Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0481990 | XP_024638638.1 | 99.135 | 347 | 3 | 0 | 23 | 369 | 135 | 481 | 0.0 | 734 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0481990 | A0A396ID29 | 99.135 | 347 | 3 | 0 | 23 | 369 | 135 | 481 | 0.0 | 734 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0027820 | Msa0481990 | 0.801177 | 1.018129e-48 | -8.615850e-47 |
| Msa0032920 | Msa0481990 | -0.801602 | 8.333025e-49 | -8.615850e-47 |
| Msa0174450 | Msa0481990 | 0.809519 | 1.817989e-50 | -8.615850e-47 |
| Msa0378720 | Msa0481990 | 0.801051 | 1.080564e-48 | -8.615850e-47 |
| Msa0474730 | Msa0481990 | 0.807809 | 4.216099e-50 | -8.615850e-47 |
| Msa0481990 | Msa0611210 | 0.836467 | 9.201557e-57 | -8.615850e-47 |
| Msa0481990 | Msa0626450 | 0.811878 | 5.615711e-51 | -8.615850e-47 |
| Msa0481990 | Msa0626490 | 0.813789 | 2.142326e-51 | -8.615850e-47 |
| Msa0481990 | Msa0651550 | 0.847423 | 1.167773e-59 | -8.615850e-47 |
| Msa0481990 | Msa0664600 | 0.812678 | 3.756653e-51 | -8.615850e-47 |
| Msa0481990 | Msa0701700 | 0.819965 | 8.802798e-53 | -8.615850e-47 |
| Msa0481990 | Msa0736960 | 0.822004 | 2.986187e-53 | -8.615850e-47 |
| Msa0481990 | Msa0832120 | 0.805952 | 1.040967e-49 | -8.615850e-47 |
| Msa0481990 | Msa0935820 | 0.803043 | 4.207862e-49 | -8.615850e-47 |
| Msa0481990 | Msa1072940 | 0.804876 | 1.750363e-49 | -8.615850e-47 |
| Msa0481990 | Msa1160920 | 0.801431 | 9.034088e-49 | -8.615850e-47 |
| Msa0481990 | Msa1209420 | 0.968767 | 3.790821e-129 | -8.615850e-47 |
| Msa0481990 | Msa1297230 | 0.807869 | 4.094303e-50 | -8.615850e-47 |
| Msa0481990 | Msa1314650 | 0.800654 | 1.302553e-48 | -8.615850e-47 |
| Msa0481990 | Msa1348090 | 0.804823 | 1.795500e-49 | -8.615850e-47 |
| Msa0481990 | Msa1440960 | 0.807487 | 4.934956e-50 | -8.615850e-47 |
| Msa0307270 | Msa0481990 | 0.803228 | 3.853038e-49 | -8.615850e-47 |
| Msa0337700 | Msa0481990 | 0.806480 | 8.060858e-50 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0481990 | MtrunA17_Chr4g0058771 | 99.135 | 347 | 3 | 0 | 23 | 369 | 135 | 481 | 0.0 | 734 |
| Msa0481990 | MtrunA17_Chr3g0117271 | 83.573 | 347 | 56 | 1 | 23 | 369 | 151 | 496 | 0.0 | 631 |
| Msa0481990 | MtrunA17_Chr5g0413131 | 77.874 | 348 | 74 | 3 | 23 | 369 | 118 | 463 | 0.0 | 567 |
| Msa0481990 | MtrunA17_Chr8g0368161 | 72.334 | 347 | 95 | 1 | 23 | 369 | 103 | 448 | 0.0 | 545 |
| Msa0481990 | MtrunA17_Chr2g0314461 | 60.231 | 347 | 132 | 4 | 23 | 369 | 66 | 406 | 3.13e-155 | 442 |
| Msa0481990 | MtrunA17_Chr7g0274951 | 57.724 | 369 | 133 | 6 | 23 | 368 | 71 | 439 | 2.76e-153 | 439 |
| Msa0481990 | MtrunA17_Chr1g0189961 | 56.728 | 379 | 132 | 7 | 23 | 369 | 73 | 451 | 2.47e-152 | 437 |
| Msa0481990 | MtrunA17_Chr8g0368241 | 57.143 | 343 | 146 | 1 | 27 | 369 | 73 | 414 | 1.37e-151 | 433 |
| Msa0481990 | MtrunA17_Chr2g0314471 | 58.501 | 347 | 138 | 5 | 23 | 369 | 66 | 406 | 2.95e-148 | 425 |
| Msa0481990 | MtrunA17_Chr2g0314451 | 58.213 | 347 | 139 | 4 | 23 | 369 | 65 | 405 | 5.67e-148 | 424 |
| Msa0481990 | MtrunA17_Chr8g0380511 | 56.198 | 363 | 141 | 6 | 23 | 368 | 54 | 415 | 6.55e-147 | 422 |
| Msa0481990 | MtrunA17_Chr2g0309251 | 56.011 | 366 | 141 | 5 | 23 | 369 | 62 | 426 | 2.94e-142 | 410 |
| Msa0481990 | MtrunA17_Chr8g0368291 | 48.128 | 374 | 177 | 7 | 2 | 369 | 43 | 405 | 2.09e-124 | 364 |
| Msa0481990 | MtrunA17_Chr8g0368341 | 51.003 | 349 | 152 | 7 | 23 | 369 | 4 | 335 | 1.11e-119 | 349 |
| Msa0481990 | MtrunA17_Chr8g0368201 | 52.500 | 320 | 134 | 4 | 66 | 369 | 3 | 320 | 2.61e-116 | 340 |
| Msa0481990 | MtrunA17_Chr3g0129891 | 46.839 | 348 | 116 | 7 | 23 | 368 | 99 | 379 | 1.18e-103 | 310 |
| Msa0481990 | MtrunA17_Chr2g0326371 | 51.863 | 322 | 138 | 10 | 52 | 369 | 52 | 360 | 1.13e-101 | 304 |
| Msa0481990 | MtrunA17_Chr8g0368221 | 62.727 | 220 | 76 | 3 | 25 | 244 | 45 | 258 | 2.02e-94 | 282 |
| Msa0481990 | MtrunA17_Chr8g0368181 | 65.285 | 193 | 66 | 1 | 177 | 369 | 2 | 193 | 4.99e-88 | 263 |
| Msa0481990 | MtrunA17_Chr6g0453411 | 39.084 | 371 | 198 | 9 | 23 | 369 | 9 | 375 | 1.74e-86 | 266 |
| Msa0481990 | MtrunA17_Chr3g0135371 | 37.297 | 370 | 206 | 7 | 23 | 369 | 69 | 435 | 8.53e-81 | 253 |
| Msa0481990 | MtrunA17_Chr3g0135381 | 38.919 | 370 | 192 | 8 | 23 | 364 | 69 | 432 | 1.99e-79 | 251 |
| Msa0481990 | MtrunA17_Chr8g0368331 | 41.155 | 277 | 131 | 4 | 122 | 369 | 13 | 286 | 3.81e-74 | 231 |
| Msa0481990 | MtrunA17_Chr3g0135401 | 38.769 | 325 | 166 | 8 | 67 | 365 | 29 | 346 | 2.42e-70 | 224 |
| Msa0481990 | MtrunA17_Chr8g0368361 | 51.795 | 195 | 91 | 2 | 177 | 369 | 2 | 195 | 2.53e-69 | 216 |
| Msa0481990 | MtrunA17_Chr8g0368281 | 50.777 | 193 | 94 | 1 | 177 | 368 | 2 | 194 | 1.31e-68 | 214 |
| Msa0481990 | MtrunA17_Chr1g0151871 | 38.667 | 300 | 170 | 6 | 72 | 369 | 40 | 327 | 3.89e-68 | 217 |
| Msa0481990 | MtrunA17_Chr8g0368351 | 58.599 | 157 | 57 | 3 | 23 | 178 | 99 | 248 | 4.82e-59 | 192 |
| Msa0481990 | MtrunA17_Chr8g0368231 | 58.400 | 125 | 52 | 0 | 245 | 369 | 8 | 132 | 1.43e-48 | 160 |
| Msa0481990 | MtrunA17_Chr3g0138811 | 29.380 | 371 | 237 | 12 | 1 | 365 | 35 | 386 | 1.07e-44 | 158 |
| Msa0481990 | MtrunA17_Chr8g0368261 | 55.385 | 130 | 56 | 2 | 241 | 369 | 1 | 129 | 3.73e-44 | 149 |
| Msa0481990 | MtrunA17_Chr3g0135441 | 34.008 | 247 | 132 | 7 | 130 | 369 | 10 | 232 | 1.24e-41 | 145 |
| Msa0481990 | MtrunA17_Chr2g0302691 | 32.955 | 352 | 196 | 14 | 26 | 363 | 43 | 368 | 1.11e-40 | 147 |
| Msa0481990 | MtrunA17_Chr8g0368381 | 53.097 | 113 | 53 | 0 | 177 | 289 | 2 | 114 | 3.00e-40 | 139 |
| Msa0481990 | MtrunA17_Chr8g0368321 | 66.316 | 95 | 29 | 2 | 22 | 116 | 57 | 148 | 5.77e-38 | 134 |
| Msa0481990 | MtrunA17_Chr8g0339871 | 37.705 | 244 | 132 | 11 | 132 | 363 | 2 | 237 | 6.49e-38 | 136 |
| Msa0481990 | MtrunA17_Chr3g0135431 | 38.916 | 203 | 94 | 5 | 23 | 199 | 62 | 260 | 4.74e-37 | 138 |
| Msa0481990 | MtrunA17_Chr8g0368171 | 44.304 | 158 | 65 | 3 | 23 | 178 | 68 | 204 | 7.43e-37 | 132 |
| Msa0481990 | MtrunA17_Chr8g0391201 | 32.636 | 239 | 147 | 9 | 133 | 363 | 3 | 235 | 7.62e-33 | 122 |
| Msa0481990 | MtrunA17_Chr8g0368271 | 65.116 | 86 | 29 | 1 | 23 | 108 | 69 | 153 | 1.04e-31 | 118 |
| Msa0481990 | MtrunA17_Chr5g0445181 | 35.398 | 226 | 124 | 9 | 81 | 304 | 92 | 297 | 8.46e-29 | 113 |
| Msa0481990 | MtrunA17_Chr2g0302651 | 33.182 | 220 | 112 | 10 | 155 | 363 | 1 | 196 | 4.90e-23 | 95.5 |
| Msa0481990 | MtrunA17_Chr8g0353971 | 34.884 | 172 | 102 | 6 | 197 | 363 | 4 | 170 | 9.81e-21 | 88.6 |
| Msa0481990 | MtrunA17_Chr8g0353941 | 32.984 | 191 | 114 | 7 | 182 | 366 | 1 | 183 | 8.89e-20 | 85.9 |
| Msa0481990 | MtrunA17_Chr5g0426971 | 25.954 | 262 | 160 | 8 | 109 | 363 | 22 | 256 | 1.05e-19 | 87.8 |
| Msa0481990 | MtrunA17_Chr5g0434771 | 40.000 | 125 | 70 | 3 | 194 | 318 | 15 | 134 | 2.95e-19 | 84.7 |
| Msa0481990 | MtrunA17_Chr8g0353931 | 31.646 | 158 | 96 | 5 | 26 | 178 | 53 | 203 | 1.34e-16 | 77.8 |
| Msa0481990 | MtrunA17_Chr3g0135451 | 44.340 | 106 | 39 | 4 | 23 | 109 | 56 | 160 | 7.19e-16 | 75.5 |
| Msa0481990 | MtrunA17_Chr5g0443801 | 30.631 | 111 | 75 | 2 | 132 | 242 | 21 | 129 | 4.92e-14 | 69.7 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0481990 | AT5G50150.1 | 78.202 | 367 | 73 | 4 | 5 | 369 | 59 | 420 | 0.0 | 598 |
| Msa0481990 | AT1G70550.1 | 76.945 | 347 | 79 | 1 | 23 | 369 | 120 | 465 | 0.0 | 575 |
| Msa0481990 | AT1G23340.2 | 75.504 | 347 | 84 | 1 | 23 | 369 | 64 | 409 | 0.0 | 571 |
| Msa0481990 | AT1G23340.1 | 75.504 | 347 | 84 | 1 | 23 | 369 | 64 | 409 | 0.0 | 571 |
| Msa0481990 | AT1G10750.1 | 73.487 | 347 | 91 | 1 | 23 | 369 | 122 | 467 | 0.0 | 555 |
| Msa0481990 | AT5G18460.1 | 58.953 | 363 | 132 | 6 | 23 | 368 | 67 | 429 | 5.34e-152 | 435 |
| Msa0481990 | AT3G13510.1 | 57.300 | 363 | 138 | 6 | 23 | 369 | 58 | 419 | 5.15e-151 | 432 |
| Msa0481990 | AT1G55360.1 | 56.319 | 364 | 141 | 6 | 23 | 369 | 60 | 422 | 4.39e-149 | 427 |
| Msa0481990 | AT5G56530.2 | 55.525 | 362 | 144 | 5 | 23 | 368 | 59 | 419 | 3.92e-145 | 417 |
| Msa0481990 | AT5G56530.1 | 55.525 | 362 | 144 | 5 | 23 | 368 | 59 | 419 | 3.92e-145 | 417 |
| Msa0481990 | AT2G44210.2 | 50.505 | 396 | 168 | 7 | 1 | 369 | 51 | 445 | 4.24e-136 | 395 |
| Msa0481990 | AT2G44210.1 | 53.279 | 366 | 151 | 6 | 23 | 369 | 51 | 415 | 4.47e-136 | 394 |
| Msa0481990 | AT1G23340.3 | 76.577 | 222 | 51 | 1 | 23 | 244 | 64 | 284 | 4.89e-127 | 367 |
| Msa0481990 | AT2G44220.1 | 50.980 | 357 | 160 | 7 | 23 | 369 | 52 | 403 | 5.26e-124 | 363 |
| Msa0481990 | AT2G44240.1 | 47.042 | 355 | 176 | 7 | 23 | 369 | 52 | 402 | 7.59e-110 | 327 |
| Msa0481990 | AT2G17750.1 | 44.350 | 354 | 184 | 9 | 23 | 368 | 47 | 395 | 1.21e-105 | 316 |
| Msa0481990 | AT2G19360.1 | 44.947 | 376 | 175 | 9 | 23 | 368 | 52 | 425 | 2.84e-105 | 316 |
| Msa0481990 | AT3G48230.1 | 46.667 | 360 | 169 | 9 | 23 | 369 | 24 | 373 | 2.04e-104 | 312 |
| Msa0481990 | AT2G44250.1 | 45.938 | 357 | 179 | 9 | 23 | 368 | 55 | 408 | 6.05e-97 | 294 |
| Msa0481990 | AT5G19170.1 | 44.348 | 345 | 181 | 6 | 23 | 363 | 28 | 365 | 1.38e-96 | 293 |
| Msa0481990 | AT1G70550.2 | 76.879 | 173 | 39 | 1 | 23 | 195 | 120 | 291 | 7.09e-96 | 287 |
| Msa0481990 | AT2G44250.2 | 44.785 | 326 | 166 | 9 | 54 | 368 | 3 | 325 | 5.57e-83 | 256 |
| Msa0481990 | AT1G10750.2 | 59.067 | 193 | 77 | 2 | 23 | 214 | 122 | 313 | 7.67e-77 | 241 |
