Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0408380 | XP_024635934.1 | 98.353 | 425 | 4 | 2 | 1 | 423 | 1 | 424 | 0.0 | 856 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0408380 | sp|Q8GYM3|AUG4_ARATH | 72.706 | 425 | 107 | 6 | 1 | 421 | 1 | 420 | 0.0 | 575 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0408380 | G7IY17 | 98.353 | 425 | 4 | 2 | 1 | 423 | 1 | 424 | 0.0 | 856 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0000050 | Msa0408380 | 0.807869 | 4.093083e-50 | -8.615850e-47 |
| Msa0001940 | Msa0408380 | 0.802724 | 4.898476e-49 | -8.615850e-47 |
| Msa0017670 | Msa0408380 | 0.826437 | 2.713801e-54 | -8.615850e-47 |
| Msa0017950 | Msa0408380 | 0.803029 | 4.235969e-49 | -8.615850e-47 |
| Msa0025720 | Msa0408380 | 0.800698 | 1.275476e-48 | -8.615850e-47 |
| Msa0035120 | Msa0408380 | 0.800106 | 1.683880e-48 | -8.615850e-47 |
| Msa0042640 | Msa0408380 | 0.817338 | 3.473736e-52 | -8.615850e-47 |
| Msa0048510 | Msa0408380 | 0.802938 | 4.423499e-49 | -8.615850e-47 |
| Msa0077340 | Msa0408380 | 0.856267 | 3.610307e-62 | -8.615850e-47 |
| Msa0077560 | Msa0408380 | 0.829267 | 5.663577e-55 | -8.615850e-47 |
| Msa0081980 | Msa0408380 | 0.807363 | 5.242263e-50 | -8.615850e-47 |
| Msa0082020 | Msa0408380 | 0.815224 | 1.031579e-51 | -8.615850e-47 |
| Msa0089980 | Msa0408380 | 0.813327 | 2.707660e-51 | -8.615850e-47 |
| Msa0090010 | Msa0408380 | 0.811475 | 6.871073e-51 | -8.615850e-47 |
| Msa0094780 | Msa0408380 | 0.825949 | 3.545929e-54 | -8.615850e-47 |
| Msa0098040 | Msa0408380 | 0.833198 | 6.122153e-56 | -8.615850e-47 |
| Msa0106620 | Msa0408380 | 0.812137 | 4.932871e-51 | -8.615850e-47 |
| Msa0125360 | Msa0408380 | 0.826066 | 3.325871e-54 | -8.615850e-47 |
| Msa0142430 | Msa0408380 | 0.817964 | 2.509043e-52 | -8.615850e-47 |
| Msa0209140 | Msa0408380 | 0.829422 | 5.193905e-55 | -8.615850e-47 |
| Msa0221000 | Msa0408380 | 0.800531 | 1.379683e-48 | -8.615850e-47 |
| Msa0225480 | Msa0408380 | 0.816396 | 5.650594e-52 | -8.615850e-47 |
| Msa0234090 | Msa0408380 | 0.821584 | 3.736830e-53 | -8.615850e-47 |
| Msa0237210 | Msa0408380 | 0.828007 | 1.141907e-54 | -8.615850e-47 |
| Msa0385830 | Msa0408380 | 0.821904 | 3.150911e-53 | -8.615850e-47 |
| Msa0386810 | Msa0408380 | 0.804459 | 2.138511e-49 | -8.615850e-47 |
| Msa0408360 | Msa0408380 | 0.863687 | 2.083546e-64 | -8.615850e-47 |
| Msa0408380 | Msa0412790 | 0.858531 | 7.729765e-63 | -8.615850e-47 |
| Msa0408380 | Msa0424160 | 0.807302 | 5.400624e-50 | -8.615850e-47 |
| Msa0408380 | Msa0450400 | -0.800512 | 1.392131e-48 | -8.615850e-47 |
| Msa0408380 | Msa0457560 | 0.824771 | 6.738038e-54 | -8.615850e-47 |
| Msa0408380 | Msa0462840 | 0.802560 | 5.293866e-49 | -8.615850e-47 |
| Msa0408380 | Msa0481890 | 0.801678 | 8.039317e-49 | -8.615850e-47 |
| Msa0408380 | Msa0483100 | 0.809926 | 1.486506e-50 | -8.615850e-47 |
| Msa0408380 | Msa0501440 | 0.844642 | 6.662214e-59 | -8.615850e-47 |
| Msa0408380 | Msa0513970 | 0.803424 | 3.509765e-49 | -8.615850e-47 |
| Msa0408380 | Msa0519760 | 0.804338 | 2.266250e-49 | -8.615850e-47 |
| Msa0408380 | Msa0519840 | 0.800570 | 1.354788e-48 | -8.615850e-47 |
| Msa0408380 | Msa0529030 | 0.831697 | 1.441331e-55 | -8.615850e-47 |
| Msa0408380 | Msa0534720 | 0.819701 | 1.011523e-52 | -8.615850e-47 |
| Msa0408380 | Msa0543560 | 0.843675 | 1.211246e-58 | -8.615850e-47 |
| Msa0408380 | Msa0581470 | 0.802175 | 6.353639e-49 | -8.615850e-47 |
| Msa0408380 | Msa0583360 | -0.834032 | 3.788251e-56 | -8.615850e-47 |
| Msa0408380 | Msa0599420 | 0.834507 | 2.880267e-56 | -8.615850e-47 |
| Msa0408380 | Msa0608700 | 0.808661 | 2.775474e-50 | -8.615850e-47 |
| Msa0408380 | Msa0624900 | 0.841897 | 3.596327e-58 | -8.615850e-47 |
| Msa0408380 | Msa0626270 | 0.807705 | 4.437018e-50 | -8.615850e-47 |
| Msa0408380 | Msa0626460 | 0.819628 | 1.051126e-52 | -8.615850e-47 |
| Msa0408380 | Msa0632420 | 0.811585 | 6.504044e-51 | -8.615850e-47 |
| Msa0408380 | Msa0649200 | 0.820148 | 7.992990e-53 | -8.615850e-47 |
| Msa0408380 | Msa0652770 | 0.815373 | 9.555273e-52 | -8.615850e-47 |
| Msa0408380 | Msa0664540 | 0.800990 | 1.111759e-48 | -8.615850e-47 |
| Msa0408380 | Msa0674480 | 0.816090 | 6.614839e-52 | -8.615850e-47 |
| Msa0408380 | Msa0674560 | 0.817356 | 3.441079e-52 | -8.615850e-47 |
| Msa0408380 | Msa0693330 | 0.812934 | 3.302614e-51 | -8.615850e-47 |
| Msa0408380 | Msa0693340 | -0.847531 | 1.090173e-59 | -8.615850e-47 |
| Msa0408380 | Msa0702720 | 0.827289 | 1.698363e-54 | -8.615850e-47 |
| Msa0408380 | Msa0703950 | 0.824902 | 6.274239e-54 | -8.615850e-47 |
| Msa0408380 | Msa0709440 | 0.804574 | 2.023359e-49 | -8.615850e-47 |
| Msa0408380 | Msa0734250 | 0.828556 | 8.420437e-55 | -8.615850e-47 |
| Msa0408380 | Msa0754430 | 0.807367 | 5.233416e-50 | -8.615850e-47 |
| Msa0408380 | Msa0792370 | 0.813582 | 2.379609e-51 | -8.615850e-47 |
| Msa0408380 | Msa0795750 | 0.834681 | 2.604156e-56 | -8.615850e-47 |
| Msa0408380 | Msa0815970 | 0.814654 | 1.380257e-51 | -8.615850e-47 |
| Msa0408380 | Msa0833530 | 0.857844 | 1.237631e-62 | -8.615850e-47 |
| Msa0408380 | Msa0855870 | 0.816988 | 4.162801e-52 | -8.615850e-47 |
| Msa0408380 | Msa0878280 | 0.819252 | 1.280469e-52 | -8.615850e-47 |
| Msa0408380 | Msa0921000 | 0.829953 | 3.857339e-55 | -8.615850e-47 |
| Msa0408380 | Msa0934140 | 0.818257 | 2.154119e-52 | -8.615850e-47 |
| Msa0408380 | Msa0945190 | 0.816755 | 4.695472e-52 | -8.615850e-47 |
| Msa0408380 | Msa0959520 | 0.825994 | 3.459005e-54 | -8.615850e-47 |
| Msa0408380 | Msa0971650 | 0.807552 | 4.780818e-50 | -8.615850e-47 |
| Msa0408380 | Msa1002350 | 0.819518 | 1.113764e-52 | -8.615850e-47 |
| Msa0408380 | Msa1034860 | 0.819712 | 1.005419e-52 | -8.615850e-47 |
| Msa0408380 | Msa1072940 | 0.807933 | 3.968481e-50 | -8.615850e-47 |
| Msa0408380 | Msa1074220 | 0.802658 | 5.053407e-49 | -8.615850e-47 |
| Msa0408380 | Msa1074900 | 0.818217 | 2.199957e-52 | -8.615850e-47 |
| Msa0408380 | Msa1089450 | 0.824298 | 8.707317e-54 | -8.615850e-47 |
| Msa0408380 | Msa1111380 | 0.822025 | 2.954137e-53 | -8.615850e-47 |
| Msa0408380 | Msa1130060 | 0.804689 | 1.914625e-49 | -8.615850e-47 |
| Msa0408380 | Msa1133680 | 0.804507 | 2.089341e-49 | -8.615850e-47 |
| Msa0408380 | Msa1155170 | -0.808147 | 3.573173e-50 | -8.615850e-47 |
| Msa0408380 | Msa1160920 | 0.821861 | 3.223102e-53 | -8.615850e-47 |
| Msa0408380 | Msa1161480 | 0.802652 | 5.068938e-49 | -8.615850e-47 |
| Msa0408380 | Msa1165090 | 0.831971 | 1.233661e-55 | -8.615850e-47 |
| Msa0408380 | Msa1171290 | 0.806733 | 7.126590e-50 | -8.615850e-47 |
| Msa0408380 | Msa1184890 | 0.802153 | 6.421900e-49 | -8.615850e-47 |
| Msa0408380 | Msa1190180 | 0.822493 | 2.299580e-53 | -8.615850e-47 |
| Msa0408380 | Msa1207330 | 0.837433 | 5.213604e-57 | -8.615850e-47 |
| Msa0408380 | Msa1225860 | -0.836204 | 1.073394e-56 | -8.615850e-47 |
| Msa0408380 | Msa1258000 | 0.804270 | 2.341386e-49 | -8.615850e-47 |
| Msa0408380 | Msa1320670 | 0.803663 | 3.130928e-49 | -8.615850e-47 |
| Msa0408380 | Msa1327870 | 0.804237 | 2.378435e-49 | -8.615850e-47 |
| Msa0408380 | Msa1331300 | 0.804415 | 2.184237e-49 | -8.615850e-47 |
| Msa0408380 | Msa1340200 | 0.847792 | 9.243955e-60 | -8.615850e-47 |
| Msa0408380 | Msa1341840 | 0.843078 | 1.748121e-58 | -8.615850e-47 |
| Msa0408380 | Msa1391500 | 0.816936 | 4.277170e-52 | -8.615850e-47 |
| Msa0408380 | Msa1398810 | 0.824435 | 8.083501e-54 | -8.615850e-47 |
| Msa0408380 | Msa1401670 | 0.810709 | 1.007424e-50 | -8.615850e-47 |
| Msa0408380 | Msa1403710 | 0.812766 | 3.593337e-51 | -8.615850e-47 |
| Msa0408380 | Msa1405460 | 0.834175 | 3.489886e-56 | -8.615850e-47 |
| Msa0408380 | Msa1407840 | 0.826520 | 2.593875e-54 | -8.615850e-47 |
| Msa0408380 | Msa1412000 | 0.823469 | 1.361987e-53 | -8.615850e-47 |
| Msa0408380 | Msa1417380 | 0.802281 | 6.042566e-49 | -8.615850e-47 |
| Msa0408380 | Msa1434220 | 0.819598 | 1.067958e-52 | -8.615850e-47 |
| Msa0408380 | Msa1437810 | 0.818112 | 2.323779e-52 | -8.615850e-47 |
| Msa0408380 | Msa1461370 | 0.822399 | 2.419102e-53 | -8.615850e-47 |
| Msa0408380 | Msa1464090 | 0.850944 | 1.223570e-60 | -8.615850e-47 |
| Msa0240900 | Msa0408380 | 0.833715 | 4.548101e-56 | -8.615850e-47 |
| Msa0241830 | Msa0408380 | 0.803421 | 3.514049e-49 | -8.615850e-47 |
| Msa0263230 | Msa0408380 | 0.837235 | 5.859455e-57 | -8.615850e-47 |
| Msa0269210 | Msa0408380 | 0.801169 | 1.021956e-48 | -8.615850e-47 |
| Msa0274980 | Msa0408380 | 0.808760 | 2.643476e-50 | -8.615850e-47 |
| Msa0279850 | Msa0408380 | 0.812783 | 3.563800e-51 | -8.615850e-47 |
| Msa0281470 | Msa0408380 | 0.811283 | 7.565916e-51 | -8.615850e-47 |
