Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0501440 | XP_024635934.1 | 98.353 | 425 | 4 | 2 | 1 | 423 | 1 | 424 | 0.0 | 856 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0501440 | sp|Q8GYM3|AUG4_ARATH | 72.706 | 425 | 107 | 6 | 1 | 421 | 1 | 420 | 0.0 | 575 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0501440 | G7IY17 | 98.353 | 425 | 4 | 2 | 1 | 423 | 1 | 424 | 0.0 | 856 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0042640 | Msa0501440 | 0.803007 | 4.280584e-49 | -8.615850e-47 |
| Msa0077570 | Msa0501440 | -0.801084 | 1.063920e-48 | -8.615850e-47 |
| Msa0102240 | Msa0501440 | 0.802394 | 5.728925e-49 | -8.615850e-47 |
| Msa0408380 | Msa0501440 | 0.844642 | 6.662214e-59 | -8.615850e-47 |
| Msa0412790 | Msa0501440 | 0.815842 | 7.513822e-52 | -8.615850e-47 |
| Msa0457560 | Msa0501440 | 0.833587 | 4.894194e-56 | -8.615850e-47 |
| Msa0501440 | Msa0513970 | 0.813537 | 2.434545e-51 | -8.615850e-47 |
| Msa0501440 | Msa0572760 | 0.807953 | 3.929082e-50 | -8.615850e-47 |
| Msa0501440 | Msa0580810 | 0.802972 | 4.353595e-49 | -8.615850e-47 |
| Msa0501440 | Msa0719270 | 0.805982 | 1.025985e-49 | -8.615850e-47 |
| Msa0501440 | Msa0734250 | 0.808651 | 2.788807e-50 | -8.615850e-47 |
| Msa0501440 | Msa0745140 | 0.803539 | 3.321716e-49 | -8.615850e-47 |
| Msa0501440 | Msa0776640 | 0.807675 | 4.502489e-50 | -8.615850e-47 |
| Msa0501440 | Msa0840520 | 0.804251 | 2.362401e-49 | -8.615850e-47 |
| Msa0501440 | Msa0865420 | 0.805343 | 1.397520e-49 | -8.615850e-47 |
| Msa0501440 | Msa1023210 | 0.820278 | 7.464438e-53 | -8.615850e-47 |
| Msa0501440 | Msa1106590 | 0.804460 | 2.137965e-49 | -8.615850e-47 |
| Msa0501440 | Msa1130060 | 0.801900 | 7.239407e-49 | -8.615850e-47 |
| Msa0501440 | Msa1407840 | 0.800792 | 1.220680e-48 | -8.615850e-47 |
| Msa0501440 | Msa1417380 | 0.818121 | 2.311860e-52 | -8.615850e-47 |
| Msa0501440 | Msa1436620 | 0.803968 | 2.705915e-49 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0501440 | MtrunA17_Chr3g0099041 | 98.353 | 425 | 4 | 2 | 1 | 423 | 1 | 424 | 0.0 | 856 |
| Msa0501440 | MtrunA17_Chr5g0421171 | 96.604 | 265 | 6 | 2 | 99 | 361 | 4 | 267 | 0.0 | 513 |
| Msa0501440 | MtrunA17_Chr5g0421161 | 97.059 | 102 | 3 | 0 | 1 | 102 | 1 | 102 | 7.75e-68 | 211 |
| Msa0501440 | MtrunA17_Chr5g0421181 | 97.778 | 45 | 1 | 0 | 379 | 423 | 6 | 50 | 1.41e-24 | 95.5 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0501440 | AT1G50710.1 | 72.706 | 425 | 107 | 6 | 1 | 421 | 1 | 420 | 0.0 | 575 |
Find 118 sgRNAs with CRISPR-Local
Find 606 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GCATTACACCGGCTTATTTA+TGG | 0.152340 | 3_4:-42633722 | Msa0501440:CDS |
| GAATAAAGCTCAAACCTTTC+TGG | 0.169212 | 3_4:+42633284 | None:intergenic |
| TAATTATTCTCTGGCTTCTA+TGG | 0.217710 | 3_4:-42633790 | Msa0501440:CDS |
| GAGTATCATCAAGCCATTTC+TGG | 0.233393 | 3_4:-42635356 | Msa0501440:CDS |
| TAGGGAAAGACTCCGTTATT+TGG | 0.248087 | 3_4:-42636268 | Msa0501440:CDS |
| TCTCCATCTTTCGAAATTAG+AGG | 0.303118 | 3_4:+42633948 | None:intergenic |
| TGTGTTTATTTAACCTGGTT+TGG | 0.335320 | 3_4:-42627788 | Msa0501440:three_prime_UTR |
| GTTATCAGATGCCTTTGTAT+TGG | 0.344942 | 3_4:-42633469 | Msa0501440:CDS |
| TGATCCAAACGGTGTCGTTT+TGG | 0.346848 | 3_4:+42636734 | None:intergenic |
| AACGACACCGTTTGGATCAA+TGG | 0.355173 | 3_4:-42636730 | Msa0501440:exon |
| GAAAGAATCATTTATTTGTT+TGG | 0.366472 | 3_4:+42636850 | None:intergenic |
| TGAAGGTAGTATACGGGAAT+TGG | 0.371404 | 3_4:+42627549 | None:intergenic |
| ACAAAACAAATACAGGGTTA+TGG | 0.378636 | 3_4:+42627726 | None:intergenic |
| CAAAACAAATACAGGGTTAT+GGG | 0.380984 | 3_4:+42627727 | None:intergenic |
| GGCGGTCTTTATCCACAGTT+TGG | 0.385184 | 3_4:-42635305 | Msa0501440:CDS |
| TACTCGTTTGCGTGAGTACC+AGG | 0.386654 | 3_4:-42628213 | Msa0501440:CDS |
| CAGGTATTGGAGCAAATACT+TGG | 0.390965 | 3_4:-42632135 | Msa0501440:CDS |
| CCACCAACTCCAGGTTCAAC+TGG | 0.397333 | 3_4:+42633765 | None:intergenic |
| ATTTATTTGTTTGGTAGTAA+TGG | 0.399455 | 3_4:+42636859 | None:intergenic |
| ATCGGTGGAATTAGAGATAC+TGG | 0.399514 | 3_4:-42635326 | Msa0501440:CDS |
| ATTTAAAACGTATGTGAGAT+AGG | 0.403955 | 3_4:-42627831 | Msa0501440:exon |
| TCCACCAAAACGACACCGTT+TGG | 0.406521 | 3_4:-42636738 | Msa0501440:five_prime_UTR |
| ATAAGTAACAAAACAAATAC+AGG | 0.411865 | 3_4:+42627719 | None:intergenic |
| GCTTGGAGTGGTATAATTAG+AGG | 0.417042 | 3_4:+42633830 | None:intergenic |
| TAGTGGGGTTAATTATTCTC+TGG | 0.419337 | 3_4:-42633799 | Msa0501440:CDS |
| AAGATCGTTGTAGAGAGGTT+TGG | 0.420497 | 3_4:+42636611 | None:intergenic |
| TTTGGTTCTCTATATGTGAA+TGG | 0.426874 | 3_4:-42627770 | Msa0501440:three_prime_UTR |
| CCGTTTGGATCAATGGTTAA+GGG | 0.431161 | 3_4:-42636723 | Msa0501440:exon |
| ACCGTTTGGATCAATGGTTA+AGG | 0.444465 | 3_4:-42636724 | Msa0501440:exon |
| ATACCATGAGTTTAAAATTG+AGG | 0.446501 | 3_4:-42631943 | Msa0501440:intron |
| CAGGGTGAAGTTGTTAATTG+AGG | 0.450010 | 3_4:-42632461 | Msa0501440:CDS |
| CCACCTTGGTTACACAAGAA+TGG | 0.450622 | 3_4:+42627603 | None:intergenic |
| TTTATCCACAGTTTGGACTA+AGG | 0.454943 | 3_4:-42635298 | Msa0501440:CDS |
| TGGACTAAGGAACTCTCCTC+AGG | 0.458330 | 3_4:-42635285 | Msa0501440:intron |
| AGTATCATCAAGCCATTTCT+GGG | 0.466636 | 3_4:-42635355 | Msa0501440:CDS |
| CGCCACTGCTTGGCTCCTGA+TGG | 0.469158 | 3_4:-42636645 | Msa0501440:CDS |
| CATCTTCACGGCTTCCAGAA+AGG | 0.471098 | 3_4:-42633298 | Msa0501440:intron |
| CTCCAAGCAGTTCTGTTAGT+GGG | 0.475426 | 3_4:-42633815 | Msa0501440:CDS |
| GTTCTAGCTGATCGATGAGT+TGG | 0.475893 | 3_4:+42636667 | None:intergenic |
| ACTTGTCAAAGATTTGAAGT+TGG | 0.480782 | 3_4:-42632100 | Msa0501440:CDS |
| TATAATTATACCACAGATAA+CGG | 0.491692 | 3_4:+42633678 | None:intergenic |
| CCAGTTGAACCTGGAGTTGG+TGG | 0.495469 | 3_4:-42633765 | Msa0501440:CDS |
| CTGCCTCTAATTTCGAAAGA+TGG | 0.495699 | 3_4:-42633951 | Msa0501440:CDS |
| ACCGATGCTAGACCCAGAAA+TGG | 0.499362 | 3_4:+42635343 | None:intergenic |
| TTTATTGTGTTTATTTAACC+TGG | 0.500244 | 3_4:-42627793 | Msa0501440:three_prime_UTR |
| TCTATGGATCCAGTTGAACC+TGG | 0.503762 | 3_4:-42633774 | Msa0501440:CDS |
| TTCTAGCTGATCGATGAGTT+GGG | 0.504370 | 3_4:+42636668 | None:intergenic |
| TGTAATGCCAAGAAAACGAT+TGG | 0.504419 | 3_4:+42633737 | None:intergenic |
| TCAAATGATTGTTGCTGAAG+CGG | 0.505178 | 3_4:-42633988 | Msa0501440:CDS |
| AATGGATCAGTAAGAGATCA+AGG | 0.506323 | 3_4:+42627621 | None:intergenic |
| GAAGTCAAAGTTCATCTTCA+CGG | 0.506659 | 3_4:-42633310 | Msa0501440:CDS |
| TCTCTCGCACGTGAGGTAGA+TGG | 0.509863 | 3_4:-42633516 | Msa0501440:CDS |
| TACCTGCGCTTCATAAGATC+AGG | 0.515407 | 3_4:-42629345 | Msa0501440:intron |
| CCCTTAACCATTGATCCAAA+CGG | 0.519926 | 3_4:+42636723 | None:intergenic |
| GGCTAGAGAGGAAATGTGTA+GGG | 0.523153 | 3_4:-42636286 | Msa0501440:CDS |
| AAGAGAAGAAGCGGCTCTGA+GGG | 0.532964 | 3_4:-42632431 | Msa0501440:CDS |
| TCAGCTAGAACGCCACTGCT+TGG | 0.539293 | 3_4:-42636655 | Msa0501440:CDS |
| TTCTGAGGCTATTGCAATGG+TGG | 0.540621 | 3_4:-42635381 | Msa0501440:CDS |
| TTATTCTGAGGCTATTGCAA+TGG | 0.542083 | 3_4:-42635384 | Msa0501440:CDS |
| GTCGCAGGCTATTTATTCTG+AGG | 0.542190 | 3_4:-42635396 | Msa0501440:intron |
| GTTTGATTTGCAGGCTAGAG+AGG | 0.544445 | 3_4:-42636298 | Msa0501440:intron |
| CACTGGTGCTAGCACTGTCG+AGG | 0.547265 | 3_4:+42633877 | None:intergenic |
| AGGTATTGGAGCAAATACTT+GGG | 0.548782 | 3_4:-42632134 | Msa0501440:CDS |
| ACTCCAAGCAGTTCTGTTAG+TGG | 0.551406 | 3_4:-42633816 | Msa0501440:CDS |
| GCCATTTCTGGGTCTAGCAT+CGG | 0.553047 | 3_4:-42635344 | Msa0501440:CDS |
| CTCGACAGTGCTAGCACCAG+TGG | 0.557774 | 3_4:-42633876 | Msa0501440:CDS |
| ATACCGTGGCTTCCAAATAA+CGG | 0.567584 | 3_4:+42636256 | None:intergenic |
| ATGAGTTGGGATACATCGGT+AGG | 0.568392 | 3_4:+42636681 | None:intergenic |
| TTGGGAACACCACCAACTCC+AGG | 0.569515 | 3_4:+42633756 | None:intergenic |
| ACCCCACTAACAGAACTGCT+TGG | 0.570315 | 3_4:+42633813 | None:intergenic |
| ATCCATCAGGAGCCAAGCAG+TGG | 0.576632 | 3_4:+42636643 | None:intergenic |
| GCTTGAGTTGACCACGCCAC+TGG | 0.577578 | 3_4:+42633860 | None:intergenic |
| TACCTGATCTTATGAAGCGC+AGG | 0.580965 | 3_4:+42629343 | None:intergenic |
| AGGCTAGAGAGGAAATGTGT+AGG | 0.581468 | 3_4:-42636287 | Msa0501440:CDS |
| GTAATGCCAAGAAAACGATT+GGG | 0.585136 | 3_4:+42633738 | None:intergenic |
| TGAGTTTGCCATAAATAAGC+CGG | 0.587858 | 3_4:+42633714 | None:intergenic |
| TTGTCACCTTTACAATGTCG+TGG | 0.587951 | 3_4:+42628153 | None:intergenic |
| TTGGAAATGAGAGATCCATC+AGG | 0.592812 | 3_4:+42636630 | None:intergenic |
| TCGTATGTCTCTCGCACGTG+AGG | 0.595105 | 3_4:-42633523 | Msa0501440:CDS |
| ACAGTACCACGACATTGTAA+AGG | 0.596583 | 3_4:-42628159 | Msa0501440:intron |
| AGTTGAAGATCGTTGTAGAG+AGG | 0.598511 | 3_4:+42636606 | None:intergenic |
| TCCAAGCAGTTCTGTTAGTG+GGG | 0.599317 | 3_4:-42633814 | Msa0501440:CDS |
| GGTATTGGAGCAAATACTTG+GGG | 0.603674 | 3_4:-42632133 | Msa0501440:CDS |
