AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1348090


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1348090 MtrunA17_Chr8g0386571 91.416 1095 32 5 1 1093 1 1035 0.0 1982
Msa1348090 MtrunA17_Chr5g0397721 63.082 1116 335 11 1 1093 1 1062 0.0 1268
Msa1348090 MtrunA17_Chr1g0203361 38.170 765 396 11 1 756 1 697 1.47e-141 447
Msa1348090 MtrunA17_Chr1g0203361 70.909 55 16 0 1038 1092 798 852 9.62e-16 82.4
Msa1348090 MtrunA17_Chr1g0179821 25.738 474 288 15 1 447 1 437 5.87e-25 112
Msa1348090 MtrunA17_Chr1g0197491 23.293 498 319 15 5 470 30 496 3.10e-16 84.3
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1348090 AT1G63300.1 45.633 1122 488 22 1 1093 1 1029 0.0 799
Msa1348090 AT5G41140.2 44.868 1101 472 21 1 1092 1 975 0.0 782
Msa1348090 AT5G41140.1 45.322 1101 474 22 1 1092 1 982 0.0 781
Msa1348090 AT5G52280.1 36.585 902 436 19 1 892 1 776 9.01e-139 440
Msa1348090 AT5G52280.1 30.790 367 189 17 776 1092 501 852 2.26e-13 75.1
Msa1348090 AT1G22060.2 26.456 979 544 34 3 919 6 870 1.48e-46 183
Msa1348090 AT1G22060.2 52.542 59 28 0 1035 1093 1927 1985 3.60e-11 68.6
Msa1348090 AT1G22060.1 26.456 979 544 34 3 919 6 870 1.48e-46 183
Msa1348090 AT1G22060.1 52.542 59 28 0 1035 1093 1927 1985 3.60e-11 68.6

Find 212 sgRNAs with CRISPR-Local

Find 316 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GTCCTCCAGTTCCTCAATTT+TGG 0.100815 tig0010194:+67068 None:intergenic
TTTAGTCTGTTTGTAATTAT+TGG 0.149429 tig0010194:+68781 None:intergenic
AGCATCGGCTTCTTCATATT+TGG 0.200944 tig0010194:-67112 Msa1348090:CDS
TCTCAGATCTGTCATTTCTT+TGG 0.222739 tig0010194:+67392 None:intergenic
CATCAATAAGAGAATGTTTC+AGG 0.227998 tig0010194:+67553 None:intergenic
TTAAGAAGAAGAAGAATAAA+AGG 0.232780 tig0010194:+71036 None:intergenic
TCATGTATATCGGAAGAAAA+TGG 0.240483 tig0010194:-66521 Msa1348090:CDS
TCACTAAATTTCCCATTCTT+AGG 0.251223 tig0010194:+70440 None:intergenic
TTCATGATGGAAATTGTAAA+TGG 0.253945 tig0010194:-70502 Msa1348090:CDS
TTGGTACTCTCTATTGTTCC+TGG 0.267688 tig0010194:-70566 Msa1348090:CDS
GCAGTTTGACAGAGTTTATA+AGG 0.276460 tig0010194:-65911 Msa1348090:three_prime_UTR
GCAATCTGGTGTGGATTCTT+TGG 0.281309 tig0010194:-70585 Msa1348090:CDS
TTATCAAAAGCTAGTATCTT+TGG 0.299529 tig0010194:-70287 Msa1348090:CDS
TCTATTGTTCCTGGAGATAA+TGG 0.306677 tig0010194:-70557 Msa1348090:CDS
GGTATTTCTGCTTCTTTCTC+TGG 0.307986 tig0010194:+66306 None:intergenic
TGAACTAGTTCTTGCTGTTC+AGG 0.309083 tig0010194:-68852 Msa1348090:CDS
CCATCTTATATGCAAATTCA+TGG 0.311512 tig0010194:+68531 None:intergenic
TACAAGAAAATAGTGATAAA+AGG 0.318196 tig0010194:-69999 Msa1348090:intron
GGTCACTTGATGAGCTAAAT+AGG 0.319780 tig0010194:-67659 Msa1348090:CDS
CAAGGCTGAAGTTGCTGCTT+TGG 0.329744 tig0010194:-69188 Msa1348090:CDS
TGAAGCTGTTAAGTTTAATC+AGG 0.338510 tig0010194:-70465 Msa1348090:CDS
CCTCCTCTAACTTGCGGATC+TGG 0.350616 tig0010194:+68348 None:intergenic
TTGCCATTACTATCCATTAC+TGG 0.360182 tig0010194:+66285 None:intergenic
ATCAGAGATCATCACATTTC+CGG 0.360321 tig0010194:-69327 Msa1348090:CDS
GCTATGATAACTCTCTAATA+TGG 0.362852 tig0010194:+65932 None:intergenic
TGCTCAGCTGGTTCAGAACT+TGG 0.368716 tig0010194:-69301 Msa1348090:CDS
TTCTTCTTAAACTTAAACTT+TGG 0.368801 tig0010194:-71023 Msa1348090:five_prime_UTR
CTTGATACTCCCCGAGAACT+TGG 0.369394 tig0010194:-69463 Msa1348090:CDS
TCAGAGATCATCACATTTCC+GGG 0.373245 tig0010194:-69326 Msa1348090:CDS
CCGCAAGTTAGAGGAGGAAC+TGG 0.375739 tig0010194:-68342 Msa1348090:CDS
CAATGATACTTCATGTATAT+CGG 0.381401 tig0010194:-66531 Msa1348090:CDS
TTCAGAACTTGGTCTGAGTA+TGG 0.384315 tig0010194:-69290 Msa1348090:CDS
CATGTATATCGGAAGAAAAT+GGG 0.384436 tig0010194:-66520 Msa1348090:CDS
AACTTAACAGCTTCATAAAC+AGG 0.386417 tig0010194:+70473 None:intergenic
TCAATCCAAAATTGAGGAAC+TGG 0.391550 tig0010194:-67073 Msa1348090:CDS
TATATCTCCAGTGCTTAAAT+AGG 0.392273 tig0010194:+69805 None:intergenic
AAATTATCACCAGATCTTAC+TGG 0.395449 tig0010194:+65839 None:intergenic
AACTCAATGATAGGAGCTTA+AGG 0.401210 tig0010194:-69829 Msa1348090:CDS
AGACGATGAACAGAAAGAAT+TGG 0.403642 tig0010194:-68717 Msa1348090:CDS
GCTTTCTCTAATCTTGTAGT+TGG 0.404902 tig0010194:+70530 None:intergenic
CTAAGTCAGCTTCAAATCCT+TGG 0.409289 tig0010194:+68309 None:intergenic
GAACCAGATCCGCAAGTTAG+AGG 0.409504 tig0010194:-68351 Msa1348090:CDS
CTTCATTCTTCCACATTCTA+CGG 0.410307 tig0010194:-70987 Msa1348090:five_prime_UTR
CTCTACATCCGCTGCCTGAT+GGG 0.410650 tig0010194:+69222 None:intergenic
CTCAAGTAAGTGTGTCTCCT+TGG 0.410803 tig0010194:+68667 None:intergenic
TATTTCTTAGTCCAAGTTCT+CGG 0.414133 tig0010194:+69452 None:intergenic
CTCAAATTTGCAGAGGTAGA+AGG 0.414746 tig0010194:-66156 Msa1348090:CDS
ATTTCTTAGTCCAAGTTCTC+GGG 0.415269 tig0010194:+69453 None:intergenic
GGTACCCTTGCGATGGGCTT+AGG 0.416438 tig0010194:+65953 None:intergenic
TCTTCAGTTCATCGTTAAGA+TGG 0.416884 tig0010194:+67493 None:intergenic
TCAGATGCAACAGATGTTGT+TGG 0.420026 tig0010194:-67964 Msa1348090:CDS
CTGAAGTTGCTGCTTTGGCC+AGG 0.421147 tig0010194:-69183 Msa1348090:CDS
TGAAACACATATCCAGAATC+TGG 0.422058 tig0010194:-68438 Msa1348090:CDS
TACAATTGCTTTGTTGAAGA+AGG 0.422105 tig0010194:-67691 Msa1348090:CDS
CATTTCCGGGACTGCTCAGC+TGG 0.426590 tig0010194:-69313 Msa1348090:CDS
TGTGGTGAGAAAGAGCACTA+TGG 0.427495 tig0010194:+65868 None:intergenic
AGTGAGTAGCAGATCACAAT+TGG 0.427743 tig0010194:-68987 Msa1348090:CDS
TGCTTCTGTCAGCGCTCTCC+TGG 0.429455 tig0010194:+68118 None:intergenic
TTTAATCAGGATCCTAAGAA+TGG 0.430226 tig0010194:-70452 Msa1348090:CDS
TCCCATCAAGAATTCTCATT+CGG 0.430666 tig0010194:-70204 Msa1348090:CDS
AGACATTTCTCCCTAAATCA+TGG 0.435733 tig0010194:+68753 None:intergenic
AAAATCAAAGGAGACTGCTT+TGG 0.436264 tig0010194:-67136 Msa1348090:CDS
GTTTAACTAACTAACTTTGT+CGG 0.436767 tig0010194:-70864 Msa1348090:five_prime_UTR
TTAAGCACTGGAGATATAGA+TGG 0.437350 tig0010194:-69800 Msa1348090:CDS