| Msa0288620 | Msa0408380 | 0.842363 | 2.706160e-58 | -8.615850e-47 |
| Msa0300840 | Msa0408380 | 0.812224 | 4.722169e-51 | -8.615850e-47 |
| Msa0304570 | Msa0408380 | 0.803381 | 3.582270e-49 | -8.615850e-47 |
| Msa0307270 | Msa0408380 | 0.825406 | 4.768977e-54 | -8.615850e-47 |
| Msa0307670 | Msa0408380 | 0.819451 | 1.153513e-52 | -8.615850e-47 |
| Msa0313900 | Msa0408380 | 0.803471 | 3.430863e-49 | -8.615850e-47 |
| Msa0315690 | Msa0408380 | 0.830853 | 2.323425e-55 | -8.615850e-47 |
| Msa0317970 | Msa0408380 | 0.825670 | 4.131241e-54 | -8.615850e-47 |
| Msa0319920 | Msa0408380 | 0.816264 | 6.048898e-52 | -8.615850e-47 |
| Msa0322900 | Msa0408380 | 0.805159 | 1.526989e-49 | -8.615850e-47 |
| Msa0323260 | Msa0408380 | 0.803561 | 3.287206e-49 | -8.615850e-47 |
| Msa0330520 | Msa0408380 | 0.814113 | 1.817828e-51 | -8.615850e-47 |
| Msa0338340 | Msa0408380 | 0.817195 | 3.740810e-52 | -8.615850e-47 |
| Msa0361910 | Msa0408380 | 0.826478 | 2.654125e-54 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0408380 | MtrunA17_Chr3g0099041 | 98.353 | 425 | 4 | 2 | 1 | 423 | 1 | 424 | 0.0 | 856 |
| Msa0408380 | MtrunA17_Chr5g0421171 | 96.604 | 265 | 6 | 2 | 99 | 361 | 4 | 267 | 0.0 | 513 |
| Msa0408380 | MtrunA17_Chr5g0421161 | 97.059 | 102 | 3 | 0 | 1 | 102 | 1 | 102 | 7.75e-68 | 211 |
| Msa0408380 | MtrunA17_Chr5g0421181 | 97.778 | 45 | 1 | 0 | 379 | 423 | 6 | 50 | 1.41e-24 | 95.5 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0408380 | AT1G50710.1 | 72.706 | 425 | 107 | 6 | 1 | 421 | 1 | 420 | 0.0 | 575 |
Find 118 sgRNAs with CRISPR-Local
Find 550 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GCATTACACCGGCTTATTTA+TGG | 0.152340 | 3_2:-48178687 | Msa0408380:CDS |
| GAATAAAGCTCAAACCTTTC+TGG | 0.169212 | 3_2:+48178249 | None:intergenic |
| TAATTATTCTCTGGCTTCTA+TGG | 0.217710 | 3_2:-48178755 | Msa0408380:CDS |
| GAGTATCATCAAGCCATTTC+TGG | 0.233393 | 3_2:-48180321 | Msa0408380:CDS |
| TAGGGAAAGACTCCGTTATT+TGG | 0.248087 | 3_2:-48181233 | Msa0408380:CDS |
| TCTCCATCTTTCGAAATTAG+AGG | 0.303118 | 3_2:+48178913 | None:intergenic |
| GGTGCTTATTTAACCTGGTT+TGG | 0.341628 | 3_2:-48173601 | Msa0408380:three_prime_UTR |
| GTTATCAGATGCCTTTGTAT+TGG | 0.344942 | 3_2:-48178434 | Msa0408380:CDS |
| TGATCCAAACGGTGTCGTTT+TGG | 0.346848 | 3_2:+48181699 | None:intergenic |
| AACGACACCGTTTGGATCAA+TGG | 0.355173 | 3_2:-48181695 | Msa0408380:exon |
| GAAAGAATCATTTATTTGTT+TGG | 0.366472 | 3_2:+48181815 | None:intergenic |
| TGAAGGTAGTATACGGGAAT+TGG | 0.371404 | 3_2:+48173362 | None:intergenic |
| ACAAAACAAATACAGGGTTA+TGG | 0.378636 | 3_2:+48173539 | None:intergenic |
| AAGATCGTTGTAAAGAGGTT+TGG | 0.379529 | 3_2:+48181576 | None:intergenic |
| CAAAACAAATACAGGGTTAT+GGG | 0.380984 | 3_2:+48173540 | None:intergenic |
| GGCGGTCTTTATCCACAGTT+TGG | 0.385184 | 3_2:-48180270 | Msa0408380:CDS |
| TACTCGTTTGCGTGAGTACC+AGG | 0.386654 | 3_2:-48174026 | Msa0408380:CDS |
| CAGGTATTGGAGCAAATACT+TGG | 0.390965 | 3_2:-48176965 | Msa0408380:CDS |
| CCACCAACTCCAGGTTCAAC+TGG | 0.397333 | 3_2:+48178730 | None:intergenic |
| ATTTATTTGTTTGGTAGTAA+TGG | 0.399455 | 3_2:+48181824 | None:intergenic |
| ATCGGTGGAATTAGAGATAC+TGG | 0.399514 | 3_2:-48180291 | Msa0408380:CDS |
| ATTTAAAACGTATGTGAGAT+AGG | 0.403955 | 3_2:-48173644 | Msa0408380:exon |
| TCCACCAAAACGACACCGTT+TGG | 0.406521 | 3_2:-48181703 | Msa0408380:five_prime_UTR |
| ATAAGTAACAAAACAAATAC+AGG | 0.411865 | 3_2:+48173532 | None:intergenic |
| GCTTGGAGTGGTATAATTAG+AGG | 0.417042 | 3_2:+48178795 | None:intergenic |
| TAGTGGGGTTAATTATTCTC+TGG | 0.419337 | 3_2:-48178764 | Msa0408380:CDS |
| TTTGGTTCTCTATATGTGAA+TGG | 0.426874 | 3_2:-48173583 | Msa0408380:three_prime_UTR |
| CCGTTTGGATCAATGGTTAA+GGG | 0.431161 | 3_2:-48181688 | Msa0408380:exon |
| ACCGTTTGGATCAATGGTTA+AGG | 0.444465 | 3_2:-48181689 | Msa0408380:exon |
| ATACCATGAGTTTAAAATTG+AGG | 0.446501 | 3_2:-48176773 | Msa0408380:intron |
| CAGGGTGAAGTTGTTAATTG+AGG | 0.450010 | 3_2:-48177305 | Msa0408380:CDS |
| CCACCTTGGTTACACAAGAA+TGG | 0.450622 | 3_2:+48173416 | None:intergenic |
| TTTATCCACAGTTTGGACTA+AGG | 0.454943 | 3_2:-48180263 | Msa0408380:CDS |
| TGGACTAAGGAACTCTCCTC+AGG | 0.458330 | 3_2:-48180250 | Msa0408380:intron |
| AGTATCATCAAGCCATTTCT+GGG | 0.466636 | 3_2:-48180320 | Msa0408380:CDS |
| CGCCACTGCTTGGCTCCTGA+TGG | 0.469158 | 3_2:-48181610 | Msa0408380:CDS |
| CATCTTCACGGCTTCCAGAA+AGG | 0.471098 | 3_2:-48178263 | Msa0408380:intron |
| CTCCAAGCAGTTCTGTTAGT+GGG | 0.475426 | 3_2:-48178780 | Msa0408380:CDS |
| GTTCTAGCTGATCGATGAGT+TGG | 0.475893 | 3_2:+48181632 | None:intergenic |
| ACTTGTCAAAGATTTGAAGT+TGG | 0.480782 | 3_2:-48176930 | Msa0408380:CDS |
| TATAATTATACCACAGATAA+CGG | 0.491692 | 3_2:+48178643 | None:intergenic |
| AGTTGAAGATCGTTGTAAAG+AGG | 0.492381 | 3_2:+48181571 | None:intergenic |
| CCAGTTGAACCTGGAGTTGG+TGG | 0.495469 | 3_2:-48178730 | Msa0408380:CDS |
| CTGCCTCTAATTTCGAAAGA+TGG | 0.495699 | 3_2:-48178916 | Msa0408380:CDS |
| ACCGATGCTAGACCCAGAAA+TGG | 0.499362 | 3_2:+48180308 | None:intergenic |
| TCTATGGATCCAGTTGAACC+TGG | 0.503762 | 3_2:-48178739 | Msa0408380:CDS |
| TTCTAGCTGATCGATGAGTT+GGG | 0.504370 | 3_2:+48181633 | None:intergenic |
| TGTAATGCCAAGAAAACGAT+TGG | 0.504419 | 3_2:+48178702 | None:intergenic |
| TCAAATGATTGTTGCTGAAG+CGG | 0.505178 | 3_2:-48178953 | Msa0408380:CDS |
| AATGGATCAGTAAGAGATCA+AGG | 0.506323 | 3_2:+48173434 | None:intergenic |
| GAAGTCAAAGTTCATCTTCA+CGG | 0.506659 | 3_2:-48178275 | Msa0408380:CDS |
| TCTCTCGCACGTGAGGTAGA+TGG | 0.509863 | 3_2:-48178481 | Msa0408380:CDS |
| TACCTGCGCTTCATAAGATC+AGG | 0.515407 | 3_2:-48175139 | Msa0408380:intron |
| GTTGCAGGCTATTTATTCTG+AGG | 0.515757 | 3_2:-48180361 | Msa0408380:intron |
| CCCTTAACCATTGATCCAAA+CGG | 0.519926 | 3_2:+48181688 | None:intergenic |
| GGCTAGAGAGGAAATGTGTA+GGG | 0.523153 | 3_2:-48181251 | Msa0408380:CDS |
| AAGAGAAGAAGCGGCTCTGA+GGG | 0.532964 | 3_2:-48177275 | Msa0408380:CDS |
| TTTATGGTGCTTATTTAACC+TGG | 0.537334 | 3_2:-48173606 | Msa0408380:three_prime_UTR |
| TCAGCTAGAACGCCACTGCT+TGG | 0.539293 | 3_2:-48181620 | Msa0408380:CDS |
| TTCTGAGGCTATTGCAATGG+TGG | 0.540621 | 3_2:-48180346 | Msa0408380:CDS |
| TTATTCTGAGGCTATTGCAA+TGG | 0.542083 | 3_2:-48180349 | Msa0408380:CDS |
| GTTTGATTTGCAGGCTAGAG+AGG | 0.544445 | 3_2:-48181263 | Msa0408380:intron |
| CACTGGTGCTAGCACTGTCG+AGG | 0.547265 | 3_2:+48178842 | None:intergenic |
| AGGTATTGGAGCAAATACTT+GGG | 0.548782 | 3_2:-48176964 | Msa0408380:CDS |
| ACTCCAAGCAGTTCTGTTAG+TGG | 0.551406 | 3_2:-48178781 | Msa0408380:CDS |
| GCCATTTCTGGGTCTAGCAT+CGG | 0.553047 | 3_2:-48180309 | Msa0408380:CDS |
| CTCGACAGTGCTAGCACCAG+TGG | 0.557774 | 3_2:-48178841 | Msa0408380:CDS |
| ATACCGTGGCTTCCAAATAA+CGG | 0.567584 | 3_2:+48181221 | None:intergenic |
| ATGAGTTGGGATACATCGGT+AGG | 0.568392 | 3_2:+48181646 | None:intergenic |
| TTGGGAACACCACCAACTCC+AGG | 0.569515 | 3_2:+48178721 | None:intergenic |
| ACCCCACTAACAGAACTGCT+TGG | 0.570315 | 3_2:+48178778 | None:intergenic |
| ATCCATCAGGAGCCAAGCAG+TGG | 0.576632 | 3_2:+48181608 | None:intergenic |
| GCTTGAGTTGACCACGCCAC+TGG | 0.577578 | 3_2:+48178825 | None:intergenic |
| TACCTGATCTTATGAAGCGC+AGG | 0.580965 | 3_2:+48175137 | None:intergenic |
| AGGCTAGAGAGGAAATGTGT+AGG | 0.581468 | 3_2:-48181252 | Msa0408380:CDS |
| GTAATGCCAAGAAAACGATT+GGG | 0.585136 | 3_2:+48178703 | None:intergenic |
| TGAGTTTGCCATAAATAAGC+CGG | 0.587858 | 3_2:+48178679 | None:intergenic |
| TTGTCACCTTTACAATGTCG+TGG | 0.587951 | 3_2:+48173966 | None:intergenic |
| TTGGAAATGAGAGATCCATC+AGG | 0.592812 | 3_2:+48181595 | None:intergenic |
| TCGTATGTCTCTCGCACGTG+AGG | 0.595105 | 3_2:-48178488 | Msa0408380:CDS |
| ACAGTACCACGACATTGTAA+AGG | 0.596583 | 3_2:-48173972 | Msa0408380:intron |
| TCCAAGCAGTTCTGTTAGTG+GGG | 0.599317 | 3_2:-48178779 | Msa0408380:CDS |
| GGTATTGGAGCAAATACTTG+GGG | 0.603674 | 3_2:-48176963 | Msa0408380:CDS |
| CTATATGTGAATGGTGTGAA+AGG | 0.609204 | 3_2:-48173574 | Msa0408380:three_prime_UTR |
| CAAAGTGAGGATCGACACCC+TGG | 0.609515 | 3_2:+48174008 | None:intergenic |
| AGGATGAGTTGCAGAAAACA+TGG | 0.610322 | 3_2:-48176812 | Msa0408380:CDS |
| AACAAATACAGGGTTATGGG+AGG | 0.614328 | 3_2:+48173543 | None:intergenic |
| CAGTGCTAGCACCAGTGGCG+TGG | 0.616239 | 3_2:-48178836 | Msa0408380:CDS |
| CACATATAGAGAACCAAACC+AGG | 0.617351 | 3_2:+48173588 | None:intergenic |
| ATTTCTGGGTCTAGCATCGG+TGG | 0.619214 | 3_2:-48180306 | Msa0408380:CDS |
| TCTCGTCGAGGCTACTGAAG+AGG | 0.620383 | 3_2:-48175033 | Msa0408380:CDS |
| ATCGATGAGTTGGGATACAT+CGG | 0.620438 | 3_2:+48181642 | None:intergenic |