| Msa0481990 | AT5G25950.1 | 35.989 | 364 | 200 | 8 | 35 | 369 | 73 | 432 | 6.88e-73 | 233 |
| Msa0481990 | AT5G25960.1 | 35.088 | 342 | 177 | 7 | 35 | 369 | 54 | 357 | 4.66e-65 | 211 |
| Msa0481990 | AT2G20170.1 | 35.735 | 347 | 208 | 10 | 26 | 363 | 56 | 396 | 4.62e-63 | 207 |
| Msa0481990 | AT2G20170.2 | 35.735 | 347 | 208 | 10 | 26 | 363 | 56 | 396 | 4.62e-63 | 207 |
| Msa0481990 | AT4G23370.1 | 35.411 | 353 | 206 | 12 | 26 | 363 | 56 | 401 | 5.72e-59 | 196 |
| Msa0481990 | AT4G23380.1 | 33.807 | 352 | 204 | 13 | 27 | 363 | 61 | 398 | 1.34e-55 | 187 |
| Msa0481990 | AT4G23390.1 | 35.328 | 351 | 204 | 15 | 26 | 363 | 57 | 397 | 3.54e-54 | 184 |
| Msa0481990 | AT2G20170.3 | 32.853 | 347 | 201 | 10 | 26 | 363 | 56 | 379 | 2.24e-53 | 181 |
| Msa0481990 | AT4G23355.1 | 33.143 | 350 | 212 | 13 | 26 | 363 | 59 | 398 | 9.29e-53 | 180 |
| Msa0481990 | AT4G23365.1 | 33.143 | 350 | 212 | 14 | 26 | 363 | 59 | 398 | 1.33e-52 | 179 |
| Msa0481990 | AT4G23360.1 | 33.333 | 351 | 211 | 14 | 26 | 363 | 59 | 399 | 1.53e-52 | 179 |
| Msa0481990 | AT4G23350.1 | 32.386 | 352 | 214 | 14 | 26 | 363 | 59 | 400 | 3.73e-51 | 176 |
| Msa0481990 | AT2G35250.1 | 32.267 | 375 | 205 | 13 | 6 | 366 | 1 | 340 | 5.89e-47 | 163 |
| Msa0481990 | AT4G17505.1 | 30.484 | 351 | 184 | 12 | 25 | 369 | 25 | 321 | 2.91e-41 | 147 |
| Msa0481990 | AT4G15050.1 | 31.854 | 383 | 220 | 19 | 1 | 363 | 33 | 394 | 2.82e-40 | 147 |
| Msa0481990 | AT5G46810.1 | 28.142 | 366 | 224 | 14 | 20 | 363 | 1 | 349 | 1.46e-36 | 136 |
| Msa0481990 | AT1G10190.1 | 30.052 | 386 | 223 | 17 | 1 | 363 | 33 | 394 | 1.91e-36 | 136 |
| Msa0481990 | AT2G27320.1 | 33.446 | 296 | 165 | 11 | 29 | 320 | 30 | 297 | 3.81e-36 | 134 |
| Msa0481990 | AT5G46820.1 | 28.490 | 351 | 214 | 14 | 30 | 363 | 17 | 347 | 1.33e-34 | 130 |
| Msa0481990 | AT5G60380.1 | 29.240 | 342 | 216 | 13 | 30 | 363 | 44 | 367 | 1.51e-33 | 128 |
| Msa0481990 | AT5G46200.1 | 26.277 | 411 | 243 | 14 | 5 | 363 | 3 | 405 | 1.69e-33 | 129 |
| Msa0481990 | AT5G25410.1 | 27.778 | 342 | 217 | 12 | 30 | 363 | 44 | 363 | 7.81e-32 | 123 |
| Msa0481990 | AT4G15053.1 | 31.421 | 366 | 199 | 20 | 25 | 363 | 61 | 401 | 2.56e-31 | 122 |
| Msa0481990 | AT2G24950.1 | 28.117 | 377 | 223 | 18 | 8 | 363 | 60 | 409 | 8.69e-31 | 121 |
| Msa0481990 | AT5G05030.1 | 28.324 | 346 | 218 | 13 | 28 | 365 | 36 | 359 | 4.56e-30 | 119 |
| Msa0481990 | AT4G17860.1 | 29.513 | 349 | 205 | 17 | 30 | 363 | 29 | 351 | 8.84e-29 | 115 |
| Msa0481990 | AT4G10220.1 | 28.412 | 359 | 210 | 16 | 25 | 363 | 67 | 398 | 1.17e-27 | 112 |
| Msa0481990 | AT4G23373.1 | 35.897 | 195 | 102 | 8 | 25 | 218 | 55 | 227 | 1.38e-27 | 110 |
| Msa0481990 | AT2G38255.1 | 31.553 | 206 | 118 | 6 | 30 | 234 | 14 | 197 | 9.42e-27 | 106 |
| Msa0481990 | AT5G11660.1 | 28.669 | 293 | 189 | 9 | 80 | 365 | 25 | 304 | 4.15e-26 | 106 |
| Msa0481990 | AT4G23080.1 | 27.487 | 382 | 226 | 21 | 8 | 365 | 52 | 406 | 8.42e-24 | 102 |
| Msa0481990 | AT4G10210.1 | 27.350 | 351 | 201 | 16 | 25 | 350 | 67 | 388 | 1.23e-23 | 101 |
| Msa0481990 | AT2G03930.2 | 37.762 | 143 | 74 | 4 | 81 | 221 | 13 | 142 | 1.78e-21 | 90.5 |
| Msa0481990 | AT5G36680.1 | 27.301 | 326 | 201 | 16 | 56 | 368 | 29 | 331 | 2.27e-21 | 94.0 |
| Msa0481990 | AT5G36770.1 | 27.301 | 326 | 201 | 16 | 56 | 368 | 29 | 331 | 2.27e-21 | 94.0 |
| Msa0481990 | AT5G25415.1 | 29.098 | 244 | 152 | 8 | 133 | 365 | 99 | 332 | 1.01e-20 | 92.4 |
| Msa0481990 | AT5G04937.1 | 28.638 | 213 | 125 | 8 | 158 | 363 | 6 | 198 | 7.57e-17 | 79.0 |
| Msa0481990 | AT5G37520.1 | 32.584 | 178 | 101 | 9 | 194 | 364 | 33 | 198 | 8.56e-16 | 75.5 |
Find 98 sgRNAs with CRISPR-Local
Find 564 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ATCCTAGATTCTTCACTTAT+TGG | 0.141391 | 3_3:-88424526 | Msa0481990:CDS |
| AATTCAGCTTGTCACAAATA+TGG | 0.171314 | 3_3:-88424741 | Msa0481990:CDS |
| TTAGAGACACTTTGTTATTA+AGG | 0.216561 | 3_3:-88422143 | Msa0481990:three_prime_UTR |
| TTGATATTGGCTTAATGATT+TGG | 0.228296 | 3_3:-88424284 | Msa0481990:CDS |
| CCATTGTTGTTATACCCTTT+TGG | 0.234746 | 3_3:+88425297 | None:intergenic |
| AGCCACCAATGTCCATGTTT+TGG | 0.238090 | 3_3:+88422689 | None:intergenic |
| GGACATTGGTGGCTTGAATT+TGG | 0.240872 | 3_3:-88422680 | Msa0481990:CDS |
| TTTCAGCTTTGGATTGATTC+TGG | 0.261074 | 3_3:-88425255 | Msa0481990:CDS |
| GCAAGCTCTATAAGAAGATT+TGG | 0.281194 | 3_3:-88425171 | Msa0481990:CDS |
| TGTTCTGTTGTTCTTCTGAT+TGG | 0.281618 | 3_3:+88425207 | None:intergenic |
| AATGGAAGACAATTTGATAT+TGG | 0.281915 | 3_3:-88424297 | Msa0481990:CDS |
| CTTCCATTATAGAACGATCT+TGG | 0.303864 | 3_3:+88424312 | None:intergenic |
| ATTACTAGCTTCATATGGTT+TGG | 0.314523 | 3_3:-88422211 | Msa0481990:three_prime_UTR |
| TAATTGTCACCATATAATTC+AGG | 0.318523 | 3_3:+88424548 | None:intergenic |
| GAAACTTACAAGTAGTTGAT+TGG | 0.334217 | 3_3:-88422478 | Msa0481990:CDS |
| ATGTTACAATTTACTATGTT+CGG | 0.337542 | 3_3:-88424382 | Msa0481990:CDS |
| AAGAGGGAAGAAATAATGTT+TGG | 0.337838 | 3_3:-88422388 | Msa0481990:CDS |
| CAACAAATAACTTTCAGCTT+TGG | 0.338340 | 3_3:-88425266 | Msa0481990:CDS |
| TGGGTTATTGCTGGATCATT+TGG | 0.338863 | 3_3:-88424721 | Msa0481990:CDS |
| ACAAACAATAGGATAGCAAT+AGG | 0.343395 | 3_3:-88424348 | Msa0481990:CDS |
| CTGATTGGAACAGTTCCTTT+AGG | 0.345024 | 3_3:+88425222 | None:intergenic |
| CATGCAAGCATGGTACAATT+TGG | 0.347198 | 3_3:-88422602 | Msa0481990:CDS |
| CAGGTAAGCCCTGAATTATA+TGG | 0.356009 | 3_3:-88424557 | Msa0481990:CDS |
| TAGTACCAATAATTTGTTCA+TGG | 0.361328 | 3_3:+88422320 | None:intergenic |
| CAAACAATAGGATAGCAATA+GGG | 0.367594 | 3_3:-88424347 | Msa0481990:CDS |
| GTAAATGGAGAACAATACTA+TGG | 0.368422 | 3_3:-88424814 | Msa0481990:CDS |
| TGGTGGCTTGAATTTGGATC+AGG | 0.373348 | 3_3:-88422674 | Msa0481990:CDS |
| AGAGGGAAGAAATAATGTTT+GGG | 0.379333 | 3_3:-88422387 | Msa0481990:CDS |
| GATTTATTCAAACAAACAAT+AGG | 0.380503 | 3_3:-88424359 | Msa0481990:CDS |
| TCCCCAAGATCGTTCTATAA+TGG | 0.381347 | 3_3:-88424315 | Msa0481990:CDS |
| TTCCATTATAGAACGATCTT+GGG | 0.387160 | 3_3:+88424313 | None:intergenic |
| TGTTACAATTTACTATGTTC+GGG | 0.395711 | 3_3:-88424381 | Msa0481990:CDS |
| GATGTCCATGAACAAATTAT+TGG | 0.396912 | 3_3:-88422325 | Msa0481990:exon |
| TCACAAATATGGGTTATTGC+TGG | 0.398889 | 3_3:-88424730 | Msa0481990:CDS |
| CAGGGCTACTAGTTGGATAT+TGG | 0.399137 | 3_3:-88422655 | Msa0481990:CDS |
| GGACATCTCACATTCCTTCC+AGG | 0.406112 | 3_3:+88422341 | None:intergenic |
| TCTATCAAATATTCACCAAT+TGG | 0.419630 | 3_3:-88422438 | Msa0481990:CDS |
| ATTCAGCTTGTCACAAATAT+GGG | 0.426463 | 3_3:-88424740 | Msa0481990:CDS |
| AAACTTACAAGTAGTTGATT+GGG | 0.432328 | 3_3:-88422477 | Msa0481990:CDS |
| TCCATGGAGCATGTGGTGTT+TGG | 0.433048 | 3_3:-88431154 | Msa0481990:CDS |
| CAATCTATCAAATCTCCATC+TGG | 0.438180 | 3_3:+88425521 | None:intergenic |
| ATACCACACTGGCACACAAA+TGG | 0.444652 | 3_3:-88422549 | Msa0481990:CDS |
| GTCCAATAAGTGAAGAATCT+AGG | 0.449358 | 3_3:+88424524 | None:intergenic |
| ATGGAGCATGTGGTGTTTGG+AGG | 0.450174 | 3_3:-88431151 | Msa0481990:CDS |
| ACGGATGCATATCAAGCAAC+TGG | 0.453902 | 3_3:-88424405 | Msa0481990:CDS |
| TGTACTATAAACTTGAAGAT+TGG | 0.455860 | 3_3:-88422032 | Msa0481990:three_prime_UTR |
| GAGTCTCTCCGTACACCTCT+TGG | 0.457148 | 3_3:+88425141 | None:intergenic |
| AATTGTGAATTCACGTTCAA+GGG | 0.457948 | 3_3:-88422573 | Msa0481990:CDS |
| AAGTGACTAAACAAGTTTGC+TGG | 0.458245 | 3_3:+88422632 | None:intergenic |
| TTTGGATCAGGGCTACTAGT+TGG | 0.463916 | 3_3:-88422662 | Msa0481990:CDS |
| AGAAACTGCTCTATTCTTGA+AGG | 0.471379 | 3_3:-88431188 | Msa0481990:CDS |
| AAATTGTGAATTCACGTTCA+AGG | 0.481687 | 3_3:-88422574 | Msa0481990:CDS |
| AATTTGAATGATCAGCCAAT+TGG | 0.483000 | 3_3:+88422423 | None:intergenic |
| GATCCACCAGAAAGGCCAAA+AGG | 0.485021 | 3_3:-88425312 | Msa0481990:CDS |
| TGGAGCATGTGGTGTTTGGA+GGG | 0.487281 | 3_3:-88431150 | Msa0481990:CDS |
| AATTGGTGAATATTTGATAG+AGG | 0.492967 | 3_3:+88422440 | None:intergenic |
| TACCACACTGGCACACAAAT+GGG | 0.496511 | 3_3:-88422548 | Msa0481990:CDS |
| AATTGTCACCATATAATTCA+GGG | 0.504349 | 3_3:+88424549 | None:intergenic |
| TACATTAGAAGCAGGATGGC+AGG | 0.506403 | 3_3:-88424686 | Msa0481990:intron |
| TCATATTGATCAGTTACCCT+TGG | 0.509463 | 3_3:+88424763 | None:intergenic |
| TTTGTCCTTTGAGTAGTGGA+TGG | 0.513451 | 3_3:+88425468 | None:intergenic |
| GATCTTAATACATTAGAAGC+AGG | 0.530551 | 3_3:-88424694 | Msa0481990:CDS |
| ATCCACCAGAAAGGCCAAAA+GGG | 0.545730 | 3_3:-88425311 | Msa0481990:CDS |
| GAAGGTTTCATCGAAATCCA+TGG | 0.547099 | 3_3:-88431170 | Msa0481990:CDS |
| TCTGGTGAAGAATGTCCTAA+AGG | 0.548240 | 3_3:-88425237 | Msa0481990:CDS |
| CTTGAGAAGTCATGCAAGCA+TGG | 0.552648 | 3_3:-88422612 | Msa0481990:CDS |
| TCCAAACACCACATGCTCCA+TGG | 0.559627 | 3_3:+88431153 | None:intergenic |
| AAACAATAGGATAGCAATAG+GGG | 0.560191 | 3_3:-88424346 | Msa0481990:CDS |
| GGTGTACGGAGAGACTCAAC+AGG | 0.564244 | 3_3:-88425135 | Msa0481990:CDS |
| GCAAGCATGGTACAATTTGG+AGG | 0.566205 | 3_3:-88422599 | Msa0481990:CDS |
| GAAGAAAACCAAGAGGTGTA+CGG | 0.572169 | 3_3:-88425149 | Msa0481990:CDS |
| GGAGCATGTGGTGTTTGGAG+GGG | 0.573668 | 3_3:-88431149 | Msa0481990:intron |
| AAATTGCTATGATATAAAAG+AGG | 0.574299 | 3_3:-88422405 | Msa0481990:CDS |
| ACTGGCACACAAATGGGAAG+TGG | 0.576010 | 3_3:-88422542 | Msa0481990:CDS |