AGAATTGGATGAGCTTGTTA+AGG 0.441376 tig0010194:-68702 Msa1348090:CDS
TAAGTCAGCTTCAAATCCTT+GGG 0.449405 tig0010194:+68310 None:intergenic
GAAGGAGCACCATTTGTTGT+AGG 0.449517 tig0010194:+69418 None:intergenic
TCAAGTTCCGATGGAAGCTC+TGG 0.453777 tig0010194:-69487 Msa1348090:CDS
TCCAGCTCTTGTGTTTGCAT+TGG 0.461122 tig0010194:+69555 None:intergenic
ACATGGAACTTCAAACTCTT+CGG 0.462481 tig0010194:-69144 Msa1348090:CDS
CTGAACCAGCTGAGCAGTCC+CGG 0.463105 tig0010194:+69308 None:intergenic
AGTTGCTGCTTTGGCCAGGC+AGG 0.463456 tig0010194:-69179 Msa1348090:CDS
CTCTCAAGATGCCCTTCCTC+GGG 0.464252 tig0010194:-69251 Msa1348090:CDS
GGATGAATTCTCAAATTCTC+TGG 0.465792 tig0010194:-68393 Msa1348090:CDS
GTCTGACACATCCACCTGCC+TGG 0.469758 tig0010194:+69165 None:intergenic
CCATGAATTTGCATATAAGA+TGG 0.474720 tig0010194:-68531 Msa1348090:CDS
GCCAATGCAAACACAAGAGC+TGG 0.476631 tig0010194:-69556 Msa1348090:CDS
TGAAACAACTTAGGATTTGA+CGG 0.482997 tig0010194:+70900 None:intergenic
TAATTTCAGGTGCTGCAATC+TGG 0.483291 tig0010194:-70599 Msa1348090:intron
TCATGATGGAAATTGTAAAT+GGG 0.485115 tig0010194:-70501 Msa1348090:CDS
AGCATCCACCCTACAACAAA+TGG 0.485951 tig0010194:-69427 Msa1348090:CDS
GCAGATGGAGCAGCTTGCAC+TGG 0.486211 tig0010194:-68579 Msa1348090:CDS
CTGGATTGAGTGCTGATTGT+AGG 0.487970 tig0010194:-69537 Msa1348090:CDS
AGAAGCAGAAATACCAGTAA+TGG 0.488162 tig0010194:-66298 Msa1348090:CDS
TCTCTACATCCGCTGCCTGA+TGG 0.489393 tig0010194:+69221 None:intergenic
TCCTCGGGAAAGTTCCCATC+AGG 0.490245 tig0010194:-69236 Msa1348090:CDS
CTTCAAAATCTTGCTGTGGA+TGG 0.491798 tig0010194:-69373 Msa1348090:CDS
GACCGGAAAATGAACTGTTC+CGG 0.492804 tig0010194:+70936 None:intergenic
ACCCTTGCGATGGGCTTAGG+AGG 0.493007 tig0010194:+65956 None:intergenic
AGCACGAGGAACAAGTTGGC+AGG 0.494013 tig0010194:-67902 Msa1348090:CDS
GCTCTCAAGATGCCCTTCCT+CGG 0.494210 tig0010194:-69252 Msa1348090:CDS
TTGAAGCTCTGAAGAGTGGC+TGG 0.496987 tig0010194:+69390 None:intergenic
TGCTGCTTTGGCCAGGCAGG+TGG 0.498919 tig0010194:-69176 Msa1348090:CDS
TTCGTTTGCGAAAAGATTTG+AGG 0.499440 tig0010194:+69023 None:intergenic
ATCATTCAACACTGGATCAC+CGG 0.501010 tig0010194:-70955 Msa1348090:five_prime_UTR
AGAAATCTTAAGTTCTGACT+TGG 0.501338 tig0010194:-67790 Msa1348090:CDS
GGAGACTGCTTTGGAAGCAT+CGG 0.501587 tig0010194:-67127 Msa1348090:CDS
TATGAATGCTCTTCTCCTCC+TGG 0.502344 tig0010194:-68473 Msa1348090:CDS
ATCGGAAGAAAATGGGGTTG+TGG 0.503083 tig0010194:-66513 Msa1348090:CDS
CAAAGCTTCCTCAGCTCGAA+TGG 0.504131 tig0010194:+68247 None:intergenic
ATCAGTCAAAGCCGATTATG+AGG 0.504634 tig0010194:-68030 Msa1348090:CDS
ATCCGAATGAGAATTCTTGA+TGG 0.505562 tig0010194:+70202 None:intergenic
AACTGATTCTGAAACAACTT+AGG 0.505841 tig0010194:+70891 None:intergenic
TAACATTTGCAGAGAGGAGG+AGG 0.507929 tig0010194:-69873 Msa1348090:intron
TAAGAAGCCTCAAGAATGCT+AGG 0.509109 tig0010194:-66107 Msa1348090:CDS
AAATCAACTCAAGAAACAAT+CGG 0.509218 tig0010194:-68414 Msa1348090:CDS
GATGGGCTTAGGAGGGGAAA+AGG 0.516795 tig0010194:+65964 None:intergenic
ATGGTGAGATAGAGATGTAT+AGG 0.523635 tig0010194:-68625 Msa1348090:CDS
AGCCCTTCCTAGCATTCTTG+AGG 0.524438 tig0010194:+66100 None:intergenic
ATCGTAAAGGAAAGCAAAAG+AGG 0.525734 tig0010194:-69115 Msa1348090:CDS
GGCTTCTTCATATTTGGAGA+AGG 0.526343 tig0010194:-67106 Msa1348090:CDS
AAGCCTCAAGAATGCTAGGA+AGG 0.527879 tig0010194:-66103 Msa1348090:CDS
AGTATGGACGGTTCAATACA+TGG 0.528292 tig0010194:-69274 Msa1348090:CDS
GGCTTCAAGAAGAATTCAAA+AGG 0.530246 tig0010194:-68187 Msa1348090:CDS
TTAATCAGGATCCTAAGAAT+GGG 0.531828 tig0010194:-70451 Msa1348090:CDS
AAGGAGCACCATTTGTTGTA+GGG 0.532047 tig0010194:+69419 None:intergenic
CTAATATGGTACCCTTGCGA+TGG 0.532894 tig0010194:+65946 None:intergenic
TCGTGTGCAGAAGAGACTAC+TGG 0.533605 tig0010194:-68087 Msa1348090:CDS
ATGCAAATGAGACGGCTACC+AGG 0.533949 tig0010194:-68136 Msa1348090:CDS
TTAAGGACCTATTTAAGCAC+TGG 0.534125 tig0010194:-69812 Msa1348090:CDS
ATTCATTCAAAATGTTCAGA+TGG 0.538552 tig0010194:-70833 Msa1348090:exon
GACACATGACAAAGTTAAGC+AGG 0.540859 tig0010194:-68279 Msa1348090:CDS
GCAGATCACAATTGGAAGGT+GGG 0.541610 tig0010194:-68979 Msa1348090:CDS
GAAAGAAAGAGACAAATCAA+TGG 0.549242 tig0010194:-66223 Msa1348090:CDS
CAAGGATGAAGAGGAGAAAG+TGG 0.551905 tig0010194:-67625 Msa1348090:CDS
CCCCTCCTAAGCCCATCGCA+AGG 0.551919 tig0010194:-65958 Msa1348090:three_prime_UTR
GATGGGAACTTTCCCGAGGA+AGG 0.551943 tig0010194:+69239 None:intergenic
AAAGGAAAGCAAAAGAGGGC+AGG 0.553150 tig0010194:-69110 Msa1348090:CDS
ACAATGTTTCCAGTAAGATC+TGG 0.553306 tig0010194:-65848 Msa1348090:three_prime_UTR
GAGAAAGCTATAGTTCATGA+TGG 0.553319 tig0010194:-70515 Msa1348090:CDS
GGAAGTTATCAGCTTGAAAG+AGG 0.554330 tig0010194:-69077 Msa1348090:CDS
AGAACTTCAATCCAAAATTG+AGG 0.555244 tig0010194:-67079 Msa1348090:CDS
CCCTTGCGATGGGCTTAGGA+GGG 0.556299 tig0010194:+65957 None:intergenic
GACATTTCTCCCTAAATCAT+GGG 0.557392 tig0010194:+68754 None:intergenic
TAACGATGAACTGAAGAAGA+AGG 0.562401 tig0010194:-67487 Msa1348090:CDS
GTGCTTCAAACAGGTTGTTG+CGG 0.562680 tig0010194:-66615 Msa1348090:intron
TCTTCGGAAACAAATCGTAA+AGG 0.563402 tig0010194:-69128 Msa1348090:CDS
TTGTGGTGTCATCAGTCAAG+AGG 0.564972 tig0010194:-66496 Msa1348090:intron
AATTAACATTTGCAGAGAGG+AGG 0.568188 tig0010194:-69876 Msa1348090:intron
AATGCAGGTCTCAAGATGAC+AGG 0.568544 tig0010194:+66066 None:intergenic
GTGGTGAGAAAGAGCACTAT+GGG 0.568619 tig0010194:+65869 None:intergenic
GACAGAGAGAGACAGACAAG+AGG 0.569282 tig0010194:-71111 Msa1348090:five_prime_UTR
AGATGAGTTAGAGATGCAGA+TGG 0.572394 tig0010194:-68594 Msa1348090:CDS
GCTGATTGTAGGACATCTAG+TGG 0.573852 tig0010194:-69526 Msa1348090:CDS
CTTATGCAACTATACAATGC+AGG 0.578036 tig0010194:+66051 None:intergenic
AGCCTCAAGAATGCTAGGAA+GGG 0.578599 tig0010194:-66102 Msa1348090:CDS
CTCATTTGCATCAAATGTAG+TGG 0.579737 tig0010194:+68148 None:intergenic
GGAAAGTTCCCATCAGGCAG+CGG 0.580002 tig0010194:-69230 Msa1348090:CDS