| GGATATTGAAAGAGAAGAAG+CGG | 0.620795 | 3_2:-48177284 | Msa0408380:CDS |
| ACTCCGTTATTTGGAAGCCA+CGG | 0.621535 | 3_2:-48181224 | Msa0408380:intron |
| GATCCAGTTGAACCTGGAGT+TGG | 0.621670 | 3_2:-48178733 | Msa0408380:CDS |
| TTCGATTGCATATAATAAAG+CGG | 0.626090 | 3_2:-48175009 | Msa0408380:intron |
| TTAGAATATCAGCTCCTCCA+CGG | 0.627931 | 3_2:-48175182 | Msa0408380:CDS |
| AAAGAGAAGAAGCGGCTCTG+AGG | 0.629168 | 3_2:-48177276 | Msa0408380:CDS |
| ACAAATACAGGGTTATGGGA+GGG | 0.634943 | 3_2:+48173544 | None:intergenic |
| CTTGCAATGTCGTCAAAGTG+AGG | 0.637558 | 3_2:+48173995 | None:intergenic |
| ACTCGTTTGCGTGAGTACCA+GGG | 0.639453 | 3_2:-48174025 | Msa0408380:CDS |
| TGAGTTGGGATACATCGGTA+GGG | 0.640066 | 3_2:+48181647 | None:intergenic |
| GATCCATTCTTGTGTAACCA+AGG | 0.641001 | 3_2:-48173419 | Msa0408380:three_prime_UTR |
| ACCGTTGTCATCCAATACAA+AGG | 0.646327 | 3_2:+48178423 | None:intergenic |
| ACTCGTTAGTGTAAGTTCCG+TGG | 0.648265 | 3_2:+48175165 | None:intergenic |
| ACTGGTGCTAGCACTGTCGA+GGG | 0.650792 | 3_2:+48178843 | None:intergenic |
| AGAAATTGGAGAACATGCAA+TGG | 0.652906 | 3_2:-48173689 | Msa0408380:CDS |
| TCAGCAAACACCGTTATCTG+TGG | 0.654183 | 3_2:-48178653 | Msa0408380:intron |
| GCCTTTGTATTGGATGACAA+CGG | 0.654509 | 3_2:-48178424 | Msa0408380:intron |
| GTTGGGATACATCGGTAGGG+AGG | 0.657190 | 3_2:+48181650 | None:intergenic |
| AACTATTCGAATGCACCGCG+AGG | 0.658577 | 3_2:+48173487 | None:intergenic |
| CCATTCTTGTGTAACCAAGG+TGG | 0.680054 | 3_2:-48173416 | Msa0408380:three_prime_UTR |
| ACTAACAGAACTGCTTGGAG+TGG | 0.681550 | 3_2:+48178783 | None:intergenic |
| CGTTAGTGTAAGTTCCGTGG+AGG | 0.686226 | 3_2:+48175168 | None:intergenic |
| GAGTTCCTTAGTCCAAACTG+TGG | 0.687187 | 3_2:+48180258 | None:intergenic |
| TAAGTAACAAAACAAATACA+GGG | 0.707681 | 3_2:+48173533 | None:intergenic |
| ATATGAAACATCATTCCTCG+CGG | 0.750428 | 3_2:-48173502 | Msa0408380:three_prime_UTR |
| GGTGGAATTAGAGATACTGG+CGG | 0.755878 | 3_2:-48180288 | Msa0408380:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TTTTACTTTTAATTTTTCAT+AGG | - | chr3_2:48178588-48178607 | Msa0408380:intron | 10.0% |
| !!! | TTTACTTTTAATTTTTCATA+GGG | - | chr3_2:48178589-48178608 | Msa0408380:intron | 10.0% |
| !! | ATTTATATTATATGTTAGTT+TGG | - | chr3_2:48178692-48178711 | Msa0408380:CDS | 10.0% |
| !!! | TTTATATTATATGTTAGTTT+GGG | - | chr3_2:48178693-48178712 | Msa0408380:CDS | 10.0% |
| !!! | ATAGTGAAATTTTAATAATA+TGG | - | chr3_2:48179053-48179072 | Msa0408380:intron | 10.0% |
| !! | TTAAAACTAAATATACAATA+TGG | - | chr3_2:48179310-48179329 | Msa0408380:intron | 10.0% |
| !!! | TTTGAAATATTAATGATTTT+AGG | + | chr3_2:48180683-48180702 | None:intergenic | 10.0% |
| !!! | TTGAAATAATTTTTAGAATA+TGG | - | chr3_2:48181062-48181081 | Msa0408380:intron | 10.0% |
| !! | TAAAAAGTTTGAATTAAGTA+AGG | + | chr3_2:48173704-48173723 | None:intergenic | 15.0% |
| !! | AATTGAATAAAATTCGAAAA+TGG | - | chr3_2:48173835-48173854 | Msa0408380:intron | 15.0% |
| !! | ATTGAATAAAATTCGAAAAT+GGG | - | chr3_2:48173836-48173855 | Msa0408380:intron | 15.0% |
| !!! | ATATTGTCATTTCTAAAATA+CGG | + | chr3_2:48174313-48174332 | None:intergenic | 15.0% |
| !!! | TATGTTTAGATAAAGAATTT+TGG | + | chr3_2:48174584-48174603 | None:intergenic | 15.0% |
| !! | ATAAATCACTAAAATAAGAA+TGG | + | chr3_2:48174818-48174837 | None:intergenic | 15.0% |
| !! | ATTTCATACCTTAAATAAAT+AGG | - | chr3_2:48175167-48175186 | Msa0408380:CDS | 15.0% |
| !! | ATTAAGAAAATAGAAAGAAT+GGG | + | chr3_2:48175466-48175485 | None:intergenic | 15.0% |
| !! | TATTAAGAAAATAGAAAGAA+TGG | + | chr3_2:48175467-48175486 | None:intergenic | 15.0% |
| !! | TATGCATTATTATATGTTAA+AGG | - | chr3_2:48175537-48175556 | Msa0408380:intron | 15.0% |
| !! | TGTATAATTATGAATATAGT+GGG | - | chr3_2:48175605-48175624 | Msa0408380:intron | 15.0% |
| !!! | ATTTCCTTTGATTTATAATT+TGG | - | chr3_2:48176874-48176893 | Msa0408380:intron | 15.0% |
| !! | TCCAAAATATAAAAAGAATT+AGG | + | chr3_2:48177003-48177022 | None:intergenic | 15.0% |
| !! | ATAACAATTGCATATATTTA+AGG | - | chr3_2:48177139-48177158 | Msa0408380:intron | 15.0% |
| !!! | ACACTTTAATTTAAGTTATA+TGG | - | chr3_2:48177594-48177613 | Msa0408380:intron | 15.0% |
| !!! | ACACTATAATTTAAGTTATA+TGG | - | chr3_2:48177727-48177746 | Msa0408380:intron | 15.0% |
| !!! | TTTATTTTTTATTTTGCCAT+TGG | + | chr3_2:48178949-48178968 | None:intergenic | 15.0% |
| !!! | AAAATTTTTAGAGTTATCTA+TGG | + | chr3_2:48179093-48179112 | None:intergenic | 15.0% |
| !! | ATTGAAACTAACAAAATAAT+TGG | - | chr3_2:48179658-48179677 | Msa0408380:intron | 15.0% |
| !! | TCATTATCTATTGAATATAA+CGG | - | chr3_2:48180385-48180404 | Msa0408380:intron | 15.0% |
| !! | TTAGATTAAAACAGAAATTT+GGG | + | chr3_2:48180508-48180527 | None:intergenic | 15.0% |
| !! | ATTAGATTAAAACAGAAATT+TGG | + | chr3_2:48180509-48180528 | None:intergenic | 15.0% |
| !!! | TTTGATCATATTAGTTATTT+TGG | - | chr3_2:48180724-48180743 | Msa0408380:intron | 15.0% |
| !! | TTCACTAATATATAAAAAAC+TGG | - | chr3_2:48180862-48180881 | Msa0408380:intron | 15.0% |
| !! | TCACTAATATATAAAAAACT+GGG | - | chr3_2:48180863-48180882 | Msa0408380:intron | 15.0% |
| !! | TTGACATTATATATAACATT+TGG | + | chr3_2:48181309-48181328 | None:intergenic | 15.0% |
| !! | ATTGAAATGATATTAAAACA+TGG | + | chr3_2:48181455-48181474 | None:intergenic | 15.0% |
| !!! | ATTTATTTGTTTGGTAGTAA+TGG | + | chr3_2:48173399-48173418 | None:intergenic | 20.0% |
| !! | GAAAGAATCATTTATTTGTT+TGG | + | chr3_2:48173408-48173427 | None:intergenic | 20.0% |
| !!! | TTTTCAGAAATTCAACAAAA+TGG | + | chr3_2:48173731-48173750 | None:intergenic | 20.0% |
| !! | AATTGAGTCAAATTGTAAAA+TGG | - | chr3_2:48173750-48173769 | Msa0408380:intron | 20.0% |
| !! | ATTGAGTCAAATTGTAAAAT+GGG | - | chr3_2:48173751-48173770 | Msa0408380:intron | 20.0% |
| !! | TTTCAAACATTCAACAAAAT+GGG | + | chr3_2:48173815-48173834 | None:intergenic | 20.0% |
| !!! | TTTTCAAACATTCAACAAAA+TGG | + | chr3_2:48173816-48173835 | None:intergenic | 20.0% |
| !! | TTCCCAAAATTTAACAAAAT+GGG | + | chr3_2:48173900-48173919 | None:intergenic | 20.0% |
| !! | TTTCCCAAAATTTAACAAAA+TGG | + | chr3_2:48173901-48173920 | None:intergenic | 20.0% |
| !!! | TTTGTTAAATTTTGGGAAAA+TGG | - | chr3_2:48173902-48173921 | Msa0408380:intron | 20.0% |
| !! | AAAATGGAATAGAATTTAGT+TGG | - | chr3_2:48173918-48173937 | Msa0408380:intron | 20.0% |
| !! | AAATGGAATAGAATTTAGTT+GGG | - | chr3_2:48173919-48173938 | Msa0408380:intron | 20.0% |
| !!! | TTTTTCTTTTAACATGTAAC+AGG | + | chr3_2:48174132-48174151 | None:intergenic | 20.0% |
| !!! | GTATTTTAGAAATGACAATA+TGG | - | chr3_2:48174312-48174331 | Msa0408380:intron | 20.0% |
| !!! | TTTAGATAAAGAATTTTGGA+GGG | + | chr3_2:48174580-48174599 | None:intergenic | 20.0% |
| !!! | AAATATTTGGTTTTTGGTAT+TGG | - | chr3_2:48174629-48174648 | Msa0408380:intron | 20.0% |
| !!! | AGTGATTTATATTTTTGATG+TGG | - | chr3_2:48174828-48174847 | Msa0408380:intron | 20.0% |
| !! | AAATAATATTTCAAAACCTG+AGG | + | chr3_2:48174989-48175008 | None:intergenic | 20.0% |
| !!! | AGGTTTTGAAATATTATTTC+TGG | - | chr3_2:48174990-48175009 | Msa0408380:intron | 20.0% |
| !! | CTGTATAATTATGAATATAG+TGG | - | chr3_2:48175604-48175623 | Msa0408380:intron | 20.0% |
| !!! | GGATTTTAATTTAGATGTTA+CGG | - | chr3_2:48175629-48175648 | Msa0408380:intron | 20.0% |
| !!! | AGAAACTATTCATTGTTATT+AGG | - | chr3_2:48175924-48175943 | Msa0408380:intron | 20.0% |
| !! | TCATTTAAATCAATGTCAAT+CGG | + | chr3_2:48176208-48176227 | None:intergenic | 20.0% |
| !! | TATAATTATACCACAGATAA+CGG | + | chr3_2:48176580-48176599 | None:intergenic | 20.0% |
| !!! | TGCATATTTCTGATATAATA+TGG | - | chr3_2:48176830-48176849 | Msa0408380:intron | 20.0% |
| !!! | GCATATTTCTGATATAATAT+GGG | - | chr3_2:48176831-48176850 | Msa0408380:intron | 20.0% |
| !!! | CATATTTCTGATATAATATG+GGG | - | chr3_2:48176832-48176851 | Msa0408380:intron | 20.0% |
| !! | AGAACCAAATTATAAATCAA+AGG | + | chr3_2:48176881-48176900 | None:intergenic | 20.0% |
| !!! | GCCTAATTCTTTTTATATTT+TGG | - | chr3_2:48176999-48177018 | Msa0408380:intron | 20.0% |
| !!! | GAAATTCTCTGTTTTTTTTT+TGG | - | chr3_2:48177021-48177040 | Msa0408380:intron | 20.0% |
| !!! | TTTTTTTGGATAGAATGTTT+AGG | - | chr3_2:48177035-48177054 | Msa0408380:intron | 20.0% |
| !!! | ATCACTTTTTATTTTGTCAT+TGG | - | chr3_2:48177082-48177101 | Msa0408380:intron | 20.0% |
| !!! | TTATTTCTACTAATTTACCA+GGG | - | chr3_2:48177897-48177916 | Msa0408380:intron | 20.0% |
| !!! | TTTTCAAACTTCAAAATAGT+AGG | - | chr3_2:48178531-48178550 | Msa0408380:intron | 20.0% |
| !! | TTTCAAACTTCAAAATAGTA+GGG | - | chr3_2:48178532-48178551 | Msa0408380:intron | 20.0% |