| GGTGGCTTGAATTTGGATCA+GGG | 0.578368 | 3_3:-88422673 | Msa0481990:CDS |
| TTGAGAAGTACATAGTCAGT+AGG | 0.581085 | 3_3:+88422081 | None:intergenic |
| GCATAAATGTGTGGACACCA+AGG | 0.586207 | 3_3:-88424780 | Msa0481990:CDS |
| ACCCAAAACATGGACATTGG+TGG | 0.589771 | 3_3:-88422691 | Msa0481990:CDS |
| AATTGCTATGATATAAAAGA+GGG | 0.589945 | 3_3:-88422404 | Msa0481990:CDS |
| CGTTCAAGGGGATACCACAC+TGG | 0.592249 | 3_3:-88422560 | Msa0481990:CDS |
| AGTAGTGGATGGTCAAAAGC+TGG | 0.592451 | 3_3:+88425479 | None:intergenic |
| TTTATTATGGAGGTCCTGGA+AGG | 0.592575 | 3_3:-88422355 | Msa0481990:CDS |
| TATGTATAGGACCCAAAACA+TGG | 0.593710 | 3_3:-88422701 | Msa0481990:intron |
| CGGAGAGACTCAACAGGCAA+TGG | 0.601451 | 3_3:-88425129 | Msa0481990:CDS |
| CTCAACAGGCAATGGTCATG+AGG | 0.601953 | 3_3:-88425121 | Msa0481990:intron |
| ATCGAAATCCATGGAGCATG+TGG | 0.603394 | 3_3:-88431161 | Msa0481990:CDS |
| GTTTACAGGATCCACCAGAA+AGG | 0.603971 | 3_3:-88425320 | Msa0481990:intron |
| CCAAAAGGGTATAACAACAA+TGG | 0.605463 | 3_3:-88425297 | Msa0481990:CDS |
| TCCATTATAGAACGATCTTG+GGG | 0.618212 | 3_3:+88424314 | None:intergenic |
| ATTGTGAATTCACGTTCAAG+GGG | 0.625094 | 3_3:-88422572 | Msa0481990:CDS |
| TTTGACCATCCACTACTCAA+AGG | 0.626511 | 3_3:-88425473 | Msa0481990:CDS |
| TTCCCATTTGTGTGCCAGTG+TGG | 0.628822 | 3_3:+88422546 | None:intergenic |
| AGGACCCAAAACATGGACAT+TGG | 0.633661 | 3_3:-88422694 | Msa0481990:CDS |
| CATAAATGTGTGGACACCAA+GGG | 0.646212 | 3_3:-88424779 | Msa0481990:CDS |
| GAGGGAAGAAATAATGTTTG+GGG | 0.648601 | 3_3:-88422386 | Msa0481990:CDS |
| TTAATACATTAGAAGCAGGA+TGG | 0.652720 | 3_3:-88424690 | Msa0481990:CDS |
| CAAAAGCAAGCATAAATGTG+TGG | 0.653308 | 3_3:-88424789 | Msa0481990:CDS |
| AGATTTGGAAGAAAACCAAG+AGG | 0.740571 | 3_3:-88425156 | Msa0481990:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TATTTTTAAAAAAAAAATTA+AGG | - | chr3_3:88425359-88425378 | Msa0481990:intron | 0.0% |
| !!! | ATTTTTAAAAAAAAAATTAA+GGG | - | chr3_3:88425360-88425379 | Msa0481990:intron | 0.0% |
| !!! | ATTATTGATTATTTTTATGA+AGG | - | chr3_3:88423303-88423322 | Msa0481990:intron | 10.0% |
| !!! | TTTTTTTTTTAAGGAAAAAA+TGG | - | chr3_3:88423466-88423485 | Msa0481990:intron | 10.0% |
| !!! | TATAATTTTGAAATCTAAAA+TGG | - | chr3_3:88423559-88423578 | Msa0481990:intron | 10.0% |
| !! | TACAATACAAATATAAATAA+AGG | + | chr3_3:88424418-88424437 | None:intergenic | 10.0% |
| !!! | AACATATTTTCATTTATTTA+TGG | + | chr3_3:88425113-88425132 | None:intergenic | 10.0% |
| !! | TATCTTCATATTTAAAAATT+TGG | - | chr3_3:88425286-88425305 | Msa0481990:CDS | 10.0% |
| !!! | CATATAATTAATGTTTTAAA+TGG | + | chr3_3:88426760-88426779 | None:intergenic | 10.0% |
| !! | GTAAAAATTTGTAAAATTAT+AGG | + | chr3_3:88428118-88428137 | None:intergenic | 10.0% |
| !! | TAATCAAAATATTTAAATAC+TGG | + | chr3_3:88428587-88428606 | None:intergenic | 10.0% |
| !!! | GTAAGTATTATTATTATTTT+TGG | - | chr3_3:88428701-88428720 | Msa0481990:intron | 10.0% |
| !! | AATTATAAAAAGTTAAGTAA+GGG | + | chr3_3:88429684-88429703 | None:intergenic | 10.0% |
| !! | AAATTATAAAAAGTTAAGTA+AGG | + | chr3_3:88429685-88429704 | None:intergenic | 10.0% |
| !!! | CCTTTTTTTAATAATATTTT+TGG | + | chr3_3:88429721-88429740 | None:intergenic | 10.0% |
| !! | CCAAAAATATTATTAAAAAA+AGG | - | chr3_3:88429718-88429737 | Msa0481990:intron | 10.0% |
| !!! | AATTTTAATTTGTTTAGGAT+TGG | + | chr3_3:88422272-88422291 | None:intergenic | 15.0% |
| !!! | GTTTGAATTTTAATTTGTTT+AGG | + | chr3_3:88422277-88422296 | None:intergenic | 15.0% |
| !!! | TGCAATTTTTTTTTTTTGAA+AGG | + | chr3_3:88422678-88422697 | None:intergenic | 15.0% |
| !!! | ACTTATTTTTATTTCCTTTT+TGG | + | chr3_3:88422864-88422883 | None:intergenic | 15.0% |
| !! | CTTAAAATCAAATTAATAGT+GGG | + | chr3_3:88422917-88422936 | None:intergenic | 15.0% |
| !! | ACTTAAAATCAAATTAATAG+TGG | + | chr3_3:88422918-88422937 | None:intergenic | 15.0% |
| !!! | ACTATTAATTTGATTTTAAG+TGG | - | chr3_3:88422917-88422936 | Msa0481990:intron | 15.0% |
| !!! | TGAATGGTTTTTTTTTTTTA+AGG | - | chr3_3:88423457-88423476 | Msa0481990:intron | 15.0% |
| !! | AAATATGTAGATGTATTTAT+AGG | + | chr3_3:88423914-88423933 | None:intergenic | 15.0% |
| !! | ATACAACAAATATAAAACAA+AGG | + | chr3_3:88424392-88424411 | None:intergenic | 15.0% |
| !!! | TTTTTTTTTGTTTTGAAGAA+AGG | - | chr3_3:88424948-88424967 | Msa0481990:intron | 15.0% |
| !! | ATAAGTTTAACGAAAATAAT+TGG | + | chr3_3:88425142-88425161 | None:intergenic | 15.0% |
| !!! | AAAAAACTTAATTGCAATTT+TGG | + | chr3_3:88425541-88425560 | None:intergenic | 15.0% |
| !!! | TATTTTTACTAAATGAGTTA+AGG | - | chr3_3:88425674-88425693 | Msa0481990:intron | 15.0% |
| !!! | ATTTTTACTAAATGAGTTAA+GGG | - | chr3_3:88425675-88425694 | Msa0481990:intron | 15.0% |
| !! | TACCATTTGATATAATTATT+GGG | - | chr3_3:88425783-88425802 | Msa0481990:intron | 15.0% |
| !!! | AGCATTTTTCTAAAAATTTA+TGG | - | chr3_3:88426424-88426443 | Msa0481990:intron | 15.0% |
| !!! | AAATTTTTACTATTTGTCAA+TGG | - | chr3_3:88428128-88428147 | Msa0481990:intron | 15.0% |
| !! | TTCAAAACTAAAAACATTAA+AGG | - | chr3_3:88428200-88428219 | Msa0481990:intron | 15.0% |
| !! | TCAAAACTAAAAACATTAAA+GGG | - | chr3_3:88428201-88428220 | Msa0481990:intron | 15.0% |
| !! | TTTAAATAAAAAACCCTAAT+TGG | + | chr3_3:88428989-88429008 | None:intergenic | 15.0% |
| !! | TTTATTAAAGCAATATTTCA+CGG | - | chr3_3:88429585-88429604 | Msa0481990:intron | 15.0% |
| !! | ATTATAAAAAGTTAAGTAAG+GGG | + | chr3_3:88429683-88429702 | None:intergenic | 15.0% |
| !! | TATTAAAAAAAGGTTAACAA+AGG | - | chr3_3:88429728-88429747 | Msa0481990:intron | 15.0% |
| !!! | ATTAATGTCTTATTATAAAC+TGG | + | chr3_3:88429761-88429780 | None:intergenic | 15.0% |
| !! | ACATAGTATATATGTTATAA+GGG | + | chr3_3:88430475-88430494 | None:intergenic | 15.0% |
| !! | TACATAGTATATATGTTATA+AGG | + | chr3_3:88430476-88430495 | None:intergenic | 15.0% |
| !!! | TACTATGTATTTTTATGTAT+AGG | - | chr3_3:88430487-88430506 | Msa0481990:intron | 15.0% |
| !!! | TTTTTTCTTTTGGAAATTTT+TGG | - | chr3_3:88430961-88430980 | Msa0481990:intron | 15.0% |
| !! | TTAGCAAAAAAACAAAATTA+TGG | + | chr3_3:88431034-88431053 | None:intergenic | 15.0% |
| !! | GATTTATTACGTCTAAAAAT+TGG | - | chr3_3:88422300-88422319 | Msa0481990:three_prime_UTR | 20.0% |
| !!! | AATATTTTTAAAGCTAACAG+TGG | + | chr3_3:88422343-88422362 | None:intergenic | 20.0% |
| !!! | GTAGTAATTTTTACCAAAAA+AGG | - | chr3_3:88422404-88422423 | Msa0481990:CDS | 20.0% |
| !! | GTCTTTGTATTATGAAAAAT+AGG | - | chr3_3:88422619-88422638 | Msa0481990:CDS | 20.0% |
| !!! | ACAATTATTGACTATTTACA+TGG | - | chr3_3:88423327-88423346 | Msa0481990:intron | 20.0% |
| !! | TTGATTTCAACAACAAAAAA+TGG | - | chr3_3:88423433-88423452 | Msa0481990:intron | 20.0% |
| !!! | AATTTTGAAATCTAAAATGG+TGG | - | chr3_3:88423562-88423581 | Msa0481990:intron | 20.0% |
| !! | GCACATTTCTATAATTTATT+GGG | + | chr3_3:88423591-88423610 | None:intergenic | 20.0% |
| !! | AGCACATTTCTATAATTTAT+TGG | + | chr3_3:88423592-88423611 | None:intergenic | 20.0% |
| !!! | TTTCTTTTCAATATTCTCTT+TGG | - | chr3_3:88424005-88424024 | Msa0481990:intron | 20.0% |
| !!! | TTCTTTTCAATATTCTCTTT+GGG | - | chr3_3:88424006-88424025 | Msa0481990:intron | 20.0% |
| !! | AAGATAATAGATGTTGTAAA+TGG | - | chr3_3:88424820-88424839 | Msa0481990:CDS | 20.0% |
| !! | TACTAGTAGTATTAGTATTA+CGG | - | chr3_3:88425197-88425216 | Msa0481990:CDS | 20.0% |
| !! | TAGATCAAATATTTGACAAA+TGG | + | chr3_3:88425321-88425340 | None:intergenic | 20.0% |
| !!! | TCTTTATCTTTTTCCATTAT+CGG | - | chr3_3:88425406-88425425 | Msa0481990:intron | 20.0% |
| !! | TAATTTATTTATGTATTGCC+TGG | - | chr3_3:88425760-88425779 | Msa0481990:intron | 20.0% |
| !! | GTACCATTTGATATAATTAT+TGG | - | chr3_3:88425782-88425801 | Msa0481990:intron | 20.0% |
| !!! | ATAAATCGACTTTATGATTA+TGG | + | chr3_3:88425864-88425883 | None:intergenic | 20.0% |
| !! | AGTGAAAAGACAAATAAATT+TGG | - | chr3_3:88426109-88426128 | Msa0481990:intron | 20.0% |
| !!! | TTTTTCGTATGAAAAAAGTT+TGG | + | chr3_3:88426136-88426155 | None:intergenic | 20.0% |
| !! | GTTTAAGTAATCATGTTATA+TGG | + | chr3_3:88426240-88426259 | None:intergenic | 20.0% |
| !!! | GAAATTTTGTCTGAAAATAT+AGG | - | chr3_3:88426311-88426330 | Msa0481990:intron | 20.0% |
| !!! | AAAAGTAATAACTTTTGCAT+AGG | + | chr3_3:88426371-88426390 | None:intergenic | 20.0% |
| !!! | TATGCAAAAGTTATTACTTT+TGG | - | chr3_3:88426370-88426389 | Msa0481990:intron | 20.0% |
| !! | AATTAATCATGTTAGTAGTT+AGG | + | chr3_3:88426507-88426526 | None:intergenic | 20.0% |
| !! | AACATGATTAATTTAACGAT+TGG | - | chr3_3:88426514-88426533 | Msa0481990:intron | 20.0% |
| !! | TTATAGTTTGAAAACAAACT+TGG | - | chr3_3:88427068-88427087 | Msa0481990:intron | 20.0% |
| !! | ATGATAAAAACATGTTACAT+TGG | + | chr3_3:88427783-88427802 | None:intergenic | 20.0% |
| !!! | ATAGTCTTAAAAAAGAACTA+AGG | - | chr3_3:88427801-88427820 | Msa0481990:intron | 20.0% |
| !! | TACATGCTTATTATTAGTAA+CGG | + | chr3_3:88428614-88428633 | None:intergenic | 20.0% |
| !! | CGATATTTAAATTTGATAGA+CGG | - | chr3_3:88428777-88428796 | Msa0481990:intron | 20.0% |
| !! | ATGTTACAATTTACTATGTT+CGG | - | chr3_3:88428819-88428838 | Msa0481990:intron | 20.0% |
| !! | GATTTATTCAAACAAACAAT+AGG | - | chr3_3:88428842-88428861 | Msa0481990:intron | 20.0% |