| CTATATGTGAATGGTGTGAA+AGG | 0.609204 | 3_4:-42627761 | Msa0501440:three_prime_UTR |
| CAAAGTGAGGATCGACACCC+TGG | 0.609515 | 3_4:+42628195 | None:intergenic |
| AGGATGAGTTGCAGAAAACA+TGG | 0.610322 | 3_4:-42631982 | Msa0501440:CDS |
| AACAAATACAGGGTTATGGG+AGG | 0.614328 | 3_4:+42627730 | None:intergenic |
| CAGTGCTAGCACCAGTGGCG+TGG | 0.616239 | 3_4:-42633871 | Msa0501440:CDS |
| TTCAATTGCATATAATAAAG+CGG | 0.617032 | 3_4:-42629215 | Msa0501440:intron |
| CACATATAGAGAACCAAACC+AGG | 0.617351 | 3_4:+42627775 | None:intergenic |
| ATTTCTGGGTCTAGCATCGG+TGG | 0.619214 | 3_4:-42635341 | Msa0501440:CDS |
| TCTCGTCGAGGCTACTGAAG+AGG | 0.620383 | 3_4:-42629239 | Msa0501440:CDS |
| ATCGATGAGTTGGGATACAT+CGG | 0.620438 | 3_4:+42636677 | None:intergenic |
| GGATATTGAAAGAGAAGAAG+CGG | 0.620795 | 3_4:-42632440 | Msa0501440:CDS |
| ACTCCGTTATTTGGAAGCCA+CGG | 0.621535 | 3_4:-42636259 | Msa0501440:intron |
| GATCCAGTTGAACCTGGAGT+TGG | 0.621670 | 3_4:-42633768 | Msa0501440:CDS |
| TTAGAATATCAGCTCCTCCA+CGG | 0.627931 | 3_4:-42629388 | Msa0501440:CDS |
| AAAGAGAAGAAGCGGCTCTG+AGG | 0.629168 | 3_4:-42632432 | Msa0501440:CDS |
| ACAAATACAGGGTTATGGGA+GGG | 0.634943 | 3_4:+42627731 | None:intergenic |
| CTTGCAATGTCGTCAAAGTG+AGG | 0.637558 | 3_4:+42628182 | None:intergenic |
| ACTCGTTTGCGTGAGTACCA+GGG | 0.639453 | 3_4:-42628212 | Msa0501440:CDS |
| TGAGTTGGGATACATCGGTA+GGG | 0.640066 | 3_4:+42636682 | None:intergenic |
| GATCCATTCTTGTGTAACCA+AGG | 0.641001 | 3_4:-42627606 | Msa0501440:three_prime_UTR |
| ACCGTTGTCATCCAATACAA+AGG | 0.646327 | 3_4:+42633458 | None:intergenic |
| ACTCGTTAGTGTAAGTTCCG+TGG | 0.648265 | 3_4:+42629371 | None:intergenic |
| ACTGGTGCTAGCACTGTCGA+GGG | 0.650792 | 3_4:+42633878 | None:intergenic |
| AGAAATTGGAGAACATGCAA+TGG | 0.652906 | 3_4:-42627876 | Msa0501440:CDS |
| TCAGCAAACACCGTTATCTG+TGG | 0.654183 | 3_4:-42633688 | Msa0501440:intron |
| GCCTTTGTATTGGATGACAA+CGG | 0.654509 | 3_4:-42633459 | Msa0501440:intron |
| GTTGGGATACATCGGTAGGG+AGG | 0.657190 | 3_4:+42636685 | None:intergenic |
| AACTATTCGAATGCACCGCG+AGG | 0.658577 | 3_4:+42627674 | None:intergenic |
| CCATTCTTGTGTAACCAAGG+TGG | 0.680054 | 3_4:-42627603 | Msa0501440:three_prime_UTR |
| ACTAACAGAACTGCTTGGAG+TGG | 0.681550 | 3_4:+42633818 | None:intergenic |
| CGTTAGTGTAAGTTCCGTGG+AGG | 0.686226 | 3_4:+42629374 | None:intergenic |
| GAGTTCCTTAGTCCAAACTG+TGG | 0.687187 | 3_4:+42635293 | None:intergenic |
| TAAGTAACAAAACAAATACA+GGG | 0.707681 | 3_4:+42627720 | None:intergenic |
| ATATGAAACATCATTCCTCG+CGG | 0.750428 | 3_4:-42627689 | Msa0501440:three_prime_UTR |
| GGTGGAATTAGAGATACTGG+CGG | 0.755878 | 3_4:-42635323 | Msa0501440:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TTCTCTATTTTTTTTTTTTT+TGG | - | chr3_4:42631212-42631231 | Msa0501440:intron | 10.0% |
| !!! | TTTTACTTTTAATTTTTCAT+AGG | - | chr3_4:42632640-42632659 | Msa0501440:intron | 10.0% |
| !!! | TTTACTTTTAATTTTTCATA+GGG | - | chr3_4:42632641-42632660 | Msa0501440:intron | 10.0% |
| !! | ATTTATATTATATGTTAGTT+TGG | - | chr3_4:42632744-42632763 | Msa0501440:intron | 10.0% |
| !!! | TTTATATTATATGTTAGTTT+GGG | - | chr3_4:42632745-42632764 | Msa0501440:intron | 10.0% |
| !!! | ATAGTGAAATTTTAATAATA+TGG | - | chr3_4:42633105-42633124 | Msa0501440:intron | 10.0% |
| !! | TTAAAACTAAATATACAATA+TGG | - | chr3_4:42633362-42633381 | Msa0501440:intron | 10.0% |
| !!! | TTTAGTTTTAATTTGATTTA+TGG | - | chr3_4:42634348-42634367 | Msa0501440:intron | 10.0% |
| !!! | TTTGAAATATTAATGATTTT+AGG | + | chr3_4:42635705-42635724 | None:intergenic | 10.0% |
| !!! | TTGAAATAATTTTTAGAATA+TGG | - | chr3_4:42636097-42636116 | Msa0501440:intron | 10.0% |
| !! | AATTGAATAAAATTCGAAAA+TGG | - | chr3_4:42628022-42628041 | Msa0501440:intron | 15.0% |
| !! | ATTGAATAAAATTCGAAAAT+GGG | - | chr3_4:42628023-42628042 | Msa0501440:intron | 15.0% |
| !!! | ATATTGTCATTTCTAAAATA+CGG | + | chr3_4:42628500-42628519 | None:intergenic | 15.0% |
| !!! | TATGTTTAGATAAAGAATTT+TGG | + | chr3_4:42628771-42628790 | None:intergenic | 15.0% |
| !! | ATAAATCACTAAAATAAGAA+TGG | + | chr3_4:42629005-42629024 | None:intergenic | 15.0% |
| !! | ATTTCATACCTTAAATAAAT+AGG | - | chr3_4:42629354-42629373 | Msa0501440:CDS | 15.0% |
| !! | ATTAAGAAAATAGAAAGAAT+GGG | + | chr3_4:42629653-42629672 | None:intergenic | 15.0% |
| !! | TATTAAGAAAATAGAAAGAA+TGG | + | chr3_4:42629654-42629673 | None:intergenic | 15.0% |
| !! | TATGCATTATTATATGTTAA+AGG | - | chr3_4:42629724-42629743 | Msa0501440:intron | 15.0% |
| !! | TGTATAATTATGAATATAGT+GGG | - | chr3_4:42629792-42629811 | Msa0501440:intron | 15.0% |
| !!! | ATTTCCTTTGATTTATAATT+TGG | - | chr3_4:42631061-42631080 | Msa0501440:intron | 15.0% |
| !! | TCCAAAATATAAAAAGAATT+AGG | + | chr3_4:42631190-42631209 | None:intergenic | 15.0% |
| !!! | ATCACTTTTTATTTTTTCAT+TGG | - | chr3_4:42631273-42631292 | Msa0501440:intron | 15.0% |
| !! | ATAACAATTGCATATATTTA+AGG | - | chr3_4:42631330-42631349 | Msa0501440:intron | 15.0% |
| !!! | ATTTTCATGTTTAAGTTATA+TGG | - | chr3_4:42631793-42631812 | Msa0501440:intron | 15.0% |
| !!! | TTTATTTTTTATTTTGCCAT+TGG | + | chr3_4:42633001-42633020 | None:intergenic | 15.0% |
| !!! | ACATTAAAAATGAGAAATTT+TGG | - | chr3_4:42634021-42634040 | Msa0501440:intron | 15.0% |
| !! | ATTGAAACTAACAAAATAAT+TGG | - | chr3_4:42634674-42634693 | Msa0501440:intron | 15.0% |
| !! | TCATTATCTATTGAATATAA+CGG | - | chr3_4:42635401-42635420 | Msa0501440:intron | 15.0% |
| !! | ATTAGATTAAAACAGAAATT+CGG | + | chr3_4:42635523-42635542 | None:intergenic | 15.0% |
| !!! | TTTATTTATTTCTGATATGA+TGG | - | chr3_4:42635559-42635578 | Msa0501440:intron | 15.0% |
| !! | TTCACTAATATATAAAAAAC+TGG | - | chr3_4:42635884-42635903 | Msa0501440:intron | 15.0% |
| !! | TCACTAATATATAAAAAACT+GGG | - | chr3_4:42635885-42635904 | Msa0501440:intron | 15.0% |
| !! | ATTGAAATGATATTAAAACA+TGG | + | chr3_4:42636490-42636509 | None:intergenic | 15.0% |
| !!! | ATTTATTTGTTTGGTAGTAA+TGG | + | chr3_4:42627586-42627605 | None:intergenic | 20.0% |
| !! | GAAAGAATCATTTATTTGTT+TGG | + | chr3_4:42627595-42627614 | None:intergenic | 20.0% |
| !! | TAAAAAGCTTGAATTAAGTA+AGG | + | chr3_4:42627891-42627910 | None:intergenic | 20.0% |
| !!! | TACAATTTGACTCAATTTTT+CGG | + | chr3_4:42627934-42627953 | None:intergenic | 20.0% |
| !! | AATTGAGTCAAATTGTAAAA+TGG | - | chr3_4:42627937-42627956 | Msa0501440:intron | 20.0% |
| !! | ATTGAGTCAAATTGTAAAAT+GGG | - | chr3_4:42627938-42627957 | Msa0501440:intron | 20.0% |
| !! | TTTCAAACATTCAACAAAAT+GGG | + | chr3_4:42628002-42628021 | None:intergenic | 20.0% |
| !!! | TTTTCAAACATTCAACAAAA+TGG | + | chr3_4:42628003-42628022 | None:intergenic | 20.0% |
| !! | TTCCCAAAATTTAACAAAAT+GGG | + | chr3_4:42628087-42628106 | None:intergenic | 20.0% |
| !! | TTTCCCAAAATTTAACAAAA+TGG | + | chr3_4:42628088-42628107 | None:intergenic | 20.0% |
| !!! | TTTGTTAAATTTTGGGAAAA+TGG | - | chr3_4:42628089-42628108 | Msa0501440:intron | 20.0% |
| !! | AAAATGGAATAGAATTTAGT+TGG | - | chr3_4:42628105-42628124 | Msa0501440:intron | 20.0% |
| !! | AAATGGAATAGAATTTAGTT+GGG | - | chr3_4:42628106-42628125 | Msa0501440:intron | 20.0% |
| !!! | TTTTTCTTTTAACATGTAAC+AGG | + | chr3_4:42628319-42628338 | None:intergenic | 20.0% |
| !!! | GTATTTTAGAAATGACAATA+TGG | - | chr3_4:42628499-42628518 | Msa0501440:intron | 20.0% |
| !!! | TTTAGATAAAGAATTTTGGA+GGG | + | chr3_4:42628767-42628786 | None:intergenic | 20.0% |
| !!! | AAATATTTGGTTTTTGGTAT+TGG | - | chr3_4:42628816-42628835 | Msa0501440:intron | 20.0% |
| !!! | AGTGATTTATATTTTTGATG+TGG | - | chr3_4:42629015-42629034 | Msa0501440:intron | 20.0% |
| !! | AAATAATATTTCAAAACCTG+AGG | + | chr3_4:42629176-42629195 | None:intergenic | 20.0% |
| !!! | AGGTTTTGAAATATTATTTC+TGG | - | chr3_4:42629177-42629196 | Msa0501440:intron | 20.0% |
| !! | CTGTATAATTATGAATATAG+TGG | - | chr3_4:42629791-42629810 | Msa0501440:intron | 20.0% |
| !!! | GGATTTTAATTTAGATGTTA+CGG | - | chr3_4:42629816-42629835 | Msa0501440:intron | 20.0% |
| !!! | AGAAACTATTCATTGTTATT+AGG | - | chr3_4:42630111-42630130 | Msa0501440:intron | 20.0% |
| !! | TATAATTATACCACAGATAA+CGG | + | chr3_4:42630767-42630786 | None:intergenic | 20.0% |
| !!! | TGCATATTTCTGATATAATA+TGG | - | chr3_4:42631017-42631036 | Msa0501440:intron | 20.0% |
| !!! | GCATATTTCTGATATAATAT+GGG | - | chr3_4:42631018-42631037 | Msa0501440:intron | 20.0% |
| !!! | CATATTTCTGATATAATATG+GGG | - | chr3_4:42631019-42631038 | Msa0501440:intron | 20.0% |
| !! | AGAACCAAATTATAAATCAA+AGG | + | chr3_4:42631068-42631087 | None:intergenic | 20.0% |
| !!! | GCCTAATTCTTTTTATATTT+TGG | - | chr3_4:42631186-42631205 | Msa0501440:intron | 20.0% |
| !!! | TTTTTTTGGATAGAATGTTT+AGG | - | chr3_4:42631226-42631245 | Msa0501440:intron | 20.0% |
| !!! | CTTTTTATTTTTTCATTGGA+TGG | - | chr3_4:42631277-42631296 | Msa0501440:intron | 20.0% |