| !! | ACATAAACAATTTATTTCCT+CGG | + | chr3_2:48178793-48178812 | None:intergenic | 20.0% |
| !!! | AGATAACTCTAAAAATTTTC+TGG | - | chr3_2:48179094-48179113 | Msa0408380:intron | 20.0% |
| !!! | AATTTAAATTGTTTTTGTGC+TGG | - | chr3_2:48179142-48179161 | Msa0408380:intron | 20.0% |
| !! | CCATATCATATTAATTATTC+GGG | + | chr3_2:48179253-48179272 | None:intergenic | 20.0% |
| !! | CCCATATCATATTAATTATT+CGG | + | chr3_2:48179254-48179273 | None:intergenic | 20.0% |
| !! | CCGAATAATTAATATGATAT+GGG | - | chr3_2:48179251-48179270 | Msa0408380:intron | 20.0% |
| !!! | TTTTTTGAAGAGAAACAAAA+TGG | + | chr3_2:48179379-48179398 | None:intergenic | 20.0% |
| !!! | AATATTGGTAGTATTTGTTT+TGG | - | chr3_2:48179589-48179608 | Msa0408380:intron | 20.0% |
| !! | AAACTAACAAAATAATTGGA+TGG | - | chr3_2:48179662-48179681 | Msa0408380:intron | 20.0% |
| !! | TTAATTCTTCCTAAATTAAG+AGG | - | chr3_2:48179742-48179761 | Msa0408380:intron | 20.0% |
| !! | TCCTAAAATTAAAAGGAAAT+GGG | + | chr3_2:48180163-48180182 | None:intergenic | 20.0% |
| !! | TGGAAAATCTATAAAAGAAA+AGG | + | chr3_2:48180433-48180452 | None:intergenic | 20.0% |
| !! | ATTATTCATATTTATCAAGG+TGG | + | chr3_2:48180453-48180472 | None:intergenic | 20.0% |
| !! | ACCTTGATAAATATGAATAA+TGG | - | chr3_2:48180452-48180471 | Msa0408380:intron | 20.0% |
| !! | TCCATTATTCATATTTATCA+AGG | + | chr3_2:48180456-48180475 | None:intergenic | 20.0% |
| !!! | GTTATTTATTTCTGATATGA+TGG | - | chr3_2:48180537-48180556 | Msa0408380:intron | 20.0% |
| !! | AATTTGAAAATTCTCAATCA+AGG | + | chr3_2:48180765-48180784 | None:intergenic | 20.0% |
| !!! | TTGAAATTTTGTTAAGTTCA+AGG | - | chr3_2:48180796-48180815 | Msa0408380:intron | 20.0% |
| !! | CACTAATATATAAAAAACTG+GGG | - | chr3_2:48180864-48180883 | Msa0408380:intron | 20.0% |
| !! | TCTTATAAATGTGAATTGTT+TGG | - | chr3_2:48180921-48180940 | Msa0408380:intron | 20.0% |
| !! | AAAAAATTAGATTATGTCTC+AGG | + | chr3_2:48181038-48181057 | None:intergenic | 20.0% |
| !! | ATGATGAATTATCAACATAA+TGG | + | chr3_2:48181159-48181178 | None:intergenic | 20.0% |
| !! | CATTATATATAACATTTGGT+GGG | + | chr3_2:48181305-48181324 | None:intergenic | 20.0% |
| !! | ACATTATATATAACATTTGG+TGG | + | chr3_2:48181306-48181325 | None:intergenic | 20.0% |
| !! | TCGATGAAATAAGAAAATTA+AGG | - | chr3_2:48181365-48181384 | Msa0408380:intron | 20.0% |
| !! | GAAAATTAAGGATATAGTAA+TGG | - | chr3_2:48181377-48181396 | Msa0408380:intron | 20.0% |
| !! | TAAGTAACAAAACAAATACA+GGG | + | chr3_2:48181690-48181709 | None:intergenic | 20.0% |
| !! | ATAAGTAACAAAACAAATAC+AGG | + | chr3_2:48181691-48181710 | None:intergenic | 20.0% |
| !! | TGACCCATTTTGTTAAATTT+TGG | - | chr3_2:48173894-48173913 | Msa0408380:intron | 25.0% |
| !! | GACCCATTTTGTTAAATTTT+GGG | - | chr3_2:48173895-48173914 | Msa0408380:intron | 25.0% |
| ! | AAATCTGTTAATCAAGTCAT+AGG | - | chr3_2:48174149-48174168 | Msa0408380:intron | 25.0% |
| ! | AATCTGTTAATCAAGTCATA+GGG | - | chr3_2:48174150-48174169 | Msa0408380:intron | 25.0% |
| ! | AATATGGAAACATAAAGTGA+AGG | - | chr3_2:48174328-48174347 | Msa0408380:intron | 25.0% |
| ! | ATATGGAAACATAAAGTGAA+GGG | - | chr3_2:48174329-48174348 | Msa0408380:intron | 25.0% |
| !!! | TTAGATAAAGAATTTTGGAG+GGG | + | chr3_2:48174579-48174598 | None:intergenic | 25.0% |
| !! | GTTTAGATAAAGAATTTTGG+AGG | + | chr3_2:48174581-48174600 | None:intergenic | 25.0% |
| ! | ATACTATGGGACTAAATATT+TGG | - | chr3_2:48174616-48174635 | Msa0408380:intron | 25.0% |
| !!! | GATTTATATTTTTGATGTGG+TGG | - | chr3_2:48174831-48174850 | Msa0408380:intron | 25.0% |
| ! | CCTTAAATAAATAGGTTACA+CGG | - | chr3_2:48175175-48175194 | Msa0408380:CDS | 25.0% |
| ! | TTGAAAAACATCTAAATGCT+TGG | - | chr3_2:48175425-48175444 | Msa0408380:intron | 25.0% |
| ! | TTCTGTTGAATACAAATTCT+TGG | - | chr3_2:48175497-48175516 | Msa0408380:intron | 25.0% |
| !! | ATAATTATGAATATAGTGGG+TGG | - | chr3_2:48175608-48175627 | Msa0408380:intron | 25.0% |
| ! | AAGCAGAAAGATTAATGTAA+TGG | - | chr3_2:48175659-48175678 | Msa0408380:intron | 25.0% |
| ! | AGCAGAAAGATTAATGTAAT+GGG | - | chr3_2:48175660-48175679 | Msa0408380:intron | 25.0% |
| ! | GAGAGAGTTTAACTAAAATA+AGG | - | chr3_2:48175946-48175965 | Msa0408380:intron | 25.0% |
| ! | AAATAAGGAAAATTTCATGC+AGG | - | chr3_2:48175961-48175980 | Msa0408380:intron | 25.0% |
| ! | ATATCATATTTCCGTATACT+TGG | - | chr3_2:48176077-48176096 | Msa0408380:intron | 25.0% |
| ! | ACATATTCTAACCAAGTATA+CGG | + | chr3_2:48176091-48176110 | None:intergenic | 25.0% |
| ! | GAAGATAAAAAAGAGATAAC+AGG | + | chr3_2:48176114-48176133 | None:intergenic | 25.0% |
| !!! | TTATTTTCAAGTGATTAGCT+TGG | - | chr3_2:48176659-48176678 | Msa0408380:intron | 25.0% |
| ! | ATTGACACAACAATATTGTT+AGG | - | chr3_2:48176696-48176715 | Msa0408380:intron | 25.0% |
| !!! | CTTTTTATTTTGTCATTGGA+TGG | - | chr3_2:48177086-48177105 | Msa0408380:intron | 25.0% |
| ! | GCATATATTTAAGGATTAAC+AGG | - | chr3_2:48177148-48177167 | Msa0408380:intron | 25.0% |
| ! | CTTAAGAAGAGTTTATAAAG+AGG | - | chr3_2:48177504-48177523 | Msa0408380:intron | 25.0% |
| !! | TTGAGTATTGTTGAAATTTG+GGG | + | chr3_2:48177575-48177594 | None:intergenic | 25.0% |
| !! | GTTGAGTATTGTTGAAATTT+GGG | + | chr3_2:48177576-48177595 | None:intergenic | 25.0% |
| !! | TGTTGAGTATTGTTGAAATT+TGG | + | chr3_2:48177577-48177596 | None:intergenic | 25.0% |
| ! | GTTTCTTTGAATTCTAAGTA+AGG | - | chr3_2:48177638-48177657 | Msa0408380:intron | 25.0% |
| ! | GTTTCTTTGAATTCTAAGTA+AGG | - | chr3_2:48177638-48177657 | Msa0408380:intron | 25.0% |
| !!! | CTTATTTCTACTAATTTACC+AGG | - | chr3_2:48177896-48177915 | Msa0408380:intron | 25.0% |
| !! | ATTTTCTATCAGCAGAATAA+AGG | + | chr3_2:48177975-48177994 | None:intergenic | 25.0% |
| !! | CATACATCGTATTTCTTTTT+CGG | - | chr3_2:48178179-48178198 | Msa0408380:intron | 25.0% |
| ! | TAATGTCAATACTCTTAATC+AGG | - | chr3_2:48178236-48178255 | Msa0408380:intron | 25.0% |
| !! | ATACCATGAGTTTAAAATTG+AGG | - | chr3_2:48178447-48178466 | Msa0408380:CDS | 25.0% |
| !! | AAACCTCAATTTTAAACTCA+TGG | + | chr3_2:48178453-48178472 | None:intergenic | 25.0% |
| ! | TTAATATATCAGAAAGCAGA+AGG | - | chr3_2:48178653-48178672 | Msa0408380:intron | 25.0% |
| ! | TAATATATCAGAAAGCAGAA+GGG | - | chr3_2:48178654-48178673 | Msa0408380:CDS | 25.0% |
| ! | TGTGAAGATTTCATGTATAA+TGG | - | chr3_2:48178750-48178769 | Msa0408380:CDS | 25.0% |
| ! | CCCGAATAATTAATATGATA+TGG | - | chr3_2:48179250-48179269 | Msa0408380:intron | 25.0% |
| ! | ACTAAATATACAATATGGCT+TGG | - | chr3_2:48179315-48179334 | Msa0408380:intron | 25.0% |
| ! | ACGTTAAAAAAATAGCTTCA+AGG | - | chr3_2:48179440-48179459 | Msa0408380:intron | 25.0% |
| ! | TCTTAACAAGTAAAAGAAGT+TGG | - | chr3_2:48179528-48179547 | Msa0408380:intron | 25.0% |
| ! | TAAACATGTCCTCTTAATTT+AGG | + | chr3_2:48179754-48179773 | None:intergenic | 25.0% |
| !! | AAGCATAATTTGTGTAACTA+TGG | - | chr3_2:48179850-48179869 | Msa0408380:intron | 25.0% |
| !! | TCATTAGTTCGAATATTTTC+TGG | - | chr3_2:48179890-48179909 | Msa0408380:intron | 25.0% |
| ! | TGGGTGATTAAAATTAAATC+AGG | + | chr3_2:48180144-48180163 | None:intergenic | 25.0% |
| !!! | ACCCATTTCCTTTTAATTTT+AGG | - | chr3_2:48180159-48180178 | Msa0408380:intron | 25.0% |
| ! | CTCCTAAAATTAAAAGGAAA+TGG | + | chr3_2:48180164-48180183 | None:intergenic | 25.0% |
| !!! | CATTTCCTTTTAATTTTAGG+AGG | - | chr3_2:48180162-48180181 | Msa0408380:intron | 25.0% |
| ! | AGATACCTCCTAAAATTAAA+AGG | + | chr3_2:48180170-48180189 | None:intergenic | 25.0% |
| ! | TTCGATTGCATATAATAAAG+CGG | - | chr3_2:48180211-48180230 | Msa0408380:intron | 25.0% |
| ! | AATTCACATTTATAAGATGC+AGG | + | chr3_2:48180918-48180937 | None:intergenic | 25.0% |
| ! | CAAATAGTTTCAACTTAAGT+TGG | + | chr3_2:48181404-48181423 | None:intergenic | 25.0% |
| ! | AACAAAATGATGATCTCTAT+AGG | + | chr3_2:48181480-48181499 | None:intergenic | 25.0% |
| !! | ATTTAAAACGTATGTGAGAT+AGG | - | chr3_2:48181576-48181595 | Msa0408380:CDS | 25.0% |
| ! | TTAGTTGGGTGATGAAATTT+TGG | - | chr3_2:48173933-48173952 | Msa0408380:intron | 30.0% |
| !!! | AATTTTGGTGTTTGATTTGC+AGG | - | chr3_2:48173948-48173967 | Msa0408380:intron | 30.0% |
| ATATACATACATACATACCG+TGG | + | chr3_2:48174016-48174035 | None:intergenic | 30.0% | |
| ! | TGATGATGTTATGTTGTGTT+TGG | - | chr3_2:48174052-48174071 | Msa0408380:intron | 30.0% |
| ! | AATCTTTTGTGTTAACCCTA+TGG | + | chr3_2:48174245-48174264 | None:intergenic | 30.0% |
| AAAATACGGTTACATCAGTA+GGG | + | chr3_2:48174299-48174318 | None:intergenic | 30.0% | |
| TAAAATACGGTTACATCAGT+AGG | + | chr3_2:48174300-48174319 | None:intergenic | 30.0% | |
| TTGAGCTCTTATGATATGTT+TGG | - | chr3_2:48174385-48174404 | Msa0408380:intron | 30.0% | |