| !! | TTAATTCCTTAAATTATCAC+TGG | + | chr3_3:88429173-88429192 | None:intergenic | 20.0% |
| !!! | CAAACTTTTTCAATTCTTAA+TGG | + | chr3_3:88429412-88429431 | None:intergenic | 20.0% |
| !! | GTGAAATATTGCTTTAATAA+AGG | + | chr3_3:88429586-88429605 | None:intergenic | 20.0% |
| !!! | AGCTTTGATGTTAATTATTT+AGG | + | chr3_3:88429660-88429679 | None:intergenic | 20.0% |
| !! | ATTAATTAATTGACCCATAA+GGG | - | chr3_3:88429775-88429794 | Msa0481990:intron | 20.0% |
| !!! | ATTTTTGTATTATGCAACTA+TGG | - | chr3_3:88429964-88429983 | Msa0481990:intron | 20.0% |
| !! | CATAGTATATATGTTATAAG+GGG | + | chr3_3:88430474-88430493 | None:intergenic | 20.0% |
| !! | AAATTGCTATGATATAAAAG+AGG | - | chr3_3:88430796-88430815 | Msa0481990:intron | 20.0% |
| !! | AATTGCTATGATATAAAAGA+GGG | - | chr3_3:88430797-88430816 | Msa0481990:intron | 20.0% |
| !! | TCCAAAAGAAAAAAAAAAGT+GGG | + | chr3_3:88430955-88430974 | None:intergenic | 20.0% |
| !! | TTCCAAAAGAAAAAAAAAAG+TGG | + | chr3_3:88430956-88430975 | None:intergenic | 20.0% |
| !!! | ATTTTATTACTAGCTTCATA+TGG | - | chr3_3:88430985-88431004 | Msa0481990:intron | 20.0% |
| ! | AAATCTCACCTTATGAATTA+TGG | - | chr3_3:88422218-88422237 | Msa0481990:three_prime_UTR | 25.0% |
| ! | TCATGATTCCATAATTCATA+AGG | + | chr3_3:88422229-88422248 | None:intergenic | 25.0% |
| !!! | ATTTTTTTCCCAAGTAATAG+AGG | - | chr3_3:88422380-88422399 | Msa0481990:CDS | 25.0% |
| ! | ACAATTCATATAACTGATGT+GGG | + | chr3_3:88422502-88422521 | None:intergenic | 25.0% |
| ! | ATTGACATCAGTTAACTTAA+CGG | - | chr3_3:88422562-88422581 | Msa0481990:CDS | 25.0% |
| !!! | ATGACGTTTATTTTTGGATT+GGG | + | chr3_3:88422734-88422753 | None:intergenic | 25.0% |
| !!! | AATGACGTTTATTTTTGGAT+TGG | + | chr3_3:88422735-88422754 | None:intergenic | 25.0% |
| !!! | CATTCAATGACGTTTATTTT+TGG | + | chr3_3:88422740-88422759 | None:intergenic | 25.0% |
| ! | ATTAAACCAATTACTTACCT+CGG | + | chr3_3:88423054-88423073 | None:intergenic | 25.0% |
| ! | ACACGTACATTATTCTTAAA+CGG | + | chr3_3:88423213-88423232 | None:intergenic | 25.0% |
| ! | AACAACAAAAAATGGATGAA+TGG | - | chr3_3:88423441-88423460 | Msa0481990:intron | 25.0% |
| ! | AAAATTTGGTAGAAAACATG+TGG | + | chr3_3:88423838-88423857 | None:intergenic | 25.0% |
| ! | GTCAAAAAACGTGTAAAATT+TGG | + | chr3_3:88423852-88423871 | None:intergenic | 25.0% |
| ! | ATGTGGTAAATACCATTAAT+GGG | + | chr3_3:88423874-88423893 | None:intergenic | 25.0% |
| ! | TATGTGGTAAATACCATTAA+TGG | + | chr3_3:88423875-88423894 | None:intergenic | 25.0% |
| ! | TAGAAATGGTATAGTATATG+TGG | + | chr3_3:88423891-88423910 | None:intergenic | 25.0% |
| ! | GATGTATTTATAGGTAGAAA+TGG | + | chr3_3:88423905-88423924 | None:intergenic | 25.0% |
| !! | TCTTTTCAATATTCTCTTTG+GGG | - | chr3_3:88424007-88424026 | Msa0481990:intron | 25.0% |
| !!! | TACTTATTTTATCCTTCTTG+GGG | + | chr3_3:88424268-88424287 | None:intergenic | 25.0% |
| !!! | CTACTTATTTTATCCTTCTT+GGG | + | chr3_3:88424269-88424288 | None:intergenic | 25.0% |
| !!! | TCTACTTATTTTATCCTTCT+TGG | + | chr3_3:88424270-88424289 | None:intergenic | 25.0% |
| ! | AAAACAAAGGAACAAAATTG+AGG | + | chr3_3:88424379-88424398 | None:intergenic | 25.0% |
| ! | TACAACATCTATTATCTTGT+TGG | + | chr3_3:88424818-88424837 | None:intergenic | 25.0% |
| ! | TGACATGGTTGATTATTAAA+AGG | - | chr3_3:88424975-88424994 | Msa0481990:intron | 25.0% |
| ! | GACATGGTTGATTATTAAAA+GGG | - | chr3_3:88424976-88424995 | Msa0481990:intron | 25.0% |
| !!! | TCACCTTATTTTACACTAAT+GGG | - | chr3_3:88425086-88425105 | Msa0481990:intron | 25.0% |
| !! | CTTTATCTTTTTCCATTATC+GGG | - | chr3_3:88425407-88425426 | Msa0481990:intron | 25.0% |
| !!! | TTTTGTTGTTTTGAAAACGA+AGG | - | chr3_3:88425578-88425597 | Msa0481990:intron | 25.0% |
| ! | AATTACTTGTACTACTCTTT+CGG | + | chr3_3:88425745-88425764 | None:intergenic | 25.0% |
| ! | TAATTATATCAAATGGTACC+AGG | + | chr3_3:88425781-88425800 | None:intergenic | 25.0% |
| ! | TGCCCAATAATTATATCAAA+TGG | + | chr3_3:88425788-88425807 | None:intergenic | 25.0% |
| ! | TTTGATATAATTATTGGGCA+TGG | - | chr3_3:88425788-88425807 | Msa0481990:intron | 25.0% |
| !! | AACATCAAAGCAACTTTTAT+TGG | + | chr3_3:88425815-88425834 | None:intergenic | 25.0% |
| !! | ATAAAAGTTGCTTTGATGTT+TGG | - | chr3_3:88425815-88425834 | Msa0481990:intron | 25.0% |
| !! | ATCATAAAGTCGATTTATCT+TGG | - | chr3_3:88425866-88425885 | Msa0481990:intron | 25.0% |
| !! | TCATAAAGTCGATTTATCTT+GGG | - | chr3_3:88425867-88425886 | Msa0481990:intron | 25.0% |
| ! | GAATACTCCTAATTATTATG+TGG | + | chr3_3:88425966-88425985 | None:intergenic | 25.0% |
| ! | CATTGTTATCTATCTATTGA+TGG | + | chr3_3:88426041-88426060 | None:intergenic | 25.0% |
| ! | CAATAGATAGATAACAATGT+TGG | - | chr3_3:88426042-88426061 | Msa0481990:intron | 25.0% |
| ! | CATACGAAAAAAAGTTTAAC+CGG | - | chr3_3:88426145-88426164 | Msa0481990:intron | 25.0% |
| !! | CAGACAAAATTTCTTTTTGT+GGG | + | chr3_3:88426304-88426323 | None:intergenic | 25.0% |
| !! | TCAGACAAAATTTCTTTTTG+TGG | + | chr3_3:88426305-88426324 | None:intergenic | 25.0% |
| ! | GGGTAAATTAAAGTAAAACA+TGG | - | chr3_3:88426899-88426918 | Msa0481990:intron | 25.0% |
| ! | AAGGATATTATTCAGTTTCT+TGG | - | chr3_3:88427136-88427155 | Msa0481990:intron | 25.0% |
| !! | AATAGGTGATAGAGTATTTA+GGG | + | chr3_3:88427307-88427326 | None:intergenic | 25.0% |
| ! | GTAACAAAAACATGTAGAAT+AGG | + | chr3_3:88427324-88427343 | None:intergenic | 25.0% |
| ! | TCTAAAAGTTTGGTTAGAAT+TGG | + | chr3_3:88427439-88427458 | None:intergenic | 25.0% |
| ! | GATGAAAATGTAATTACCAA+TGG | + | chr3_3:88427761-88427780 | None:intergenic | 25.0% |
| ! | GAATTGAATTTAAGAGTAAG+AGG | - | chr3_3:88427852-88427871 | Msa0481990:intron | 25.0% |
| ! | TGAAATTCAATATTGAGCTT+TGG | + | chr3_3:88428184-88428203 | None:intergenic | 25.0% |
| ! | ACACACAAAAAATATCCATT+AGG | - | chr3_3:88428280-88428299 | Msa0481990:intron | 25.0% |
| !! | AAGCATGTATATTTTCTTTC+AGG | - | chr3_3:88428625-88428644 | Msa0481990:intron | 25.0% |
| ! | AATTGTCACCATATAATTCA+GGG | + | chr3_3:88428655-88428674 | None:intergenic | 25.0% |
| ! | TAATTGTCACCATATAATTC+AGG | + | chr3_3:88428656-88428675 | None:intergenic | 25.0% |
| ! | TGTTACAATTTACTATGTTC+GGG | - | chr3_3:88428820-88428839 | Msa0481990:intron | 25.0% |
| ! | AATGGAAGACAATTTGATAT+TGG | - | chr3_3:88428904-88428923 | Msa0481990:intron | 25.0% |
| !!! | TTGATATTGGCTTAATGATT+TGG | - | chr3_3:88428917-88428936 | Msa0481990:intron | 25.0% |
| ! | ATTGCATGGTAAAAATAAGA+GGG | + | chr3_3:88428959-88428978 | None:intergenic | 25.0% |
| ! | AATTGCATGGTAAAAATAAG+AGG | + | chr3_3:88428960-88428979 | None:intergenic | 25.0% |
| !!! | TAATTGGTGTTAAAATTGCA+TGG | + | chr3_3:88428973-88428992 | None:intergenic | 25.0% |
| !!! | ATGCAATTTTAACACCAATT+AGG | - | chr3_3:88428972-88428991 | Msa0481990:intron | 25.0% |
| !!! | TGCAATTTTAACACCAATTA+GGG | - | chr3_3:88428973-88428992 | Msa0481990:intron | 25.0% |
| ! | TGATTTATACCAATCTACTT+GGG | + | chr3_3:88429112-88429131 | None:intergenic | 25.0% |
| ! | ATGATTTATACCAATCTACT+TGG | + | chr3_3:88429113-88429132 | None:intergenic | 25.0% |
| ! | TAAACACCAGTGATAATTTA+AGG | - | chr3_3:88429164-88429183 | Msa0481990:intron | 25.0% |
| ! | CAGAGAAAATTTCAAAAGAA+TGG | + | chr3_3:88429475-88429494 | None:intergenic | 25.0% |
| !!! | AACTCATTGCTTTTTAACAT+TGG | - | chr3_3:88429610-88429629 | Msa0481990:intron | 25.0% |
| ! | CATTAATTAATTGACCCATA+AGG | - | chr3_3:88429774-88429793 | Msa0481990:intron | 25.0% |
| ! | TTAATTAATTGACCCATAAG+GGG | - | chr3_3:88429776-88429795 | Msa0481990:intron | 25.0% |
| ! | ACTCAATTACTAAAGTCTTA+GGG | + | chr3_3:88429938-88429957 | None:intergenic | 25.0% |
| ! | AACTCAATTACTAAAGTCTT+AGG | + | chr3_3:88429939-88429958 | None:intergenic | 25.0% |
| ! | CATTGTGATTTAGATTAGAT+GGG | + | chr3_3:88430070-88430089 | None:intergenic | 25.0% |
| ! | TGTTATAACTAGTGTTCAAA+GGG | + | chr3_3:88430143-88430162 | None:intergenic | 25.0% |
| ! | ATGTTATAACTAGTGTTCAA+AGG | + | chr3_3:88430144-88430163 | None:intergenic | 25.0% |
| ! | TTGAACACTAGTTATAACAT+AGG | - | chr3_3:88430144-88430163 | Msa0481990:intron | 25.0% |
| ! | TGAACACTAGTTATAACATA+GGG | - | chr3_3:88430145-88430164 | Msa0481990:intron | 25.0% |
| ! | AAACTTACAAGTAGTTGATT+GGG | - | chr3_3:88430724-88430743 | Msa0481990:intron | 25.0% |
| ! | AATTGGTGAATATTTGATAG+AGG | + | chr3_3:88430764-88430783 | None:intergenic | 25.0% |
| ! | TCTATCAAATATTCACCAAT+TGG | - | chr3_3:88430763-88430782 | Msa0481990:intron | 25.0% |
| !!! | TGGGGAACTTATTTTTATTA+TGG | - | chr3_3:88430833-88430852 | Msa0481990:intron | 25.0% |
| !!! | GGAACTTATTTTTATTATGG+AGG | - | chr3_3:88430836-88430855 | Msa0481990:intron | 25.0% |
| !!! | TAGTACCAATAATTTGTTCA+TGG | + | chr3_3:88430884-88430903 | None:intergenic | 25.0% |
| !!! | TCCCACTTTTTTTTTTCTTT+TGG | - | chr3_3:88430951-88430970 | Msa0481990:intron | 25.0% |
| !!! | TTAGAGACACTTTGTTATTA+AGG | - | chr3_3:88431058-88431077 | Msa0481990:intron | 25.0% |
| ! | TGTACTATAAACTTGAAGAT+TGG | - | chr3_3:88431169-88431188 | Msa0481990:CDS | 25.0% |
| GTAAAAGACATTTCTACACT+AGG | - | chr3_3:88422080-88422099 | Msa0481990:three_prime_UTR | 30.0% | |
| ATATGATTGAGATGGATGAA+AGG | - | chr3_3:88422108-88422127 | Msa0481990:three_prime_UTR | 30.0% | |
| GAACATAACTTGATTAGTAG+CGG | - | chr3_3:88422143-88422162 | Msa0481990:three_prime_UTR | 30.0% | |