| !!! | TTATTTCTACTAATTTACCA+GGG | - | chr3_4:42631963-42631982 | Msa0501440:CDS | 20.0% |
| !!! | TTTTCAAACTTCAAAATAGT+AGG | - | chr3_4:42632583-42632602 | Msa0501440:intron | 20.0% |
| !! | TTTCAAACTTCAAAATAGTA+GGG | - | chr3_4:42632584-42632603 | Msa0501440:intron | 20.0% |
| !! | ACATAAACAATTTATTTCCT+CGG | + | chr3_4:42632845-42632864 | None:intergenic | 20.0% |
| !!! | AAAAGTTTTAGAGTTATCTA+TGG | + | chr3_4:42633145-42633164 | None:intergenic | 20.0% |
| !!! | AATTTAAATTGTTTTTGTGC+TGG | - | chr3_4:42633194-42633213 | Msa0501440:intron | 20.0% |
| !! | CCATATCATATTAATTATTC+GGG | + | chr3_4:42633305-42633324 | None:intergenic | 20.0% |
| !! | CCCATATCATATTAATTATT+CGG | + | chr3_4:42633306-42633325 | None:intergenic | 20.0% |
| !! | CCGAATAATTAATATGATAT+GGG | - | chr3_4:42633303-42633322 | Msa0501440:CDS | 20.0% |
| !!! | TTTTTTGAAGAGAAACAAAA+TGG | + | chr3_4:42633431-42633450 | None:intergenic | 20.0% |
| !! | TCTTAACAAATAAAAGAAGT+TGG | - | chr3_4:42633580-42633599 | Msa0501440:intron | 20.0% |
| !! | ATGTTCTTTACTTAATCTAA+TGG | + | chr3_4:42633678-42633697 | None:intergenic | 20.0% |
| !! | ATTAGATTAAGTAAAGAACA+TGG | - | chr3_4:42633677-42633696 | Msa0501440:intron | 20.0% |
| !! | ATTTCCTTAAAATGAAAACA+CGG | - | chr3_4:42633800-42633819 | Msa0501440:CDS | 20.0% |
| !! | AAGAAGATGATTTATGAAAT+TGG | + | chr3_4:42633898-42633917 | None:intergenic | 20.0% |
| !! | AGTGATAGAATAATAAATTG+GGG | + | chr3_4:42633945-42633964 | None:intergenic | 20.0% |
| !! | GAGTGATAGAATAATAAATT+GGG | + | chr3_4:42633946-42633965 | None:intergenic | 20.0% |
| !! | TGAGTGATAGAATAATAAAT+TGG | + | chr3_4:42633947-42633966 | None:intergenic | 20.0% |
| !!! | AATATTGGTAGTATTTGTTT+TGG | - | chr3_4:42634605-42634624 | Msa0501440:intron | 20.0% |
| !! | AAACTAACAAAATAATTGGA+TGG | - | chr3_4:42634678-42634697 | Msa0501440:intron | 20.0% |
| !! | TTAATTCTTCCTAAATTAAG+AGG | - | chr3_4:42634758-42634777 | Msa0501440:intron | 20.0% |
| !!! | TCATTAGTTCAAATATTTTC+TGG | - | chr3_4:42634906-42634925 | Msa0501440:intron | 20.0% |
| !! | TCCTAAAATTAAAAGGAAAT+GGG | + | chr3_4:42635179-42635198 | None:intergenic | 20.0% |
| !! | TTCAATTGCATATAATAAAG+CGG | - | chr3_4:42635227-42635246 | Msa0501440:intron | 20.0% |
| !! | TGGAAAATCTATAAAAGAAA+AGG | + | chr3_4:42635449-42635468 | None:intergenic | 20.0% |
| !! | ATTATTCATATTTATCAAGG+TGG | + | chr3_4:42635469-42635488 | None:intergenic | 20.0% |
| !! | ACCTTGATAAATATGAATAA+TGG | - | chr3_4:42635468-42635487 | Msa0501440:intron | 20.0% |
| !! | TCCATTATTCATATTTATCA+AGG | + | chr3_4:42635472-42635491 | None:intergenic | 20.0% |
| !! | TTAGATTAAAACAGAAATTC+GGG | + | chr3_4:42635522-42635541 | None:intergenic | 20.0% |
| !!! | TTCGATCATATTAGTTATTT+TGG | - | chr3_4:42635746-42635765 | Msa0501440:intron | 20.0% |
| !! | AATTTGAAAATTCTCAATCA+AGG | + | chr3_4:42635787-42635806 | None:intergenic | 20.0% |
| !!! | TTGAAATTTTGTTAAGTTCA+AGG | - | chr3_4:42635818-42635837 | Msa0501440:intron | 20.0% |
| !! | CACTAATATATAAAAAACTG+GGG | - | chr3_4:42635886-42635905 | Msa0501440:intron | 20.0% |
| !! | TCTTATAAATGTGAATTGTT+TGG | - | chr3_4:42635943-42635962 | Msa0501440:intron | 20.0% |
| !! | AAAAAATTAGATTATGTCTC+AGG | + | chr3_4:42636073-42636092 | None:intergenic | 20.0% |
| !! | TTGACATTATCTATAACATT+TGG | + | chr3_4:42636344-42636363 | None:intergenic | 20.0% |
| !! | TCGATGAAATAAGAAAATTA+AGG | - | chr3_4:42636400-42636419 | Msa0501440:intron | 20.0% |
| !! | GAAAATTAAGGATATAGTAA+TGG | - | chr3_4:42636412-42636431 | Msa0501440:intron | 20.0% |
| !! | TTTATTGTGTTTATTTAACC+TGG | - | chr3_4:42636649-42636668 | Msa0501440:CDS | 20.0% |
| !! | TAAGTAACAAAACAAATACA+GGG | + | chr3_4:42636725-42636744 | None:intergenic | 20.0% |
| !! | ATAAGTAACAAAACAAATAC+AGG | + | chr3_4:42636726-42636745 | None:intergenic | 20.0% |
| !! | TTTTCGGAAATTCAACAAAA+TGG | + | chr3_4:42627918-42627937 | None:intergenic | 25.0% |
| !! | TGACCCATTTTGTTAAATTT+TGG | - | chr3_4:42628081-42628100 | Msa0501440:intron | 25.0% |
| !! | GACCCATTTTGTTAAATTTT+GGG | - | chr3_4:42628082-42628101 | Msa0501440:intron | 25.0% |
| ! | AAATCTGTTAATCAAGTCAT+AGG | - | chr3_4:42628336-42628355 | Msa0501440:intron | 25.0% |
| ! | AATCTGTTAATCAAGTCATA+GGG | - | chr3_4:42628337-42628356 | Msa0501440:intron | 25.0% |
| ! | AATATGGAAACATAAAGTGA+AGG | - | chr3_4:42628515-42628534 | Msa0501440:intron | 25.0% |
| ! | ATATGGAAACATAAAGTGAA+GGG | - | chr3_4:42628516-42628535 | Msa0501440:intron | 25.0% |
| !!! | TTAGATAAAGAATTTTGGAG+GGG | + | chr3_4:42628766-42628785 | None:intergenic | 25.0% |
| !! | GTTTAGATAAAGAATTTTGG+AGG | + | chr3_4:42628768-42628787 | None:intergenic | 25.0% |
| ! | ATACTATGGGACTAAATATT+TGG | - | chr3_4:42628803-42628822 | Msa0501440:intron | 25.0% |
| !!! | GATTTATATTTTTGATGTGG+TGG | - | chr3_4:42629018-42629037 | Msa0501440:intron | 25.0% |
| ! | CCTTAAATAAATAGGTTACA+CGG | - | chr3_4:42629362-42629381 | Msa0501440:CDS | 25.0% |
| ! | TTGAAAAACATCTAAATGCT+TGG | - | chr3_4:42629612-42629631 | Msa0501440:intron | 25.0% |
| ! | TTCTGTTGAATACAAATTCT+TGG | - | chr3_4:42629684-42629703 | Msa0501440:intron | 25.0% |
| !! | ATAATTATGAATATAGTGGG+TGG | - | chr3_4:42629795-42629814 | Msa0501440:intron | 25.0% |
| ! | AAGCAGAAAGATTAATGTAA+TGG | - | chr3_4:42629846-42629865 | Msa0501440:intron | 25.0% |
| ! | AGCAGAAAGATTAATGTAAT+GGG | - | chr3_4:42629847-42629866 | Msa0501440:intron | 25.0% |
| ! | GAGAGAGTTTAACTAAAATA+AGG | - | chr3_4:42630133-42630152 | Msa0501440:intron | 25.0% |
| ! | AAATAAGGAAAATTTCATGC+AGG | - | chr3_4:42630148-42630167 | Msa0501440:intron | 25.0% |
| ! | ATATCATATTTCCGTATACT+TGG | - | chr3_4:42630264-42630283 | Msa0501440:intron | 25.0% |
| ! | ACATATTCTAACCAAGTATA+CGG | + | chr3_4:42630278-42630297 | None:intergenic | 25.0% |
| ! | GAAGATAAAAAAGAGATAAC+AGG | + | chr3_4:42630301-42630320 | None:intergenic | 25.0% |
| ! | TCATTTAAATCAATGTCGAT+CGG | + | chr3_4:42630395-42630414 | None:intergenic | 25.0% |
| !!! | TTATTTTCAAGTGATTAGCT+TGG | - | chr3_4:42630846-42630865 | Msa0501440:intron | 25.0% |
| ! | ATTGACACAACAATATTGTT+AGG | - | chr3_4:42630883-42630902 | Msa0501440:intron | 25.0% |
| ! | GCATATATTTAAGGATTAAC+AGG | - | chr3_4:42631339-42631358 | Msa0501440:intron | 25.0% |
| ! | CTTAAGAAGAGTTTATAAAG+AGG | - | chr3_4:42631695-42631714 | Msa0501440:intron | 25.0% |
| !! | TTGAGTATTGTTGAAATTTG+GGG | + | chr3_4:42631766-42631785 | None:intergenic | 25.0% |
| !! | GTTGAGTATTGTTGAAATTT+GGG | + | chr3_4:42631767-42631786 | None:intergenic | 25.0% |
| !! | TGTTGAGTATTGTTGAAATT+TGG | + | chr3_4:42631768-42631787 | None:intergenic | 25.0% |
| ! | GTTTCTTTGAATTCTAAGTA+AGG | - | chr3_4:42631837-42631856 | Msa0501440:intron | 25.0% |
| !!! | CTTATTTCTACTAATTTACC+AGG | - | chr3_4:42631962-42631981 | Msa0501440:CDS | 25.0% |
| !! | ATTTTCTATCAGCAGAATAA+AGG | + | chr3_4:42632041-42632060 | None:intergenic | 25.0% |
| !! | CATACATCGTATTTCTTTTT+CGG | - | chr3_4:42632231-42632250 | Msa0501440:intron | 25.0% |
| ! | TAATGTCAATACTCTTAATC+AGG | - | chr3_4:42632288-42632307 | Msa0501440:intron | 25.0% |
| !! | ATACCATGAGTTTAAAATTG+AGG | - | chr3_4:42632499-42632518 | Msa0501440:intron | 25.0% |
| !! | AAACCTCAATTTTAAACTCA+TGG | + | chr3_4:42632505-42632524 | None:intergenic | 25.0% |
| ! | TTAATATATCAGAAAGCAGA+AGG | - | chr3_4:42632705-42632724 | Msa0501440:intron | 25.0% |
| ! | TAATATATCAGAAAGCAGAA+GGG | - | chr3_4:42632706-42632725 | Msa0501440:intron | 25.0% |
| ! | TGTGAAGATTTCATGTATAA+TGG | - | chr3_4:42632802-42632821 | Msa0501440:intron | 25.0% |
| !!! | AGATAACTCTAAAACTTTTC+TGG | - | chr3_4:42633146-42633165 | Msa0501440:intron | 25.0% |
| ! | CCCGAATAATTAATATGATA+TGG | - | chr3_4:42633302-42633321 | Msa0501440:CDS | 25.0% |
| ! | ACTAAATATACAATATGGCT+TGG | - | chr3_4:42633367-42633386 | Msa0501440:intron | 25.0% |
| ! | ACGTTAAAAAAATAGCTTCA+AGG | - | chr3_4:42633492-42633511 | Msa0501440:CDS | 25.0% |
| ! | AATATTTACTTTCCTATGGT+GGG | + | chr3_4:42633653-42633672 | None:intergenic | 25.0% |
| ! | TAATATTTACTTTCCTATGG+TGG | + | chr3_4:42633654-42633673 | None:intergenic | 25.0% |
| ! | GGTTAATATTTACTTTCCTA+TGG | + | chr3_4:42633657-42633676 | None:intergenic | 25.0% |
| ! | TGAAGTGTAATAATTACTGA+TGG | + | chr3_4:42633843-42633862 | None:intergenic | 25.0% |
| !!! | AAACATCCATTGTTGATAAT+AGG | + | chr3_4:42634165-42634184 | None:intergenic | 25.0% |
| ! | AAGGAAATAAGTCTAGAAAA+TGG | + | chr3_4:42634297-42634316 | None:intergenic | 25.0% |
| ! | ACAGAATAAGATCTCAAAAA+AGG | + | chr3_4:42634316-42634335 | None:intergenic | 25.0% |
| ! | AAGCAAAGAACATTATCTTA+TGG | + | chr3_4:42634484-42634503 | None:intergenic | 25.0% |
| ! | ATGTTCTTTGCTTAATCTAA+TGG | - | chr3_4:42634491-42634510 | Msa0501440:intron | 25.0% |
| ! | TAAACATGTCCTCTTAATTT+AGG | + | chr3_4:42634770-42634789 | None:intergenic | 25.0% |