| TTTATCTAAACATACCCTTG+AGG | - | chr3_2:48174590-48174609 | Msa0408380:intron | 30.0% | |
| TTATCTAAACATACCCTTGA+GGG | - | chr3_2:48174591-48174610 | Msa0408380:intron | 30.0% | |
| !!! | GGGACTAAATATTTGGTTTT+TGG | - | chr3_2:48174623-48174642 | Msa0408380:intron | 30.0% |
| !!! | GGATTTTTTGATAACCTTCA+TGG | - | chr3_2:48174694-48174713 | Msa0408380:intron | 30.0% |
| !!! | TATTTTTGATGTGGTGGATT+TGG | - | chr3_2:48174837-48174856 | Msa0408380:intron | 30.0% |
| CAAAATTTGAGTCATGAACA+TGG | - | chr3_2:48175077-48175096 | Msa0408380:intron | 30.0% | |
| TGTGGGAATGTTGTATTATA+TGG | - | chr3_2:48175131-48175150 | Msa0408380:intron | 30.0% | |
| CCGTGTAACCTATTTATTTA+AGG | + | chr3_2:48175178-48175197 | None:intergenic | 30.0% | |
| TAAATAAATAGGTTACACGG+AGG | - | chr3_2:48175178-48175197 | Msa0408380:CDS | 30.0% | |
| AAATAAATAGGTTACACGGA+GGG | - | chr3_2:48175179-48175198 | Msa0408380:CDS | 30.0% | |
| ATTTGAACAGCGTAATAATG+AGG | - | chr3_2:48175215-48175234 | Msa0408380:intron | 30.0% | |
| AGAAATTTGAGTCATGTACA+CGG | - | chr3_2:48175297-48175316 | Msa0408380:intron | 30.0% | |
| AAAAACATCTAAATGCTTGG+AGG | - | chr3_2:48175428-48175447 | Msa0408380:intron | 30.0% | |
| AATGCATATCATACTCTGTT+AGG | + | chr3_2:48175525-48175544 | None:intergenic | 30.0% | |
| ! | AAAGGCATACTTTACATCAT+AGG | - | chr3_2:48175555-48175574 | Msa0408380:intron | 30.0% |
| TTACATCATAGGTTACATGT+AGG | - | chr3_2:48175566-48175585 | Msa0408380:intron | 30.0% | |
| TACATCATAGGTTACATGTA+GGG | - | chr3_2:48175567-48175586 | Msa0408380:intron | 30.0% | |
| ACTGAACACCTAATAATTTC+AGG | + | chr3_2:48175691-48175710 | None:intergenic | 30.0% | |
| TTAGGTGTTCAGTTTACTAT+AGG | - | chr3_2:48175698-48175717 | Msa0408380:intron | 30.0% | |
| TCTATTGGGTCTTAAAAGTT+AGG | - | chr3_2:48175756-48175775 | Msa0408380:intron | 30.0% | |
| !! | GACTTGGTTTGTTTCAAATA+TGG | - | chr3_2:48175832-48175851 | Msa0408380:intron | 30.0% |
| !! | TGGTTTGTTTCAAATATGGT+TGG | - | chr3_2:48175836-48175855 | Msa0408380:intron | 30.0% |
| TAAGGAAACTACCTAAGAAA+CGG | + | chr3_2:48176019-48176038 | None:intergenic | 30.0% | |
| ! | TGTGTGATTAAACGCATTTT+TGG | - | chr3_2:48176179-48176198 | Msa0408380:intron | 30.0% |
| ! | TAATTATTCTCTGGCTTCTA+TGG | - | chr3_2:48176465-48176484 | Msa0408380:intron | 30.0% |
| GATATAATATGGGGACATAA+TGG | - | chr3_2:48176841-48176860 | Msa0408380:intron | 30.0% | |
| TGAATCTGAATCAAGAAACA+AGG | + | chr3_2:48176915-48176934 | None:intergenic | 30.0% | |
| ! | GATTCAGATTCATTTTCATC+TGG | - | chr3_2:48176923-48176942 | Msa0408380:CDS | 30.0% |
| TGTCAGTCATTAAATTGAGT+TGG | + | chr3_2:48177237-48177256 | None:intergenic | 30.0% | |
| ATTAGTCACATCAGTTGAAT+TGG | + | chr3_2:48177337-48177356 | None:intergenic | 30.0% | |
| GATGTGACTAATATACTTGT+TGG | - | chr3_2:48177345-48177364 | Msa0408380:intron | 30.0% | |
| AAGAAGAGTTTATAAAGAGG+AGG | - | chr3_2:48177507-48177526 | Msa0408380:intron | 30.0% | |
| AATGTAAGTGCACAAGAATT+TGG | - | chr3_2:48178009-48178028 | Msa0408380:intron | 30.0% | |
| !! | AGATTCAGTGTTTGAGTTTT+AGG | + | chr3_2:48178070-48178089 | None:intergenic | 30.0% |
| CAATACTCTTAATCAGGTAT+TGG | - | chr3_2:48178242-48178261 | Msa0408380:intron | 30.0% | |
| ! | ACTTGTCAAAGATTTGAAGT+TGG | - | chr3_2:48178290-48178309 | Msa0408380:CDS | 30.0% |
| ACTCATCCTACAAATACATT+GGG | + | chr3_2:48178397-48178416 | None:intergenic | 30.0% | |
| AACTCATCCTACAAATACAT+TGG | + | chr3_2:48178398-48178417 | None:intergenic | 30.0% | |
| ! | GGGTGTTTAAAATTCCAAAA+TGG | - | chr3_2:48178609-48178628 | Msa0408380:intron | 30.0% |
| AATATATCAGAAAGCAGAAG+GGG | - | chr3_2:48178655-48178674 | Msa0408380:CDS | 30.0% | |
| ! | TGTGTTTATTTGAGTGTTGT+TGG | - | chr3_2:48178915-48178934 | Msa0408380:CDS | 30.0% |
| !! | ATTCAAGCTTTTTGTCACTT+GGG | - | chr3_2:48179009-48179028 | Msa0408380:intron | 30.0% |
| AATACCACTCAACAAATCAA+TGG | + | chr3_2:48179192-48179211 | None:intergenic | 30.0% | |
| ATTAATTATTCGGGCTTCAT+AGG | + | chr3_2:48179244-48179263 | None:intergenic | 30.0% | |
| GTATGATGCAACATAGATTT+AGG | - | chr3_2:48179273-48179292 | Msa0408380:intron | 30.0% | |
| AACACAGACTTCAAACAAAT+TGG | - | chr3_2:48179494-48179513 | Msa0408380:intron | 30.0% | |
| TTCTCTTTGGATATGAATCT+TGG | - | chr3_2:48179555-48179574 | Msa0408380:intron | 30.0% | |
| !!! | ATTGGTAGTATTTGTTTTGG+TGG | - | chr3_2:48179592-48179611 | Msa0408380:intron | 30.0% |
| GTACATAAACAAGATTCATG+TGG | + | chr3_2:48179807-48179826 | None:intergenic | 30.0% | |
| TTGTGTAACTATGGTGAAAA+TGG | - | chr3_2:48179859-48179878 | Msa0408380:intron | 30.0% | |
| ACTTATTAGATAACAGTACC+TGG | + | chr3_2:48179990-48180009 | None:intergenic | 30.0% | |
| !!! | GGATTGATGTCATTTTTGTA+CGG | - | chr3_2:48180406-48180425 | Msa0408380:intron | 30.0% |
| ! | TTAAAACAGAAATTTGGGAC+TGG | + | chr3_2:48180503-48180522 | None:intergenic | 30.0% |
| AAGAGATTTGGGAATCAAAA+TGG | - | chr3_2:48180595-48180614 | Msa0408380:intron | 30.0% | |
| AGAGATTTGGGAATCAAAAT+GGG | - | chr3_2:48180596-48180615 | Msa0408380:intron | 30.0% | |
| TAATTTAGTCCCTGATATAG+TGG | + | chr3_2:48180838-48180857 | None:intergenic | 30.0% | |
| !!! | CAGGTATTGGATAAGATTTT+TGG | + | chr3_2:48181019-48181038 | None:intergenic | 30.0% |
| TTAGATTATGTCTCAGGTAT+TGG | + | chr3_2:48181032-48181051 | None:intergenic | 30.0% | |
| AACAGTGTAGCACTAATTTA+TGG | - | chr3_2:48181106-48181125 | Msa0408380:intron | 30.0% | |
| TGATGAAATTGTGCAGAAAT+TGG | - | chr3_2:48181517-48181536 | Msa0408380:intron | 30.0% | |
| !! | GTTTTAAATCGTCTTCAACT+TGG | + | chr3_2:48181565-48181584 | None:intergenic | 30.0% |
| TTTATGGTGCTTATTTAACC+TGG | - | chr3_2:48181614-48181633 | Msa0408380:CDS | 30.0% | |
| !! | TTTGGTTCTCTATATGTGAA+TGG | - | chr3_2:48181637-48181656 | Msa0408380:CDS | 30.0% |
| CAAAACAAATACAGGGTTAT+GGG | + | chr3_2:48181683-48181702 | None:intergenic | 30.0% | |
| ACAAAACAAATACAGGGTTA+TGG | + | chr3_2:48181684-48181703 | None:intergenic | 30.0% | |
| AATTGGAAAAAAGGAGATCA+TGG | + | chr3_2:48181844-48181863 | None:intergenic | 30.0% | |
| AAGATCGTTGTAAAGAGGTT+TGG | + | chr3_2:48173647-48173666 | None:intergenic | 35.0% | |
| AGTTGAAGATCGTTGTAAAG+AGG | + | chr3_2:48173652-48173671 | None:intergenic | 35.0% | |
| GTTATGTTGTGTTTGGATTG+TGG | - | chr3_2:48174059-48174078 | Msa0408380:intron | 35.0% | |
| TCCACTTAAGGATTCTTGTT+CGG | - | chr3_2:48174191-48174210 | Msa0408380:intron | 35.0% | |
| ! | ATTCTTGTTCGGGATTAGTA+GGG | - | chr3_2:48174202-48174221 | Msa0408380:intron | 35.0% |
| TGTTAACCCTATGGTTTCTA+GGG | + | chr3_2:48174236-48174255 | None:intergenic | 35.0% | |
| GCTCTTATGATATGTTTGGA+TGG | - | chr3_2:48174389-48174408 | Msa0408380:intron | 35.0% | |
| CTTATGATATGTTTGGATGG+AGG | - | chr3_2:48174392-48174411 | Msa0408380:intron | 35.0% | |
| ! | GGAGGGTTAAATCTATTTCT+TGG | - | chr3_2:48174425-48174444 | Msa0408380:intron | 35.0% |
| !! | ATAAAGAATTTTGGAGGGGA+GGG | + | chr3_2:48174575-48174594 | None:intergenic | 35.0% |
| ATAACCTTCATGGCCAATTT+GGG | - | chr3_2:48174704-48174723 | Msa0408380:intron | 35.0% | |
| !! | TTATTCTGAGGCTATTGCAA+TGG | - | chr3_2:48174871-48174890 | Msa0408380:intron | 35.0% |
| AGTATCATCAAGCCATTTCT+GGG | - | chr3_2:48174900-48174919 | Msa0408380:intron | 35.0% | |
| TTTATCCACAGTTTGGACTA+AGG | - | chr3_2:48174957-48174976 | Msa0408380:intron | 35.0% | |
| !!! | TGTGAGAATGTTGTTGGTTT+TGG | - | chr3_2:48175049-48175068 | Msa0408380:intron | 35.0% |
| TCTTTACCAAATGCTATCTG+TGG | - | chr3_2:48175113-48175132 | Msa0408380:intron | 35.0% | |
| CTTTACCAAATGCTATCTGT+GGG | - | chr3_2:48175114-48175133 | Msa0408380:intron | 35.0% | |
| CAGCGTAATAATGAGGATAT+TGG | - | chr3_2:48175222-48175241 | Msa0408380:intron | 35.0% | |
| ACTTTACCAAATGCTCTTTG+TGG | - | chr3_2:48175335-48175354 | Msa0408380:intron | 35.0% | |
| CTTTACCAAATGCTCTTTGT+GGG | - | chr3_2:48175336-48175355 | Msa0408380:intron | 35.0% | |
| !! | ATATTCCCACAAAGAGCATT+TGG | + | chr3_2:48175344-48175363 | None:intergenic | 35.0% |
| ACAATTGTCAAGATGAAACG+GGG | + | chr3_2:48175807-48175826 | None:intergenic | 35.0% | |
| CACAATTGTCAAGATGAAAC+GGG | + | chr3_2:48175808-48175827 | None:intergenic | 35.0% | |
| GCACAATTGTCAAGATGAAA+CGG | + | chr3_2:48175809-48175828 | None:intergenic | 35.0% | |
| GAATAGTTTCTGTAAGCACA+AGG | + | chr3_2:48175915-48175934 | None:intergenic | 35.0% | |
| TTGCAAAAGATCCGTTTCTT+AGG | - | chr3_2:48176005-48176024 | Msa0408380:intron | 35.0% | |
| TGAAATGTCTATGTCTTGTC+AGG | - | chr3_2:48176225-48176244 | Msa0408380:intron | 35.0% | |
| TCAAATGATTGTTGCTGAAG+CGG | - | chr3_2:48176267-48176286 | Msa0408380:intron | 35.0% | |