| TTACTACTCCTCTATTACTT+GGG | + | chr3_3:88422391-88422410 | None:intergenic | 30.0% | |
| ATTACTACTCCTCTATTACT+TGG | + | chr3_3:88422392-88422411 | None:intergenic | 30.0% | |
| ! | CTGTACTCTTTTTCCTTTTT+TGG | + | chr3_3:88422420-88422439 | None:intergenic | 30.0% |
| ACGACCTATTTAATTCTCAA+AGG | - | chr3_3:88422450-88422469 | Msa0481990:CDS | 30.0% | |
| ! | CAGTCCTTTGAGAATTAAAT+AGG | + | chr3_3:88422457-88422476 | None:intergenic | 30.0% |
| CTATTTAATTCTCAAAGGAC+TGG | - | chr3_3:88422455-88422474 | Msa0481990:CDS | 30.0% | |
| GACAATTCATATAACTGATG+TGG | + | chr3_3:88422503-88422522 | None:intergenic | 30.0% | |
| GTTAAGTTAACTGATGTCAA+TGG | + | chr3_3:88422563-88422582 | None:intergenic | 30.0% | |
| ! | GTTAGCTTAATGCAATGATT+AGG | + | chr3_3:88422653-88422672 | None:intergenic | 30.0% |
| CTTAATACTCGATAGAAACA+TGG | + | chr3_3:88422825-88422844 | None:intergenic | 30.0% | |
| TCAAGATCAATGATCGATAT+TGG | - | chr3_3:88422941-88422960 | Msa0481990:intron | 30.0% | |
| ! | CTAGATGTTCTTTTATAGCA+AGG | - | chr3_3:88423100-88423119 | Msa0481990:intron | 30.0% |
| CCGAATAGATTCTATTGTTA+GGG | + | chr3_3:88423268-88423287 | None:intergenic | 30.0% | |
| CCCTAACAATAGAATCTATT+CGG | - | chr3_3:88423265-88423284 | Msa0481990:intron | 30.0% | |
| TCCGAATAGATTCTATTGTT+AGG | + | chr3_3:88423269-88423288 | None:intergenic | 30.0% | |
| ACAATAGAATCTATTCGGAT+TGG | - | chr3_3:88423270-88423289 | Msa0481990:intron | 30.0% | |
| !!! | CTGAAGAACAAACGTTTTTT+TGG | - | chr3_3:88423785-88423804 | Msa0481990:intron | 30.0% |
| GAAGAAAGAAGAGAAATAGA+GGG | + | chr3_3:88423983-88424002 | None:intergenic | 30.0% | |
| AGAAGAAAGAAGAGAAATAG+AGG | + | chr3_3:88423984-88424003 | None:intergenic | 30.0% | |
| !! | AATATTCTCTTTGGGGTAAA+AGG | - | chr3_3:88424014-88424033 | Msa0481990:intron | 30.0% |
| ! | CAGGTTTAAAATTATCCCAA+GGG | + | chr3_3:88424095-88424114 | None:intergenic | 30.0% |
| ! | ACAGGTTTAAAATTATCCCA+AGG | + | chr3_3:88424096-88424115 | None:intergenic | 30.0% |
| AAAATACATCATCAACCCTT+GGG | + | chr3_3:88424194-88424213 | None:intergenic | 30.0% | |
| AAAAAGTGAACAATCTTCGT+GGG | + | chr3_3:88424244-88424263 | None:intergenic | 30.0% | |
| TAAAAAGTGAACAATCTTCG+TGG | + | chr3_3:88424245-88424264 | None:intergenic | 30.0% | |
| ! | GTATAATAAACGTGTTGTTG+TGG | - | chr3_3:88424853-88424872 | Msa0481990:intron | 30.0% |
| TTGAAGAAAGGATTATGACA+TGG | - | chr3_3:88424960-88424979 | Msa0481990:intron | 30.0% | |
| TTTCATGAAAACTTACACGA+TGG | + | chr3_3:88425014-88425033 | None:intergenic | 30.0% | |
| !!! | ATTGACTTTTGAGTTGTTGT+CGG | + | chr3_3:88425050-88425069 | None:intergenic | 30.0% |
| GTAAAATAAGGTGAGTATCA+AGG | + | chr3_3:88425080-88425099 | None:intergenic | 30.0% | |
| !!! | CTCACCTTATTTTACACTAA+TGG | - | chr3_3:88425085-88425104 | Msa0481990:intron | 30.0% |
| GCAATTAATAATACGAGTAG+AGG | - | chr3_3:88425909-88425928 | Msa0481990:intron | 30.0% | |
| CTTCAATTCAACTTTCATCT+GGG | + | chr3_3:88426076-88426095 | None:intergenic | 30.0% | |
| ACTTCAATTCAACTTTCATC+TGG | + | chr3_3:88426077-88426096 | None:intergenic | 30.0% | |
| !! | CATTTGCTATAGTGTTAAAC+CGG | + | chr3_3:88426167-88426186 | None:intergenic | 30.0% |
| TGACTAAATGTTATGTAGCT+TGG | - | chr3_3:88426185-88426204 | Msa0481990:intron | 30.0% | |
| !! | TTTTTCAAACTCTCCAACAA+TGG | + | chr3_3:88426678-88426697 | None:intergenic | 30.0% |
| ATGTTGAATTCAATCGTAAG+TGG | + | chr3_3:88426833-88426852 | None:intergenic | 30.0% | |
| ! | CTTTAATTTACCCTTCCAAA+GGG | + | chr3_3:88426892-88426911 | None:intergenic | 30.0% |
| ! | ACTTTAATTTACCCTTCCAA+AGG | + | chr3_3:88426893-88426912 | None:intergenic | 30.0% |
| ! | GGTAGTACTTAAGTTTTTCA+TGG | - | chr3_3:88426964-88426983 | Msa0481990:intron | 30.0% |
| ! | TACTTAAGTTTTTCATGGTG+TGG | - | chr3_3:88426969-88426988 | Msa0481990:intron | 30.0% |
| ! | ACTTAAGTTTTTCATGGTGT+GGG | - | chr3_3:88426970-88426989 | Msa0481990:intron | 30.0% |
| AGTTTGAAAACAAACTTGGT+AGG | - | chr3_3:88427072-88427091 | Msa0481990:intron | 30.0% | |
| !! | CATGATTTTCTTGTTTGCAT+TGG | + | chr3_3:88427218-88427237 | None:intergenic | 30.0% |
| ! | GAATAGGTGATAGAGTATTT+AGG | + | chr3_3:88427308-88427327 | None:intergenic | 30.0% |
| TGACAAAATTGGACTAATTG+AGG | + | chr3_3:88427364-88427383 | None:intergenic | 30.0% | |
| ! | TGAAGTTGAATTTGAGACAA+CGG | + | chr3_3:88427391-88427410 | None:intergenic | 30.0% |
| AATTTATGCAATGCAACATC+TGG | + | chr3_3:88427462-88427481 | None:intergenic | 30.0% | |
| AATGCCTTAATTGTCTTGAT+GGG | + | chr3_3:88427525-88427544 | None:intergenic | 30.0% | |
| AAATGCCTTAATTGTCTTGA+TGG | + | chr3_3:88427526-88427545 | None:intergenic | 30.0% | |
| ATTTAAGAGTAAGAGGCTTA+AGG | - | chr3_3:88427859-88427878 | Msa0481990:intron | 30.0% | |
| CAACAAATAACTTTCAGCTT+TGG | - | chr3_3:88427935-88427954 | Msa0481990:intron | 30.0% | |
| !!! | TGTCACTTTTTGATGCAAAT+AGG | + | chr3_3:88428249-88428268 | None:intergenic | 30.0% |
| AAAAAATATCCATTAGGAGC+TGG | - | chr3_3:88428286-88428305 | Msa0481990:intron | 30.0% | |
| !!! | AATTTTTTTCCAGCTCCTAA+TGG | + | chr3_3:88428298-88428317 | None:intergenic | 30.0% |
| ATTAGGAGCTGGAAAAAAAT+TGG | - | chr3_3:88428297-88428316 | Msa0481990:intron | 30.0% | |
| !!! | CATGCAGTTGTTTTTGTAAA+TGG | - | chr3_3:88428372-88428391 | Msa0481990:intron | 30.0% |
| GTAAATGGAGAACAATACTA+TGG | - | chr3_3:88428387-88428406 | Msa0481990:intron | 30.0% | |
| AATTCAGCTTGTCACAAATA+TGG | - | chr3_3:88428460-88428479 | Msa0481990:intron | 30.0% | |
| ATTCAGCTTGTCACAAATAT+GGG | - | chr3_3:88428461-88428480 | Msa0481990:intron | 30.0% | |
| GATCTTAATACATTAGAAGC+AGG | - | chr3_3:88428507-88428526 | Msa0481990:intron | 30.0% | |
| TTAATACATTAGAAGCAGGA+TGG | - | chr3_3:88428511-88428530 | Msa0481990:intron | 30.0% | |
| ATCCTAGATTCTTCACTTAT+TGG | - | chr3_3:88428675-88428694 | Msa0481990:intron | 30.0% | |
| AAGAGTGAATTTAGAAGCAA+AGG | + | chr3_3:88428734-88428753 | None:intergenic | 30.0% | |
| ACAAACAATAGGATAGCAAT+AGG | - | chr3_3:88428853-88428872 | Msa0481990:intron | 30.0% | |
| CAAACAATAGGATAGCAATA+GGG | - | chr3_3:88428854-88428873 | Msa0481990:intron | 30.0% | |
| AAACAATAGGATAGCAATAG+GGG | - | chr3_3:88428855-88428874 | Msa0481990:intron | 30.0% | |
| TTCCATTATAGAACGATCTT+GGG | + | chr3_3:88428891-88428910 | None:intergenic | 30.0% | |
| ACACAAAAGCCTAATACTTT+GGG | - | chr3_3:88429285-88429304 | Msa0481990:intron | 30.0% | |
| ACAAAAAAAGTTAAGCAAGC+AGG | - | chr3_3:88429380-88429399 | Msa0481990:intron | 30.0% | |
| ATACGAATTATTGCTTCACT+TGG | + | chr3_3:88429438-88429457 | None:intergenic | 30.0% | |
| ! | CTGTGTTAGTGTTATTCAAA+TGG | - | chr3_3:88429492-88429511 | Msa0481990:intron | 30.0% |
| CCATTGTGATTTAGATTAGA+TGG | + | chr3_3:88430071-88430090 | None:intergenic | 30.0% | |
| CCATCTAATCTAAATCACAA+TGG | - | chr3_3:88430068-88430087 | Msa0481990:intron | 30.0% | |
| GAACACTAGTTATAACATAG+GGG | - | chr3_3:88430146-88430165 | Msa0481990:intron | 30.0% | |
| TTGCATATTATCTGCATTCA+GGG | + | chr3_3:88430219-88430238 | None:intergenic | 30.0% | |
| TTTGCATATTATCTGCATTC+AGG | + | chr3_3:88430220-88430239 | None:intergenic | 30.0% | |
| ACTAACAAAGTCTACATTCA+GGG | - | chr3_3:88430372-88430391 | Msa0481990:intron | 30.0% | |
| TTTGCAATTTATCTGCATTC+AGG | - | chr3_3:88430400-88430419 | Msa0481990:intron | 30.0% | |
| TTGCAATTTATCTGCATTCA+GGG | - | chr3_3:88430401-88430420 | Msa0481990:intron | 30.0% | |
| AAATTGTGAATTCACGTTCA+AGG | - | chr3_3:88430627-88430646 | Msa0481990:intron | 30.0% | |
| AATTGTGAATTCACGTTCAA+GGG | - | chr3_3:88430628-88430647 | Msa0481990:intron | 30.0% | |
| GAAACTTACAAGTAGTTGAT+TGG | - | chr3_3:88430723-88430742 | Msa0481990:intron | 30.0% | |
| AATTTGAATGATCAGCCAAT+TGG | + | chr3_3:88430781-88430800 | None:intergenic | 30.0% | |
| AAGAGGGAAGAAATAATGTT+TGG | - | chr3_3:88430813-88430832 | Msa0481990:intron | 30.0% | |
| AGAGGGAAGAAATAATGTTT+GGG | - | chr3_3:88430814-88430833 | Msa0481990:intron | 30.0% | |
| !! | TATTTTTATTATGGAGGTCC+TGG | - | chr3_3:88430842-88430861 | Msa0481990:intron | 30.0% |
| GATGTCCATGAACAAATTAT+TGG | - | chr3_3:88430876-88430895 | Msa0481990:intron | 30.0% | |
| ! | ATTACTAGCTTCATATGGTT+TGG | - | chr3_3:88430990-88431009 | Msa0481990:intron | 30.0% |
| AGAAACTGCTCTATTCTTGA+AGG | - | chr3_3:88422013-88422032 | Msa0481990:three_prime_UTR | 35.0% | |
| AGGTCACTATATGATTGAGA+TGG | - | chr3_3:88422100-88422119 | Msa0481990:three_prime_UTR | 35.0% | |
| TTGAGATGGATGAAAGGTTT+AGG | - | chr3_3:88422114-88422133 | Msa0481990:three_prime_UTR | 35.0% | |
| ! | AATTTGTTTAGGATTGGCGT+CGG | + | chr3_3:88422266-88422285 | None:intergenic | 35.0% |
| AGTTAACTGATGTCAATGGA+CGG | + | chr3_3:88422559-88422578 | None:intergenic | 35.0% | |
| CAAAACTACTCAGCTAAACT+TGG | - | chr3_3:88422597-88422616 | Msa0481990:CDS | 35.0% | |
| CATATTGTCGATCACCAAAA+AGG | - | chr3_3:88422847-88422866 | Msa0481990:intron | 35.0% | |
| AAGATGATTGAGTTTCTCGA+TGG | - | chr3_3:88422981-88423000 | Msa0481990:intron | 35.0% | |
| ! | ATCAAGTGAATTTTTGACCG+AGG | - | chr3_3:88423034-88423053 | Msa0481990:intron | 35.0% |
| ! | TTTTGACCGAGGTAAGTAAT+TGG | - | chr3_3:88423045-88423064 | Msa0481990:intron | 35.0% |
| TCGTCGAATGATTTACGATT+GGG | - | chr3_3:88423158-88423177 | Msa0481990:intron | 35.0% | |
