CTTCTACAACTTTTTGGATT+TGG - chr3_2:59028334-59028353 None:intergenic 30.0%
ATCCAAAAAGTTGTAGAAGA+AGG + chr3_2:59028335-59028354 Msa0414070:intron 30.0%
GGTAATAATGATGACCTAAT+TGG - chr3_2:59028373-59028392 None:intergenic 30.0%
TCTTAGCTAAACAAACACAA+AGG + chr3_2:59028415-59028434 Msa0414070:intron 30.0%
! AAAGTGTAGCATTACTCTTT+TGG - chr3_2:59028472-59028491 None:intergenic 30.0%
! ATATGTATTTTGTAGCTTGG+AGG + chr3_2:59028545-59028564 Msa0414070:intron 30.0%
!! CTTTTTGGAAGGTAAAAGTT+GGG + chr3_2:59028570-59028589 Msa0414070:CDS 30.0%
!! GAGCTTTAAAAGTTGAGATA+AGG - chr3_2:59028673-59028692 None:intergenic 30.0%
!!! ATCTCAACTTTTAAAGCTCA+AGG + chr3_2:59028674-59028693 Msa0414070:CDS 30.0%
! TATCTTTTTGTCTCTTTAGG+AGG + chr3_2:59028792-59028811 Msa0414070:intron 30.0%
CCCAATCATAGAAATCATTA+TGG - chr3_2:59029085-59029104 None:intergenic 30.0%
CACAAAAATTTACAGACACT+TGG - chr3_2:59029279-59029298 None:intergenic 30.0%
ATTATATGAATCTTTGACGG+TGG + chr3_2:59029368-59029387 Msa0414070:intron 30.0%
CAATAATGTCCCATATTTGT+AGG - chr3_2:59029600-59029619 None:intergenic 30.0%
! ACAGTACATTTGCTAAGATA+AGG + chr3_2:59029725-59029744 Msa0414070:CDS 30.0%
!! AGTTTTAACAAGTGAATCAG+TGG - chr3_2:59029905-59029924 None:intergenic 30.0%
AACTTATAGCCAGAATGAAA+AGG + chr3_2:59029921-59029940 Msa0414070:CDS 30.0%
AGCTACAAAATCAGAATCAA+AGG - chr3_2:59029947-59029966 None:intergenic 30.0%
! TTTGATTCTGATTTTGTAGC+TGG + chr3_2:59029946-59029965 Msa0414070:CDS 30.0%
GAGATAATAAGCCTTTAACT+GGG + chr3_2:59029983-59030002 Msa0414070:CDS 30.0%
ATGGATATGTATAAAGTGGA+AGG + chr3_2:59030171-59030190 Msa0414070:three_prime_UTR 30.0%
!! CTTTTGGTCTTCCTTCTTAT+AGG + chr3_2:59025084-59025103 Msa0414070:CDS 35.0%
! CTGATAATTTCTTTTGTCCC+TGG + chr3_2:59025474-59025493 Msa0414070:intron 35.0%
TATACACAATCCGTTGTGAT+TGG + chr3_2:59025646-59025665 Msa0414070:intron 35.0%
CAAAAGCAAACCAATCACAA+CGG - chr3_2:59025659-59025678 None:intergenic 35.0%
!!! TTGTGTTTTAGTGTTCGGAT+TGG + chr3_2:59025682-59025701 Msa0414070:intron 35.0%
ACAACAGAAATACAATTCGG+AGG - chr3_2:59025721-59025740 None:intergenic 35.0%
GAGCAAAAGACTATTTCAGT+TGG - chr3_2:59026110-59026129 None:intergenic 35.0%
CATTGACCATTTGTATGATG+AGG + chr3_2:59026549-59026568 Msa0414070:intron 35.0%