| TCTCCATCTTTCGAAATTAG+AGG | + | chr3_2:48176310-48176329 | None:intergenic | 35.0% | |
| TAGTGGGGTTAATTATTCTC+TGG | - | chr3_2:48176456-48176475 | Msa0408380:intron | 35.0% | |
| GTAATGCCAAGAAAACGATT+GGG | + | chr3_2:48176520-48176539 | None:intergenic | 35.0% | |
| TGTAATGCCAAGAAAACGAT+TGG | + | chr3_2:48176521-48176540 | None:intergenic | 35.0% | |
| TGAGTTTGCCATAAATAAGC+CGG | + | chr3_2:48176544-48176563 | None:intergenic | 35.0% | |
| GTTATCAGATGCCTTTGTAT+TGG | - | chr3_2:48176786-48176805 | Msa0408380:CDS | 35.0% | |
| AATCAAAGGAAATCGCCAAT+TGG | + | chr3_2:48176867-48176886 | None:intergenic | 35.0% | |
| GAAGTCAAAGTTCATCTTCA+CGG | - | chr3_2:48176945-48176964 | Msa0408380:CDS | 35.0% | |
| GAATAAAGCTCAAACCTTTC+TGG | + | chr3_2:48176974-48176993 | None:intergenic | 35.0% | |
| AAGAGTAAGTATGCAACCTA+GGG | - | chr3_2:48177109-48177128 | Msa0408380:intron | 35.0% | |
| AATTGTTATGTAGAAGCCCT+AGG | + | chr3_2:48177128-48177147 | None:intergenic | 35.0% | |
| TGGAAATTTCGCCTTTATTG+CGG | - | chr3_2:48177365-48177384 | Msa0408380:intron | 35.0% | |
| CGAACTCATTCTTACAAAAC+CGG | + | chr3_2:48177551-48177570 | None:intergenic | 35.0% | |
| !! | CGGTTTTGTAAGAATGAGTT+CGG | - | chr3_2:48177549-48177568 | Msa0408380:intron | 35.0% |
| TTGAATTCTAAGTAAGGACC+TGG | - | chr3_2:48177644-48177663 | Msa0408380:intron | 35.0% | |
| TTGAATTCTAAGTAAGGACC+TGG | - | chr3_2:48177644-48177663 | Msa0408380:intron | 35.0% | |
| GGATATTGAAAGAGAAGAAG+CGG | - | chr3_2:48177936-48177955 | Msa0408380:intron | 35.0% | |
| ! | TTTTCGGTCTCTACGTTATA+TGG | - | chr3_2:48178195-48178214 | Msa0408380:intron | 35.0% |
| !! | AGGTATTGGAGCAAATACTT+GGG | - | chr3_2:48178256-48178275 | Msa0408380:intron | 35.0% |
| TGACTTCCCAATGTATTTGT+AGG | - | chr3_2:48178388-48178407 | Msa0408380:intron | 35.0% | |
| AATTGTCTATCTACCCTTCT+GGG | + | chr3_2:48178570-48178589 | None:intergenic | 35.0% | |
| AAATTGTCTATCTACCCTTC+TGG | + | chr3_2:48178571-48178590 | None:intergenic | 35.0% | |
| !! | AGTAGAAAGTGTGTCCATTT+TGG | + | chr3_2:48178626-48178645 | None:intergenic | 35.0% |
| TTCCACATAAAATGTCCTCA+CGG | + | chr3_2:48178851-48178870 | None:intergenic | 35.0% | |
| ACTCAAATAAACACACACAC+GGG | + | chr3_2:48178910-48178929 | None:intergenic | 35.0% | |
| CACTCAAATAAACACACACA+CGG | + | chr3_2:48178911-48178930 | None:intergenic | 35.0% | |
| !! | TTATTTTGCCATTGGTCTAG+TGG | + | chr3_2:48178941-48178960 | None:intergenic | 35.0% |
| ! | GATTCAAGCTTTTTGTCACT+TGG | - | chr3_2:48179008-48179027 | Msa0408380:intron | 35.0% |
| !! | ATTGCCATTGATTTGTTGAG+TGG | - | chr3_2:48179185-48179204 | Msa0408380:intron | 35.0% |
| TTGAGTGGTATTGTTTAGTG+AGG | - | chr3_2:48179200-48179219 | Msa0408380:intron | 35.0% | |
| GAAACAAAATGGACCCAAAA+AGG | + | chr3_2:48179368-48179387 | None:intergenic | 35.0% | |
| AGAAGTTGGATGATTCTCTT+TGG | - | chr3_2:48179542-48179561 | Msa0408380:intron | 35.0% | |
| TCTTTGGATATGAATCTTGG+AGG | - | chr3_2:48179558-48179577 | Msa0408380:intron | 35.0% | |
| TTGGAGGACTTTGCAAATAT+TGG | - | chr3_2:48179574-48179593 | Msa0408380:intron | 35.0% | |
| AGCTGTGTAGTAATTAGCAT+GGG | - | chr3_2:48179685-48179704 | Msa0408380:intron | 35.0% | |
| TTTCCACTTAGCATCAAAGT+GGG | + | chr3_2:48179832-48179851 | None:intergenic | 35.0% | |
| CCTGGCAAAACTAACAAATT+GGG | + | chr3_2:48179972-48179991 | None:intergenic | 35.0% | |
| ACCTGGCAAAACTAACAAAT+TGG | + | chr3_2:48179973-48179992 | None:intergenic | 35.0% | |
| ATATCTGCAATTGCATGTCA+GGG | - | chr3_2:48180013-48180032 | Msa0408380:intron | 35.0% | |
| AAAACATGCATGTGGAAACA+AGG | + | chr3_2:48180244-48180263 | None:intergenic | 35.0% | |
| CAAATGCAAAAACATGCATG+TGG | + | chr3_2:48180252-48180271 | None:intergenic | 35.0% | |
| !! | CACATGCATGTTTTTGCATT+TGG | - | chr3_2:48180250-48180269 | Msa0408380:intron | 35.0% |
| ACATGAATTATGCTCTTCAC+AGG | - | chr3_2:48180283-48180302 | Msa0408380:CDS | 35.0% | |
| ATGACAAAATGCTCTCTACA+TGG | + | chr3_2:48180365-48180384 | None:intergenic | 35.0% | |
| !!! | TGGAGTTGAGAGTATTTTGA+TGG | - | chr3_2:48180557-48180576 | Msa0408380:intron | 35.0% |
| TTGCAACAACAGAAGAGATT+TGG | - | chr3_2:48180583-48180602 | Msa0408380:intron | 35.0% | |
| TGCAACAACAGAAGAGATTT+GGG | - | chr3_2:48180584-48180603 | Msa0408380:intron | 35.0% | |
| TTCAAGGACAAAGTTCACAA+TGG | - | chr3_2:48180812-48180831 | Msa0408380:intron | 35.0% | |
| AGAAATTGGAGAACATGCAA+TGG | - | chr3_2:48181531-48181550 | Msa0408380:intron | 35.0% | |
| ! | GCTTCAGCATAGAAGTTTTA+TGG | - | chr3_2:48181598-48181617 | Msa0408380:CDS | 35.0% |
| CTATATGTGAATGGTGTGAA+AGG | - | chr3_2:48181646-48181665 | Msa0408380:CDS | 35.0% | |
| ATATGAAACATCATTCCTCG+CGG | - | chr3_2:48181718-48181737 | Msa0408380:five_prime_UTR | 35.0% | |
| ! | CAAGGAATGAGAACAGTTTT+AGG | + | chr3_2:48181771-48181790 | None:intergenic | 35.0% |
| AATGGATCAGTAAGAGATCA+AGG | + | chr3_2:48181789-48181808 | None:intergenic | 35.0% | |
| ACCGTTTGGATCAATGGTTA+AGG | - | chr3_2:48173531-48173550 | Msa0408380:three_prime_UTR | 40.0% | |
| CCCTTAACCATTGATCCAAA+CGG | + | chr3_2:48173535-48173554 | None:intergenic | 40.0% | |
| CCGTTTGGATCAATGGTTAA+GGG | - | chr3_2:48173532-48173551 | Msa0408380:three_prime_UTR | 40.0% | |
| ! | ATCGATGAGTTGGGATACAT+CGG | + | chr3_2:48173581-48173600 | None:intergenic | 40.0% |
| ! | TTCTAGCTGATCGATGAGTT+GGG | + | chr3_2:48173590-48173609 | None:intergenic | 40.0% |
| TTGGAAATGAGAGATCCATC+AGG | + | chr3_2:48173628-48173647 | None:intergenic | 40.0% | |
| ACAACGATCTTCAACTCGTA+TGG | - | chr3_2:48173656-48173675 | Msa0408380:CDS | 40.0% | |
| TAGGGAAAGACTCCGTTATT+TGG | - | chr3_2:48173987-48174006 | Msa0408380:CDS | 40.0% | |
| ATACCGTGGCTTCCAAATAA+CGG | + | chr3_2:48174002-48174021 | None:intergenic | 40.0% | |
| GTTGTGTTTGGATTGTGGAT+TGG | - | chr3_2:48174064-48174083 | Msa0408380:intron | 40.0% | |
| CCACTTAAGGATTCTTGTTC+GGG | - | chr3_2:48174192-48174211 | Msa0408380:intron | 40.0% | |
| ! | GATTCTTGTTCGGGATTAGT+AGG | - | chr3_2:48174201-48174220 | Msa0408380:intron | 40.0% |
| ! | GTTAACCCTATGGTTTCTAG+GGG | + | chr3_2:48174235-48174254 | None:intergenic | 40.0% |
| GTGTTAACCCTATGGTTTCT+AGG | + | chr3_2:48174237-48174256 | None:intergenic | 40.0% | |
| !! | GTTACATCAGTAGGGTATTG+TGG | + | chr3_2:48174291-48174310 | None:intergenic | 40.0% |
| !! | TAAAGAATTTTGGAGGGGAG+GGG | + | chr3_2:48174574-48174593 | None:intergenic | 40.0% |
| !! | GATAAAGAATTTTGGAGGGG+AGG | + | chr3_2:48174576-48174595 | None:intergenic | 40.0% |
| TACCCTTGAGGGTTATACTA+TGG | - | chr3_2:48174602-48174621 | Msa0408380:intron | 40.0% | |
| ACCCTTGAGGGTTATACTAT+GGG | - | chr3_2:48174603-48174622 | Msa0408380:intron | 40.0% | |
| TCCCATAGTATAACCCTCAA+GGG | + | chr3_2:48174607-48174626 | None:intergenic | 40.0% | |
| GTCCCAGTGTTGTCAAATAT+CGG | - | chr3_2:48174651-48174670 | Msa0408380:intron | 40.0% | |
| GATAACCTTCATGGCCAATT+TGG | - | chr3_2:48174703-48174722 | Msa0408380:intron | 40.0% | |
| TGTCACAATCCTTCCCAAAT+TGG | + | chr3_2:48174720-48174739 | None:intergenic | 40.0% | |
| CAACCAAATAGTGTTCTCGA+TGG | + | chr3_2:48174767-48174786 | None:intergenic | 40.0% | |
| GTTGCAGGCTATTTATTCTG+AGG | - | chr3_2:48174859-48174878 | Msa0408380:intron | 40.0% | |
| GAGTATCATCAAGCCATTTC+TGG | - | chr3_2:48174899-48174918 | Msa0408380:intron | 40.0% | |
| ATCGGTGGAATTAGAGATAC+TGG | - | chr3_2:48174929-48174948 | Msa0408380:intron | 40.0% | |
| AACCAACAACATTCTCACAC+AGG | + | chr3_2:48175048-48175067 | None:intergenic | 40.0% | |
| ACATTCCCACAGATAGCATT+TGG | + | chr3_2:48175122-48175141 | None:intergenic | 40.0% | |
| GGGCGTTTCCTGAAATTATT+AGG | - | chr3_2:48175680-48175699 | Msa0408380:intron | 40.0% | |
| GGTGTTCAGTTTACTATAGG+TGG | - | chr3_2:48175701-48175720 | Msa0408380:intron | 40.0% | |
| GGGTCTTAAAAGTTAGGTGT+TGG | - | chr3_2:48175762-48175781 | Msa0408380:intron | 40.0% | |
| !! | TTGACAATTGTGCACTGACT+TGG | - | chr3_2:48175816-48175835 | Msa0408380:intron | 40.0% |
| TAGGTAGTTTCCTTAGAGTG+AGG | - | chr3_2:48176024-48176043 | Msa0408380:intron | 40.0% | |
| CTGCCTCTAATTTCGAAAGA+TGG | - | chr3_2:48176304-48176323 | Msa0408380:intron | 40.0% | |
| GCTTGGAGTGGTATAATTAG+AGG | + | chr3_2:48176428-48176447 | None:intergenic | 40.0% | |
| ! | TCGTTTTCTTGGCATTACAC+CGG | - | chr3_2:48176522-48176541 | Msa0408380:intron | 40.0% |
| !! | GCATTACACCGGCTTATTTA+TGG | - | chr3_2:48176533-48176552 | Msa0408380:intron | 40.0% |
| GCCTTTGTATTGGATGACAA+CGG | - | chr3_2:48176796-48176815 | Msa0408380:CDS | 40.0% | |
| ACCGTTGTCATCCAATACAA+AGG | + | chr3_2:48176800-48176819 | None:intergenic | 40.0% | |
| GAAGAGTAAGTATGCAACCT+AGG | - | chr3_2:48177108-48177127 | Msa0408380:intron | 40.0% | |