| !! | ATGATTTACGATTGGGTTGA+CGG | - | chr3_3:88423165-88423184 | Msa0481990:intron | 35.0% |
| ! | AACTAACGCAAGGGTATATT+TGG | + | chr3_3:88423653-88423672 | None:intergenic | 35.0% |
| !!! | ACAAACGTTTTTTTGGTCTG+TGG | - | chr3_3:88423792-88423811 | Msa0481990:intron | 35.0% |
| !!! | CACGTTTTTTGACCCATTAA+TGG | - | chr3_3:88423859-88423878 | Msa0481990:intron | 35.0% |
| ! | AAAAGGTGATCAATTTTCGC+CGG | - | chr3_3:88424031-88424050 | Msa0481990:intron | 35.0% |
| GTTTCTGCGGTTAAAAAAAC+AGG | + | chr3_3:88424114-88424133 | None:intergenic | 35.0% | |
| !! | ACAGCTTTAAATTTAGCCCA+AGG | - | chr3_3:88424175-88424194 | Msa0481990:intron | 35.0% |
| !! | CAGCTTTAAATTTAGCCCAA+GGG | - | chr3_3:88424176-88424195 | Msa0481990:intron | 35.0% |
| GAAAATACATCATCAACCCT+TGG | + | chr3_3:88424195-88424214 | None:intergenic | 35.0% | |
| ! | ATGATGTATTTTCCCCAAGA+AGG | - | chr3_3:88424202-88424221 | Msa0481990:intron | 35.0% |
| AAAAGTGAACAATCTTCGTG+GGG | + | chr3_3:88424243-88424262 | None:intergenic | 35.0% | |
| CAATTGCAATTTGCAGCTTA+TGG | - | chr3_3:88424912-88424931 | Msa0481990:intron | 35.0% | |
| !!! | TTGACTTTTGAGTTGTTGTC+GGG | + | chr3_3:88425049-88425068 | None:intergenic | 35.0% |
| GGACCCATTAGTGTAAAATA+AGG | + | chr3_3:88425092-88425111 | None:intergenic | 35.0% | |
| AGTAGTCTAGTACTAATGAG+AGG | + | chr3_3:88425181-88425200 | None:intergenic | 35.0% | |
| CAAATCCTCAAAACAGTGAA+AGG | - | chr3_3:88425507-88425526 | Msa0481990:CDS | 35.0% | |
| !! | ATGTTTGGTGCATATTACAG+TGG | - | chr3_3:88425830-88425849 | Msa0481990:intron | 35.0% |
| TATACCTTGTTCCAATGCTA+CGG | + | chr3_3:88425988-88426007 | None:intergenic | 35.0% | |
| ! | CTTAAGACACTTGTTAGCAA+GGG | + | chr3_3:88426265-88426284 | None:intergenic | 35.0% |
| CTTGCTAACAAGTGTCTTAA+GGG | - | chr3_3:88426264-88426283 | Msa0481990:intron | 35.0% | |
| GATGCTTAAACAATGCTCTA+AGG | - | chr3_3:88426392-88426411 | Msa0481990:intron | 35.0% | |
| ATTAAATTCGACCGTTGAGA+AGG | - | chr3_3:88426538-88426557 | Msa0481990:intron | 35.0% | |
| ATCATTTACGTCCTTCTCAA+CGG | + | chr3_3:88426552-88426571 | None:intergenic | 35.0% | |
| GCAACAACATAGTTGTTACA+TGG | + | chr3_3:88426584-88426603 | None:intergenic | 35.0% | |
| TATGTTGTTGCACAGTGTAA+CGG | - | chr3_3:88426593-88426612 | Msa0481990:intron | 35.0% | |
| ! | TGGAGAGTTTGAAAAAGCAT+TGG | - | chr3_3:88426682-88426701 | Msa0481990:intron | 35.0% |
| ! | ACGTGATACTCTTTCTTTTG+TGG | + | chr3_3:88426735-88426754 | None:intergenic | 35.0% |
| ! | AACAACCCTTCTTTTCTAAC+TGG | + | chr3_3:88427049-88427068 | None:intergenic | 35.0% |
| ! | CATTGTTCTTCTGTTTTGTG+TGG | - | chr3_3:88427107-88427126 | Msa0481990:intron | 35.0% |
| ! | CTGTTTTGTGTGGATATGAA+AGG | - | chr3_3:88427117-88427136 | Msa0481990:intron | 35.0% |
| ! | TGATAGAGTATTTAGGGAAG+TGG | + | chr3_3:88427301-88427320 | None:intergenic | 35.0% |
| ! | AAGTTGAATTTGAGACAACG+GGG | + | chr3_3:88427389-88427408 | None:intergenic | 35.0% |
| ! | GAAGTTGAATTTGAGACAAC+GGG | + | chr3_3:88427390-88427409 | None:intergenic | 35.0% |
| CAACATCTGGTCTAAAAGTT+TGG | + | chr3_3:88427449-88427468 | None:intergenic | 35.0% | |
| ATTCACATCACTGAATCACA+AGG | + | chr3_3:88427632-88427651 | None:intergenic | 35.0% | |
| TGTGATTCAGTGATGTGAAT+TGG | - | chr3_3:88427632-88427651 | Msa0481990:intron | 35.0% | |
| CAATCTATCAAATCTCCATC+TGG | + | chr3_3:88427683-88427702 | None:intergenic | 35.0% | |
| ACTCAAAGGACAAAAACCAT+TGG | - | chr3_3:88427742-88427761 | Msa0481990:intron | 35.0% | |
| !! | CCATTGTTGTTATACCCTTT+TGG | + | chr3_3:88427907-88427926 | None:intergenic | 35.0% |
| ! | CCAAAAGGGTATAACAACAA+TGG | - | chr3_3:88427904-88427923 | Msa0481990:intron | 35.0% |
| !! | TTTCAGCTTTGGATTGATTC+TGG | - | chr3_3:88427946-88427965 | Msa0481990:intron | 35.0% |
| TGTTCTGTTGTTCTTCTGAT+TGG | + | chr3_3:88427997-88428016 | None:intergenic | 35.0% | |
| GCAAGCTCTATAAGAAGATT+TGG | - | chr3_3:88428030-88428049 | Msa0481990:intron | 35.0% | |
| AGATTTGGAAGAAAACCAAG+AGG | - | chr3_3:88428045-88428064 | Msa0481990:intron | 35.0% | |
| !! | CACTTTTTGATGCAAATAGG+AGG | + | chr3_3:88428246-88428265 | None:intergenic | 35.0% |
| CAAAAGCAAGCATAAATGTG+TGG | - | chr3_3:88428412-88428431 | Msa0481990:intron | 35.0% | |
| TCATATTGATCAGTTACCCT+TGG | + | chr3_3:88428441-88428460 | None:intergenic | 35.0% | |
| ! | TCACAAATATGGGTTATTGC+TGG | - | chr3_3:88428471-88428490 | Msa0481990:intron | 35.0% |
| GTCCAATAAGTGAAGAATCT+AGG | + | chr3_3:88428680-88428699 | None:intergenic | 35.0% | |
| TCCATTATAGAACGATCTTG+GGG | + | chr3_3:88428890-88428909 | None:intergenic | 35.0% | |
| CTTCCATTATAGAACGATCT+TGG | + | chr3_3:88428892-88428911 | None:intergenic | 35.0% | |
| ATTCTCCACAGTGTCAATTT+AGG | + | chr3_3:88429028-88429047 | None:intergenic | 35.0% | |
| GAATTAAACCTAAGACCTTG+AGG | - | chr3_3:88429044-88429063 | Msa0481990:intron | 35.0% | |
| TTATACCAATCTACTTGGGT+TGG | + | chr3_3:88429108-88429127 | None:intergenic | 35.0% | |
| !! | GTTTAAGTTGTTATGTCTGG+TGG | + | chr3_3:88429149-88429168 | None:intergenic | 35.0% |
| !! | GGTGTTTAAGTTGTTATGTC+TGG | + | chr3_3:88429152-88429171 | None:intergenic | 35.0% |
| TATCAATTTCGTGCCAATGT+CGG | - | chr3_3:88429203-88429222 | Msa0481990:intron | 35.0% | |
| GACACAAAAGCCTAATACTT+TGG | - | chr3_3:88429284-88429303 | Msa0481990:intron | 35.0% | |
| ! | AAAGCCTAATACTTTGGGTT+TGG | - | chr3_3:88429290-88429309 | Msa0481990:intron | 35.0% |
| TATTCAAATGGAAGATTCCC+TGG | - | chr3_3:88429504-88429523 | Msa0481990:intron | 35.0% | |
| !!! | TAGGCTTTTGAAACCAGTTA+CGG | + | chr3_3:88429641-88429660 | None:intergenic | 35.0% |
| ATGCCAACATCAGAAGATTA+GGG | + | chr3_3:88429803-88429822 | None:intergenic | 35.0% | |
| ACTAAAGTCTTAGGGTGATT+TGG | + | chr3_3:88429930-88429949 | None:intergenic | 35.0% | |
| ACTAACGAAGTCTACATTCA+GGG | - | chr3_3:88430276-88430295 | Msa0481990:intron | 35.0% | |
| TCAGGGACTAAATTGACTAA+CGG | - | chr3_3:88430293-88430312 | Msa0481990:intron | 35.0% | |
| TCAGGGACTAAATTGACTAA+CGG | - | chr3_3:88430293-88430312 | Msa0481990:intron | 35.0% | |
| GACTAACAAAGTCTACATTC+AGG | - | chr3_3:88430371-88430390 | Msa0481990:intron | 35.0% | |
| TATGTATAGGACCCAAAACA+TGG | - | chr3_3:88430500-88430519 | Msa0481990:intron | 35.0% | |
| AAGTGACTAAACAAGTTTGC+TGG | + | chr3_3:88430572-88430591 | None:intergenic | 35.0% | |
| ATTGTGAATTCACGTTCAAG+GGG | - | chr3_3:88430629-88430648 | Msa0481990:intron | 35.0% | |
| GAGGGAAGAAATAATGTTTG+GGG | - | chr3_3:88430815-88430834 | Msa0481990:intron | 35.0% | |
| ! | TTGAGAAGTACATAGTCAGT+AGG | + | chr3_3:88431123-88431142 | None:intergenic | 35.0% |
| GAAGGTTTCATCGAAATCCA+TGG | - | chr3_3:88422031-88422050 | Msa0481990:three_prime_UTR | 40.0% | |
| GTCAATGTACTGTGTACTGA+CGG | + | chr3_3:88422528-88422547 | None:intergenic | 40.0% | |
| AGTGCATAGTGTCTGATAAC+AGG | - | chr3_3:88422881-88422900 | Msa0481990:intron | 40.0% | |
| CGATATTGGTAAGAACACGA+TGG | - | chr3_3:88422955-88422974 | Msa0481990:intron | 40.0% | |
| GTCGTCGAATGATTTACGAT+TGG | - | chr3_3:88423157-88423176 | Msa0481990:intron | 40.0% | |
| !! | TGATTTACGATTGGGTTGAC+GGG | - | chr3_3:88423166-88423185 | Msa0481990:intron | 40.0% |
| AATGTACGTGTCATGTGTGT+TGG | - | chr3_3:88423222-88423241 | Msa0481990:intron | 40.0% | |
| GTATATTTGGAAGCAGTGCA+GGG | + | chr3_3:88423640-88423659 | None:intergenic | 40.0% | |
| TGAGATGGTGTGAGGAATTA+GGG | + | chr3_3:88423937-88423956 | None:intergenic | 40.0% | |
| ATAGAGGGAGAGAGTGATAA+GGG | + | chr3_3:88423968-88423987 | None:intergenic | 40.0% | |
| AATAGAGGGAGAGAGTGATA+AGG | + | chr3_3:88423969-88423988 | None:intergenic | 40.0% | |
| ! | AAAGGTGATCAATTTTCGCC+GGG | - | chr3_3:88424032-88424051 | Msa0481990:intron | 40.0% |
| AAAATAGTGAGTAGCCGACT+TGG | - | chr3_3:88424057-88424076 | Msa0481990:intron | 40.0% | |
| ! | AAATAGTGAGTAGCCGACTT+GGG | - | chr3_3:88424058-88424077 | Msa0481990:intron | 40.0% |
| ! | CACGAAGTTCTTTTTACCCA+CGG | + | chr3_3:88424143-88424162 | None:intergenic | 40.0% |
| TGGGTAAAAAGAACTTCGTG+TGG | - | chr3_3:88424143-88424162 | Msa0481990:intron | 40.0% | |
| AAATAGTGAGCAGCCTTCTT+GGG | + | chr3_3:88424218-88424237 | None:intergenic | 40.0% | |
| AAAATAGTGAGCAGCCTTCT+TGG | + | chr3_3:88424219-88424238 | None:intergenic | 40.0% | |
| !!! | GTTCACTTTTTACCCCAAGA+AGG | - | chr3_3:88424253-88424272 | Msa0481990:intron | 40.0% |
| ! | TAAACGTGTTGTTGTGGTAG+AGG | - | chr3_3:88424859-88424878 | Msa0481990:intron | 40.0% |
| CGTAGTATATGACCCGATAA+TGG | + | chr3_3:88425422-88425441 | None:intergenic | 40.0% | |
| ATCCTCAAAACAGTGAAAGG+AGG | - | chr3_3:88425510-88425529 | Msa0481990:CDS | 40.0% | |
| TCAAAACAGTGAAAGGAGGA+GGG | - | chr3_3:88425514-88425533 | Msa0481990:CDS | 40.0% | |
| ! | TTTGGTGCATATTACAGTGG+AGG | - | chr3_3:88425833-88425852 | Msa0481990:intron | 40.0% |
| GGGAGAGCCACATAATAATT+AGG | - | chr3_3:88425956-88425975 | Msa0481990:intron | 40.0% | |
| !! | TTAGGAGTATTCCGTAGCAT+TGG | - | chr3_3:88425974-88425993 | Msa0481990:intron | 40.0% |
| ! | TATTCCGTAGCATTGGAACA+AGG | - | chr3_3:88425981-88426000 | Msa0481990:intron | 40.0% |
| ! | GTAGCATTGGAACAAGGTAT+AGG | - | chr3_3:88425987-88426006 | Msa0481990:intron | 40.0% |
| ! | CCTTAAGACACTTGTTAGCA+AGG | + | chr3_3:88426266-88426285 | None:intergenic | 40.0% |
| CCTTGCTAACAAGTGTCTTA+AGG | - | chr3_3:88426263-88426282 | Msa0481990:intron | 40.0% | |