ATATGACCTTTCAAGCCATT+AGG - chr3_2:59026683-59026702 None:intergenic 35.0%
GATAGATAGATACATGCACA+TGG + chr3_2:59026738-59026757 Msa0414070:intron 35.0%
GACATTACTTGAAGTCTTGA+AGG - chr3_2:59026773-59026792 None:intergenic 35.0%
!! AAATTTGAGCCTTGTTCTTG+TGG + chr3_2:59026794-59026813 Msa0414070:intron 35.0%
ACATGTTATACACATGCACA+AGG + chr3_2:59026884-59026903 Msa0414070:intron 35.0%
!!! TGCAGTTTTTTCTCCTTTGA+AGG - chr3_2:59027251-59027270 None:intergenic 35.0%
! AATTTTGAGCCTCTTTGGAT+TGG + chr3_2:59027673-59027692 Msa0414070:intron 35.0%
TTGAAAAAGCCAATCCAAAG+AGG - chr3_2:59027685-59027704 None:intergenic 35.0%
! TCACTGTAGAGAATTGCTTT+TGG - chr3_2:59027710-59027729 None:intergenic 35.0%
!! TCATGGATAATTGCTTTTGG+AGG - chr3_2:59027792-59027811 None:intergenic 35.0%
AGCTAGGATTTGTAACTTCA+TGG - chr3_2:59027809-59027828 None:intergenic 35.0%
! TTCTAGAAAAGCTAGAAGCT+AGG - chr3_2:59027825-59027844 None:intergenic 35.0%
CATGTTGCAAAAAACACATG+CGG + chr3_2:59028162-59028181 Msa0414070:intron 35.0%
AACGACTCAGATTATCTTAC+TGG + chr3_2:59028225-59028244 Msa0414070:intron 35.0%
AAGGATGCAGTTACATATTC+AGG - chr3_2:59028294-59028313 None:intergenic 35.0%
! GACCTTCTTCTACAACTTTT+TGG - chr3_2:59028340-59028359 None:intergenic 35.0%
GGTCATCAACAAATCCAATT+AGG + chr3_2:59028356-59028375 Msa0414070:intron 35.0%
! CCAACTTTTACCTTCCAAAA+AGG - chr3_2:59028572-59028591 None:intergenic 35.0%
!! CCTTTTTGGAAGGTAAAAGT+TGG + chr3_2:59028569-59028588 Msa0414070:CDS 35.0%
! AAGTTGAGATAAGGTTGGTT+AGG - chr3_2:59028664-59028683 None:intergenic 35.0%
AGGAAGACACGATTTAGTTA+TGG + chr3_2:59028812-59028831 Msa0414070:intron 35.0%
GATGAACACATCATCTCAAT+TGG - chr3_2:59029060-59029079 None:intergenic 35.0%
AAATGGTTGTTAGTGGTAGT+TGG - chr3_2:59029121-59029140 None:intergenic 35.0%
GCTACATGTATGAATCTTGT+TGG - chr3_2:59029257-59029276 None:intergenic 35.0%
TTTGTGTTAAAGCAGTTGAG+CGG + chr3_2:59029293-59029312 Msa0414070:intron 35.0%
TCTGATCAAGTACTCTTCAA+TGG + chr3_2:59029874-59029893 Msa0414070:CDS 35.0%
! AATCAAAGGCCTTTTCATTC+TGG - chr3_2:59029933-59029952 None:intergenic 35.0%
TGTAGCTGGAATGATTAAGA+TGG + chr3_2:59029960-59029979 Msa0414070:CDS 35.0%
GTAGCTGGAATGATTAAGAT+GGG + chr3_2:59029961-59029980 Msa0414070:CDS 35.0%