GTTTCAAAGTCATTTATACC+AGG 0.583051 tig0010194:+68455 None:intergenic
ATGGGAACTTTCCCGAGGAA+GGG 0.586539 tig0010194:+69240 None:intergenic
CAAAAGGCTATCAATGCAGA+TGG 0.586827 tig0010194:-68171 Msa1348090:CDS
GATGCATCTCAAGGATGAAG+AGG 0.587248 tig0010194:-67634 Msa1348090:CDS
ACATTTACATCATTCAACAC+TGG 0.590005 tig0010194:-70963 Msa1348090:five_prime_UTR
GAGCACCATTTGTTGTAGGG+TGG 0.591831 tig0010194:+69422 None:intergenic
ATACCAGTAATGGATAGTAA+TGG 0.592797 tig0010194:-66288 Msa1348090:CDS
TGAGGAACTGGAGGACAAAG+TGG 0.595036 tig0010194:-67061 Msa1348090:CDS
CATTCAAAATGTTCAGATGG+AGG 0.595398 tig0010194:-70830 Msa1348090:exon
CTGGTTCTCAAGAGACTCGA+TGG 0.595679 tig0010194:+68367 None:intergenic
CCAGTTCCTCCTCTAACTTG+CGG 0.595754 tig0010194:+68342 None:intergenic
GCAAAGAGCCATTCGAGCTG+AGG 0.597598 tig0010194:-68255 Msa1348090:CDS
AGCAGATCACAATTGGAAGG+TGG 0.598653 tig0010194:-68980 Msa1348090:CDS
TCCGAATGAGAATTCTTGAT+GGG 0.599669 tig0010194:+70203 None:intergenic
TAATATGGTACCCTTGCGAT+GGG 0.600673 tig0010194:+65947 None:intergenic
GAAGAGTGGCTGGTGACTGA+AGG 0.602498 tig0010194:+69400 None:intergenic
AGAGCTTCAAAATCTTGCTG+TGG 0.602851 tig0010194:-69377 Msa1348090:CDS
ATCCAAAATTGAGGAACTGG+AGG 0.603562 tig0010194:-67070 Msa1348090:CDS
CCCTCCTAAGCCCATCGCAA+GGG 0.603962 tig0010194:-65957 Msa1348090:three_prime_UTR
ATATGCGCTGCTGTGTAGCA+CGG 0.604766 tig0010194:+71079 None:intergenic
ATTACAATGTCAAGTTCCGA+TGG 0.606268 tig0010194:-69496 Msa1348090:CDS
CCTTGCGATGGGCTTAGGAG+GGG 0.609611 tig0010194:+65958 None:intergenic
AAATAGGATGATGCATCTCA+AGG 0.610535 tig0010194:-67643 Msa1348090:CDS
ACAGGACCTGATAAAATCAA+AGG 0.611635 tig0010194:-67148 Msa1348090:intron
CTGTTGCATCTGAACTGTCA+TGG 0.612030 tig0010194:+67974 None:intergenic
TACATTTGATGCAAATGAGA+CGG 0.612659 tig0010194:-68144 Msa1348090:CDS
GCACGAGGAACAAGTTGGCA+GGG 0.612830 tig0010194:-67901 Msa1348090:CDS
TCAGAGCATTGCTTTGCCAA+AGG 0.613432 tig0010194:-67028 Msa1348090:intron
CAGATCACAATTGGAAGGTG+GGG 0.613615 tig0010194:-68978 Msa1348090:CDS
TCAGGTGCTGCAATCTGGTG+TGG 0.614625 tig0010194:-70594 Msa1348090:intron
GAACTTGGTCTGAGTATGGA+CGG 0.616193 tig0010194:-69286 Msa1348090:CDS
GCAGGTGGATGTGTCAGACA+TGG 0.623993 tig0010194:-69161 Msa1348090:CDS
TCAAAGTCATTTATACCAGG+AGG 0.624378 tig0010194:+68458 None:intergenic
ATCAAGTCCAGAGCTTCCAT+CGG 0.625295 tig0010194:+69480 None:intergenic
ACTTATGAAGAAATCACTTG+AGG 0.632005 tig0010194:-67766 Msa1348090:CDS
TTTCCATCTCACTCTCACTC+AGG 0.635068 tig0010194:-70769 Msa1348090:intron
GTAATGGATAGTAATGGCAA+TGG 0.635117 tig0010194:-66282 Msa1348090:CDS
ACAAGAATTGAATCACGAGA+AGG 0.636953 tig0010194:-68927 Msa1348090:CDS
GTACCTGAGTGAGAGTGAGA+TGG 0.637352 tig0010194:+70766 None:intergenic
AGTAGCAGATCACAATTGGA+AGG 0.637940 tig0010194:-68983 Msa1348090:CDS
TCGTAAAGGAAAGCAAAAGA+GGG 0.638358 tig0010194:-69114 Msa1348090:CDS
TTTCTTAGTCCAAGTTCTCG+GGG 0.640293 tig0010194:+69454 None:intergenic
ATGTATATCGGAAGAAAATG+GGG 0.640455 tig0010194:-66519 Msa1348090:CDS
AAGAGGGCAGGAGCTCGCAA+AGG 0.640963 tig0010194:-69098 Msa1348090:CDS
ATTCAGTTAAAACGTTGCTG+AGG 0.645034 tig0010194:+66256 None:intergenic
TAAGGATCAAAGCAGTGCCA+AGG 0.648474 tig0010194:-68684 Msa1348090:CDS
CCAGATCCGCAAGTTAGAGG+AGG 0.652701 tig0010194:-68348 Msa1348090:CDS
ATTACAGTTAAATAAGACAC+AGG 0.657648 tig0010194:-68885 Msa1348090:CDS
AATGAGTCTCAAATTTGCAG+AGG 0.664150 tig0010194:-66163 Msa1348090:CDS
TGTTGAAGAAGGAAGCAGAA+CGG 0.665549 tig0010194:-67680 Msa1348090:CDS
CAGGTCTCAAGATGACAGGA+AGG 0.669022 tig0010194:+66070 None:intergenic
AGATCTTACTGGAAACATTG+TGG 0.671584 tig0010194:+65850 None:intergenic
GCCTGATGGGAACTTTCCCG+AGG 0.673014 tig0010194:+69235 None:intergenic
AAGGATGAAGAGGAGAAAGT+GGG 0.675953 tig0010194:-67624 Msa1348090:CDS
GAACTGGAGAAACAAGCCCA+AGG 0.679568 tig0010194:-68326 Msa1348090:CDS
TGTAAATGTTCCGTAGAATG+TGG 0.682190 tig0010194:+70977 None:intergenic
TCAAACACTAACATGCAAGA+CGG 0.686206 tig0010194:+70178 None:intergenic
GGAACTGGAGGACAAAGTGG+AGG 0.698428 tig0010194:-67058 Msa1348090:CDS
TGAGAATGAAAAGCTTACAG+TGG 0.700759 tig0010194:-67847 Msa1348090:CDS
TCTGCTCTAACATTGCATCG+AGG 0.707967 tig0010194:+68828 None:intergenic
AACAACTTAGGATTTGACGG+TGG 0.713720 tig0010194:+70903 None:intergenic
TGTGCAGAAGAGACTACTGG+AGG 0.721029 tig0010194:-68084 Msa1348090:CDS
AGTTGGCAGGGATTTCTCCG+AGG 0.728439 tig0010194:-67889 Msa1348090:CDS
AAAATGCTAATACTGCAGAG+AGG 0.734559 tig0010194:-68208 Msa1348090:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TTATTATTTTGTGATTTCAA+CGG - tig0010194:66428-66447 Msa1348090:intron 15.0%
!!! TCAAACATAATTTTAACAAT+GGG + tig0010194:67217-67236 None:intergenic 15.0%
!!! TTCAAACATAATTTTAACAA+TGG + tig0010194:67218-67237 None:intergenic 15.0%
!!! ATTTTTGTTTTTTGTTTTTG+CGG - tig0010194:71019-71038 Msa1348090:five_prime_UTR 15.0%
!! TTAAGAAGAAGAAGAATAAA+AGG + tig0010194:65806-65825 None:intergenic 20.0%
!! TTCTTCTTAAACTTAAACTT+TGG - tig0010194:65816-65835 Msa1348090:three_prime_UTR 20.0%
!!! AATGATGAACAATTTTGAAT+TGG + tig0010194:66171-66190 None:intergenic 20.0%
!! ACTAATGTTTGTATAATTTC+AGG - tig0010194:66227-66246 Msa1348090:CDS 20.0%
!! TACAAGAAAATAGTGATAAA+AGG - tig0010194:66840-66859 Msa1348090:intron 20.0%
!! TACAATAATGAATAATTCCT+TGG + tig0010194:67110-67129 None:intergenic 20.0%
!! TTTAGTCTGTTTGTAATTAT+TGG + tig0010194:68061-68080 None:intergenic 20.0%
!! TAAGACAAATTATAAATGAC+AGG + tig0010194:69966-69985 None:intergenic 20.0%
!!! TGTCATTTATAATTTGTCTT+AGG - tig0010194:69965-69984 Msa1348090:intron 20.0%
!! AAATTTATTAGTGTCACAAT+TGG + tig0010194:70446-70465 None:intergenic 20.0%
!! GTTATTGAATGGTTTATTTA+TGG - tig0010194:70476-70495 Msa1348090:CDS 20.0%
! GTTTAACTAACTAACTTTGT+CGG - tig0010194:65975-65994 Msa1348090:three_prime_UTR 25.0%