| GGGTGCTAAAAGATCCAATT+TGG | + | chr3_3:88426630-88426649 | None:intergenic | 40.0% | |
| ACCCTTATCGAAGAATGAAG+AGG | - | chr3_3:88426646-88426665 | Msa0481990:intron | 40.0% | |
| CCCTCTTCATTCTTCGATAA+GGG | + | chr3_3:88426650-88426669 | None:intergenic | 40.0% | |
| CCCTTATCGAAGAATGAAGA+GGG | - | chr3_3:88426647-88426666 | Msa0481990:intron | 40.0% | |
| ACCCTCTTCATTCTTCGATA+AGG | + | chr3_3:88426651-88426670 | None:intergenic | 40.0% | |
| AGATACTTCTCACAACCCTT+TGG | - | chr3_3:88426874-88426893 | Msa0481990:intron | 40.0% | |
| GGGAGAGAGAGAGAATATAA+TGG | + | chr3_3:88427011-88427030 | None:intergenic | 40.0% | |
| TGAGGACCAGTTAGAAAAGA+AGG | - | chr3_3:88427040-88427059 | Msa0481990:intron | 40.0% | |
| GAGGACCAGTTAGAAAAGAA+GGG | - | chr3_3:88427041-88427060 | Msa0481990:intron | 40.0% | |
| AACTTGGTAGGCTTTCTTCT+TGG | - | chr3_3:88427084-88427103 | Msa0481990:intron | 40.0% | |
| TTTGACCATCCACTACTCAA+AGG | - | chr3_3:88427728-88427747 | Msa0481990:intron | 40.0% | |
| ! | TTTGTCCTTTGAGTAGTGGA+TGG | + | chr3_3:88427736-88427755 | None:intergenic | 40.0% |
| ! | GGTTTTTGTCCTTTGAGTAG+TGG | + | chr3_3:88427740-88427759 | None:intergenic | 40.0% |
| GTAAGAGGCTTAAGGTTTAC+AGG | - | chr3_3:88427867-88427886 | Msa0481990:intron | 40.0% | |
| !! | TTATACCCTTTTGGCCTTTC+TGG | + | chr3_3:88427898-88427917 | None:intergenic | 40.0% |
| TCTGGTGAAGAATGTCCTAA+AGG | - | chr3_3:88427964-88427983 | Msa0481990:intron | 40.0% | |
| CTGATTGGAACAGTTCCTTT+AGG | + | chr3_3:88427982-88428001 | None:intergenic | 40.0% | |
| ! | GAAGAAAACCAAGAGGTGTA+CGG | - | chr3_3:88428052-88428071 | Msa0481990:intron | 40.0% |
| ! | TAGGAGGCAAACTTTTGTTG+TGG | + | chr3_3:88428230-88428249 | None:intergenic | 40.0% |
| CATAAATGTGTGGACACCAA+GGG | - | chr3_3:88428422-88428441 | Msa0481990:intron | 40.0% | |
| TGGGTTATTGCTGGATCATT+TGG | - | chr3_3:88428480-88428499 | Msa0481990:intron | 40.0% | |
| CAGGTAAGCCCTGAATTATA+TGG | - | chr3_3:88428644-88428663 | Msa0481990:intron | 40.0% | |
| TCCCCAAGATCGTTCTATAA+TGG | - | chr3_3:88428886-88428905 | Msa0481990:intron | 40.0% | |
| TTAAACCTAAGACCTTGAGG+AGG | - | chr3_3:88429047-88429066 | Msa0481990:intron | 40.0% | |
| !! | TGGTCTGATGGTATTGACTT+GGG | + | chr3_3:88429088-88429107 | None:intergenic | 40.0% |
| !! | TTGGTCTGATGGTATTGACT+TGG | + | chr3_3:88429089-88429108 | None:intergenic | 40.0% |
| CACATGTCAAAATCCGACAT+TGG | + | chr3_3:88429219-88429238 | None:intergenic | 40.0% | |
| ! | CCTTCCAAACCCAAAGTATT+AGG | + | chr3_3:88429297-88429316 | None:intergenic | 40.0% |
| ! | CCTAATACTTTGGGTTTGGA+AGG | - | chr3_3:88429294-88429313 | Msa0481990:intron | 40.0% |
| TCGTACATGGAAAAAAGCCA+GGG | + | chr3_3:88429524-88429543 | None:intergenic | 40.0% | |
| !!! | AACATTGGTTTTGCCGTAAC+TGG | - | chr3_3:88429625-88429644 | Msa0481990:intron | 40.0% |
| CATGCCAACATCAGAAGATT+AGG | + | chr3_3:88429804-88429823 | None:intergenic | 40.0% | |
| ! | AAGTCTTAGGGTGATTTGGA+TGG | + | chr3_3:88429926-88429945 | None:intergenic | 40.0% |
| ! | TAGTCACTTTAGTCCCTGAA+TGG | - | chr3_3:88430172-88430191 | Msa0481990:intron | 40.0% |
| GACTAACGAAGTCTACATTC+AGG | - | chr3_3:88430275-88430294 | Msa0481990:intron | 40.0% | |
| ! | AGTCACTTTAGTCCCTGAAT+GGG | + | chr3_3:88430173-88430192 | None:intergenic | 40.0% |
| ! | TAGTCACTTTAGTCCCTGAA+TGG | + | chr3_3:88430172-88430191 | None:intergenic | 40.0% |
| CATGCAAGCATGGTACAATT+TGG | - | chr3_3:88430599-88430618 | Msa0481990:intron | 40.0% | |
| ! | ATGGGAAGTGGACATTTTTC+AGG | - | chr3_3:88430671-88430690 | Msa0481990:intron | 40.0% |
| !!! | AGTGGACATTTTTCAGGAGA+AGG | - | chr3_3:88430677-88430696 | Msa0481990:intron | 40.0% |
| TTTATTATGGAGGTCCTGGA+AGG | - | chr3_3:88430846-88430865 | Msa0481990:intron | 40.0% | |
| ATCGAAATCCATGGAGCATG+TGG | - | chr3_3:88422040-88422059 | Msa0481990:three_prime_UTR | 45.0% | |
| TGATGTCAATGGACGGTCAA+AGG | + | chr3_3:88422552-88422571 | None:intergenic | 45.0% | |
| GGTATATTTGGAAGCAGTGC+AGG | + | chr3_3:88423641-88423660 | None:intergenic | 45.0% | |
| GCGTGACTTAACTAACGCAA+GGG | + | chr3_3:88423662-88423681 | None:intergenic | 45.0% | |
| TGCGTGACTTAACTAACGCA+AGG | + | chr3_3:88423663-88423682 | None:intergenic | 45.0% | |
| ! | TGTTCTTCAGTTCTGACCAC+CGG | + | chr3_3:88423775-88423794 | None:intergenic | 45.0% |
| GTGAGATGGTGTGAGGAATT+AGG | + | chr3_3:88423938-88423957 | None:intergenic | 45.0% | |
| ATAAGGGGGAGAAAGTGAGA+TGG | + | chr3_3:88423952-88423971 | None:intergenic | 45.0% | |
| TAGAGGGAGAGAGTGATAAG+GGG | + | chr3_3:88423967-88423986 | None:intergenic | 45.0% | |
| !!! | GGCTACTCACTATTTTAGCC+CGG | + | chr3_3:88424053-88424072 | None:intergenic | 45.0% |
| !! | AATAGTGAGTAGCCGACTTG+GGG | - | chr3_3:88424059-88424078 | Msa0481990:intron | 45.0% |
| ! | ACCGCAGAAACTTTTTACCG+TGG | - | chr3_3:88424123-88424142 | Msa0481990:intron | 45.0% |
| CCCACGGTAAAAAGTTTCTG+CGG | + | chr3_3:88424127-88424146 | None:intergenic | 45.0% | |
| ! | CCGCAGAAACTTTTTACCGT+GGG | - | chr3_3:88424124-88424143 | Msa0481990:intron | 45.0% |
| AATAGTGAGCAGCCTTCTTG+GGG | + | chr3_3:88424217-88424236 | None:intergenic | 45.0% | |
| ! | AACTAGCGCATGGGCATTTT+CGG | - | chr3_3:88424722-88424741 | Msa0481990:CDS | 45.0% |
| ! | CTCCTCCTTTCACTGTTTTG+AGG | + | chr3_3:88425515-88425534 | None:intergenic | 45.0% |
| CTCAAAACAGTGAAAGGAGG+AGG | - | chr3_3:88425513-88425532 | Msa0481990:CDS | 45.0% | |
| AAGTGAAAGCAGCTATCACC+AGG | - | chr3_3:88425933-88425952 | Msa0481990:intron | 45.0% | |
| AGTGAAAGCAGCTATCACCA+GGG | - | chr3_3:88425934-88425953 | Msa0481990:intron | 45.0% | |
| TTGCACAGTGTAACGGCTAT+CGG | - | chr3_3:88426600-88426619 | Msa0481990:intron | 45.0% | |
| !! | GAAGAGGGTACTACCATTGT+TGG | - | chr3_3:88426662-88426681 | Msa0481990:intron | 45.0% |
| ACTTCTCACAACCCTTTGGA+AGG | - | chr3_3:88426878-88426897 | Msa0481990:intron | 45.0% | |
| ! | CTTCTCACAACCCTTTGGAA+GGG | - | chr3_3:88426879-88426898 | Msa0481990:intron | 45.0% |
| ACAAAATAGACCCTGTGCAC+AGG | + | chr3_3:88426939-88426958 | None:intergenic | 45.0% | |
| ! | ACAGGGTCTATTTTGTGTGC+TGG | - | chr3_3:88426943-88426962 | Msa0481990:intron | 45.0% |
| ACAACGGGGTGTGACAAAAT+TGG | + | chr3_3:88427375-88427394 | None:intergenic | 45.0% | |
| GCCTCCCATCAAGACAATTA+AGG | - | chr3_3:88427518-88427537 | Msa0481990:intron | 45.0% | |
| GCCTTAATTGTCTTGATGGG+AGG | + | chr3_3:88427522-88427541 | None:intergenic | 45.0% | |
| TTCACGAATCGAACCGACAA+TGG | - | chr3_3:88427571-88427590 | Msa0481990:intron | 45.0% | |
| CACTGAGATTCAGCCATTGT+CGG | + | chr3_3:88427587-88427606 | None:intergenic | 45.0% | |
| GCTGAATCTCAGTGACAATG+AGG | - | chr3_3:88427593-88427612 | Msa0481990:intron | 45.0% | |
| ! | CTTTTGTTGCAGAGTCCAGA+TGG | - | chr3_3:88427665-88427684 | Msa0481990:intron | 45.0% |
| !! | AGTAGTGGATGGTCAAAAGC+TGG | + | chr3_3:88427725-88427744 | None:intergenic | 45.0% |
| GTTTACAGGATCCACCAGAA+AGG | - | chr3_3:88427881-88427900 | Msa0481990:intron | 45.0% | |
| ATCCACCAGAAAGGCCAAAA+GGG | - | chr3_3:88427890-88427909 | Msa0481990:intron | 45.0% | |
| GCATAAATGTGTGGACACCA+AGG | - | chr3_3:88428421-88428440 | Msa0481990:intron | 45.0% | |
| TACATTAGAAGCAGGATGGC+AGG | - | chr3_3:88428515-88428534 | Msa0481990:intron | 45.0% | |
| ACGGATGCATATCAAGCAAC+TGG | - | chr3_3:88428796-88428815 | Msa0481990:intron | 45.0% | |
| TCCACAGTGTCAATTTAGGC+GGG | + | chr3_3:88429024-88429043 | None:intergenic | 45.0% | |
| CTCCACAGTGTCAATTTAGG+CGG | + | chr3_3:88429025-88429044 | None:intergenic | 45.0% | |
| !! | ATCTACTTGGGTTGGTCTGA+TGG | + | chr3_3:88429100-88429119 | None:intergenic | 45.0% |
| TCAGACCAACCCAAGTAGAT+TGG | - | chr3_3:88429100-88429119 | Msa0481990:intron | 45.0% | |
| CTCGTACATGGAAAAAAGCC+AGG | + | chr3_3:88429525-88429544 | None:intergenic | 45.0% | |
| GAAGATTAGGGTCCCCTTAT+GGG | + | chr3_3:88429791-88429810 | None:intergenic | 45.0% | |
| AGAAGATTAGGGTCCCCTTA+TGG | + | chr3_3:88429792-88429811 | None:intergenic | 45.0% | |
| GGACCCTAATCTTCTGATGT+TGG | - | chr3_3:88429797-88429816 | Msa0481990:intron | 45.0% | |
| GATGTTGGCATGAATCTTCG+CGG | - | chr3_3:88429812-88429831 | Msa0481990:intron | 45.0% | |
| TATGCAAAACAGTCCCTGCA+TGG | - | chr3_3:88430232-88430251 | Msa0481990:intron | 45.0% | |
| TCCCTGCATGGTCAATTTCA+GGG | - | chr3_3:88430244-88430263 | Msa0481990:intron | 45.0% | |
| TCCCTGAAATTGACCATGCA+GGG | + | chr3_3:88430248-88430267 | None:intergenic | 45.0% | |
| ACTAACGGAGTCTGCATTCA+GGG | - | chr3_3:88430308-88430327 | Msa0481990:intron | 45.0% | |
| ACTAACGGAGTCTGCATTCA+GGG | - | chr3_3:88430308-88430327 | Msa0481990:intron | 45.0% | |
| ! | GTCACTTTAGTCCCTGAATG+GGG | + | chr3_3:88430174-88430193 | None:intergenic | 45.0% |
| AGGACCCAAAACATGGACAT+TGG | - | chr3_3:88430507-88430526 | Msa0481990:intron | 45.0% | |
| ACCCAAAACATGGACATTGG+TGG | - | chr3_3:88430510-88430529 | Msa0481990:intron | 45.0% | |
| ! | GCCACCAATGTCCATGTTTT+GGG | + | chr3_3:88430514-88430533 | None:intergenic | 45.0% |
| ! | AGCCACCAATGTCCATGTTT+TGG | + | chr3_3:88430515-88430534 | None:intergenic | 45.0% |
| ! | GGACATTGGTGGCTTGAATT+TGG | - | chr3_3:88430521-88430540 | Msa0481990:intron | 45.0% |
| TGGTGGCTTGAATTTGGATC+AGG | - | chr3_3:88430527-88430546 | Msa0481990:intron | 45.0% | |
| GGTGGCTTGAATTTGGATCA+GGG | - | chr3_3:88430528-88430547 | Msa0481990:intron | 45.0% | |