| !! | AAGCATAATTTGTGTAACTA+TGG | - | chr3_4:42634866-42634885 | Msa0501440:intron | 25.0% |
| ! | TGGGTGATTAAAATTAAATC+AGG | + | chr3_4:42635160-42635179 | None:intergenic | 25.0% |
| !!! | ACCCATTTCCTTTTAATTTT+AGG | - | chr3_4:42635175-42635194 | Msa0501440:intron | 25.0% |
| ! | CTCCTAAAATTAAAAGGAAA+TGG | + | chr3_4:42635180-42635199 | None:intergenic | 25.0% |
| !!! | CATTTCCTTTTAATTTTAGG+AGG | - | chr3_4:42635178-42635197 | Msa0501440:intron | 25.0% |
| ! | AGATACCTCCTAAAATTAAA+AGG | + | chr3_4:42635186-42635205 | None:intergenic | 25.0% |
| !!! | GGATTGATGTTATTTTTGTA+CGG | - | chr3_4:42635422-42635441 | Msa0501440:intron | 25.0% |
| ! | AATTCACATTTATAAGATGC+AGG | + | chr3_4:42635940-42635959 | None:intergenic | 25.0% |
| ! | GTGATGAATTATCAACATAA+TGG | + | chr3_4:42636194-42636213 | None:intergenic | 25.0% |
| ! | CATTATCTATAACATTTGGT+GGG | + | chr3_4:42636340-42636359 | None:intergenic | 25.0% |
| ! | ACATTATCTATAACATTTGG+TGG | + | chr3_4:42636341-42636360 | None:intergenic | 25.0% |
| ! | CAAATAGTTTCAACTTAAGT+TGG | + | chr3_4:42636439-42636458 | None:intergenic | 25.0% |
| ! | AACAAAATGATGATCTCTAT+AGG | + | chr3_4:42636515-42636534 | None:intergenic | 25.0% |
| !! | ATTTAAAACGTATGTGAGAT+AGG | - | chr3_4:42636611-42636630 | Msa0501440:CDS | 25.0% |
| ! | TTAGTTGGGTGATGAAATTT+TGG | - | chr3_4:42628120-42628139 | Msa0501440:intron | 30.0% |
| !!! | AATTTTGGTGTTTGATTTGC+AGG | - | chr3_4:42628135-42628154 | Msa0501440:intron | 30.0% |
| ATATACATACATACATACCG+TGG | + | chr3_4:42628203-42628222 | None:intergenic | 30.0% | |
| ! | TGATGATGTTATGTTGTGTT+TGG | - | chr3_4:42628239-42628258 | Msa0501440:intron | 30.0% |
| ! | AATCTTTTGTGTTAACCCTA+TGG | + | chr3_4:42628432-42628451 | None:intergenic | 30.0% |
| AAAATACGGTTACATCAGTA+GGG | + | chr3_4:42628486-42628505 | None:intergenic | 30.0% | |
| TAAAATACGGTTACATCAGT+AGG | + | chr3_4:42628487-42628506 | None:intergenic | 30.0% | |
| TTGAGCTCTTATGATATGTT+TGG | - | chr3_4:42628572-42628591 | Msa0501440:intron | 30.0% | |
| TTTATCTAAACATACCCTTG+AGG | - | chr3_4:42628777-42628796 | Msa0501440:intron | 30.0% | |
| TTATCTAAACATACCCTTGA+GGG | - | chr3_4:42628778-42628797 | Msa0501440:intron | 30.0% | |
| !!! | GGGACTAAATATTTGGTTTT+TGG | - | chr3_4:42628810-42628829 | Msa0501440:intron | 30.0% |
| !!! | GGATTTTTTGATAACCTTCA+TGG | - | chr3_4:42628881-42628900 | Msa0501440:intron | 30.0% |
| !!! | TATTTTTGATGTGGTGGATT+TGG | - | chr3_4:42629024-42629043 | Msa0501440:intron | 30.0% |
| CAAAATTTGAGTCATGAACA+TGG | - | chr3_4:42629264-42629283 | Msa0501440:intron | 30.0% | |
| TGTGGGAATGTTGTATTATA+TGG | - | chr3_4:42629318-42629337 | Msa0501440:intron | 30.0% | |
| CCGTGTAACCTATTTATTTA+AGG | + | chr3_4:42629365-42629384 | None:intergenic | 30.0% | |
| TAAATAAATAGGTTACACGG+AGG | - | chr3_4:42629365-42629384 | Msa0501440:CDS | 30.0% | |
| AAATAAATAGGTTACACGGA+GGG | - | chr3_4:42629366-42629385 | Msa0501440:CDS | 30.0% | |
| ATTTGAACAGCGTAATAATG+AGG | - | chr3_4:42629402-42629421 | Msa0501440:intron | 30.0% | |
| AGAAATTTGAGTCATGTACA+CGG | - | chr3_4:42629484-42629503 | Msa0501440:intron | 30.0% | |
| AAAAACATCTAAATGCTTGG+AGG | - | chr3_4:42629615-42629634 | Msa0501440:intron | 30.0% | |
| AATGCATATCATACTCTGTT+AGG | + | chr3_4:42629712-42629731 | None:intergenic | 30.0% | |
| TACATGTAACCTATGATGTA+AGG | + | chr3_4:42629754-42629773 | None:intergenic | 30.0% | |
| TTACATCATAGGTTACATGT+AGG | - | chr3_4:42629753-42629772 | Msa0501440:intron | 30.0% | |
| TACATCATAGGTTACATGTA+GGG | - | chr3_4:42629754-42629773 | Msa0501440:intron | 30.0% | |
| ACTGAACACCTAATAATTTC+AGG | + | chr3_4:42629878-42629897 | None:intergenic | 30.0% | |
| TTAGGTGTTCAGTTTACTAT+AGG | - | chr3_4:42629885-42629904 | Msa0501440:intron | 30.0% | |
| TCTATTGGGTCTTAAAAGTT+AGG | - | chr3_4:42629943-42629962 | Msa0501440:intron | 30.0% | |
| !! | GACTTGGTTTGTTTCAAATA+TGG | - | chr3_4:42630019-42630038 | Msa0501440:intron | 30.0% |
| !! | TGGTTTGTTTCAAATATGGT+TGG | - | chr3_4:42630023-42630042 | Msa0501440:intron | 30.0% |
| TAAGGAAACTACCTAAGAAA+CGG | + | chr3_4:42630206-42630225 | None:intergenic | 30.0% | |
| ! | TGTGTGATTAAACGCATTTT+TGG | - | chr3_4:42630366-42630385 | Msa0501440:intron | 30.0% |
| ! | TAATTATTCTCTGGCTTCTA+TGG | - | chr3_4:42630652-42630671 | Msa0501440:intron | 30.0% |
| GATATAATATGGGGACATAA+TGG | - | chr3_4:42631028-42631047 | Msa0501440:intron | 30.0% | |
| TGAATCTGAATCAAGAAACA+AGG | + | chr3_4:42631102-42631121 | None:intergenic | 30.0% | |
| ! | GATTCAGATTCATTTTCATC+TGG | - | chr3_4:42631110-42631129 | Msa0501440:intron | 30.0% |
| TGTCAGTCATTAAATTGAGA+TGG | + | chr3_4:42631428-42631447 | None:intergenic | 30.0% | |
| ATTAGTCACATCAGTTGAAT+TGG | + | chr3_4:42631528-42631547 | None:intergenic | 30.0% | |
| GATGTGACTAATATACTTGT+TGG | - | chr3_4:42631536-42631555 | Msa0501440:intron | 30.0% | |
| AAGAAGAGTTTATAAAGAGG+AGG | - | chr3_4:42631698-42631717 | Msa0501440:intron | 30.0% | |
| AATGTAAGTGCACAAGAATT+TGG | - | chr3_4:42632075-42632094 | Msa0501440:intron | 30.0% | |
| !! | AGATTCAGTGTTTGAGTTTT+AGG | + | chr3_4:42632136-42632155 | None:intergenic | 30.0% |
| CAATACTCTTAATCAGGTAT+TGG | - | chr3_4:42632294-42632313 | Msa0501440:intron | 30.0% | |
| ! | ACTTGTCAAAGATTTGAAGT+TGG | - | chr3_4:42632342-42632361 | Msa0501440:intron | 30.0% |
| TGTCTTAGCTATCAAAATAG+TGG | + | chr3_4:42632410-42632429 | None:intergenic | 30.0% | |
| ACTCATCCTACAAATACATT+GGG | + | chr3_4:42632449-42632468 | None:intergenic | 30.0% | |
| AACTCATCCTACAAATACAT+TGG | + | chr3_4:42632450-42632469 | None:intergenic | 30.0% | |
| ! | GGGTGTTTAAAATTCCAAAA+TGG | - | chr3_4:42632661-42632680 | Msa0501440:intron | 30.0% |
| AATATATCAGAAAGCAGAAG+GGG | - | chr3_4:42632707-42632726 | Msa0501440:intron | 30.0% | |
| ! | TGTGTTTATTTGAGTGTTGT+TGG | - | chr3_4:42632967-42632986 | Msa0501440:intron | 30.0% |
| !! | ATTCAAGCTTTTTGTCACTT+GGG | - | chr3_4:42633061-42633080 | Msa0501440:intron | 30.0% |
| AATACCACTCAACAAATCAA+TGG | + | chr3_4:42633244-42633263 | None:intergenic | 30.0% | |
| ATTAATTATTCGGGCTTCAT+AGG | + | chr3_4:42633296-42633315 | None:intergenic | 30.0% | |
| GTATGATGCAACATAGATTT+AGG | - | chr3_4:42633325-42633344 | Msa0501440:CDS | 30.0% | |
| AACACAGACTTCAAACAAAT+TGG | - | chr3_4:42633546-42633565 | Msa0501440:intron | 30.0% | |
| ! | AAGTAAAGAACATGGTCTTA+TGG | - | chr3_4:42633685-42633704 | Msa0501440:intron | 30.0% |
| !! | TAATAATTACTGATGGTGGT+GGG | + | chr3_4:42633836-42633855 | None:intergenic | 30.0% |
| AGTGTAATAATTACTGATGG+TGG | + | chr3_4:42633840-42633859 | None:intergenic | 30.0% | |
| AGAAGATGAGTTATGAGAAA+AGG | + | chr3_4:42633970-42633989 | None:intergenic | 30.0% | |
| !!! | AATGAGAAATTTTGGAGTGA+TGG | - | chr3_4:42634029-42634048 | Msa0501440:intron | 30.0% |
| !!! | ATGAGAAATTTTGGAGTGAT+GGG | - | chr3_4:42634030-42634049 | Msa0501440:intron | 30.0% |
| TTCAAGCCTATTATCAACAA+TGG | - | chr3_4:42634156-42634175 | Msa0501440:intron | 30.0% | |
| CATCAAACTTAGTATCACTA+TGG | - | chr3_4:42634210-42634229 | Msa0501440:intron | 30.0% | |
| AAGATTGAACATGACAATGA+AGG | - | chr3_4:42634406-42634425 | Msa0501440:intron | 30.0% | |
| GGATAAAATTTACTTTCCCA+TGG | - | chr3_4:42634512-42634531 | Msa0501440:intron | 30.0% | |
| TAAAATTTACTTTCCCATGG+TGG | - | chr3_4:42634515-42634534 | Msa0501440:intron | 30.0% | |
| AAAATTTACTTTCCCATGGT+GGG | - | chr3_4:42634516-42634535 | Msa0501440:intron | 30.0% | |
| !!! | ATTGGTAGTATTTGTTTTGG+TGG | - | chr3_4:42634608-42634627 | Msa0501440:intron | 30.0% |
| GTACATAAACAAGATTCATG+TGG | + | chr3_4:42634823-42634842 | None:intergenic | 30.0% | |
| TTGTGTAACTATGGTGAAAA+TGG | - | chr3_4:42634875-42634894 | Msa0501440:intron | 30.0% | |
| ACTTATTAGATAACAGTACC+TGG | + | chr3_4:42635006-42635025 | None:intergenic | 30.0% | |
| AAGAGATTTGGGAATCAAAA+TGG | - | chr3_4:42635617-42635636 | Msa0501440:intron | 30.0% | |
| AGAGATTTGGGAATCAAAAT+GGG | - | chr3_4:42635618-42635637 | Msa0501440:intron | 30.0% | |
| TAATTTAGTCCCTGATATAG+TGG | + | chr3_4:42635860-42635879 | None:intergenic | 30.0% | |
| ! | GGTATTGGATAAGATTTCAA+CGG | + | chr3_4:42636052-42636071 | None:intergenic | 30.0% |
| TTAGATTATGTCTCAGGTAT+TGG | + | chr3_4:42636067-42636086 | None:intergenic | 30.0% | |
| AACAGTGTAGCACTAATTTA+TGG | - | chr3_4:42636141-42636160 | Msa0501440:intron | 30.0% | |
| TGATGAAATTGTGCAGAAAT+TGG | - | chr3_4:42636552-42636571 | Msa0501440:intron | 30.0% | |
| !! | GTTTTAAATCGTCTTCAACT+TGG | + | chr3_4:42636600-42636619 | None:intergenic | 30.0% |
| TGTGTTTATTTAACCTGGTT+TGG | - | chr3_4:42636654-42636673 | Msa0501440:CDS | 30.0% | |
| !! | TTTGGTTCTCTATATGTGAA+TGG | - | chr3_4:42636672-42636691 | Msa0501440:CDS | 30.0% |
| CAAAACAAATACAGGGTTAT+GGG | + | chr3_4:42636718-42636737 | None:intergenic | 30.0% | |
| ACAAAACAAATACAGGGTTA+TGG | + | chr3_4:42636719-42636738 | None:intergenic | 30.0% | |