! ATTCATTCAAAATGTTCAGA+TGG - tig0010194:66006-66025 Msa1348090:three_prime_UTR 25.0%
!! TTCATGATGGAAATTGTAAA+TGG - tig0010194:66337-66356 Msa1348090:intron 25.0%
!! TCATGATGGAAATTGTAAAT+GGG - tig0010194:66338-66357 Msa1348090:intron 25.0%
!!! TCTTTTTGTTGTTGACTTTT+TGG - tig0010194:66458-66477 Msa1348090:intron 25.0%
! TTGATTGTGAATTTGTGATA+TGG - tig0010194:66503-66522 Msa1348090:CDS 25.0%
!! TTATTTGTTCTATTTTGCCT+AGG - tig0010194:66527-66546 Msa1348090:CDS 25.0%
!! TATTTGTTCTATTTTGCCTA+GGG - tig0010194:66528-66547 Msa1348090:CDS 25.0%
! TTATCAAAAGCTAGTATCTT+TGG - tig0010194:66552-66571 Msa1348090:CDS 25.0%
! CCAAAATTTCAACAATTTGA+AGG + tig0010194:66714-66733 None:intergenic 25.0%
!! CCTTCAAATTGTTGAAATTT+TGG - tig0010194:66711-66730 Msa1348090:intron 25.0%
!!! AGTTCTGATTTTTTGCTAAA+TGG - tig0010194:66797-66816 Msa1348090:intron 25.0%
!! AAATAGTGATAAAAGGTATG+TGG - tig0010194:66847-66866 Msa1348090:intron 25.0%
!! AATAGTGATAAAAGGTATGT+GGG - tig0010194:66848-66867 Msa1348090:intron 25.0%
! CAAAATCTATATCCAGAAAA+GGG + tig0010194:66896-66915 None:intergenic 25.0%
! TCAAAATCTATATCCAGAAA+AGG + tig0010194:66897-66916 None:intergenic 25.0%
! TCAATATATGTGTTGAGTAA+AGG + tig0010194:67139-67158 None:intergenic 25.0%
!! TTTTTCTTTCTAGATTTCAC+AGG - tig0010194:67252-67271 Msa1348090:intron 25.0%
! ATTACAGTTAAATAAGACAC+AGG - tig0010194:67954-67973 Msa1348090:CDS 25.0%
! AATGTTAGAGCAGAAAAATA+AGG - tig0010194:68020-68039 Msa1348090:CDS 25.0%
! AAATCAACTCAAGAAACAAT+CGG - tig0010194:68425-68444 Msa1348090:CDS 25.0%
!!! AGTATTAGCATTTTTAAGTC+TGG + tig0010194:68625-68644 None:intergenic 25.0%
!! ATTCAGTTTTACCTCATAAT+CGG + tig0010194:68823-68842 None:intergenic 25.0%
!! GATTCTTTTAAATACTCGAA+AGG - tig0010194:69103-69122 Msa1348090:CDS 25.0%
! AGAGAAAATAAAAATGCTTG+AGG - tig0010194:69469-69488 Msa1348090:CDS 25.0%
!! GGTAAATTTTCAAATCCTTT+TGG - tig0010194:69490-69509 Msa1348090:CDS 25.0%
! TTATCAAGCATATTTCTCAA+AGG + tig0010194:69531-69550 None:intergenic 25.0%
! CTAGATGAAAATATCTATAG+AGG + tig0010194:69567-69586 None:intergenic 25.0%
!!! CTTAAGTTAGTTCTATCAAA+GGG + tig0010194:69619-69638 None:intergenic 25.0%
!!! ACTTAAGTTAGTTCTATCAA+AGG + tig0010194:69620-69639 None:intergenic 25.0%
!!! GCAACGATTGATAATATTTT+TGG - tig0010194:69987-70006 Msa1348090:intron 25.0%
!!! AAGGTTTTATCATGAATTGT+TGG - tig0010194:70146-70165 Msa1348090:intron 25.0%
! GCATATTTATTGCAGATATA+TGG + tig0010194:70196-70215 None:intergenic 25.0%
! CAATGATACTTCATGTATAT+CGG - tig0010194:70308-70327 Msa1348090:intron 25.0%
ACATTTACATCATTCAACAC+TGG - tig0010194:65876-65895 Msa1348090:three_prime_UTR 30.0%
TGAAACAACTTAGGATTTGA+CGG + tig0010194:65942-65961 None:intergenic 30.0%
!! AACTGATTCTGAAACAACTT+AGG + tig0010194:65951-65970 None:intergenic 30.0%
AGAATGATGAAGAAATGTGA+AGG + tig0010194:66106-66125 None:intergenic 30.0%
AACTTAACAGCTTCATAAAC+AGG + tig0010194:66369-66388 None:intergenic 30.0%
TGAAGCTGTTAAGTTTAATC+AGG - tig0010194:66374-66393 Msa1348090:intron 30.0%
TTTAATCAGGATCCTAAGAA+TGG - tig0010194:66387-66406 Msa1348090:intron 30.0%
TTAATCAGGATCCTAAGAAT+GGG - tig0010194:66388-66407 Msa1348090:intron 30.0%
TCACTAAATTTCCCATTCTT+AGG + tig0010194:66402-66421 None:intergenic 30.0%
!!! TGATTTTTTGCTAAATGGAC+AGG - tig0010194:66802-66821 Msa1348090:intron 30.0%
! ATAGTGATAAAAGGTATGTG+GGG - tig0010194:66849-66868 Msa1348090:intron 30.0%
GGGATGATTATCTTGATTAT+TGG - tig0010194:66869-66888 Msa1348090:intron 30.0%
CATAAAAACAGTTGAGTATG+AGG + tig0010194:66925-66944 None:intergenic 30.0%
GTTAATTAACATTTGCAGAG+AGG - tig0010194:66960-66979 Msa1348090:intron 30.0%
! CCTATCATTGAGTTTTTGTT+TGG + tig0010194:67004-67023 None:intergenic 30.0%
CCAAACAAAAACTCAATGAT+AGG - tig0010194:67001-67020 Msa1348090:intron 30.0%
TATATCTCCAGTGCTTAAAT+AGG + tig0010194:67037-67056 None:intergenic 30.0%
!! AAAGTGATTCTTCTGAAGTA+AGG - tig0010194:67070-67089 Msa1348090:CDS 30.0%
TTAACAATGGGAATAGAAGA+AGG + tig0010194:67205-67224 None:intergenic 30.0%
TATTTCTTAGTCCAAGTTCT+CGG + tig0010194:67390-67409 None:intergenic 30.0%
TGTAGAGAATGAAAAACTCA+AGG - tig0010194:67633-67652 Msa1348090:CDS 30.0%
ACTAAAAACTCCCATGATTT+AGG - tig0010194:68075-68094 Msa1348090:CDS 30.0%
CTAAAAACTCCCATGATTTA+GGG - tig0010194:68076-68095 Msa1348090:CDS 30.0%
CTTACTTGAGCAAAAAATCA+CGG - tig0010194:68185-68204 Msa1348090:CDS 30.0%
!!! GGACTATGAAATTTTGAAAC+AGG - tig0010194:68281-68300 Msa1348090:CDS 30.0%
CCATCTTATATGCAAATTCA+TGG + tig0010194:68311-68330 None:intergenic 30.0%
CCATGAATTTGCATATAAGA+TGG - tig0010194:68308-68327 Msa1348090:CDS 30.0%
GTTTCAAAGTCATTTATACC+AGG + tig0010194:68387-68406 None:intergenic 30.0%
TACATTTGATGCAAATGAGA+CGG - tig0010194:68695-68714 Msa1348090:CDS 30.0%
!!! TTTCTGATTTTCAAGTTGCA+TGG + tig0010194:68916-68935 None:intergenic 30.0%
! AGAAATCTTAAGTTCTGACT+TGG - tig0010194:69049-69068 Msa1348090:CDS 30.0%
ACTTATGAAGAAATCACTTG+AGG - tig0010194:69073-69092 Msa1348090:CDS 30.0%
! TACAATTGCTTTGTTGAAGA+AGG - tig0010194:69148-69167 Msa1348090:CDS 30.0%
CATCAATAAGAGAATGTTTC+AGG + tig0010194:69289-69308 None:intergenic 30.0%
!!! AATGGTTTTAGTCTCAATGT+AGG + tig0010194:69390-69409 None:intergenic 30.0%
!!! ACTTTTTTGGTTAGTTGGAA+TGG + tig0010194:69408-69427 None:intergenic 30.0%
!!! GAAGAATTGAAGCACTTTTT+TGG + tig0010194:69421-69440 None:intergenic 30.0%
!! CAAAATGATTTGCTTATGAC+AGG - tig0010194:69673-69692 Msa1348090:intron 30.0%
AGAACTTCAATCCAAAATTG+AGG - tig0010194:69760-69779 Msa1348090:intron 30.0%
TGTACAAATTGGTATACCTT+TGG + tig0010194:69830-69849 None:intergenic 30.0%
! AGTTTTACTACTACAAGTGA+CGG - tig0010194:70252-70271 Msa1348090:CDS 30.0%
TCATGTATATCGGAAGAAAA+TGG - tig0010194:70318-70337 Msa1348090:intron 30.0%
CATGTATATCGGAAGAAAAT+GGG - tig0010194:70319-70338 Msa1348090:intron 30.0%
ATGTATATCGGAAGAAAATG+GGG - tig0010194:70320-70339 Msa1348090:intron 30.0%