| !! | CTTCATTGTGTTGGCTTTGA+GGG | - | chr3_2:48177447-48177466 | Msa0408380:intron | 40.0% |
| !! | TTCATTGTGTTGGCTTTGAG+GGG | - | chr3_2:48177448-48177467 | Msa0408380:intron | 40.0% |
| !! | TCTTACAAAACCGGCTTGTA+AGG | + | chr3_2:48177542-48177561 | None:intergenic | 40.0% |
| CACTTTACACATTAGTGCAC+AGG | + | chr3_2:48177680-48177699 | None:intergenic | 40.0% | |
| AATGTGTAAAGTGCATGCCT+CGG | - | chr3_2:48177687-48177706 | Msa0408380:intron | 40.0% | |
| GACATACAATTACGTTACCG+AGG | + | chr3_2:48177707-48177726 | None:intergenic | 40.0% | |
| CACTTTACACATTAGTGCAC+AGG | + | chr3_2:48177680-48177699 | None:intergenic | 40.0% | |
| AATGTGTAAAGTGCATGCCT+CGG | - | chr3_2:48177687-48177706 | Msa0408380:intron | 40.0% | |
| GACATACAATTACGTTACCG+AGG | + | chr3_2:48177707-48177726 | None:intergenic | 40.0% | |
| CTCAATTAACAACTTCACCC+TGG | + | chr3_2:48177917-48177936 | None:intergenic | 40.0% | |
| CAGGGTGAAGTTGTTAATTG+AGG | - | chr3_2:48177915-48177934 | Msa0408380:intron | 40.0% | |
| !! | CAGGTATTGGAGCAAATACT+TGG | - | chr3_2:48178255-48178274 | Msa0408380:intron | 40.0% |
| ! | GGTATTGGAGCAAATACTTG+GGG | - | chr3_2:48178257-48178276 | Msa0408380:intron | 40.0% |
| AGGATGAGTTGCAGAAAACA+TGG | - | chr3_2:48178408-48178427 | Msa0408380:intron | 40.0% | |
| ! | GGGATTTTATCCATGCACAT+TGG | - | chr3_2:48178713-48178732 | Msa0408380:CDS | 40.0% |
| CTATTAACTGCCAATGTGCA+TGG | + | chr3_2:48178726-48178745 | None:intergenic | 40.0% | |
| CCACTAGGCTGTAACAATAT+TGG | + | chr3_2:48178823-48178842 | None:intergenic | 40.0% | |
| CCAATATTGTTACAGCCTAG+TGG | - | chr3_2:48178820-48178839 | Msa0408380:CDS | 40.0% | |
| ATTGTTACAGCCTAGTGGTT+TGG | - | chr3_2:48178825-48178844 | Msa0408380:CDS | 40.0% | |
| ! | GGACATTTTATGTGGAATCC+CGG | - | chr3_2:48178854-48178873 | Msa0408380:CDS | 40.0% |
| ! | GACATTTTATGTGGAATCCC+GGG | - | chr3_2:48178855-48178874 | Msa0408380:CDS | 40.0% |
| AGAAATGTGGTAACCGGATT+CGG | + | chr3_2:48178882-48178901 | None:intergenic | 40.0% | |
| CTCAAATAAACACACACACG+GGG | + | chr3_2:48178909-48178928 | None:intergenic | 40.0% | |
| ! | AACCAAATCCTCTGCCTTTT+TGG | - | chr3_2:48179351-48179370 | Msa0408380:intron | 40.0% |
| ! | ACCAAATCCTCTGCCTTTTT+GGG | - | chr3_2:48179352-48179371 | Msa0408380:intron | 40.0% |
| GAGCTGTGTAGTAATTAGCA+TGG | - | chr3_2:48179684-48179703 | Msa0408380:intron | 40.0% | |
| CTTTCCACTTAGCATCAAAG+TGG | + | chr3_2:48179833-48179852 | None:intergenic | 40.0% | |
| !!! | CCCAATTTGTTAGTTTTGCC+AGG | - | chr3_2:48179969-48179988 | Msa0408380:intron | 40.0% |
| GATATCTGCAATTGCATGTC+AGG | - | chr3_2:48180012-48180031 | Msa0408380:intron | 40.0% | |
| TTAGAATATCAGCTCCTCCA+CGG | - | chr3_2:48180038-48180057 | Msa0408380:intron | 40.0% | |
| TTCACAATGGCCACTATATC+AGG | - | chr3_2:48180825-48180844 | Msa0408380:intron | 40.0% | |
| TCACAATGGCCACTATATCA+GGG | - | chr3_2:48180826-48180845 | Msa0408380:intron | 40.0% | |
| ATTCATCATGTGTGTGTACC+AGG | - | chr3_2:48181170-48181189 | Msa0408380:intron | 40.0% | |
| ACAGTACCACGACATTGTAA+AGG | - | chr3_2:48181248-48181267 | Msa0408380:CDS | 40.0% | |
| TTGTCACCTTTACAATGTCG+TGG | + | chr3_2:48181257-48181276 | None:intergenic | 40.0% | |
| GGTGCTTATTTAACCTGGTT+TGG | - | chr3_2:48181619-48181638 | Msa0408380:CDS | 40.0% | |
| CACATATAGAGAACCAAACC+AGG | + | chr3_2:48181635-48181654 | None:intergenic | 40.0% | |
| ACAAATACAGGGTTATGGGA+GGG | + | chr3_2:48181679-48181698 | None:intergenic | 40.0% | |
| AACAAATACAGGGTTATGGG+AGG | + | chr3_2:48181680-48181699 | None:intergenic | 40.0% | |
| GATCCATTCTTGTGTAACCA+AGG | - | chr3_2:48181801-48181820 | Msa0408380:five_prime_UTR | 40.0% | |
| ! | AAGAGTTTTCTTCTCCACCT+TGG | + | chr3_2:48181821-48181840 | None:intergenic | 40.0% |
| !!! | TGATCCAAACGGTGTCGTTT+TGG | + | chr3_2:48173524-48173543 | None:intergenic | 45.0% |
| AACGACACCGTTTGGATCAA+TGG | - | chr3_2:48173525-48173544 | Msa0408380:three_prime_UTR | 45.0% | |
| ! | TGAGTTGGGATACATCGGTA+GGG | + | chr3_2:48173576-48173595 | None:intergenic | 45.0% |
| ! | ATGAGTTGGGATACATCGGT+AGG | + | chr3_2:48173577-48173596 | None:intergenic | 45.0% |
| ! | GTTCTAGCTGATCGATGAGT+TGG | + | chr3_2:48173591-48173610 | None:intergenic | 45.0% |
| !! | GTTTGATTTGCAGGCTAGAG+AGG | - | chr3_2:48173957-48173976 | Msa0408380:intron | 45.0% |
| AGGCTAGAGAGGAAATGTGT+AGG | - | chr3_2:48173968-48173987 | Msa0408380:intron | 45.0% | |
| GGCTAGAGAGGAAATGTGTA+GGG | - | chr3_2:48173969-48173988 | Msa0408380:intron | 45.0% | |
| ACTCCGTTATTTGGAAGCCA+CGG | - | chr3_2:48173996-48174015 | Msa0408380:CDS | 45.0% | |
| ATCAAGTCATAGGGCTCAAG+TGG | - | chr3_2:48174159-48174178 | Msa0408380:intron | 45.0% | |
| TGGTTAACGAGCTCCACTTA+AGG | - | chr3_2:48174179-48174198 | Msa0408380:intron | 45.0% | |
| CCCGAACAAGAATCCTTAAG+TGG | + | chr3_2:48174195-48174214 | None:intergenic | 45.0% | |
| GATATGTTTGGATGGAGGAG+AGG | - | chr3_2:48174397-48174416 | Msa0408380:intron | 45.0% | |
| GTCCCATAGTATAACCCTCA+AGG | + | chr3_2:48174608-48174627 | None:intergenic | 45.0% | |
| GGCCGATATTTGACAACACT+GGG | + | chr3_2:48174656-48174675 | None:intergenic | 45.0% | |
| TGGCCGATATTTGACAACAC+TGG | + | chr3_2:48174657-48174676 | None:intergenic | 45.0% | |
| GTGTTGTCAAATATCGGCCA+TGG | - | chr3_2:48174657-48174676 | Msa0408380:intron | 45.0% | |
| TTGTCAAATATCGGCCATGG+TGG | - | chr3_2:48174660-48174679 | Msa0408380:intron | 45.0% | |
| !! | GGATGGCGGAAAGCTAAAAA+TGG | + | chr3_2:48174743-48174762 | None:intergenic | 45.0% |
| ATAGTGTTCTCGATGGAGGA+TGG | + | chr3_2:48174760-48174779 | None:intergenic | 45.0% | |
| CCAAATAGTGTTCTCGATGG+AGG | + | chr3_2:48174764-48174783 | None:intergenic | 45.0% | |
| CCTCCATCGAGAACACTATT+TGG | - | chr3_2:48174761-48174780 | Msa0408380:intron | 45.0% | |
| !! | TTCTGAGGCTATTGCAATGG+TGG | - | chr3_2:48174874-48174893 | Msa0408380:intron | 45.0% |
| GGTGGAATTAGAGATACTGG+CGG | - | chr3_2:48174932-48174951 | Msa0408380:intron | 45.0% | |
| GAGTTCCTTAGTCCAAACTG+TGG | + | chr3_2:48174965-48174984 | None:intergenic | 45.0% | |
| CACCTGTGTGAGAATGTTGT+TGG | - | chr3_2:48175043-48175062 | Msa0408380:intron | 45.0% | |
| TACCTACCTGAGTGCTCTAT+TGG | - | chr3_2:48175741-48175760 | Msa0408380:intron | 45.0% | |
| ACCTACCTGAGTGCTCTATT+GGG | - | chr3_2:48175742-48175761 | Msa0408380:intron | 45.0% | |
| ! | TAAGACCCAATAGAGCACTC+AGG | + | chr3_2:48175750-48175769 | None:intergenic | 45.0% |
| AAGGATAGACCAACTCCTTC+CGG | + | chr3_2:48175896-48175915 | None:intergenic | 45.0% | |
| TTTCCTTAGAGTGAGGACTG+CGG | - | chr3_2:48176031-48176050 | Msa0408380:intron | 45.0% | |
| ACTAACAGAACTGCTTGGAG+TGG | + | chr3_2:48176440-48176459 | None:intergenic | 45.0% | |
| ACTCCAAGCAGTTCTGTTAG+TGG | - | chr3_2:48176439-48176458 | Msa0408380:intron | 45.0% | |
| CTCCAAGCAGTTCTGTTAGT+GGG | - | chr3_2:48176440-48176459 | Msa0408380:intron | 45.0% | |
| TCCAAGCAGTTCTGTTAGTG+GGG | - | chr3_2:48176441-48176460 | Msa0408380:intron | 45.0% | |
| TCTATGGATCCAGTTGAACC+TGG | - | chr3_2:48176481-48176500 | Msa0408380:intron | 45.0% | |
| ! | GGTGTTCCCAATCGTTTTCT+TGG | - | chr3_2:48176511-48176530 | Msa0408380:intron | 45.0% |
| TCAGCAAACACCGTTATCTG+TGG | - | chr3_2:48176567-48176586 | Msa0408380:intron | 45.0% | |
| ATGGGGACATAATGGCCAAT+TGG | - | chr3_2:48176849-48176868 | Msa0408380:intron | 45.0% | |
| AGGATTAACAGGCTACTACC+TGG | - | chr3_2:48177159-48177178 | Msa0408380:intron | 45.0% | |
| CAAGACAGAAGATCGAAACC+AGG | + | chr3_2:48177180-48177199 | None:intergenic | 45.0% | |
| CAAACCAAAGGCCGCAATTT+AGG | + | chr3_2:48177405-48177424 | None:intergenic | 45.0% | |
| CTAAATTGCGGCCTTTGGTT+TGG | - | chr3_2:48177403-48177422 | Msa0408380:intron | 45.0% | |
| CTGCAATGAAGCCAAACCAA+AGG | + | chr3_2:48177417-48177436 | None:intergenic | 45.0% | |
| !! | CAACACAATGAAGGTGTTGG+AGG | + | chr3_2:48177440-48177459 | None:intergenic | 45.0% |
| CTCCAACACCTTCATTGTGT+TGG | - | chr3_2:48177438-48177457 | Msa0408380:intron | 45.0% | |
| ! | AGCCAACACAATGAAGGTGT+TGG | + | chr3_2:48177443-48177462 | None:intergenic | 45.0% |
| CCTCAAAGCCAACACAATGA+AGG | + | chr3_2:48177449-48177468 | None:intergenic | 45.0% | |
| !! | CCTTCATTGTGTTGGCTTTG+AGG | - | chr3_2:48177446-48177465 | Msa0408380:intron | 45.0% |
| !! | TCATTGTGTTGGCTTTGAGG+GGG | - | chr3_2:48177449-48177468 | Msa0408380:intron | 45.0% |
| TAGTCCCACATCGGATAGAT+AGG | - | chr3_2:48177478-48177497 | Msa0408380:intron | 45.0% | |
| GAGTCCTATCTATCCGATGT+GGG | + | chr3_2:48177485-48177504 | None:intergenic | 45.0% | |
| AGAGTCCTATCTATCCGATG+TGG | + | chr3_2:48177486-48177505 | None:intergenic | 45.0% | |