| AATTGGAAAAAAGGAGATCA+TGG | + | chr3_4:42636879-42636898 | None:intergenic | 30.0% | |
| GTTATGTTGTGTTTGGATTG+TGG | - | chr3_4:42628246-42628265 | Msa0501440:intron | 35.0% | |
| TCCACTTAAGGATTCTTGTT+CGG | - | chr3_4:42628378-42628397 | Msa0501440:intron | 35.0% | |
| ! | ATTCTTGTTCGGGATTAGTA+GGG | - | chr3_4:42628389-42628408 | Msa0501440:intron | 35.0% |
| TGTTAACCCTATGGTTTCTA+GGG | + | chr3_4:42628423-42628442 | None:intergenic | 35.0% | |
| GCTCTTATGATATGTTTGGA+TGG | - | chr3_4:42628576-42628595 | Msa0501440:intron | 35.0% | |
| CTTATGATATGTTTGGATGG+AGG | - | chr3_4:42628579-42628598 | Msa0501440:intron | 35.0% | |
| ! | GGAGGGTTAAATCTATTTCT+TGG | - | chr3_4:42628612-42628631 | Msa0501440:intron | 35.0% |
| !! | ATAAAGAATTTTGGAGGGGA+GGG | + | chr3_4:42628762-42628781 | None:intergenic | 35.0% |
| ATAACCTTCATGGCCAATTT+GGG | - | chr3_4:42628891-42628910 | Msa0501440:intron | 35.0% | |
| !! | TTATTCTGAGGCTATTGCAA+TGG | - | chr3_4:42629058-42629077 | Msa0501440:intron | 35.0% |
| AGTATCATCAAGCCATTTCT+GGG | - | chr3_4:42629087-42629106 | Msa0501440:intron | 35.0% | |
| TTTATCCACAGTTTGGACTA+AGG | - | chr3_4:42629144-42629163 | Msa0501440:intron | 35.0% | |
| !!! | TGTGAGAATGTTGTTGGTTT+TGG | - | chr3_4:42629236-42629255 | Msa0501440:CDS | 35.0% |
| TCTTTACCAAATGCTATCTG+TGG | - | chr3_4:42629300-42629319 | Msa0501440:intron | 35.0% | |
| CTTTACCAAATGCTATCTGT+GGG | - | chr3_4:42629301-42629320 | Msa0501440:intron | 35.0% | |
| CAGCGTAATAATGAGGATAT+TGG | - | chr3_4:42629409-42629428 | Msa0501440:intron | 35.0% | |
| ACTTTACCAAATGCTCTTTG+TGG | - | chr3_4:42629522-42629541 | Msa0501440:intron | 35.0% | |
| CTTTACCAAATGCTCTTTGT+GGG | - | chr3_4:42629523-42629542 | Msa0501440:intron | 35.0% | |
| !! | ATATTCCCACAAAGAGCATT+TGG | + | chr3_4:42629531-42629550 | None:intergenic | 35.0% |
| ! | AAAGGCATACCTTACATCAT+AGG | - | chr3_4:42629742-42629761 | Msa0501440:intron | 35.0% |
| ACAATTGTCAAGATGAAACG+GGG | + | chr3_4:42629994-42630013 | None:intergenic | 35.0% | |
| CACAATTGTCAAGATGAAAC+GGG | + | chr3_4:42629995-42630014 | None:intergenic | 35.0% | |
| GCACAATTGTCAAGATGAAA+CGG | + | chr3_4:42629996-42630015 | None:intergenic | 35.0% | |
| GAATAGTTTCTGTAAGCACA+AGG | + | chr3_4:42630102-42630121 | None:intergenic | 35.0% | |
| TTGCAAAAGATCCGTTTCTT+AGG | - | chr3_4:42630192-42630211 | Msa0501440:intron | 35.0% | |
| TGAAATGTCTATGTCTTGTC+AGG | - | chr3_4:42630412-42630431 | Msa0501440:intron | 35.0% | |
| TCAAATGATTGTTGCTGAAG+CGG | - | chr3_4:42630454-42630473 | Msa0501440:intron | 35.0% | |
| TCTCCATCTTTCGAAATTAG+AGG | + | chr3_4:42630497-42630516 | None:intergenic | 35.0% | |
| TAGTGGGGTTAATTATTCTC+TGG | - | chr3_4:42630643-42630662 | Msa0501440:intron | 35.0% | |
| GTAATGCCAAGAAAACGATT+GGG | + | chr3_4:42630707-42630726 | None:intergenic | 35.0% | |
| TGTAATGCCAAGAAAACGAT+TGG | + | chr3_4:42630708-42630727 | None:intergenic | 35.0% | |
| TGAGTTTGCCATAAATAAGC+CGG | + | chr3_4:42630731-42630750 | None:intergenic | 35.0% | |
| GTTATCAGATGCCTTTGTAT+TGG | - | chr3_4:42630973-42630992 | Msa0501440:intron | 35.0% | |
| AATCAAAGGAAATCGCCAAT+TGG | + | chr3_4:42631054-42631073 | None:intergenic | 35.0% | |
| GAAGTCAAAGTTCATCTTCA+CGG | - | chr3_4:42631132-42631151 | Msa0501440:intron | 35.0% | |
| GAATAAAGCTCAAACCTTTC+TGG | + | chr3_4:42631161-42631180 | None:intergenic | 35.0% | |
| AAGAGTAAGTATGCAACCTA+GGG | - | chr3_4:42631300-42631319 | Msa0501440:intron | 35.0% | |
| AATTGTTATGTAGAAGCCCT+AGG | + | chr3_4:42631319-42631338 | None:intergenic | 35.0% | |
| TGGAAATTTCGCCTTTATTG+CGG | - | chr3_4:42631556-42631575 | Msa0501440:intron | 35.0% | |
| CGAACTCATTCTTACAAAAC+CGG | + | chr3_4:42631742-42631761 | None:intergenic | 35.0% | |
| !! | CGGTTTTGTAAGAATGAGTT+CGG | - | chr3_4:42631740-42631759 | Msa0501440:intron | 35.0% |
| TTGAATTCTAAGTAAGGACC+TGG | - | chr3_4:42631843-42631862 | Msa0501440:intron | 35.0% | |
| AATGTGTAAAGTGCATGCTT+CGG | - | chr3_4:42631886-42631905 | Msa0501440:intron | 35.0% | |
| GGATATTGAAAGAGAAGAAG+CGG | - | chr3_4:42632002-42632021 | Msa0501440:intron | 35.0% | |
| !! | AGGTATTGGAGCAAATACTT+GGG | - | chr3_4:42632308-42632327 | Msa0501440:intron | 35.0% |
| TGACTTCCCAATGTATTTGT+AGG | - | chr3_4:42632440-42632459 | Msa0501440:CDS | 35.0% | |
| AATTGTCTATCTACCCTTCT+GGG | + | chr3_4:42632622-42632641 | None:intergenic | 35.0% | |
| AAATTGTCTATCTACCCTTC+TGG | + | chr3_4:42632623-42632642 | None:intergenic | 35.0% | |
| !! | AGTAGAAAGTGTGTCCATTT+TGG | + | chr3_4:42632678-42632697 | None:intergenic | 35.0% |
| CTATTAACTGCAAATGTGCA+TGG | + | chr3_4:42632778-42632797 | None:intergenic | 35.0% | |
| TTCCACATAAAATGTCCTCA+CGG | + | chr3_4:42632903-42632922 | None:intergenic | 35.0% | |
| ! | GACATTTTATGTGGAATCCT+GGG | - | chr3_4:42632907-42632926 | Msa0501440:intron | 35.0% |
| ACTCAAATAAACACACACAC+GGG | + | chr3_4:42632962-42632981 | None:intergenic | 35.0% | |
| CACTCAAATAAACACACACA+CGG | + | chr3_4:42632963-42632982 | None:intergenic | 35.0% | |
| !! | TTATTTTGCCATTGGTCTAG+TGG | + | chr3_4:42632993-42633012 | None:intergenic | 35.0% |
| ! | GATTCAAGCTTTTTGTCACT+TGG | - | chr3_4:42633060-42633079 | Msa0501440:intron | 35.0% |
| !! | ATTGCCATTGATTTGTTGAG+TGG | - | chr3_4:42633237-42633256 | Msa0501440:intron | 35.0% |
| TTGAGTGGTATTGTTTAGTG+AGG | - | chr3_4:42633252-42633271 | Msa0501440:intron | 35.0% | |
| GAAACAAAATGGACCCAAAA+AGG | + | chr3_4:42633420-42633439 | None:intergenic | 35.0% | |
| AGAAGTTGGATGATTCTCTT+TGG | - | chr3_4:42633594-42633613 | Msa0501440:intron | 35.0% | |
| GAAGTTGGATGATTCTCTTT+GGG | - | chr3_4:42633595-42633614 | Msa0501440:intron | 35.0% | |
| AAGTTGGATGATTCTCTTTG+GGG | - | chr3_4:42633596-42633615 | Msa0501440:intron | 35.0% | |
| !! | TGTTGTTGTTGATGGGTTAA+TGG | + | chr3_4:42633772-42633791 | None:intergenic | 35.0% |
| ! | TTGATGCTGTTGTTGTTGAT+GGG | + | chr3_4:42633779-42633798 | None:intergenic | 35.0% |
| ! | TTTGATGCTGTTGTTGTTGA+TGG | + | chr3_4:42633780-42633799 | None:intergenic | 35.0% |
| ! | GAGACCGTGTTTTCATTTTA+AGG | + | chr3_4:42633807-42633826 | None:intergenic | 35.0% |
| !! | GTAATAATTACTGATGGTGG+TGG | + | chr3_4:42633837-42633856 | None:intergenic | 35.0% |
| ! | GAATATCTTTTCAACGTTGC+TGG | + | chr3_4:42634188-42634207 | None:intergenic | 35.0% |
| ! | GAAGAAGAGTTTTTCTGTTC+TGG | - | chr3_4:42634380-42634399 | Msa0501440:intron | 35.0% |
| ATTCATATCCAAAGAGAGGT+GGG | + | chr3_4:42634569-42634588 | None:intergenic | 35.0% | |
| CAAGATTCATATCCAAAGAG+AGG | + | chr3_4:42634573-42634592 | None:intergenic | 35.0% | |
| CTCTCTTTGGATATGAATCT+TGG | - | chr3_4:42634571-42634590 | Msa0501440:intron | 35.0% | |
| TCTTTGGATATGAATCTTGG+AGG | - | chr3_4:42634574-42634593 | Msa0501440:intron | 35.0% | |
| TTGGAGGACTTTGCAAATAT+TGG | - | chr3_4:42634590-42634609 | Msa0501440:intron | 35.0% | |
| AGCTGTGTAGTAATTAGCAT+GGG | - | chr3_4:42634701-42634720 | Msa0501440:intron | 35.0% | |
| TTTCCACTTAGCATCAAAGT+GGG | + | chr3_4:42634848-42634867 | None:intergenic | 35.0% | |
| CCTGGCAAAACTAACAAATT+GGG | + | chr3_4:42634988-42635007 | None:intergenic | 35.0% | |
| ACCTGGCAAAACTAACAAAT+TGG | + | chr3_4:42634989-42635008 | None:intergenic | 35.0% | |
| ATATCTGCAATTGCATGTCA+GGG | - | chr3_4:42635029-42635048 | Msa0501440:intron | 35.0% | |
| AAAACATGCATGTGGAAACA+AGG | + | chr3_4:42635260-42635279 | None:intergenic | 35.0% | |
| CAAATGCAAAAACATGCATG+TGG | + | chr3_4:42635268-42635287 | None:intergenic | 35.0% | |
| !! | CACATGCATGTTTTTGCATT+TGG | - | chr3_4:42635266-42635285 | Msa0501440:intron | 35.0% |
| ACATGAATTATGCTCTTCAC+AGG | - | chr3_4:42635299-42635318 | Msa0501440:CDS | 35.0% | |
| ATGACAAAATGCTCTCTACA+TGG | + | chr3_4:42635381-42635400 | None:intergenic | 35.0% | |
| TTAAAACAGAAATTCGGGAC+TGG | + | chr3_4:42635517-42635536 | None:intergenic | 35.0% | |
| !!! | TGGAGTTGAGAGTATTTTGA+TGG | - | chr3_4:42635579-42635598 | Msa0501440:intron | 35.0% |
| TTGCAACAACAGAAGAGATT+TGG | - | chr3_4:42635605-42635624 | Msa0501440:intron | 35.0% | |
| TGCAACAACAGAAGAGATTT+GGG | - | chr3_4:42635606-42635625 | Msa0501440:intron | 35.0% | |
| TTCAAGGACAAAGTTCACAA+TGG | - | chr3_4:42635834-42635853 | Msa0501440:intron | 35.0% | |
| AGAAATTGGAGAACATGCAA+TGG | - | chr3_4:42636566-42636585 | Msa0501440:intron | 35.0% | |
| CTATATGTGAATGGTGTGAA+AGG | - | chr3_4:42636681-42636700 | Msa0501440:CDS | 35.0% | |
| ATATGAAACATCATTCCTCG+CGG | - | chr3_4:42636753-42636772 | Msa0501440:five_prime_UTR | 35.0% | |
| ! | CAAGGAATGAGAACAGTTTT+AGG | + | chr3_4:42636806-42636825 | None:intergenic | 35.0% |
| AATGGATCAGTAAGAGATCA+AGG | + | chr3_4:42636824-42636843 | None:intergenic | 35.0% | |
| ACCGTTTGGATCAATGGTTA+AGG | - | chr3_4:42627718-42627737 | Msa0501440:three_prime_UTR | 40.0% | |
| CCCTTAACCATTGATCCAAA+CGG | + | chr3_4:42627722-42627741 | None:intergenic | 40.0% | |