TATGTGTTCTTAATGCCATA+GGG + tig0010194:70409-70428 None:intergenic 30.0%
ATATGTGTTCTTAATGCCAT+AGG + tig0010194:70410-70429 None:intergenic 30.0%
TGTGAACTGAAGTTATTGAA+TGG - tig0010194:70465-70484 Msa1348090:CDS 30.0%
!! ATACCAGTAATGGATAGTAA+TGG - tig0010194:70551-70570 Msa1348090:CDS 30.0%
GAAAGAAAGAGACAAATCAA+TGG - tig0010194:70616-70635 Msa1348090:intron 30.0%
GCTATGATAACTCTCTAATA+TGG + tig0010194:70910-70929 None:intergenic 30.0%
AAATTATCACCAGATCTTAC+TGG + tig0010194:71003-71022 None:intergenic 30.0%
CTTCATTCTTCCACATTCTA+CGG - tig0010194:65852-65871 Msa1348090:three_prime_UTR 35.0%
TGTAAATGTTCCGTAGAATG+TGG + tig0010194:65865-65884 None:intergenic 35.0%
CATTCAAAATGTTCAGATGG+AGG - tig0010194:66009-66028 Msa1348090:three_prime_UTR 35.0%
TCTATTGTTCCTGGAGATAA+TGG - tig0010194:66282-66301 Msa1348090:CDS 35.0%
GCTTTCTCTAATCTTGTAGT+TGG + tig0010194:66312-66331 None:intergenic 35.0%
GAGAAAGCTATAGTTCATGA+TGG - tig0010194:66324-66343 Msa1348090:intron 35.0%
!!! ACTAGCTTTTGATAATCCCT+AGG + tig0010194:66547-66566 None:intergenic 35.0%
TCCCATCAAGAATTCTCATT+CGG - tig0010194:66635-66654 Msa1348090:intron 35.0%
TCCGAATGAGAATTCTTGAT+GGG + tig0010194:66639-66658 None:intergenic 35.0%
ATCCGAATGAGAATTCTTGA+TGG + tig0010194:66640-66659 None:intergenic 35.0%
TCAAACACTAACATGCAAGA+CGG + tig0010194:66664-66683 None:intergenic 35.0%
! TTGATTATTGGACCCTTTTC+TGG - tig0010194:66881-66900 Msa1348090:intron 35.0%
AATTAACATTTGCAGAGAGG+AGG - tig0010194:66963-66982 Msa1348090:intron 35.0%
AACTCAATGATAGGAGCTTA+AGG - tig0010194:67010-67029 Msa1348090:intron 35.0%
TTAAGGACCTATTTAAGCAC+TGG - tig0010194:67027-67046 Msa1348090:intron 35.0%
!! TTAAGCACTGGAGATATAGA+TGG - tig0010194:67039-67058 Msa1348090:CDS 35.0%
TGAAGTAAGGTTTCACTCAT+TGG - tig0010194:67083-67102 Msa1348090:CDS 35.0%
GAAGTAAGGTTTCACTCATT+GGG - tig0010194:67084-67103 Msa1348090:CDS 35.0%
!!! GACAACTTTTGCTCTAAGAA+AGG + tig0010194:67172-67191 None:intergenic 35.0%
ATTACAATGTCAAGTTCCGA+TGG - tig0010194:67343-67362 Msa1348090:intron 35.0%
ATTTCTTAGTCCAAGTTCTC+GGG + tig0010194:67389-67408 None:intergenic 35.0%
ATCAGAGATCATCACATTTC+CGG - tig0010194:67512-67531 Msa1348090:CDS 35.0%
ACATGGAACTTCAAACTCTT+CGG - tig0010194:67695-67714 Msa1348090:CDS 35.0%
TCTTCGGAAACAAATCGTAA+AGG - tig0010194:67711-67730 Msa1348090:CDS 35.0%
ATCGTAAAGGAAAGCAAAAG+AGG - tig0010194:67724-67743 Msa1348090:CDS 35.0%
TCGTAAAGGAAAGCAAAAGA+GGG - tig0010194:67725-67744 Msa1348090:CDS 35.0%
TTCGTTTGCGAAAAGATTTG+AGG + tig0010194:67819-67838 None:intergenic 35.0%
! TCAAATCTTTTCGCAAACGA+AGG - tig0010194:67818-67837 Msa1348090:CDS 35.0%
! CAAATCTTTTCGCAAACGAA+GGG - tig0010194:67819-67838 Msa1348090:CDS 35.0%
ACAAGAATTGAATCACGAGA+AGG - tig0010194:67912-67931 Msa1348090:CDS 35.0%
GACATTTCTCCCTAAATCAT+GGG + tig0010194:68088-68107 None:intergenic 35.0%
AGACATTTCTCCCTAAATCA+TGG + tig0010194:68089-68108 None:intergenic 35.0%
AGACGATGAACAGAAAGAAT+TGG - tig0010194:68122-68141 Msa1348090:CDS 35.0%
!! AGAATTGGATGAGCTTGTTA+AGG - tig0010194:68137-68156 Msa1348090:CDS 35.0%
CAAAAAATCACGGATCTCTA+TGG - tig0010194:68195-68214 Msa1348090:CDS 35.0%
ATGGTGAGATAGAGATGTAT+AGG - tig0010194:68214-68233 Msa1348090:CDS 35.0%
TCAAAGTCATTTATACCAGG+AGG + tig0010194:68384-68403 None:intergenic 35.0%
TGAAACACATATCCAGAATC+TGG - tig0010194:68401-68420 Msa1348090:CDS 35.0%
!!! TGAGTTGATTTTCCAGATTC+TGG + tig0010194:68416-68435 None:intergenic 35.0%
GGATGAATTCTCAAATTCTC+TGG - tig0010194:68446-68465 Msa1348090:CDS 35.0%
TAAGTCAGCTTCAAATCCTT+GGG + tig0010194:68532-68551 None:intergenic 35.0%
AAAATGCTAATACTGCAGAG+AGG - tig0010194:68631-68650 Msa1348090:CDS 35.0%
GGCTTCAAGAAGAATTCAAA+AGG - tig0010194:68652-68671 Msa1348090:CDS 35.0%
CTCATTTGCATCAAATGTAG+TGG + tig0010194:68694-68713 None:intergenic 35.0%
!!! TGTCATGGCATCTTTTTTGT+TGG + tig0010194:68853-68872 None:intergenic 35.0%
! TGAAAATCAGAAAAAGCACG+AGG - tig0010194:68923-68942 Msa1348090:CDS 35.0%
! TTTTAGCAACTGAATCTCCT+CGG + tig0010194:68970-68989 None:intergenic 35.0%
TGAGAATGAAAAGCTTACAG+TGG - tig0010194:68992-69011 Msa1348090:CDS 35.0%
AAATAGGATGATGCATCTCA+AGG - tig0010194:69196-69215 Msa1348090:CDS 35.0%
TCTTCAGTTCATCGTTAAGA+TGG + tig0010194:69349-69368 None:intergenic 35.0%
TAACGATGAACTGAAGAAGA+AGG - tig0010194:69352-69371 Msa1348090:CDS 35.0%
!!! GAAGCACTTTTTTGGTTAGT+TGG + tig0010194:69413-69432 None:intergenic 35.0%
! TCTCAGATCTGTCATTTCTT+TGG + tig0010194:69450-69469 None:intergenic 35.0%
!!! TCAAATCCTTTTGGTTTGAG+CGG - tig0010194:69499-69518 Msa1348090:CDS 35.0%
ACAGGACCTGATAAAATCAA+AGG - tig0010194:69691-69710 Msa1348090:intron 35.0%
!! CAGTCTCCTTTGATTTTATC+AGG + tig0010194:69700-69719 None:intergenic 35.0%
AAAATCAAAGGAGACTGCTT+TGG - tig0010194:69703-69722 Msa1348090:intron 35.0%
TCAATCCAAAATTGAGGAAC+TGG - tig0010194:69766-69785 Msa1348090:intron 35.0%
! AAGTGTTGCGATGTACAAAT+TGG + tig0010194:69841-69860 None:intergenic 35.0%
TATCAGTCATCAATGCACTT+TGG + tig0010194:69916-69935 None:intergenic 35.0%
CTTGCTTGGTATCTTGATTA+AGG - tig0010194:70127-70146 Msa1348090:intron 35.0%
CATTGTTATGTGCTTCAAAC+AGG - tig0010194:70215-70234 Msa1348090:CDS 35.0%
ATGCCATAGGGAAGAAAAAA+GGG + tig0010194:70397-70416 None:intergenic 35.0%
AATGCCATAGGGAAGAAAAA+AGG + tig0010194:70398-70417 None:intergenic 35.0%
! TATGGATCATTTTCTGTCCA+TGG - tig0010194:70494-70513 Msa1348090:CDS 35.0%
AGAAGCAGAAATACCAGTAA+TGG - tig0010194:70541-70560 Msa1348090:CDS 35.0%
TTGCCATTACTATCCATTAC+TGG + tig0010194:70557-70576 None:intergenic 35.0%
!! GTAATGGATAGTAATGGCAA+TGG - tig0010194:70557-70576 Msa1348090:CDS 35.0%
ATTCAGTTAAAACGTTGCTG+AGG + tig0010194:70586-70605 None:intergenic 35.0%
AATGAGTCTCAAATTTGCAG+AGG - tig0010194:70676-70695 Msa1348090:intron 35.0%
CTTATGCAACTATACAATGC+AGG + tig0010194:70791-70810 None:intergenic 35.0%