GGAGATAATAAGCCTTTAAC+TGG + chr3_2:59029982-59030001 Msa0414070:CDS 35.0%
TTGTAGGAGCTTGAATTAGA+AGG + chr3_2:59030029-59030048 Msa0414070:exon 35.0%
TGTAGGAGCTTGAATTAGAA+GGG + chr3_2:59030030-59030049 Msa0414070:exon 35.0%
!! TCACAAGGGTTGATGTATTA+TGG + chr3_2:59030152-59030171 Msa0414070:three_prime_UTR 35.0%
GTGAAGCTAGAGAAGAAGAT+GGG - chr3_2:59025023-59025042 None:intergenic 40.0%
AGTGAAGCTAGAGAAGAAGA+TGG - chr3_2:59025024-59025043 None:intergenic 40.0%
CTGAAGAAGTCCCTATAAGA+AGG - chr3_2:59025098-59025117 None:intergenic 40.0%
GCAGTCTGTTGTTAAAACAG+CGG + chr3_2:59025173-59025192 Msa0414070:CDS 40.0%
GTTGCCAAAGAAAATCGCAT+CGG + chr3_2:59025195-59025214 Msa0414070:CDS 40.0%
TTACATCAACAAAGCAGTCG+TGG - chr3_2:59025245-59025264 None:intergenic 40.0%
TCATGACACAGGAAAAACTG+TGG + chr3_2:59025374-59025393 Msa0414070:intron 40.0%
TGGTGTAAGTGTGTAGTGAA+TGG + chr3_2:59025394-59025413 Msa0414070:intron 40.0%
! AATTAAGGTGTCCTCTTGAG+TGG + chr3_2:59026342-59026361 Msa0414070:intron 40.0%
AACCTAAAATGGTTACCGTC+TGG - chr3_2:59026386-59026405 None:intergenic 40.0%
GTAGCATACATGTGCTATGT+AGG - chr3_2:59026525-59026544 None:intergenic 40.0%
!! TGTGCATCTTTTTAGGGACA+AGG - chr3_2:59026644-59026663 None:intergenic 40.0%
CCTTTCAAGCCATTAGGTTT+CGG - chr3_2:59026677-59026696 None:intergenic 40.0%
AGATACATGCACATGGATGA+TGG + chr3_2:59026745-59026764 Msa0414070:intron 40.0%
CTTTAATAGCCCATCTGAGT+TGG + chr3_2:59026958-59026977 Msa0414070:intron 40.0%
ACCTCGTAAGCTAATAGTAC+CGG - chr3_2:59026984-59027003 None:intergenic 40.0%
TCTTCAAGCTATTAGGTCGA+GGG + chr3_2:59027017-59027036 Msa0414070:intron 40.0%
! CCTCTCACAGAATTGTTGTT+AGG - chr3_2:59027277-59027296 None:intergenic 40.0%
CCTAACAACAATTCTGTGAG+AGG + chr3_2:59027274-59027293 Msa0414070:CDS 40.0%
AAGTTGGGAGAAGAGATTCA+AGG + chr3_2:59028585-59028604 Msa0414070:CDS 40.0%
AATTTCACTGCTGCAAACAC+TGG + chr3_2:59028614-59028633 Msa0414070:CDS 40.0%
ATTTCACTGCTGCAAACACT+GGG + chr3_2:59028615-59028634 Msa0414070:CDS 40.0%
! AGGTTGGTTAGGTTAGATGT+AGG - chr3_2:59028653-59028672 None:intergenic 40.0%
AGATAAAGCAACCATGTCCT+TGG - chr3_2:59028708-59028727 None:intergenic 40.0%
! AAGGACATGGTTGCTTTATC+TGG + chr3_2:59028707-59028726 Msa0414070:CDS 40.0%