| CCGTTTGGATCAATGGTTAA+GGG | - | chr3_4:42627719-42627738 | Msa0501440:three_prime_UTR | 40.0% | |
| ! | ATCGATGAGTTGGGATACAT+CGG | + | chr3_4:42627768-42627787 | None:intergenic | 40.0% |
| ! | TTCTAGCTGATCGATGAGTT+GGG | + | chr3_4:42627777-42627796 | None:intergenic | 40.0% |
| TTGGAAATGAGAGATCCATC+AGG | + | chr3_4:42627815-42627834 | None:intergenic | 40.0% | |
| AAGATCGTTGTAGAGAGGTT+TGG | + | chr3_4:42627834-42627853 | None:intergenic | 40.0% | |
| AGTTGAAGATCGTTGTAGAG+AGG | + | chr3_4:42627839-42627858 | None:intergenic | 40.0% | |
| ACAACGATCTTCAACTCGTA+TGG | - | chr3_4:42627843-42627862 | Msa0501440:CDS | 40.0% | |
| TAGGGAAAGACTCCGTTATT+TGG | - | chr3_4:42628174-42628193 | Msa0501440:CDS | 40.0% | |
| ATACCGTGGCTTCCAAATAA+CGG | + | chr3_4:42628189-42628208 | None:intergenic | 40.0% | |
| GTTGTGTTTGGATTGTGGAT+TGG | - | chr3_4:42628251-42628270 | Msa0501440:intron | 40.0% | |
| CCACTTAAGGATTCTTGTTC+GGG | - | chr3_4:42628379-42628398 | Msa0501440:intron | 40.0% | |
| ! | GATTCTTGTTCGGGATTAGT+AGG | - | chr3_4:42628388-42628407 | Msa0501440:intron | 40.0% |
| ! | GTTAACCCTATGGTTTCTAG+GGG | + | chr3_4:42628422-42628441 | None:intergenic | 40.0% |
| GTGTTAACCCTATGGTTTCT+AGG | + | chr3_4:42628424-42628443 | None:intergenic | 40.0% | |
| !! | GTTACATCAGTAGGGTATTG+TGG | + | chr3_4:42628478-42628497 | None:intergenic | 40.0% |
| !! | TAAAGAATTTTGGAGGGGAG+GGG | + | chr3_4:42628761-42628780 | None:intergenic | 40.0% |
| !! | GATAAAGAATTTTGGAGGGG+AGG | + | chr3_4:42628763-42628782 | None:intergenic | 40.0% |
| TACCCTTGAGGGTTATACTA+TGG | - | chr3_4:42628789-42628808 | Msa0501440:intron | 40.0% | |
| ACCCTTGAGGGTTATACTAT+GGG | - | chr3_4:42628790-42628809 | Msa0501440:intron | 40.0% | |
| TCCCATAGTATAACCCTCAA+GGG | + | chr3_4:42628794-42628813 | None:intergenic | 40.0% | |
| GTCCCAGTGTTGTCAAATAT+CGG | - | chr3_4:42628838-42628857 | Msa0501440:intron | 40.0% | |
| GATAACCTTCATGGCCAATT+TGG | - | chr3_4:42628890-42628909 | Msa0501440:intron | 40.0% | |
| TGTCACAATCCTTCCCAAAT+TGG | + | chr3_4:42628907-42628926 | None:intergenic | 40.0% | |
| CAACCAAATAGTGTTCTCGA+TGG | + | chr3_4:42628954-42628973 | None:intergenic | 40.0% | |
| GAGTATCATCAAGCCATTTC+TGG | - | chr3_4:42629086-42629105 | Msa0501440:intron | 40.0% | |
| ATCGGTGGAATTAGAGATAC+TGG | - | chr3_4:42629116-42629135 | Msa0501440:intron | 40.0% | |
| AACCAACAACATTCTCACAC+AGG | + | chr3_4:42629235-42629254 | None:intergenic | 40.0% | |
| ACATTCCCACAGATAGCATT+TGG | + | chr3_4:42629309-42629328 | None:intergenic | 40.0% | |
| GGGCGTTTCCTGAAATTATT+AGG | - | chr3_4:42629867-42629886 | Msa0501440:intron | 40.0% | |
| GGTGTTCAGTTTACTATAGG+TGG | - | chr3_4:42629888-42629907 | Msa0501440:intron | 40.0% | |
| GGGTCTTAAAAGTTAGGTGT+TGG | - | chr3_4:42629949-42629968 | Msa0501440:intron | 40.0% | |
| !! | TTGACAATTGTGCACTGACT+TGG | - | chr3_4:42630003-42630022 | Msa0501440:intron | 40.0% |
| TAGGTAGTTTCCTTAGAGTG+AGG | - | chr3_4:42630211-42630230 | Msa0501440:intron | 40.0% | |
| CTGCCTCTAATTTCGAAAGA+TGG | - | chr3_4:42630491-42630510 | Msa0501440:intron | 40.0% | |
| GCTTGGAGTGGTATAATTAG+AGG | + | chr3_4:42630615-42630634 | None:intergenic | 40.0% | |
| ! | TCGTTTTCTTGGCATTACAC+CGG | - | chr3_4:42630709-42630728 | Msa0501440:intron | 40.0% |
| !! | GCATTACACCGGCTTATTTA+TGG | - | chr3_4:42630720-42630739 | Msa0501440:intron | 40.0% |
| GCCTTTGTATTGGATGACAA+CGG | - | chr3_4:42630983-42631002 | Msa0501440:intron | 40.0% | |
| ACCGTTGTCATCCAATACAA+AGG | + | chr3_4:42630987-42631006 | None:intergenic | 40.0% | |
| GAAGAGTAAGTATGCAACCT+AGG | - | chr3_4:42631299-42631318 | Msa0501440:intron | 40.0% | |
| !! | CTTCATTGTGTTGGCTTTGA+GGG | - | chr3_4:42631638-42631657 | Msa0501440:intron | 40.0% |
| !! | TTCATTGTGTTGGCTTTGAG+GGG | - | chr3_4:42631639-42631658 | Msa0501440:intron | 40.0% |
| !! | TCTTACAAAACCGGCTTGTA+AGG | + | chr3_4:42631733-42631752 | None:intergenic | 40.0% |
| CACTTTACACATTAGTGCAC+AGG | + | chr3_4:42631879-42631898 | None:intergenic | 40.0% | |
| CTCAATTAACAACTTCACCC+TGG | + | chr3_4:42631983-42632002 | None:intergenic | 40.0% | |
| CAGGGTGAAGTTGTTAATTG+AGG | - | chr3_4:42631981-42632000 | Msa0501440:CDS | 40.0% | |
| !! | CAGGTATTGGAGCAAATACT+TGG | - | chr3_4:42632307-42632326 | Msa0501440:intron | 40.0% |
| ! | GGTATTGGAGCAAATACTTG+GGG | - | chr3_4:42632309-42632328 | Msa0501440:intron | 40.0% |
| AGGATGAGTTGCAGAAAACA+TGG | - | chr3_4:42632460-42632479 | Msa0501440:CDS | 40.0% | |
| CCACTAGGCTGTAACAATAT+TGG | + | chr3_4:42632875-42632894 | None:intergenic | 40.0% | |
| CCAATATTGTTACAGCCTAG+TGG | - | chr3_4:42632872-42632891 | Msa0501440:intron | 40.0% | |
| ATTGTTACAGCCTAGTGGTT+TGG | - | chr3_4:42632877-42632896 | Msa0501440:intron | 40.0% | |
| ! | GGACATTTTATGTGGAATCC+TGG | - | chr3_4:42632906-42632925 | Msa0501440:intron | 40.0% |
| AGAAATGTGGTAACCGGATT+CGG | + | chr3_4:42632934-42632953 | None:intergenic | 40.0% | |
| CTCAAATAAACACACACACG+GGG | + | chr3_4:42632961-42632980 | None:intergenic | 40.0% | |
| ! | AACCAAATCCTCTGCCTTTT+TGG | - | chr3_4:42633403-42633422 | Msa0501440:intron | 40.0% |
| ! | ACCAAATCCTCTGCCTTTTT+GGG | - | chr3_4:42633404-42633423 | Msa0501440:intron | 40.0% |
| ! | TTTGGGGTGGGATTTAGTAT+GGG | - | chr3_4:42633612-42633631 | Msa0501440:intron | 40.0% |
| !!! | GGATAGTTTTTTCCCACCAT+AGG | - | chr3_4:42633638-42633657 | Msa0501440:intron | 40.0% |
| !! | TGTTGATGGGTTAATGGTGA+TGG | + | chr3_4:42633766-42633785 | None:intergenic | 40.0% |
| !! | TTTGGAGTGATGGGTTTGAA+AGG | - | chr3_4:42634039-42634058 | Msa0501440:intron | 40.0% |
| TGGGTTTGAAAGGATTTCTC+AGG | - | chr3_4:42634049-42634068 | Msa0501440:intron | 40.0% | |
| TGACAATGAAGGAGAGATGA+TGG | - | chr3_4:42634417-42634436 | Msa0501440:intron | 40.0% | |
| !! | AGAGATGATGGTGGAAGATA+GGG | - | chr3_4:42634429-42634448 | Msa0501440:intron | 40.0% |
| !!! | GGATAGTTTTTTCCCACCAT+GGG | + | chr3_4:42633638-42633657 | None:intergenic | 40.0% |
| !!! | AGGATAGTTTTTTCCCACCA+TGG | + | chr3_4:42633637-42633656 | None:intergenic | 40.0% |
| AGAGAGGTGGGATTTAGTAT+GGG | + | chr3_4:42634557-42634576 | None:intergenic | 40.0% | |
| AAGAGAGGTGGGATTTAGTA+TGG | + | chr3_4:42634558-42634577 | None:intergenic | 40.0% | |
| TACTAAATCCCACCTCTCTT+TGG | - | chr3_4:42634558-42634577 | Msa0501440:intron | 40.0% | |
| GATTCATATCCAAAGAGAGG+TGG | + | chr3_4:42634570-42634589 | None:intergenic | 40.0% | |
| GAGCTGTGTAGTAATTAGCA+TGG | - | chr3_4:42634700-42634719 | Msa0501440:intron | 40.0% | |
| CTTTCCACTTAGCATCAAAG+TGG | + | chr3_4:42634849-42634868 | None:intergenic | 40.0% | |
| !!! | CCCAATTTGTTAGTTTTGCC+AGG | - | chr3_4:42634985-42635004 | Msa0501440:intron | 40.0% |
| GATATCTGCAATTGCATGTC+AGG | - | chr3_4:42635028-42635047 | Msa0501440:intron | 40.0% | |
| TTAGAATATCAGCTCCTCCA+CGG | - | chr3_4:42635054-42635073 | Msa0501440:intron | 40.0% | |
| TTCACAATGGCCACTATATC+AGG | - | chr3_4:42635847-42635866 | Msa0501440:intron | 40.0% | |
| TCACAATGGCCACTATATCA+GGG | - | chr3_4:42635848-42635867 | Msa0501440:intron | 40.0% | |
| ACAGTACCACGACATTGTAA+AGG | - | chr3_4:42636283-42636302 | Msa0501440:CDS | 40.0% | |
| TTGTCACCTTTACAATGTCG+TGG | + | chr3_4:42636292-42636311 | None:intergenic | 40.0% | |
| CACATATAGAGAACCAAACC+AGG | + | chr3_4:42636670-42636689 | None:intergenic | 40.0% | |
| ACAAATACAGGGTTATGGGA+GGG | + | chr3_4:42636714-42636733 | None:intergenic | 40.0% | |
| AACAAATACAGGGTTATGGG+AGG | + | chr3_4:42636715-42636734 | None:intergenic | 40.0% | |
| GATCCATTCTTGTGTAACCA+AGG | - | chr3_4:42636836-42636855 | Msa0501440:five_prime_UTR | 40.0% | |
| ! | AAGAGTTTTCTTCTCCACCT+TGG | + | chr3_4:42636856-42636875 | None:intergenic | 40.0% |
| !!! | TGATCCAAACGGTGTCGTTT+TGG | + | chr3_4:42627711-42627730 | None:intergenic | 45.0% |
| AACGACACCGTTTGGATCAA+TGG | - | chr3_4:42627712-42627731 | Msa0501440:three_prime_UTR | 45.0% | |
| ! | TGAGTTGGGATACATCGGTA+GGG | + | chr3_4:42627763-42627782 | None:intergenic | 45.0% |
| ! | ATGAGTTGGGATACATCGGT+AGG | + | chr3_4:42627764-42627783 | None:intergenic | 45.0% |
| ! | GTTCTAGCTGATCGATGAGT+TGG | + | chr3_4:42627778-42627797 | None:intergenic | 45.0% |
| !! | GTTTGATTTGCAGGCTAGAG+AGG | - | chr3_4:42628144-42628163 | Msa0501440:intron | 45.0% |
| AGGCTAGAGAGGAAATGTGT+AGG | - | chr3_4:42628155-42628174 | Msa0501440:intron | 45.0% | |
| GGCTAGAGAGGAAATGTGTA+GGG | - | chr3_4:42628156-42628175 | Msa0501440:intron | 45.0% | |
| ACTCCGTTATTTGGAAGCCA+CGG | - | chr3_4:42628183-42628202 | Msa0501440:CDS | 45.0% | |
| ATCAAGTCATAGGGCTCAAG+TGG | - | chr3_4:42628346-42628365 | Msa0501440:intron | 45.0% | |
| TGGTTAACGAGCTCCACTTA+AGG | - | chr3_4:42628366-42628385 | Msa0501440:intron | 45.0% | |
| CCCGAACAAGAATCCTTAAG+TGG | + | chr3_4:42628382-42628401 | None:intergenic | 45.0% | |
| GATATGTTTGGATGGAGGAG+AGG | - | chr3_4:42628584-42628603 | Msa0501440:intron | 45.0% | |