GCAGTTTGACAGAGTTTATA+AGG - tig0010194:70928-70947 Msa1348090:five_prime_UTR 35.0%
AGATCTTACTGGAAACATTG+TGG + tig0010194:70992-71011 None:intergenic 35.0%
ACAATGTTTCCAGTAAGATC+TGG - tig0010194:70991-71010 Msa1348090:five_prime_UTR 35.0%
ATCATTCAACACTGGATCAC+CGG - tig0010194:65884-65903 Msa1348090:three_prime_UTR 40.0%
AACAACTTAGGATTTGACGG+TGG + tig0010194:65939-65958 None:intergenic 40.0%
! GAATTGGTCTCGAGATAAGT+TGG + tig0010194:66155-66174 None:intergenic 40.0%
! TAATTTCAGGTGCTGCAATC+TGG - tig0010194:66240-66259 Msa1348090:CDS 40.0%
TTGGTACTCTCTATTGTTCC+TGG - tig0010194:66273-66292 Msa1348090:CDS 40.0%
!!! GTTGGTTTTCCATTATCTCC+AGG + tig0010194:66294-66313 None:intergenic 40.0%
CAATGGGAATAGAAGAAGGA+TGG + tig0010194:67201-67220 None:intergenic 40.0%
TTTCTTAGTCCAAGTTCTCG+GGG + tig0010194:67388-67407 None:intergenic 40.0%
!! AAGGAGCACCATTTGTTGTA+GGG + tig0010194:67423-67442 None:intergenic 40.0%
!!! GATTTTGAAGCTCTGAAGAG+TGG + tig0010194:67456-67475 None:intergenic 40.0%
AGAGCTTCAAAATCTTGCTG+TGG - tig0010194:67462-67481 Msa1348090:CDS 40.0%
! CTTCAAAATCTTGCTGTGGA+TGG - tig0010194:67466-67485 Msa1348090:CDS 40.0%
TCAGAGATCATCACATTTCC+GGG - tig0010194:67513-67532 Msa1348090:CDS 40.0%
TTCAGAACTTGGTCTGAGTA+TGG - tig0010194:67549-67568 Msa1348090:CDS 40.0%
AGTATGGACGGTTCAATACA+TGG - tig0010194:67565-67584 Msa1348090:CDS 40.0%
GGAAGTTATCAGCTTGAAAG+AGG - tig0010194:67762-67781 Msa1348090:CDS 40.0%
AGTGAGTAGCAGATCACAAT+TGG - tig0010194:67852-67871 Msa1348090:CDS 40.0%
AGTAGCAGATCACAATTGGA+AGG - tig0010194:67856-67875 Msa1348090:CDS 40.0%
!! TGAACTAGTTCTTGCTGTTC+AGG - tig0010194:67987-68006 Msa1348090:CDS 40.0%
AGATGAGTTAGAGATGCAGA+TGG - tig0010194:68245-68264 Msa1348090:CDS 40.0%
CTAAGTCAGCTTCAAATCCT+TGG + tig0010194:68533-68552 None:intergenic 40.0%
GACACATGACAAAGTTAAGC+AGG - tig0010194:68560-68579 Msa1348090:CDS 40.0%
CAAAAGGCTATCAATGCAGA+TGG - tig0010194:68668-68687 Msa1348090:CDS 40.0%
ATCAGTCAAAGCCGATTATG+AGG - tig0010194:68809-68828 Msa1348090:CDS 40.0%
TCAGATGCAACAGATGTTGT+TGG - tig0010194:68875-68894 Msa1348090:CDS 40.0%
! AAAAAGCACGAGGAACAAGT+TGG - tig0010194:68933-68952 Msa1348090:CDS 40.0%
TGTTGAAGAAGGAAGCAGAA+CGG - tig0010194:69159-69178 Msa1348090:CDS 40.0%
GGTCACTTGATGAGCTAAAT+AGG - tig0010194:69180-69199 Msa1348090:CDS 40.0%
AAGGATGAAGAGGAGAAAGT+GGG - tig0010194:69215-69234 Msa1348090:CDS 40.0%
!! AGCATCGGCTTCTTCATATT+TGG - tig0010194:69727-69746 Msa1348090:intron 40.0%
GGCTTCTTCATATTTGGAGA+AGG - tig0010194:69733-69752 Msa1348090:intron 40.0%
ATCCAAAATTGAGGAACTGG+AGG - tig0010194:69769-69788 Msa1348090:intron 40.0%
! GGTATTTCTGCTTCTTTCTC+TGG + tig0010194:70536-70555 None:intergenic 40.0%
CTCAAATTTGCAGAGGTAGA+AGG - tig0010194:70683-70702 Msa1348090:intron 40.0%
TAAGAAGCCTCAAGAATGCT+AGG - tig0010194:70732-70751 Msa1348090:intron 40.0%
TAATATGGTACCCTTGCGAT+GGG + tig0010194:70895-70914 None:intergenic 40.0%
! CACCGGAACAGTTCATTTTC+CGG - tig0010194:65901-65920 Msa1348090:three_prime_UTR 45.0%
GACCGGAAAATGAACTGTTC+CGG + tig0010194:65906-65925 None:intergenic 45.0%
! ACAGTTCATTTTCCGGTCAC+CGG - tig0010194:65908-65927 Msa1348090:three_prime_UTR 45.0%
!! GGATTTGACGGTGGATTTTC+CGG + tig0010194:65930-65949 None:intergenic 45.0%
TTTCCATCTCACTCTCACTC+AGG - tig0010194:66070-66089 Msa1348090:three_prime_UTR 45.0%
ATCTCACTCTCACTCAGGTA+CGG - tig0010194:66075-66094 Msa1348090:three_prime_UTR 45.0%
GCAATCTGGTGTGGATTCTT+TGG - tig0010194:66254-66273 Msa1348090:CDS 45.0%
TAACATTTGCAGAGAGGAGG+AGG - tig0010194:66966-66985 Msa1348090:intron 45.0%
TCCAGCTCTTGTGTTTGCAT+TGG + tig0010194:67287-67306 None:intergenic 45.0%
!! CTGGATTGAGTGCTGATTGT+AGG - tig0010194:67302-67321 Msa1348090:intron 45.0%
GCTGATTGTAGGACATCTAG+TGG - tig0010194:67313-67332 Msa1348090:intron 45.0%
ATCAAGTCCAGAGCTTCCAT+CGG + tig0010194:67362-67381 None:intergenic 45.0%
AGCATCCACCCTACAACAAA+TGG - tig0010194:67412-67431 Msa1348090:CDS 45.0%
!! GAAGGAGCACCATTTGTTGT+AGG + tig0010194:67424-67443 None:intergenic 45.0%
GAACTTGGTCTGAGTATGGA+CGG - tig0010194:67553-67572 Msa1348090:CDS 45.0%
AAAGGAAAGCAAAAGAGGGC+AGG - tig0010194:67729-67748 Msa1348090:CDS 45.0%
! TTTTCGCAAACGAAGGGATG+AGG - tig0010194:67825-67844 Msa1348090:CDS 45.0%
AGCAGATCACAATTGGAAGG+TGG - tig0010194:67859-67878 Msa1348090:CDS 45.0%
GCAGATCACAATTGGAAGGT+GGG - tig0010194:67860-67879 Msa1348090:CDS 45.0%
CAGATCACAATTGGAAGGTG+GGG - tig0010194:67861-67880 Msa1348090:CDS 45.0%
TCTGCTCTAACATTGCATCG+AGG + tig0010194:68014-68033 None:intergenic 45.0%
TAAGGATCAAAGCAGTGCCA+AGG - tig0010194:68155-68174 Msa1348090:CDS 45.0%
CTCAAGTAAGTGTGTCTCCT+TGG + tig0010194:68175-68194 None:intergenic 45.0%
TATGAATGCTCTTCTCCTCC+TGG - tig0010194:68366-68385 Msa1348090:CDS 45.0%
CTGTTGCATCTGAACTGTCA+TGG + tig0010194:68868-68887 None:intergenic 45.0%
GATGCATCTCAAGGATGAAG+AGG - tig0010194:69205-69224 Msa1348090:CDS 45.0%
CAAGGATGAAGAGGAGAAAG+TGG - tig0010194:69214-69233 Msa1348090:CDS 45.0%
!!! TCCTTTTGGTTTGAGCGGAT+AGG - tig0010194:69504-69523 Msa1348090:CDS 45.0%
ACCTATCCGCTCAAACCAAA+AGG + tig0010194:69508-69527 None:intergenic 45.0%
GAGATCTGACAGTTGAGTGA+TGG - tig0010194:69642-69661 Msa1348090:intron 45.0%
! GTCCTCCAGTTCCTCAATTT+TGG + tig0010194:69774-69793 None:intergenic 45.0%
!! TCAGAGCATTGCTTTGCCAA+AGG - tig0010194:69811-69830 Msa1348090:CDS 45.0%
CAGTCATCAATGCACTTTGG+TGG + tig0010194:69913-69932 None:intergenic 45.0%
GTGTGTGTGTATGTCTTGCT+TGG - tig0010194:70113-70132 Msa1348090:intron 45.0%
GTGCTTCAAACAGGTTGTTG+CGG - tig0010194:70224-70243 Msa1348090:CDS 45.0%
ATCGGAAGAAAATGGGGTTG+TGG - tig0010194:70326-70345 Msa1348090:intron 45.0%
!! TTGTGGTGTCATCAGTCAAG+AGG - tig0010194:70343-70362 Msa1348090:intron 45.0%
GTGTCATCAGTCAAGAGGTT+TGG - tig0010194:70348-70367 Msa1348090:intron 45.0%