!! AAAGCAGTTGAGCGGATTTT+TGG + chr3_2:59029301-59029320 Msa0414070:intron 40.0%
!! TTTTCAGGAGCTCACACAAT+AGG + chr3_2:59029649-59029668 Msa0414070:intron 40.0%
TTTCAGGAGCTCACACAATA+GGG + chr3_2:59029650-59029669 Msa0414070:intron 40.0%
TGTTGCTGTCGTTGTATATG+TGG - chr3_2:59029702-59029721 None:intergenic 40.0%
GATCAAGTACTCTTCAATGG+TGG + chr3_2:59029877-59029896 Msa0414070:CDS 40.0%
AAGCCTTTAACTGGGAAACA+AGG + chr3_2:59029991-59030010 Msa0414070:CDS 40.0%
AGCCTTTAACTGGGAAACAA+GGG + chr3_2:59029992-59030011 Msa0414070:CDS 40.0%
GGGAGATTAGGAAGAATTGT+AGG + chr3_2:59030013-59030032 Msa0414070:CDS 40.0%
! TGCTCCGATGCGATTTTCTT+TGG - chr3_2:59025202-59025221 None:intergenic 45.0%
AGTGTGTAGTGAATGGCTGT+TGG + chr3_2:59025401-59025420 Msa0414070:intron 45.0%
! TTTGACGTGTGCAGTTGGTA+TGG - chr3_2:59026621-59026640 None:intergenic 45.0%
CCGAAACCTAATGGCTTGAA+AGG + chr3_2:59026674-59026693 Msa0414070:intron 45.0%
GTGCTCCTCTTCAAGCTATT+AGG + chr3_2:59027010-59027029 Msa0414070:intron 45.0%
CTCGACCTAATAGCTTGAAG+AGG - chr3_2:59027018-59027037 None:intergenic 45.0%
CTCTTCAAGCTATTAGGTCG+AGG + chr3_2:59027016-59027035 Msa0414070:intron 45.0%
GATGACACTTCGTCCTTCAA+AGG + chr3_2:59027235-59027254 Msa0414070:CDS 45.0%
! GGTCTCATGTGCTGATATAG+TGG + chr3_2:59027351-59027370 Msa0414070:CDS 45.0%
AACAGAGTCACGAGCTGTAA+TGG - chr3_2:59027377-59027396 None:intergenic 45.0%
! ACAGTGGATTTGAGACCTGA+CGG + chr3_2:59028268-59028287 Msa0414070:intron 45.0%
AGTTACATATTCAGGCCGTC+AGG - chr3_2:59028286-59028305 None:intergenic 45.0%
TGCATCCTTAAGTCGTTGCA+GGG + chr3_2:59028305-59028324 Msa0414070:intron 45.0%
! TGTAGCTTGGAGGTCCTTTT+TGG + chr3_2:59028555-59028574 Msa0414070:intron 45.0%
TTTCACTGCTGCAAACACTG+GGG + chr3_2:59028616-59028635 Msa0414070:CDS 45.0%
GTTAGGTTAGATGTAGGAGC+TGG - chr3_2:59028647-59028666 None:intergenic 45.0%
GCAAGGTGTACAAGTTTCAG+AGG + chr3_2:59029676-59029695 Msa0414070:CDS 45.0%
AAGAACTGCCCTAGAACAAG+TGG + chr3_2:59029751-59029770 Msa0414070:CDS 45.0%
GCCTTTAACTGGGAAACAAG+GGG + chr3_2:59029993-59030012 Msa0414070:CDS 45.0%
! TCCCCTTGTTTCCCAGTTAA+AGG - chr3_2:59029997-59030016 None:intergenic 45.0%
!! ATAACAAAATAAATATATTA+TGG - chr3_2:59028510-59028529 None:intergenic 5.0%
AGTCGTGGAAGAAGAGACGA+AGG - chr3_2:59025230-59025249 None:intergenic 50.0%