| GTCCCATAGTATAACCCTCA+AGG | + | chr3_4:42628795-42628814 | None:intergenic | 45.0% | |
| GGCCGATATTTGACAACACT+GGG | + | chr3_4:42628843-42628862 | None:intergenic | 45.0% | |
| TGGCCGATATTTGACAACAC+TGG | + | chr3_4:42628844-42628863 | None:intergenic | 45.0% | |
| GTGTTGTCAAATATCGGCCA+TGG | - | chr3_4:42628844-42628863 | Msa0501440:intron | 45.0% | |
| TTGTCAAATATCGGCCATGG+TGG | - | chr3_4:42628847-42628866 | Msa0501440:intron | 45.0% | |
| !! | GGATGGCGGAAAGCTAAAAA+TGG | + | chr3_4:42628930-42628949 | None:intergenic | 45.0% |
| ATAGTGTTCTCGATGGAGGA+TGG | + | chr3_4:42628947-42628966 | None:intergenic | 45.0% | |
| CCAAATAGTGTTCTCGATGG+AGG | + | chr3_4:42628951-42628970 | None:intergenic | 45.0% | |
| CCTCCATCGAGAACACTATT+TGG | - | chr3_4:42628948-42628967 | Msa0501440:intron | 45.0% | |
| GTCGCAGGCTATTTATTCTG+AGG | - | chr3_4:42629046-42629065 | Msa0501440:intron | 45.0% | |
| !! | TTCTGAGGCTATTGCAATGG+TGG | - | chr3_4:42629061-42629080 | Msa0501440:intron | 45.0% |
| GGTGGAATTAGAGATACTGG+CGG | - | chr3_4:42629119-42629138 | Msa0501440:intron | 45.0% | |
| GAGTTCCTTAGTCCAAACTG+TGG | + | chr3_4:42629152-42629171 | None:intergenic | 45.0% | |
| CACCTGTGTGAGAATGTTGT+TGG | - | chr3_4:42629230-42629249 | Msa0501440:CDS | 45.0% | |
| TACCTACCTGAGTGCTCTAT+TGG | - | chr3_4:42629928-42629947 | Msa0501440:intron | 45.0% | |
| ACCTACCTGAGTGCTCTATT+GGG | - | chr3_4:42629929-42629948 | Msa0501440:intron | 45.0% | |
| ! | TAAGACCCAATAGAGCACTC+AGG | + | chr3_4:42629937-42629956 | None:intergenic | 45.0% |
| AAGGATAGACCAACTCCTTC+CGG | + | chr3_4:42630083-42630102 | None:intergenic | 45.0% | |
| TTTCCTTAGAGTGAGGACTG+CGG | - | chr3_4:42630218-42630237 | Msa0501440:intron | 45.0% | |
| ACTAACAGAACTGCTTGGAG+TGG | + | chr3_4:42630627-42630646 | None:intergenic | 45.0% | |
| ACTCCAAGCAGTTCTGTTAG+TGG | - | chr3_4:42630626-42630645 | Msa0501440:intron | 45.0% | |
| CTCCAAGCAGTTCTGTTAGT+GGG | - | chr3_4:42630627-42630646 | Msa0501440:intron | 45.0% | |
| TCCAAGCAGTTCTGTTAGTG+GGG | - | chr3_4:42630628-42630647 | Msa0501440:intron | 45.0% | |
| TCTATGGATCCAGTTGAACC+TGG | - | chr3_4:42630668-42630687 | Msa0501440:intron | 45.0% | |
| ! | GGTGTTCCCAATCGTTTTCT+TGG | - | chr3_4:42630698-42630717 | Msa0501440:intron | 45.0% |
| TCAGCAAACACCGTTATCTG+TGG | - | chr3_4:42630754-42630773 | Msa0501440:intron | 45.0% | |
| ATGGGGACATAATGGCCAAT+TGG | - | chr3_4:42631036-42631055 | Msa0501440:intron | 45.0% | |
| AGGATTAACAGGCTACTACC+TGG | - | chr3_4:42631350-42631369 | Msa0501440:intron | 45.0% | |
| CAAGACAGAAGATCGAAACC+AGG | + | chr3_4:42631371-42631390 | None:intergenic | 45.0% | |
| CAAACCAAAGGCCGCAATTT+AGG | + | chr3_4:42631596-42631615 | None:intergenic | 45.0% | |
| CTAAATTGCGGCCTTTGGTT+TGG | - | chr3_4:42631594-42631613 | Msa0501440:intron | 45.0% | |
| CTGCAATGAAGCCAAACCAA+AGG | + | chr3_4:42631608-42631627 | None:intergenic | 45.0% | |
| !! | CAACACAATGAAGGTGTTGG+AGG | + | chr3_4:42631631-42631650 | None:intergenic | 45.0% |
| CTCCAACACCTTCATTGTGT+TGG | - | chr3_4:42631629-42631648 | Msa0501440:intron | 45.0% | |
| ! | AGCCAACACAATGAAGGTGT+TGG | + | chr3_4:42631634-42631653 | None:intergenic | 45.0% |
| CCTCAAAGCCAACACAATGA+AGG | + | chr3_4:42631640-42631659 | None:intergenic | 45.0% | |
| !! | CCTTCATTGTGTTGGCTTTG+AGG | - | chr3_4:42631637-42631656 | Msa0501440:intron | 45.0% |
| !! | TCATTGTGTTGGCTTTGAGG+GGG | - | chr3_4:42631640-42631659 | Msa0501440:intron | 45.0% |
| TAGTCCCACATCGGATAGAT+AGG | - | chr3_4:42631669-42631688 | Msa0501440:intron | 45.0% | |
| GAGTCCTATCTATCCGATGT+GGG | + | chr3_4:42631676-42631695 | None:intergenic | 45.0% | |
| AGAGTCCTATCTATCCGATG+TGG | + | chr3_4:42631677-42631696 | None:intergenic | 45.0% | |
| AGAGAGAGAGAGAGAATGTG+TGG | - | chr3_4:42632197-42632216 | Msa0501440:intron | 45.0% | |
| GCTGATAACACAACCCAGAA+GGG | - | chr3_4:42632606-42632625 | Msa0501440:intron | 45.0% | |
| ! | CAGAAAGCAGAAGGGGATTT+TGG | - | chr3_4:42632714-42632733 | Msa0501440:intron | 45.0% |
| AATAAACACACACACGGGGA+GGG | + | chr3_4:42632957-42632976 | None:intergenic | 45.0% | |
| AAATAAACACACACACGGGG+AGG | + | chr3_4:42632958-42632977 | None:intergenic | 45.0% | |
| ACCCAAAAAGGCAGAGGATT+TGG | + | chr3_4:42633408-42633427 | None:intergenic | 45.0% | |
| AAATGGACCCAAAAAGGCAG+AGG | + | chr3_4:42633414-42633433 | None:intergenic | 45.0% | |
| TATCATGTTGCGAGCAGAAC+TGG | + | chr3_4:42633463-42633482 | None:intergenic | 45.0% | |
| ! | TTGGATGATTCTCTTTGGGG+TGG | - | chr3_4:42633599-42633618 | Msa0501440:intron | 45.0% |
| !! | TGGATGATTCTCTTTGGGGT+GGG | - | chr3_4:42633600-42633619 | Msa0501440:intron | 45.0% |
| !! | CTTTGGGGTGGGATTTAGTA+TGG | - | chr3_4:42633611-42633630 | Msa0501440:intron | 45.0% |
| GGTGGGATTTAGTATGGGAA+AGG | - | chr3_4:42633617-42633636 | Msa0501440:intron | 45.0% | |
| !! | AATGGTGATGGAAGAGAGAG+TGG | + | chr3_4:42633754-42633773 | None:intergenic | 45.0% |
| ! | CAATGAAGGAGAGATGATGG+TGG | - | chr3_4:42634420-42634439 | Msa0501440:intron | 45.0% |
| !! | GAGAGATGATGGTGGAAGAT+AGG | - | chr3_4:42634428-42634447 | Msa0501440:intron | 45.0% |
| GGTGGGATTTAGTATGGGAA+AGG | + | chr3_4:42633617-42633636 | None:intergenic | 45.0% | |
| ACTCGTTAGTGTAAGTTCCG+TGG | + | chr3_4:42635074-42635093 | None:intergenic | 45.0% | |
| TACCTGCGCTTCATAAGATC+AGG | - | chr3_4:42635097-42635116 | Msa0501440:intron | 45.0% | |
| TACCTGATCTTATGAAGCGC+AGG | + | chr3_4:42635102-42635121 | None:intergenic | 45.0% | |
| !!! | TTTTAGGAGGTATCTCGTCG+AGG | - | chr3_4:42635191-42635210 | Msa0501440:intron | 45.0% |
| AGATTTCAACGGCCAACCTT+TGG | + | chr3_4:42636041-42636060 | None:intergenic | 45.0% | |
| ATTCATCACGTGTGTGTACC+AGG | - | chr3_4:42636205-42636224 | Msa0501440:intron | 45.0% | |
| CTTGCAATGTCGTCAAAGTG+AGG | + | chr3_4:42636263-42636282 | None:intergenic | 45.0% | |
| CCACCTTGGTTACACAAGAA+TGG | + | chr3_4:42636842-42636861 | None:intergenic | 45.0% | |
| CCATTCTTGTGTAACCAAGG+TGG | - | chr3_4:42636839-42636858 | Msa0501440:five_prime_UTR | 45.0% | |
| !!! | TAATATTTTATTTTGAATTT+TGG | - | chr3_4:42636000-42636019 | Msa0501440:intron | 5.0% |
| TCCACCAAAACGACACCGTT+TGG | - | chr3_4:42627704-42627723 | Msa0501440:three_prime_UTR | 50.0% | |
| !!! | TCCAAACGGTGTCGTTTTGG+TGG | + | chr3_4:42627708-42627727 | None:intergenic | 50.0% |
| ACCCTTCCCCTAGAAACCAT+AGG | - | chr3_4:42628413-42628432 | Msa0501440:intron | 50.0% | |
| ! | CCCTATGGTTTCTAGGGGAA+GGG | + | chr3_4:42628417-42628436 | None:intergenic | 50.0% |
| CCCTTCCCCTAGAAACCATA+GGG | - | chr3_4:42628414-42628433 | Msa0501440:intron | 50.0% | |
| ! | ACCCTATGGTTTCTAGGGGA+AGG | + | chr3_4:42628418-42628437 | None:intergenic | 50.0% |
| TTGGATGGAGGAGAGGACTT+TGG | - | chr3_4:42628591-42628610 | Msa0501440:intron | 50.0% | |
| ATGGAGGAGAGGACTTTGGA+GGG | - | chr3_4:42628595-42628614 | Msa0501440:intron | 50.0% | |
| !! | ATATCGGCCATGGTGGATTG+CGG | - | chr3_4:42628854-42628873 | Msa0501440:intron | 50.0% |
| CCTTCCCAAATTGGCCATGA+AGG | + | chr3_4:42628898-42628917 | None:intergenic | 50.0% | |
| CCTTCATGGCCAATTTGGGA+AGG | - | chr3_4:42628895-42628914 | Msa0501440:intron | 50.0% | |
| ! | GCCATTTCTGGGTCTAGCAT+CGG | - | chr3_4:42629098-42629117 | Msa0501440:intron | 50.0% |
| ACCGATGCTAGACCCAGAAA+TGG | + | chr3_4:42629102-42629121 | None:intergenic | 50.0% | |
| ! | ATTTCTGGGTCTAGCATCGG+TGG | - | chr3_4:42629101-42629120 | Msa0501440:intron | 50.0% |
| GGCGGTCTTTATCCACAGTT+TGG | - | chr3_4:42629137-42629156 | Msa0501440:intron | 50.0% | |
| TGGACTAAGGAACTCTCCTC+AGG | - | chr3_4:42629157-42629176 | Msa0501440:intron | 50.0% | |
| ! | ACCCAATAGAGCACTCAGGT+AGG | + | chr3_4:42629933-42629952 | None:intergenic | 50.0% |
| TGGAGTCTAATATGCCGACC+TGG | - | chr3_4:42630043-42630062 | Msa0501440:intron | 50.0% | |
| TGTAGGGAATACGACCAGGT+CGG | + | chr3_4:42630060-42630079 | None:intergenic | 50.0% | |
| ACCCCACTAACAGAACTGCT+TGG | + | chr3_4:42630632-42630651 | None:intergenic | 50.0% | |
| GATCCAGTTGAACCTGGAGT+TGG | - | chr3_4:42630674-42630693 | Msa0501440:intron | 50.0% | |
| CATCTTCACGGCTTCCAGAA+AGG | - | chr3_4:42631144-42631163 | Msa0501440:intron | 50.0% | |
| ! | GGGTGGATTTAGTCCCACAT+CGG | - | chr3_4:42631660-42631679 | Msa0501440:intron | 50.0% |
| !! | CAAAACCGGCTTGTAAGGTG+AGG | + | chr3_4:42631728-42631747 | None:intergenic | 50.0% |
| TGCACAGGCAAATGTAAGCC+AGG | + | chr3_4:42631864-42631883 | None:intergenic | 50.0% | |
| AAAGAGAAGAAGCGGCTCTG+AGG | - | chr3_4:42632010-42632029 | Msa0501440:intron | 50.0% | |
| ! | AAGAGAAGAAGCGGCTCTGA+GGG | - | chr3_4:42632011-42632030 | Msa0501440:intron | 50.0% |
| GTTAGCGTCAGCAAGAGAGA+TGG | + | chr3_4:42632109-42632128 | None:intergenic | 50.0% | |
| GGCTGATAACACAACCCAGA+AGG | - | chr3_4:42632605-42632624 | Msa0501440:intron | 50.0% | |
| ! | GGCCGTGAGGACATTTTATG+TGG | - | chr3_4:42632898-42632917 | Msa0501440:intron | 50.0% |