!!! ACGCCCTTTTTTCTTCCCTA+TGG - tig0010194:70391-70410 Msa1348090:intron 45.0%
AAGCCTCAAGAATGCTAGGA+AGG - tig0010194:70736-70755 Msa1348090:intron 45.0%
AGCCTCAAGAATGCTAGGAA+GGG - tig0010194:70737-70756 Msa1348090:intron 45.0%
AATGCAGGTCTCAAGATGAC+AGG + tig0010194:70776-70795 None:intergenic 45.0%
CTAATATGGTACCCTTGCGA+TGG + tig0010194:70896-70915 None:intergenic 45.0%
!! GTGGTGAGAAAGAGCACTAT+GGG + tig0010194:70973-70992 None:intergenic 45.0%
!! TGTGGTGAGAAAGAGCACTA+TGG + tig0010194:70974-70993 None:intergenic 45.0%
GACAGAGAGAGACAGACAAG+AGG - tig0010194:65728-65747 Msa1348090:three_prime_UTR 50.0%
ATATGCGCTGCTGTGTAGCA+CGG + tig0010194:65763-65782 None:intergenic 50.0%
GTACCTGAGTGAGAGTGAGA+TGG + tig0010194:66076-66095 None:intergenic 50.0%
AGGTTTCACTCATTGGGCCA+AGG - tig0010194:67090-67109 Msa1348090:CDS 50.0%
GCCAATGCAAACACAAGAGC+TGG - tig0010194:67283-67302 Msa1348090:intron 50.0%
TCAAGTTCCGATGGAAGCTC+TGG - tig0010194:67352-67371 Msa1348090:intron 50.0%
CTTGATACTCCCCGAGAACT+TGG - tig0010194:67376-67395 Msa1348090:CDS 50.0%
!! GAGCACCATTTGTTGTAGGG+TGG + tig0010194:67420-67439 None:intergenic 50.0%
!! TTGAAGCTCTGAAGAGTGGC+TGG + tig0010194:67452-67471 None:intergenic 50.0%
! TGCTCAGCTGGTTCAGAACT+TGG - tig0010194:67538-67557 Msa1348090:CDS 50.0%
ATGGGAACTTTCCCGAGGAA+GGG + tig0010194:67602-67621 None:intergenic 50.0%
! CAAGGCTGAAGTTGCTGCTT+TGG - tig0010194:67651-67670 Msa1348090:CDS 50.0%
! CTGGTTCTCAAGAGACTCGA+TGG + tig0010194:68475-68494 None:intergenic 50.0%
GAACCAGATCCGCAAGTTAG+AGG - tig0010194:68488-68507 Msa1348090:CDS 50.0%
CCAGTTCCTCCTCTAACTTG+CGG + tig0010194:68500-68519 None:intergenic 50.0%
GAACTGGAGAAACAAGCCCA+AGG - tig0010194:68513-68532 Msa1348090:CDS 50.0%
CAAAGCTTCCTCAGCTCGAA+TGG + tig0010194:68595-68614 None:intergenic 50.0%
ATGCAAATGAGACGGCTACC+AGG - tig0010194:68703-68722 Msa1348090:CDS 50.0%
TCGTGTGCAGAAGAGACTAC+TGG - tig0010194:68752-68771 Msa1348090:CDS 50.0%
TGTGCAGAAGAGACTACTGG+AGG - tig0010194:68755-68774 Msa1348090:CDS 50.0%
!! GGAGACTGCTTTGGAAGCAT+CGG - tig0010194:69712-69731 Msa1348090:intron 50.0%
TGAGGAACTGGAGGACAAAG+TGG - tig0010194:69778-69797 Msa1348090:CDS 50.0%
GCAAATGTGCATGACTGCCA+TGG + tig0010194:70514-70533 None:intergenic 50.0%
AGCCCTTCCTAGCATTCTTG+AGG + tig0010194:70742-70761 None:intergenic 50.0%
CAGGTCTCAAGATGACAGGA+AGG + tig0010194:70772-70791 None:intergenic 50.0%
!! ACGGTGGATTTTCCGGTGAC+CGG + tig0010194:65923-65942 None:intergenic 55.0%
! TCAGGTGCTGCAATCTGGTG+TGG - tig0010194:66245-66264 Msa1348090:CDS 55.0%
GAAGAGTGGCTGGTGACTGA+AGG + tig0010194:67442-67461 None:intergenic 55.0%
GCTCTCAAGATGCCCTTCCT+CGG - tig0010194:67587-67606 Msa1348090:CDS 55.0%
CTCTCAAGATGCCCTTCCTC+GGG - tig0010194:67588-67607 Msa1348090:CDS 55.0%
GATGGGAACTTTCCCGAGGA+AGG + tig0010194:67603-67622 None:intergenic 55.0%
TCCTCGGGAAAGTTCCCATC+AGG - tig0010194:67603-67622 Msa1348090:CDS 55.0%
GGAAAGTTCCCATCAGGCAG+CGG - tig0010194:67609-67628 Msa1348090:CDS 55.0%
CTCTACATCCGCTGCCTGAT+GGG + tig0010194:67620-67639 None:intergenic 55.0%
TCTCTACATCCGCTGCCTGA+TGG + tig0010194:67621-67640 None:intergenic 55.0%
!! CTGAAGTTGCTGCTTTGGCC+AGG - tig0010194:67656-67675 Msa1348090:CDS 55.0%
GCAGGTGGATGTGTCAGACA+TGG - tig0010194:67678-67697 Msa1348090:CDS 55.0%
! CCTCCTCTAACTTGCGGATC+TGG + tig0010194:68494-68513 None:intergenic 55.0%
CCAGATCCGCAAGTTAGAGG+AGG - tig0010194:68491-68510 Msa1348090:CDS 55.0%
CCGCAAGTTAGAGGAGGAAC+TGG - tig0010194:68497-68516 Msa1348090:CDS 55.0%
GCAAAGAGCCATTCGAGCTG+AGG - tig0010194:68584-68603 Msa1348090:CDS 55.0%
! AGCACGAGGAACAAGTTGGC+AGG - tig0010194:68937-68956 Msa1348090:CDS 55.0%
! GCACGAGGAACAAGTTGGCA+GGG - tig0010194:68938-68957 Msa1348090:CDS 55.0%
AGTTGGCAGGGATTTCTCCG+AGG - tig0010194:68950-68969 Msa1348090:CDS 55.0%
GGAACTGGAGGACAAAGTGG+AGG - tig0010194:69781-69800 Msa1348090:CDS 55.0%
! GATGGGCTTAGGAGGGGAAA+AGG + tig0010194:70878-70897 None:intergenic 55.0%
CATTTCCGGGACTGCTCAGC+TGG - tig0010194:67526-67545 Msa1348090:CDS 60.0%
CTGAACCAGCTGAGCAGTCC+CGG + tig0010194:67534-67553 None:intergenic 60.0%
GCCTGATGGGAACTTTCCCG+AGG + tig0010194:67607-67626 None:intergenic 60.0%
!! AGTTGCTGCTTTGGCCAGGC+AGG - tig0010194:67660-67679 Msa1348090:CDS 60.0%
GTCTGACACATCCACCTGCC+TGG + tig0010194:67677-67696 None:intergenic 60.0%
AAGAGGGCAGGAGCTCGCAA+AGG - tig0010194:67741-67760 Msa1348090:CDS 60.0%
GCAGATGGAGCAGCTTGCAC+TGG - tig0010194:68260-68279 Msa1348090:CDS 60.0%
TGCTTCTGTCAGCGCTCTCC+TGG + tig0010194:68724-68743 None:intergenic 60.0%
! CCTTGCGATGGGCTTAGGAG+GGG + tig0010194:70884-70903 None:intergenic 60.0%
! CCCTTGCGATGGGCTTAGGA+GGG + tig0010194:70885-70904 None:intergenic 60.0%
CCCTCCTAAGCCCATCGCAA+GGG - tig0010194:70882-70901 Msa1348090:five_prime_UTR 60.0%
! ACCCTTGCGATGGGCTTAGG+AGG + tig0010194:70886-70905 None:intergenic 60.0%
! GGTACCCTTGCGATGGGCTT+AGG + tig0010194:70889-70908 None:intergenic 60.0%
!! TGCTGCTTTGGCCAGGCAGG+TGG - tig0010194:67663-67682 Msa1348090:CDS 65.0%
CCCCTCCTAAGCCCATCGCA+AGG - tig0010194:70881-70900 Msa1348090:five_prime_UTR 65.0%
Chromosome Type Strat End Strand Name
tig0010194 gene 65706 71155 65706 ID=Msa1348090;Name=Msa1348090
tig0010194 mRNA 65706 71155 65706 ID=Msa1348090-mRNA-1;Parent=Msa1348090;Name=Msa1348090-mRNA-1;_AED=0.03;_eAED=0.03;_QI=311|1|1|1|1|1|9|392|1093
tig0010194 exon 65706 66341 65706 ID=Msa1348090-mRNA-1:exon:6244;Parent=Msa1348090-mRNA-1
tig0010194 exon 66497 66624 66497 ID=Msa1348090-mRNA-1:exon:6243;Parent=Msa1348090-mRNA-1
tig0010194 exon 67029 67166 67029 ID=Msa1348090-mRNA-1:exon:6242;Parent=Msa1348090-mRNA-1
tig0010194 exon 67371 69596 67371 ID=Msa1348090-mRNA-1:exon:6241;Parent=Msa1348090-mRNA-1
tig0010194 exon 69775 69883 69775 ID=Msa1348090-mRNA-1:exon:6240;Parent=Msa1348090-mRNA-1
tig0010194 exon 70000 70037 70000 ID=Msa1348090-mRNA-1:exon:6239;Parent=Msa1348090-mRNA-1