!! AGTGGCGTGGTGTGTTACTT+TGG + chr3_2:59026360-59026379 Msa0414070:intron 50.0%
!! GGTGTGTTACTTTGGCCAGA+CGG + chr3_2:59026368-59026387 Msa0414070:intron 50.0%
! GGCCAGACGGTAACCATTTT+AGG + chr3_2:59026381-59026400 Msa0414070:intron 50.0%
CAAGGTTTGACGTGTGCAGT+TGG - chr3_2:59026626-59026645 None:intergenic 50.0%
! AATAGCCCATCTGAGTTGGC+CGG + chr3_2:59026962-59026981 Msa0414070:intron 50.0%
!! TAGTACCGGCCAACTCAGAT+GGG - chr3_2:59026970-59026989 None:intergenic 50.0%
!! ATAGTACCGGCCAACTCAGA+TGG - chr3_2:59026971-59026990 None:intergenic 50.0%
! GCCGGTACTATTAGCTTACG+AGG + chr3_2:59026980-59026999 Msa0414070:intron 50.0%
AAGGTGGAAGCAATATGCCC+TGG + chr3_2:59027325-59027344 Msa0414070:CDS 50.0%
CTGCATCCTTAAGTCGTTGC+AGG + chr3_2:59028304-59028323 Msa0414070:intron 50.0%
GGATTCCCTGCAACGACTTA+AGG - chr3_2:59028313-59028332 None:intergenic 50.0%
! GCTTGGAGGTCCTTTTTGGA+AGG + chr3_2:59028559-59028578 Msa0414070:intron 50.0%
AGCTCAAGGACTTTCTGCCA+AGG + chr3_2:59028688-59028707 Msa0414070:CDS 50.0%
AGGACTTTCTGCCAAGGACA+TGG + chr3_2:59028694-59028713 Msa0414070:CDS 50.0%
CTCACACAATAGGGAGAGCA+AGG + chr3_2:59029659-59029678 Msa0414070:CDS 50.0%
CTCCTGAGCCACTTGTTCTA+GGG - chr3_2:59029762-59029781 None:intergenic 50.0%
TCTCCTGAGCCACTTGTTCT+AGG - chr3_2:59029763-59029782 None:intergenic 50.0%
CTGGGAAACAAGGGGAGATT+AGG + chr3_2:59030001-59030020 Msa0414070:CDS 50.0%
AACACACCACGCCACTCAAG+AGG - chr3_2:59026356-59026375 None:intergenic 55.0%
GGAAGCAATATGCCCTGGTG+TGG + chr3_2:59027330-59027349 Msa0414070:CDS 55.0%
CAGCACATGAGACCACACCA+GGG - chr3_2:59027345-59027364 None:intergenic 55.0%
TCAGCACATGAGACCACACC+AGG - chr3_2:59027346-59027365 None:intergenic 55.0%
TGCCCTAGAACAAGTGGCTC+AGG + chr3_2:59029757-59029776 Msa0414070:CDS 55.0%
AGGTGTCCTCTTGAGTGGCG+TGG + chr3_2:59026347-59026366 Msa0414070:intron 60.0%
Chromosome Type Strat End Strand Name
chr3_2 gene 59024966 59030264 59024966 ID=Msa0414070;Name=Msa0414070
chr3_2 mRNA 59024966 59030264 59024966 ID=Msa0414070-mRNA-1;Parent=Msa0414070;Name=Msa0414070-mRNA-1;_AED=0.10;_eAED=0.10;_QI=85|1|1|1|1|1|4|217|320
chr3_2 exon 59024966 59025260 59024966 ID=Msa0414070-mRNA-1:exon:12275;Parent=Msa0414070-mRNA-1