| TTTGGATCAGGGCTACTAGT+TGG | - | chr3_3:88430539-88430558 | Msa0481990:intron | 45.0% | |
| CAGGGCTACTAGTTGGATAT+TGG | - | chr3_3:88430546-88430565 | Msa0481990:intron | 45.0% | |
| CTTGAGAAGTCATGCAAGCA+TGG | - | chr3_3:88430589-88430608 | Msa0481990:intron | 45.0% | |
| GCAAGCATGGTACAATTTGG+AGG | - | chr3_3:88430602-88430621 | Msa0481990:intron | 45.0% | |
| ATACCACACTGGCACACAAA+TGG | - | chr3_3:88430652-88430671 | Msa0481990:intron | 45.0% | |
| TACCACACTGGCACACAAAT+GGG | - | chr3_3:88430653-88430672 | Msa0481990:intron | 45.0% | |
| !! | ATTAATACAAATATAAATAA+AGG | + | chr3_3:88424445-88424464 | None:intergenic | 5.0% |
| !!! | AATTATTGAATTTTAAAATA+AGG | - | chr3_3:88425482-88425501 | Msa0481990:CDS | 5.0% |
| !!! | ATTATTGAATTTTAAAATAA+GGG | - | chr3_3:88425483-88425502 | Msa0481990:CDS | 5.0% |
| !!! | TTTTTTATATATAATTAAAG+TGG | - | chr3_3:88427827-88427846 | Msa0481990:intron | 5.0% |
| TCCATGGAGCATGTGGTGTT+TGG | - | chr3_3:88422047-88422066 | Msa0481990:three_prime_UTR | 50.0% | |
| TCCAAACACCACATGCTCCA+TGG | + | chr3_3:88422051-88422070 | None:intergenic | 50.0% | |
| ATGGAGCATGTGGTGTTTGG+AGG | - | chr3_3:88422050-88422069 | Msa0481990:three_prime_UTR | 50.0% | |
| TGGAGCATGTGGTGTTTGGA+GGG | - | chr3_3:88422051-88422070 | Msa0481990:three_prime_UTR | 50.0% | |
| CATATAACTGATGTGGGCCC+CGG | + | chr3_3:88422496-88422515 | None:intergenic | 50.0% | |
| GTACGTGTCATGTGTGTTGG+TGG | - | chr3_3:88423225-88423244 | Msa0481990:intron | 50.0% | |
| TGCGAGTAAAAGTTGCTGGG+TGG | + | chr3_3:88424758-88424777 | None:intergenic | 50.0% | |
| GGGTGCGAGTAAAAGTTGCT+GGG | + | chr3_3:88424755-88424774 | None:intergenic | 50.0% | |
| AGGGTGCGAGTAAAAGTTGC+TGG | + | chr3_3:88424754-88424773 | None:intergenic | 50.0% | |
| GTGACTTAAGTCACGCACGT+TGG | - | chr3_3:88423717-88423736 | Msa0481990:intron | 50.0% | |
| GGAGAAAGTGAGATGGTGTG+AGG | + | chr3_3:88423945-88423964 | None:intergenic | 50.0% | |
| AGAGGGAGAGAGTGATAAGG+GGG | + | chr3_3:88423966-88423985 | None:intergenic | 50.0% | |
| GGTCGATCATTTCCCCAAGT+CGG | + | chr3_3:88424074-88424093 | None:intergenic | 50.0% | |
| TTGGGGAAATGATCGACCCT+TGG | - | chr3_3:88424076-88424095 | Msa0481990:intron | 50.0% | |
| TGGGGAAATGATCGACCCTT+GGG | - | chr3_3:88424077-88424096 | Msa0481990:intron | 50.0% | |
| TGCGCAAGTTAACTAGCGCA+TGG | - | chr3_3:88424712-88424731 | Msa0481990:CDS | 50.0% | |
| GCGCAAGTTAACTAGCGCAT+GGG | - | chr3_3:88424713-88424732 | Msa0481990:CDS | 50.0% | |
| AGGGTGCGAGTAAAAGTTGC+TGG | - | chr3_3:88424754-88424773 | Msa0481990:CDS | 50.0% | |
| GGGTGCGAGTAAAAGTTGCT+GGG | - | chr3_3:88424755-88424774 | Msa0481990:CDS | 50.0% | |
| TGCGAGTAAAAGTTGCTGGG+TGG | - | chr3_3:88424758-88424777 | Msa0481990:CDS | 50.0% | |
| GTGAAAGCAGCTATCACCAG+GGG | - | chr3_3:88425935-88425954 | Msa0481990:intron | 50.0% | |
| TGAAAGCAGCTATCACCAGG+GGG | - | chr3_3:88425936-88425955 | Msa0481990:intron | 50.0% | |
| TTATTATGTGGCTCTCCCCC+TGG | + | chr3_3:88425954-88425973 | None:intergenic | 50.0% | |
| CGGCTATCGGTGATCCAAAT+TGG | - | chr3_3:88426613-88426632 | Msa0481990:intron | 50.0% | |
| AATAGACCCTGTGCACAGGT+GGG | + | chr3_3:88426935-88426954 | None:intergenic | 50.0% | |
| AAATAGACCCTGTGCACAGG+TGG | + | chr3_3:88426936-88426955 | None:intergenic | 50.0% | |
| ACTGGTCCTCACTAGAGAGA+GGG | + | chr3_3:88427031-88427050 | None:intergenic | 50.0% | |
| AACTGGTCCTCACTAGAGAG+AGG | + | chr3_3:88427032-88427051 | None:intergenic | 50.0% | |
| GATCCACCAGAAAGGCCAAA+AGG | - | chr3_3:88427889-88427908 | Msa0481990:intron | 50.0% | |
| !! | TACCCTTTTGGCCTTTCTGG+TGG | + | chr3_3:88427895-88427914 | None:intergenic | 50.0% |
| CTCAACAGGCAATGGTCATG+AGG | - | chr3_3:88428080-88428099 | Msa0481990:intron | 50.0% | |
| CATGTACGAGTGTCCCTCAT+GGG | - | chr3_3:88429535-88429554 | Msa0481990:intron | 50.0% | |
| ATGTACGAGTGTCCCTCATG+GGG | - | chr3_3:88429536-88429555 | Msa0481990:intron | 50.0% | |
| AGAACAGAGCTACCCCATGA+GGG | + | chr3_3:88429551-88429570 | None:intergenic | 50.0% | |
| AAGAACAGAGCTACCCCATG+AGG | + | chr3_3:88429552-88429571 | None:intergenic | 50.0% | |
| GACGAATCGTTCGCCATTCA+GGG | + | chr3_3:88430188-88430207 | None:intergenic | 50.0% | |
| TGACGAATCGTTCGCCATTC+AGG | + | chr3_3:88430189-88430208 | None:intergenic | 50.0% | |
| GTCCCTGCATGGTCAATTTC+AGG | - | chr3_3:88430243-88430262 | Msa0481990:intron | 50.0% | |
| GTCCCTGAAATTGACCATGC+AGG | + | chr3_3:88430249-88430268 | None:intergenic | 50.0% | |
| GACTAACGGAGTCTGCATTC+AGG | - | chr3_3:88430307-88430326 | Msa0481990:intron | 50.0% | |
| GACTAACGGAGTCTGCATTC+AGG | - | chr3_3:88430307-88430326 | Msa0481990:intron | 50.0% | |
| TGACGAATCGTTCCCCATTC+AGG | - | chr3_3:88430431-88430450 | Msa0481990:intron | 50.0% | |
| GACGAATCGTTCCCCATTCA+GGG | - | chr3_3:88430432-88430451 | Msa0481990:intron | 50.0% | |
| TTCCCATTTGTGTGCCAGTG+TGG | + | chr3_3:88430658-88430677 | None:intergenic | 50.0% | |
| ACTGGCACACAAATGGGAAG+TGG | - | chr3_3:88430659-88430678 | Msa0481990:intron | 50.0% | |
| GGACATCTCACATTCCTTCC+AGG | + | chr3_3:88430863-88430882 | None:intergenic | 50.0% | |
| GGAGCATGTGGTGTTTGGAG+GGG | - | chr3_3:88422052-88422071 | Msa0481990:three_prime_UTR | 55.0% | |
| CTGGCTAACAACAGAGCCTC+CGG | - | chr3_3:88422474-88422493 | Msa0481990:CDS | 55.0% | |
| TGGCTAACAACAGAGCCTCC+GGG | - | chr3_3:88422475-88422494 | Msa0481990:CDS | 55.0% | |
| CTTAAGTCACGCACGTTGGC+CGG | - | chr3_3:88423753-88423772 | Msa0481990:intron | 55.0% | |
| ! | GCATTTTCGGCATGGCTGCA+GGG | - | chr3_3:88424735-88424754 | Msa0481990:CDS | 55.0% |
| ATAGACCCTGTGCACAGGTG+GGG | + | chr3_3:88426934-88426953 | None:intergenic | 55.0% | |
| CTCTCTCCCTCTCTCTAGTG+AGG | - | chr3_3:88427022-88427041 | Msa0481990:intron | 55.0% | |
| GAGTCTCTCCGTACACCTCT+TGG | + | chr3_3:88428063-88428082 | None:intergenic | 55.0% | |
| GGTGTACGGAGAGACTCAAC+AGG | - | chr3_3:88428066-88428085 | Msa0481990:intron | 55.0% | |
| CGGAGAGACTCAACAGGCAA+TGG | - | chr3_3:88428072-88428091 | Msa0481990:intron | 55.0% | |
| GCCCGCCTAAATTGACACTG+TGG | - | chr3_3:88429020-88429039 | Msa0481990:intron | 55.0% | |
| GTGCTCCTCCTCAAGGTCTT+AGG | + | chr3_3:88429055-88429074 | None:intergenic | 55.0% | |
| TGTGAGTGTGCTCCTCCTCA+AGG | + | chr3_3:88429062-88429081 | None:intergenic | 55.0% | |
| ! | TTGAGGAGGAGCACACTCAC+AGG | - | chr3_3:88429061-88429080 | Msa0481990:intron | 55.0% |
| CCATGAGGGACACTCGTACA+TGG | + | chr3_3:88429537-88429556 | None:intergenic | 55.0% | |
| CCATGTACGAGTGTCCCTCA+TGG | - | chr3_3:88429534-88429553 | Msa0481990:intron | 55.0% | |
| CGTTCAAGGGGATACCACAC+TGG | - | chr3_3:88430641-88430660 | Msa0481990:intron | 55.0% | |
| GGCTAACAACAGAGCCTCCG+GGG | - | chr3_3:88422476-88422495 | Msa0481990:CDS | 60.0% | |
| ATAACTGATGTGGGCCCCGG+AGG | + | chr3_3:88422493-88422512 | None:intergenic | 60.0% | |
| ! | GCGCATGGGCATTTTCGGCA+TGG | - | chr3_3:88424727-88424746 | Msa0481990:CDS | 60.0% |
| ! | GGCATTTTCGGCATGGCTGC+AGG | - | chr3_3:88424734-88424753 | Msa0481990:CDS | 60.0% |
| ATGCAACCCCACCTGTGCAC+AGG | - | chr3_3:88426925-88426944 | Msa0481990:intron | 60.0% | |
| TGCAACCCCACCTGTGCACA+GGG | - | chr3_3:88426926-88426945 | Msa0481990:intron | 60.0% | |
| AAGTCACGCACGTTGGCCGG+TGG | - | chr3_3:88423756-88423775 | Msa0481990:intron | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3_3 | gene | 88422008 | 88431215 | 88422008 | ID=Msa0481990;Name=Msa0481990 |
| chr3_3 | mRNA | 88422008 | 88431215 | 88422008 | ID=Msa0481990-mRNA-1;Parent=Msa0481990;Name=Msa0481990-mRNA-1;_AED=0.34;_eAED=0.34;_QI=0|0.83|0.85|0.85|1|1|7|329|369 |
| chr3_3 | exon | 88422008 | 88422714 | 88422008 | ID=Msa0481990-mRNA-1:exon:25838;Parent=Msa0481990-mRNA-1 |
| chr3_3 | exon | 88424281 | 88424427 | 88424281 | ID=Msa0481990-mRNA-1:exon:25837;Parent=Msa0481990-mRNA-1 |
| chr3_3 | exon | 88424523 | 88424576 | 88424523 | ID=Msa0481990-mRNA-1:exon:25836;Parent=Msa0481990-mRNA-1 |
| chr3_3 | exon | 88424687 | 88424851 | 88424687 | ID=Msa0481990-mRNA-1:exon:25835;Parent=Msa0481990-mRNA-1 |
| chr3_3 | exon | 88425122 | 88425334 | 88425122 | ID=Msa0481990-mRNA-1:exon:25834;Parent=Msa0481990-mRNA-1 |
| chr3_3 | exon | 88425460 | 88425546 | 88425460 | ID=Msa0481990-mRNA-1:exon:25833;Parent=Msa0481990-mRNA-1 |
| chr3_3 | exon | 88431150 | 88431215 | 88431150 | ID=Msa0481990-mRNA-1:exon:25832;Parent=Msa0481990-mRNA-1 |
| chr3_3 | CDS | 88431150 | 88431215 | 88431150 | ID=Msa0481990-mRNA-1:cds;Parent=Msa0481990-mRNA-1 |
| chr3_3 | CDS | 88425460 | 88425546 | 88425460 | ID=Msa0481990-mRNA-1:cds;Parent=Msa0481990-mRNA-1 |
| chr3_3 | CDS | 88425122 | 88425334 | 88425122 | ID=Msa0481990-mRNA-1:cds;Parent=Msa0481990-mRNA-1 |
| chr3_3 | CDS | 88424687 | 88424851 | 88424687 | ID=Msa0481990-mRNA-1:cds;Parent=Msa0481990-mRNA-1 |
| chr3_3 | CDS | 88424523 | 88424576 | 88424523 | ID=Msa0481990-mRNA-1:cds;Parent=Msa0481990-mRNA-1 |
| chr3_3 | CDS | 88424281 | 88424427 | 88424281 | ID=Msa0481990-mRNA-1:cds;Parent=Msa0481990-mRNA-1 |
| chr3_3 | CDS | 88422337 | 88422714 | 88422337 | ID=Msa0481990-mRNA-1:cds;Parent=Msa0481990-mRNA-1 |
| chr3_3 | three_prime_UTR | 88422008 | 88422336 | 88422008 | ID=Msa0481990-mRNA-1:three_prime_utr;Parent=Msa0481990-mRNA-1 |
| Gene Sequence |
| Protein sequence |