tig0010194 exon 70190 70312 70190 ID=Msa1348090-mRNA-1:exon:6238;Parent=Msa1348090-mRNA-1
tig0010194 exon 70412 70612 70412 ID=Msa1348090-mRNA-1:exon:6237;Parent=Msa1348090-mRNA-1
tig0010194 exon 70770 71155 70770 ID=Msa1348090-mRNA-1:exon:6236;Parent=Msa1348090-mRNA-1
tig0010194 five_prime_UTR 70845 71155 70845 ID=Msa1348090-mRNA-1:five_prime_utr;Parent=Msa1348090-mRNA-1
tig0010194 CDS 70770 70844 70770 ID=Msa1348090-mRNA-1:cds;Parent=Msa1348090-mRNA-1
tig0010194 CDS 70412 70612 70412 ID=Msa1348090-mRNA-1:cds;Parent=Msa1348090-mRNA-1
tig0010194 CDS 70190 70312 70190 ID=Msa1348090-mRNA-1:cds;Parent=Msa1348090-mRNA-1
tig0010194 CDS 70000 70037 70000 ID=Msa1348090-mRNA-1:cds;Parent=Msa1348090-mRNA-1
tig0010194 CDS 69775 69883 69775 ID=Msa1348090-mRNA-1:cds;Parent=Msa1348090-mRNA-1
tig0010194 CDS 67371 69596 67371 ID=Msa1348090-mRNA-1:cds;Parent=Msa1348090-mRNA-1
tig0010194 CDS 67029 67166 67029 ID=Msa1348090-mRNA-1:cds;Parent=Msa1348090-mRNA-1
tig0010194 CDS 66497 66624 66497 ID=Msa1348090-mRNA-1:cds;Parent=Msa1348090-mRNA-1
tig0010194 CDS 66098 66341 66098 ID=Msa1348090-mRNA-1:cds;Parent=Msa1348090-mRNA-1
tig0010194 three_prime_UTR 65706 66097 65706 ID=Msa1348090-mRNA-1:three_prime_utr;Parent=Msa1348090-mRNA-1
Gene Sequence

>Msa1348090

ATGTTCAGATGGAGGAGTGATAAAAACAAAGTCAAAGCTGTTTTCAAACTACATTTCCATCTCACTCTCACTCAGGTGCTGCAATCTGGTGTGGATTCTTTGGTACTCTCTATTGTTCCTGGAGATAATGGAAAACCAACTACAAGATTAGAGAAAGCTATAGTTCATGATGGAAATTGTAAATGGGAGAATCCTGTTTATGAAGCTGTTAAGTTTAATCAGGATCCTAAGAATGGGAAATTTAGTGAAAAACTTTATTATTTTGTGATTTCAACGGGATTATCAAAAGCTAGTATCTTTGGAGAAGTTTCTATAGATTTTGCTGATTATGCAGAAGCTACAAAGATTTCTTCTGTTTCTCTTCCCATCAAGAATTCTCATTCGGATGCCGTCTTGCATGTATCTATTCAGAGACTACAAGAAAATAGTGATAAAAGAGAGGAGGAGGAATGTGAAGATGCCAAACAAAAACTCAATGATAGGAGCTTAAGGACCTATTTAAGCACTGGAGATATAGATGGATGCACTAAAAGTGATTCTTCTGAAATTTCACAGGATGTGTCTGCCAATGCAAACACAAGAGCTGGATTGAGTGCTGATTGTAGGACATCTAGTGGATCTGACATTACAATGTCAAGTTCCGATGGAAGCTCTGGACTTGATACTCCCCGAGAACTTGGACTAAGAAATACTAGCATCCACCCTACAACAAATGGTGCTCCTTCAGTCACCAGCCACTCTTCAGAGCTTCAAAATCTTGCTGTGGATGGCTTAGCGTCAATGTTTGATGTACATCAGAGATCATCACATTTCCGGGACTGCTCAGCTGGTTCAGAACTTGGTCTGAGTATGGACGGTTCAATACATGGCTCTCAAGATGCCCTTCCTCGGGAAAGTTCCCATCAGGCAGCGGATGTAGAGAATGAAAAACTCAAGGCTGAAGTTGCTGCTTTGGCCAGGCAGGTGGATGTGTCAGACATGGAACTTCAAACTCTTCGGAAACAAATCGTAAAGGAAAGCAAAAGAGGGCAGGAGCTCGCAAAGGAAGTTATCAGCTTGAAAGAGGAAAGAGATACACTCAAGATAGAGTGCGAAAACCTCAAATCTTTTCGCAAACGAAGGGATGAGGCTAAAGTGAGTAGCAGATCACAATTGGAAGGTGGGGATCTTCATACTCTTATTGAAGAAATCAGACAAGAATTGAATCACGAGAAGGACATGAATGCAAATCTCAGATTACAGTTAAATAAGACACAGGAATCAAATGCTGAACTAGTTCTTGCTGTTCAGGACCTCGATGCAATGTTAGAGCAGAAAAATAAGGAAATACACAGTCTTTCCAATAATTACAAACAGACTAAAAACTCCCATGATTTAGGGAGAAATGTCTCTAATTGCGAAACAGACGATGAACAGAAAGAATTGGATGAGCTTGTTAAGGATCAAAGCAGTGCCAAGGAGACACACTTACTTGAGCAAAAAATCACGGATCTCTATGGTGAGATAGAGATGTATAGGAGAGACAAAGATGAGTTAGAGATGCAGATGGAGCAGCTTGCACTGGACTATGAAATTTTGAAACAGGAAAACCATGAATTTGCATATAAGATGGAACAGAGCGAACTGCAAGAACAGCTAAAATTTCAATATGAATGCTCTTCTCCTCCTGGTATAAATGACTTTGAAACACATATCCAGAATCTGGAAAATCAACTCAAGAAACAATCGGATGAATTCTCAAATTCTCTGGCTACCATCGAGTCTCTTGAGAACCAGATCCGCAAGTTAGAGGAGGAACTGGAGAAACAAGCCCAAGGATTTGAAGCTGACTTAGATGCAGTGACACATGACAAAGTTAAGCAGGAGCAAAGAGCCATTCGAGCTGAGGAAGCTTTGCGAAACACCAGACTTAAAAATGCTAATACTGCAGAGAGGCTTCAAGAAGAATTCAAAAGGCTATCAATGCAGATGGCCACTACATTTGATGCAAATGAGACGGCTACCAGGAGAGCGCTGACAGAAGCAAGTGAACTTCGTGTGCAGAAGAGACTACTGGAGGAAATGCTGTGTAAAGTCAAAGAAGAGCTTGAATCAGTCAAAGCCGATTATGAGGTAAAACTGAATGAAATTTCCAACAAAAAAGATGCCATGACAGTTCAGATGCAACAGATGTTGTTGGAAATTGACGACAAGTCCATGCAACTTGAAAATCAGAAAAAGCACGAGGAACAAGTTGGCAGGGATTTCTCCGAGGAGATTCAGTTGCTAAAAGCTGAGAATGAAAAGCTTACAGTGGAGATCTCGTGCTTATCTGAGCAAGCAAAACAAAAAGAAATCTTAAGTTCTGACTTGGAACTTATGAAGAAATCACTTGAGGAATATGAGATTCTTTTAAATACTCGAAAGGAAGAAAGAAATGAGCTTGTGAGTACAATTGCTTTGTTGAAGAAGGAAGCAGAACGGTCACTTGATGAGCTAAATAGGATGATGCATCTCAAGGATGAAGAGGAGAAAGTGGGTAAACTCTTGCGTTCAGAGTTAGAAGCACTTAAAGCTCAATATAACAACCTGAAACATTCTCTTATTGATGATGAGACTGAGAAAGAAAAACTAAGACAACAAATTTTCCATCTTAACGATGAACTGAAGAAGAAGGACGATGCATTAACCTACATTGAGACTAAAACCATTCCAACTAACCAAAAAAGTGCTTCAATTCTTCATGACACCAAAGAAATGACAGATCTGAGAGAGAAAATAAAAATGCTTGAGGACCTGATAAAATCAAAGGAGACTGCTTTGGAAGCATCGGCTTCTTCATATTTGGAGAAGGAAAGAGAACTTCAATCCAAAATTGAGGAACTGGAGGACAAAGTGGAGGAACTCAATCAGAGCATTGCTTTGCCAAAGGTTGTTGCGGATAAGAGTTTTACTACTACAAGTGACGGATCTGAAGAAGTGCGATGTACAATTGAGCATCTCAATGATACTTCATGTATATCGGAAGAAAATGGGGTTGTGGTGTCATCAGTCAAGAGTCATGCACATTTGCCAGAGAAAGAAGCAGAAATACCAGTAATGGATAGTAATGGCAATGGCAGCCTCAGCAACGTTTTAACTGAATTATCATCATTGAAAGAAAGAGACAAATCAATGGAAACTGAACTGAAAGAGTTGCAAGAAAGATACTCAGAAATGAGTCTCAAATTTGCAGAGGTAGAAGGTGAAAGACAAAAGCTTGTTATGACTGTAAGAAGCCTCAAGAATGCTAGGAAGGGCTAA

Protein sequence

>Msa1348090

MFRWRSDKNKVKAVFKLHFHLTLTQVLQSGVDSLVLSIVPGDNGKPTTRLEKAIVHDGNCKWENPVYEAVKFNQDPKNGKFSEKLYYFVISTGLSKASIFGEVSIDFADYAEATKISSVSLPIKNSHSDAVLHVSIQRLQENSDKREEEECEDAKQKLNDRSLRTYLSTGDIDGCTKSDSSEISQDVSANANTRAGLSADCRTSSGSDITMSSSDGSSGLDTPRELGLRNTSIHPTTNGAPSVTSHSSELQNLAVDGLASMFDVHQRSSHFRDCSAGSELGLSMDGSIHGSQDALPRESSHQAADVENEKLKAEVAALARQVDVSDMELQTLRKQIVKESKRGQELAKEVISLKEERDTLKIECENLKSFRKRRDEAKVSSRSQLEGGDLHTLIEEIRQELNHEKDMNANLRLQLNKTQESNAELVLAVQDLDAMLEQKNKEIHSLSNNYKQTKNSHDLGRNVSNCETDDEQKELDELVKDQSSAKETHLLEQKITDLYGEIEMYRRDKDELEMQMEQLALDYEILKQENHEFAYKMEQSELQEQLKFQYECSSPPGINDFETHIQNLENQLKKQSDEFSNSLATIESLENQIRKLEEELEKQAQGFEADLDAVTHDKVKQEQRAIRAEEALRNTRLKNANTAERLQEEFKRLSMQMATTFDANETATRRALTEASELRVQKRLLEEMLCKVKEELESVKADYEVKLNEISNKKDAMTVQMQQMLLEIDDKSMQLENQKKHEEQVGRDFSEEIQLLKAENEKLTVEISCLSEQAKQKEILSSDLELMKKSLEEYEILLNTRKEERNELVSTIALLKKEAERSLDELNRMMHLKDEEEKVGKLLRSELEALKAQYNNLKHSLIDDETEKEKLRQQIFHLNDELKKKDDALTYIETKTIPTNQKSASILHDTKEMTDLREKIKMLEDLIKSKETALEASASSYLEKERELQSKIEELEDKVEELNQSIALPKVVADKSFTTTSDGSEEVRCTIEHLNDTSCISEENGVVVSSVKSHAHLPEKEAEIPVMDSNGNGSLSNVLTELSSLKERDKSMETELKELQERYSEMSLKFAEVEGERQKLVMTVRSLKNARKG*