chr3_2 exon 59027211 59027402 59027211 ID=Msa0414070-mRNA-1:exon:12276;Parent=Msa0414070-mRNA-1
chr3_2 exon 59028560 59028728 59028560 ID=Msa0414070-mRNA-1:exon:12277;Parent=Msa0414070-mRNA-1
chr3_2 exon 59029656 59030264 59029656 ID=Msa0414070-mRNA-1:exon:12278;Parent=Msa0414070-mRNA-1
chr3_2 five_prime_UTR 59024966 59025050 59024966 ID=Msa0414070-mRNA-1:five_prime_utr;Parent=Msa0414070-mRNA-1
chr3_2 CDS 59025051 59025260 59025051 ID=Msa0414070-mRNA-1:cds;Parent=Msa0414070-mRNA-1
chr3_2 CDS 59027211 59027402 59027211 ID=Msa0414070-mRNA-1:cds;Parent=Msa0414070-mRNA-1
chr3_2 CDS 59028560 59028728 59028560 ID=Msa0414070-mRNA-1:cds;Parent=Msa0414070-mRNA-1
chr3_2 CDS 59029656 59030047 59029656 ID=Msa0414070-mRNA-1:cds;Parent=Msa0414070-mRNA-1
chr3_2 three_prime_UTR 59030048 59030264 59030048 ID=Msa0414070-mRNA-1:three_prime_utr;Parent=Msa0414070-mRNA-1
Gene Sequence

>Msa0414070

ATGGCACATTCTCCTAATTCTTATATTGCATTGCTTTTGGTCTTCCTTCTTATAGGGACTTCTTCAGCTCAACTTTCTGAGAACTTTTATTCTAAGAAATGTCCTAAAGTTTTTAAAACAGTGCAGTCTGTTGTTAAAACAGCGGTTGCCAAAGAAAATCGCATCGGAGCATCTCTCCTTCGTCTCTTCTTCCACGACTGCTTTGTTGATGGTTGTGATGGGTCAATACTACTTGATGACACTTCGTCCTTCAAAGGAGAAAAAACTGCAGCTCCTAACAACAATTCTGTGAGAGGTTATGAAGTAATTGATGCTATAAAATCTAAGGTGGAAGCAATATGCCCTGGTGTGGTCTCATGTGCTGATATAGTGGCCATTACAGCTCGTGACTCTGTTGTGATTCTTGGAGGTCCTTTTTGGAAGGTAAAAGTTGGGAGAAGAGATTCAAGGACAGCTAATTTCACTGCTGCAAACACTGGGGTGATTCCAGCTCCTACATCTAACCTAACCAACCTTATCTCAACTTTTAAAGCTCAAGGACTTTCTGCCAAGGACATGGTTGCTTTATCTGGAGCTCACACAATAGGGAGAGCAAGGTGTACAAGTTTCAGAGGCCACATATACAACGACAGCAACATTGACAGTACATTTGCTAAGATAAGGCAAAAGAACTGCCCTAGAACAAGTGGCTCAGGAGACAACAATCTAGCAAATCTAGACTTGAGAACTCCAACTCATTTTGACAACAATTACTACAAGAATCTCATTATCAAAAGAGGACTACTTCATTCTGATCAAGTACTCTTCAATGGTGGAACCACTGATTCACTTGTTAAAACTTATAGCCAGAATGAAAAGGCCTTTGATTCTGATTTTGTAGCTGGAATGATTAAGATGGGAGATAATAAGCCTTTAACTGGGAAACAAGGGGAGATTAGGAAGAATTGTAGGAGCTTGAATTAG
Protein sequence

>Msa0414070

MAHSPNSYIALLLVFLLIGTSSAQLSENFYSKKCPKVFKTVQSVVKTAVAKENRIGASLLRLFFHDCFVDGCDGSILLDDTSSFKGEKTAAPNNNSVRGYEVIDAIKSKVEAICPGVVSCADIVAITARDSVVILGGPFWKVKVGRRDSRTANFTAANTGVIPAPTSNLTNLISTFKAQGLSAKDMVALSGAHTIGRARCTSFRGHIYNDSNIDSTFAKIRQKNCPRTSGSGDNNLANLDLRTPTHFDNNYYKNLIIKRGLLHSDQVLFNGGTTDSLVKTYSQNEKAFDSDFVAGMIKMGDNKPLTGKQGEIRKNCRSLN*