| GGAGGGAGAAATGTGGTAAC+CGG | + | chr3_4:42632940-42632959 | None:intergenic | 50.0% | |
| GTTGTTGGCCACTAGACCAA+TGG | - | chr3_4:42632982-42633001 | Msa0501440:intron | 50.0% | |
| CCACTTAGCATCAAAGTGGG+AGG | + | chr3_4:42634845-42634864 | None:intergenic | 50.0% | |
| CCTCCCACTTTGATGCTAAG+TGG | - | chr3_4:42634842-42634861 | Msa0501440:intron | 50.0% | |
| CGTTAGTGTAAGTTCCGTGG+AGG | + | chr3_4:42635071-42635090 | None:intergenic | 50.0% | |
| GAGTCTGTGTCAACTGCCAA+AGG | - | chr3_4:42636022-42636041 | Msa0501440:intron | 50.0% | |
| CTGTGTCAACTGCCAAAGGT+TGG | - | chr3_4:42636026-42636045 | Msa0501440:intron | 50.0% | |
| TACTCGTTTGCGTGAGTACC+AGG | - | chr3_4:42636229-42636248 | Msa0501440:intron | 50.0% | |
| ACTCGTTTGCGTGAGTACCA+GGG | - | chr3_4:42636230-42636249 | Msa0501440:intron | 50.0% | |
| AACTATTCGAATGCACCGCG+AGG | + | chr3_4:42636771-42636790 | None:intergenic | 50.0% | |
| GTTGGGATACATCGGTAGGG+AGG | + | chr3_4:42627760-42627779 | None:intergenic | 55.0% | |
| TCAGCTAGAACGCCACTGCT+TGG | - | chr3_4:42627787-42627806 | Msa0501440:three_prime_UTR | 55.0% | |
| ATCCATCAGGAGCCAAGCAG+TGG | + | chr3_4:42627802-42627821 | None:intergenic | 55.0% | |
| GATGGAGGAGAGGACTTTGG+AGG | - | chr3_4:42628594-42628613 | Msa0501440:intron | 55.0% | |
| !! | GAATTTTGGAGGGGAGGGGT+GGG | + | chr3_4:42628757-42628776 | None:intergenic | 55.0% |
| !! | AGAATTTTGGAGGGGAGGGG+TGG | + | chr3_4:42628758-42628777 | None:intergenic | 55.0% |
| GTGTTCTCGATGGAGGATGG+CGG | + | chr3_4:42628944-42628963 | None:intergenic | 55.0% | |
| !! | GATGTGGTGGATTTGGTCGC+AGG | - | chr3_4:42629031-42629050 | Msa0501440:intron | 55.0% |
| CCTGGTCGTATTCCCTACAC+CGG | - | chr3_4:42630061-42630080 | Msa0501440:intron | 55.0% | |
| GTCGTATTCCCTACACCGGA+AGG | - | chr3_4:42630065-42630084 | Msa0501440:intron | 55.0% | |
| TTCCCTACACCGGAAGGAGT+TGG | - | chr3_4:42630071-42630090 | Msa0501440:intron | 55.0% | |
| GACCAACTCCTTCCGGTGTA+GGG | + | chr3_4:42630076-42630095 | None:intergenic | 55.0% | |
| AGACCAACTCCTTCCGGTGT+AGG | + | chr3_4:42630077-42630096 | None:intergenic | 55.0% | |
| CATCCGCAGTCCTCACTCTA+AGG | + | chr3_4:42630224-42630243 | None:intergenic | 55.0% | |
| ! | ACTGGTGCTAGCACTGTCGA+GGG | + | chr3_4:42630567-42630586 | None:intergenic | 55.0% |
| CCACCAACTCCAGGTTCAAC+TGG | + | chr3_4:42630680-42630699 | None:intergenic | 55.0% | |
| CCAGTTGAACCTGGAGTTGG+TGG | - | chr3_4:42630677-42630696 | Msa0501440:intron | 55.0% | |
| TTGGGAACACCACCAACTCC+AGG | + | chr3_4:42630689-42630708 | None:intergenic | 55.0% | |
| TCGTATGTCTCTCGCACGTG+AGG | - | chr3_4:42630919-42630938 | Msa0501440:intron | 55.0% | |
| TCTCTCGCACGTGAGGTAGA+TGG | - | chr3_4:42630926-42630945 | Msa0501440:intron | 55.0% | |
| CTACGGGCAGACCGCAATAA+AGG | + | chr3_4:42631570-42631589 | None:intergenic | 55.0% | |
| GCCCGTAGTCGCCTAAATTG+CGG | - | chr3_4:42631582-42631601 | Msa0501440:intron | 55.0% | |
| GCCGCAATTTAGGCGACTAC+GGG | + | chr3_4:42631586-42631605 | None:intergenic | 55.0% | |
| GGCCGCAATTTAGGCGACTA+CGG | + | chr3_4:42631587-42631606 | None:intergenic | 55.0% | |
| GTCGCCTAAATTGCGGCCTT+TGG | - | chr3_4:42631589-42631608 | Msa0501440:intron | 55.0% | |
| !! | TTGTGTTGGCTTTGAGGGGG+TGG | - | chr3_4:42631643-42631662 | Msa0501440:intron | 55.0% |
| GCACTCCTCACCTTACAAGC+CGG | - | chr3_4:42631720-42631739 | Msa0501440:intron | 55.0% | |
| TGGAATCCTGGGTCCGAATC+CGG | - | chr3_4:42632918-42632937 | Msa0501440:intron | 55.0% | |
| !! | GGTGATGGAAGAGAGAGTGG+TGG | + | chr3_4:42633751-42633770 | None:intergenic | 55.0% |
| !! | TACTGATGGTGGTGGGTGAG+TGG | + | chr3_4:42633829-42633848 | None:intergenic | 55.0% |
| TCTCGTCGAGGCTACTGAAG+AGG | - | chr3_4:42635203-42635222 | Msa0501440:intron | 55.0% | |
| ACTCACGCAAACGAGTAGCC+TGG | + | chr3_4:42636226-42636245 | None:intergenic | 55.0% | |
| CAAAGTGAGGATCGACACCC+TGG | + | chr3_4:42636250-42636269 | None:intergenic | 55.0% | |
| CCGGTGTAGGGAATACGACC+AGG | + | chr3_4:42630064-42630083 | None:intergenic | 60.0% | |
| ! | CACTGGTGCTAGCACTGTCG+AGG | + | chr3_4:42630568-42630587 | None:intergenic | 60.0% |
| CTCGACAGTGCTAGCACCAG+TGG | - | chr3_4:42630566-42630585 | Msa0501440:intron | 60.0% | |
| !! | GCTTGAGTTGACCACGCCAC+TGG | + | chr3_4:42630585-42630604 | None:intergenic | 60.0% |
| ATTTCCTCGGCGTCTCGTGC+TGG | + | chr3_4:42632832-42632851 | None:intergenic | 60.0% | |
| ! | AGCCTAGTGGTTTGGCCGTG+AGG | - | chr3_4:42632885-42632904 | Msa0501440:intron | 60.0% |
| GTCCTCACGGCCAAACCACT+AGG | + | chr3_4:42632890-42632909 | None:intergenic | 60.0% | |
| TGGTAACCGGATTCGGACCC+AGG | + | chr3_4:42632927-42632946 | None:intergenic | 60.0% | |
| CACACGGGGAGGGAGAAATG+TGG | + | chr3_4:42632947-42632966 | None:intergenic | 60.0% | |
| CGCCACTGCTTGGCTCCTGA+TGG | - | chr3_4:42627797-42627816 | Msa0501440:three_prime_UTR | 65.0% | |
| !! | TCGGCCATGGTGGATTGCGG+TGG | - | chr3_4:42628857-42628876 | Msa0501440:intron | 65.0% |
| !! | GCCATGGTGGATTGCGGTGG+CGG | - | chr3_4:42628860-42628879 | Msa0501440:intron | 65.0% |
| TCCGCCACCGCAATCCACCA+TGG | + | chr3_4:42628864-42628883 | None:intergenic | 65.0% | |
| CAGTGCTAGCACCAGTGGCG+TGG | - | chr3_4:42630571-42630590 | Msa0501440:intron | 65.0% | |
| AAGACCAGCACGAGACGCCG+AGG | - | chr3_4:42632825-42632844 | Msa0501440:intron | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3_4 | gene | 42627563 | 42636901 | 42627563 | ID=Msa0501440;Name=Msa0501440 |
| chr3_4 | mRNA | 42627563 | 42636901 | 42627563 | ID=Msa0501440-mRNA-1;Parent=Msa0501440;Name=Msa0501440-mRNA-1;_AED=0.10;_eAED=0.10;_QI=168|0.92|0.85|1|0.84|0.85|14|274|423 |
| chr3_4 | exon | 42627563 | 42627896 | 42627563 | ID=Msa0501440-mRNA-1:exon:9007;Parent=Msa0501440-mRNA-1 |
| chr3_4 | exon | 42628160 | 42628237 | 42628160 | ID=Msa0501440-mRNA-1:exon:9006;Parent=Msa0501440-mRNA-1 |
| chr3_4 | exon | 42629216 | 42629267 | 42629216 | ID=Msa0501440-mRNA-1:exon:9005;Parent=Msa0501440-mRNA-1 |
| chr3_4 | exon | 42629346 | 42629414 | 42629346 | ID=Msa0501440-mRNA-1:exon:9004;Parent=Msa0501440-mRNA-1 |
| chr3_4 | exon | 42631944 | 42632002 | 42631944 | ID=Msa0501440-mRNA-1:exon:9003;Parent=Msa0501440-mRNA-1 |
| chr3_4 | exon | 42632083 | 42632154 | 42632083 | ID=Msa0501440-mRNA-1:exon:9002;Parent=Msa0501440-mRNA-1 |
| chr3_4 | exon | 42632387 | 42632480 | 42632387 | ID=Msa0501440-mRNA-1:exon:9001;Parent=Msa0501440-mRNA-1 |
| chr3_4 | exon | 42633299 | 42633347 | 42633299 | ID=Msa0501440-mRNA-1:exon:9000;Parent=Msa0501440-mRNA-1 |
| chr3_4 | exon | 42633460 | 42633559 | 42633460 | ID=Msa0501440-mRNA-1:exon:8999;Parent=Msa0501440-mRNA-1 |
| chr3_4 | exon | 42633689 | 42633912 | 42633689 | ID=Msa0501440-mRNA-1:exon:8998;Parent=Msa0501440-mRNA-1 |
| chr3_4 | exon | 42633919 | 42634030 | 42633919 | ID=Msa0501440-mRNA-1:exon:8997;Parent=Msa0501440-mRNA-1 |
| chr3_4 | exon | 42635286 | 42635411 | 42635286 | ID=Msa0501440-mRNA-1:exon:8996;Parent=Msa0501440-mRNA-1 |
| chr3_4 | exon | 42636260 | 42636307 | 42636260 | ID=Msa0501440-mRNA-1:exon:8995;Parent=Msa0501440-mRNA-1 |
| chr3_4 | exon | 42636605 | 42636901 | 42636605 | ID=Msa0501440-mRNA-1:exon:8994;Parent=Msa0501440-mRNA-1 |
| chr3_4 | five_prime_UTR | 42636734 | 42636901 | 42636734 | ID=Msa0501440-mRNA-1:five_prime_utr;Parent=Msa0501440-mRNA-1 |
| chr3_4 | CDS | 42636605 | 42636733 | 42636605 | ID=Msa0501440-mRNA-1:cds;Parent=Msa0501440-mRNA-1 |
| chr3_4 | CDS | 42636260 | 42636307 | 42636260 | ID=Msa0501440-mRNA-1:cds;Parent=Msa0501440-mRNA-1 |
| chr3_4 | CDS | 42635286 | 42635411 | 42635286 | ID=Msa0501440-mRNA-1:cds;Parent=Msa0501440-mRNA-1 |
| chr3_4 | CDS | 42633919 | 42634030 | 42633919 | ID=Msa0501440-mRNA-1:cds;Parent=Msa0501440-mRNA-1 |
| chr3_4 | CDS | 42633689 | 42633912 | 42633689 | ID=Msa0501440-mRNA-1:cds;Parent=Msa0501440-mRNA-1 |
| chr3_4 | CDS | 42633460 | 42633559 | 42633460 | ID=Msa0501440-mRNA-1:cds;Parent=Msa0501440-mRNA-1 |
| chr3_4 | CDS | 42633299 | 42633347 | 42633299 | ID=Msa0501440-mRNA-1:cds;Parent=Msa0501440-mRNA-1 |
| chr3_4 | CDS | 42632387 | 42632480 | 42632387 | ID=Msa0501440-mRNA-1:cds;Parent=Msa0501440-mRNA-1 |
| chr3_4 | CDS | 42632083 | 42632154 | 42632083 | ID=Msa0501440-mRNA-1:cds;Parent=Msa0501440-mRNA-1 |
| chr3_4 | CDS | 42631944 | 42632002 | 42631944 | ID=Msa0501440-mRNA-1:cds;Parent=Msa0501440-mRNA-1 |
| chr3_4 | CDS | 42629346 | 42629414 | 42629346 | ID=Msa0501440-mRNA-1:cds;Parent=Msa0501440-mRNA-1 |
| chr3_4 | CDS | 42629216 | 42629267 | 42629216 | ID=Msa0501440-mRNA-1:cds;Parent=Msa0501440-mRNA-1 |
| chr3_4 | CDS | 42628160 | 42628237 | 42628160 | ID=Msa0501440-mRNA-1:cds;Parent=Msa0501440-mRNA-1 |
| chr3_4 | CDS | 42627837 | 42627896 | 42627837 | ID=Msa0501440-mRNA-1:cds;Parent=Msa0501440-mRNA-1 |
| chr3_4 | three_prime_UTR | 42627563 | 42627836 | 42627563 | ID=Msa0501440-mRNA-1:three_prime_utr;Parent=Msa0501440-mRNA-1 |
| Gene Sequence |
| Protein sequence |