| AGAGAGAGAGAGAGAATGTG+TGG | - | chr3_2:48178145-48178164 | Msa0408380:intron | 45.0% | |
| TCGGTCTCTACGTTATATGG+TGG | - | chr3_2:48178198-48178217 | Msa0408380:intron | 45.0% | |
| GCTGATAACACAACCCAGAA+GGG | - | chr3_2:48178554-48178573 | Msa0408380:intron | 45.0% | |
| ! | CAGAAAGCAGAAGGGGATTT+TGG | - | chr3_2:48178662-48178681 | Msa0408380:CDS | 45.0% |
| AATAAACACACACACGGGGA+GGG | + | chr3_2:48178905-48178924 | None:intergenic | 45.0% | |
| AAATAAACACACACACGGGG+AGG | + | chr3_2:48178906-48178925 | None:intergenic | 45.0% | |
| ACCCAAAAAGGCAGAGGATT+TGG | + | chr3_2:48179356-48179375 | None:intergenic | 45.0% | |
| AAATGGACCCAAAAAGGCAG+AGG | + | chr3_2:48179362-48179381 | None:intergenic | 45.0% | |
| TATCATGTTGCGAGCAGAAC+TGG | + | chr3_2:48179411-48179430 | None:intergenic | 45.0% | |
| ACTCGTTAGTGTAAGTTCCG+TGG | + | chr3_2:48180058-48180077 | None:intergenic | 45.0% | |
| TACCTGCGCTTCATAAGATC+AGG | - | chr3_2:48180081-48180100 | Msa0408380:intron | 45.0% | |
| TACCTGATCTTATGAAGCGC+AGG | + | chr3_2:48180086-48180105 | None:intergenic | 45.0% | |
| !!! | TTTTAGGAGGTATCTCGTCG+AGG | - | chr3_2:48180175-48180194 | Msa0408380:intron | 45.0% |
| CTTGCAATGTCGTCAAAGTG+AGG | + | chr3_2:48181228-48181247 | None:intergenic | 45.0% | |
| CCACCTTGGTTACACAAGAA+TGG | + | chr3_2:48181807-48181826 | None:intergenic | 45.0% | |
| CCATTCTTGTGTAACCAAGG+TGG | - | chr3_2:48181804-48181823 | Msa0408380:five_prime_UTR | 45.0% | |
| !!! | TAATATTTTATTTTGAATTT+TGG | - | chr3_2:48180978-48180997 | Msa0408380:intron | 5.0% |
| TCCACCAAAACGACACCGTT+TGG | - | chr3_2:48173517-48173536 | Msa0408380:three_prime_UTR | 50.0% | |
| !!! | TCCAAACGGTGTCGTTTTGG+TGG | + | chr3_2:48173521-48173540 | None:intergenic | 50.0% |
| ACCCTTCCCCTAGAAACCAT+AGG | - | chr3_2:48174226-48174245 | Msa0408380:intron | 50.0% | |
| ! | CCCTATGGTTTCTAGGGGAA+GGG | + | chr3_2:48174230-48174249 | None:intergenic | 50.0% |
| CCCTTCCCCTAGAAACCATA+GGG | - | chr3_2:48174227-48174246 | Msa0408380:intron | 50.0% | |
| ! | ACCCTATGGTTTCTAGGGGA+AGG | + | chr3_2:48174231-48174250 | None:intergenic | 50.0% |
| TTGGATGGAGGAGAGGACTT+TGG | - | chr3_2:48174404-48174423 | Msa0408380:intron | 50.0% | |
| ATGGAGGAGAGGACTTTGGA+GGG | - | chr3_2:48174408-48174427 | Msa0408380:intron | 50.0% | |
| !! | ATATCGGCCATGGTGGATTG+CGG | - | chr3_2:48174667-48174686 | Msa0408380:intron | 50.0% |
| CCTTCCCAAATTGGCCATGA+AGG | + | chr3_2:48174711-48174730 | None:intergenic | 50.0% | |
| CCTTCATGGCCAATTTGGGA+AGG | - | chr3_2:48174708-48174727 | Msa0408380:intron | 50.0% | |
| !! | GATGTGGTGGATTTGGTTGC+AGG | - | chr3_2:48174844-48174863 | Msa0408380:intron | 50.0% |
| ! | GCCATTTCTGGGTCTAGCAT+CGG | - | chr3_2:48174911-48174930 | Msa0408380:intron | 50.0% |
| ACCGATGCTAGACCCAGAAA+TGG | + | chr3_2:48174915-48174934 | None:intergenic | 50.0% | |
| ! | ATTTCTGGGTCTAGCATCGG+TGG | - | chr3_2:48174914-48174933 | Msa0408380:intron | 50.0% |
| GGCGGTCTTTATCCACAGTT+TGG | - | chr3_2:48174950-48174969 | Msa0408380:intron | 50.0% | |
| TGGACTAAGGAACTCTCCTC+AGG | - | chr3_2:48174970-48174989 | Msa0408380:intron | 50.0% | |
| ! | ACCCAATAGAGCACTCAGGT+AGG | + | chr3_2:48175746-48175765 | None:intergenic | 50.0% |
| TGGAGTCTAATATGCCGACC+TGG | - | chr3_2:48175856-48175875 | Msa0408380:intron | 50.0% | |
| TGTAGGGAATACGACCAGGT+CGG | + | chr3_2:48175873-48175892 | None:intergenic | 50.0% | |
| ACCCCACTAACAGAACTGCT+TGG | + | chr3_2:48176445-48176464 | None:intergenic | 50.0% | |
| GATCCAGTTGAACCTGGAGT+TGG | - | chr3_2:48176487-48176506 | Msa0408380:intron | 50.0% | |
| CATCTTCACGGCTTCCAGAA+AGG | - | chr3_2:48176957-48176976 | Msa0408380:CDS | 50.0% | |
| ! | GGGTGGATTTAGTCCCACAT+CGG | - | chr3_2:48177469-48177488 | Msa0408380:intron | 50.0% |
| !! | CAAAACCGGCTTGTAAGGTG+AGG | + | chr3_2:48177537-48177556 | None:intergenic | 50.0% |
| TGCACAGGCAAATGTAAGCC+AGG | + | chr3_2:48177665-48177684 | None:intergenic | 50.0% | |
| TGCACAGGCAAATGTAAGCC+AGG | + | chr3_2:48177665-48177684 | None:intergenic | 50.0% | |
| AAAGAGAAGAAGCGGCTCTG+AGG | - | chr3_2:48177944-48177963 | Msa0408380:intron | 50.0% | |
| ! | AAGAGAAGAAGCGGCTCTGA+GGG | - | chr3_2:48177945-48177964 | Msa0408380:intron | 50.0% |
| GTTAGCGTCAGCAAGAGAGA+TGG | + | chr3_2:48178043-48178062 | None:intergenic | 50.0% | |
| GGCTGATAACACAACCCAGA+AGG | - | chr3_2:48178553-48178572 | Msa0408380:intron | 50.0% | |
| ! | GGCCGTGAGGACATTTTATG+TGG | - | chr3_2:48178846-48178865 | Msa0408380:CDS | 50.0% |
| GGAGGGAGAAATGTGGTAAC+CGG | + | chr3_2:48178888-48178907 | None:intergenic | 50.0% | |
| GTTGTTGGCCACTAGACCAA+TGG | - | chr3_2:48178930-48178949 | Msa0408380:CDS | 50.0% | |
| CCACTTAGCATCAAAGTGGG+AGG | + | chr3_2:48179829-48179848 | None:intergenic | 50.0% | |
| CCTCCCACTTTGATGCTAAG+TGG | - | chr3_2:48179826-48179845 | Msa0408380:intron | 50.0% | |
| CGTTAGTGTAAGTTCCGTGG+AGG | + | chr3_2:48180055-48180074 | None:intergenic | 50.0% | |
| TACTCGTTTGCGTGAGTACC+AGG | - | chr3_2:48181194-48181213 | Msa0408380:intron | 50.0% | |
| ACTCGTTTGCGTGAGTACCA+GGG | - | chr3_2:48181195-48181214 | Msa0408380:intron | 50.0% | |
| AACTATTCGAATGCACCGCG+AGG | + | chr3_2:48181736-48181755 | None:intergenic | 50.0% | |
| GTTGGGATACATCGGTAGGG+AGG | + | chr3_2:48173573-48173592 | None:intergenic | 55.0% | |
| TCAGCTAGAACGCCACTGCT+TGG | - | chr3_2:48173600-48173619 | Msa0408380:three_prime_UTR | 55.0% | |
| ATCCATCAGGAGCCAAGCAG+TGG | + | chr3_2:48173615-48173634 | None:intergenic | 55.0% | |
| GATGGAGGAGAGGACTTTGG+AGG | - | chr3_2:48174407-48174426 | Msa0408380:intron | 55.0% | |
| !! | GAATTTTGGAGGGGAGGGGT+GGG | + | chr3_2:48174570-48174589 | None:intergenic | 55.0% |
| !! | AGAATTTTGGAGGGGAGGGG+TGG | + | chr3_2:48174571-48174590 | None:intergenic | 55.0% |
| GTGTTCTCGATGGAGGATGG+CGG | + | chr3_2:48174757-48174776 | None:intergenic | 55.0% | |
| CCTGGTCGTATTCCCTACAC+CGG | - | chr3_2:48175874-48175893 | Msa0408380:intron | 55.0% | |
| GTCGTATTCCCTACACCGGA+AGG | - | chr3_2:48175878-48175897 | Msa0408380:intron | 55.0% | |
| TTCCCTACACCGGAAGGAGT+TGG | - | chr3_2:48175884-48175903 | Msa0408380:intron | 55.0% | |
| GACCAACTCCTTCCGGTGTA+GGG | + | chr3_2:48175889-48175908 | None:intergenic | 55.0% | |
| AGACCAACTCCTTCCGGTGT+AGG | + | chr3_2:48175890-48175909 | None:intergenic | 55.0% | |
| CATCCGCAGTCCTCACTCTA+AGG | + | chr3_2:48176037-48176056 | None:intergenic | 55.0% | |
| ! | ACTGGTGCTAGCACTGTCGA+GGG | + | chr3_2:48176380-48176399 | None:intergenic | 55.0% |
| CCACCAACTCCAGGTTCAAC+TGG | + | chr3_2:48176493-48176512 | None:intergenic | 55.0% | |
| CCAGTTGAACCTGGAGTTGG+TGG | - | chr3_2:48176490-48176509 | Msa0408380:intron | 55.0% | |
| TTGGGAACACCACCAACTCC+AGG | + | chr3_2:48176502-48176521 | None:intergenic | 55.0% | |
| TCGTATGTCTCTCGCACGTG+AGG | - | chr3_2:48176732-48176751 | Msa0408380:intron | 55.0% | |
| TCTCTCGCACGTGAGGTAGA+TGG | - | chr3_2:48176739-48176758 | Msa0408380:intron | 55.0% | |
| CTAGGGGCAGACCGCAATAA+AGG | + | chr3_2:48177379-48177398 | None:intergenic | 55.0% | |
| GCCCCTAGTCGCCTAAATTG+CGG | - | chr3_2:48177391-48177410 | Msa0408380:intron | 55.0% | |
| GCCGCAATTTAGGCGACTAG+GGG | + | chr3_2:48177395-48177414 | None:intergenic | 55.0% | |
| GGCCGCAATTTAGGCGACTA+GGG | + | chr3_2:48177396-48177415 | None:intergenic | 55.0% | |
| AGGCCGCAATTTAGGCGACT+AGG | + | chr3_2:48177397-48177416 | None:intergenic | 55.0% | |
| GTCGCCTAAATTGCGGCCTT+TGG | - | chr3_2:48177398-48177417 | Msa0408380:intron | 55.0% | |
| !! | TTGTGTTGGCTTTGAGGGGG+TGG | - | chr3_2:48177452-48177471 | Msa0408380:intron | 55.0% |
| GCACTCCTCACCTTACAAGC+CGG | - | chr3_2:48177529-48177548 | Msa0408380:intron | 55.0% | |
| TCTCGTCGAGGCTACTGAAG+AGG | - | chr3_2:48180187-48180206 | Msa0408380:intron | 55.0% | |
| ACTCACGCAAACGAGTAGCC+TGG | + | chr3_2:48181191-48181210 | None:intergenic | 55.0% | |
| CAAAGTGAGGATCGACACCC+TGG | + | chr3_2:48181215-48181234 | None:intergenic | 55.0% | |
| CCGGTGTAGGGAATACGACC+AGG | + | chr3_2:48175877-48175896 | None:intergenic | 60.0% | |
| ! | CACTGGTGCTAGCACTGTCG+AGG | + | chr3_2:48176381-48176400 | None:intergenic | 60.0% |
| CTCGACAGTGCTAGCACCAG+TGG | - | chr3_2:48176379-48176398 | Msa0408380:intron | 60.0% | |
| !! | GCTTGAGTTGACCACGCCAC+TGG | + | chr3_2:48176398-48176417 | None:intergenic | 60.0% |
| ATTTCCTCGGCGTCTCGTGC+TGG | + | chr3_2:48178780-48178799 | None:intergenic | 60.0% | |
| ! | AGCCTAGTGGTTTGGCCGTG+AGG | - | chr3_2:48178833-48178852 | Msa0408380:CDS | 60.0% |
| GTCCTCACGGCCAAACCACT+AGG | + | chr3_2:48178838-48178857 | None:intergenic | 60.0% | |
| TGGAATCCCGGGTCCGAATC+CGG | - | chr3_2:48178866-48178885 | Msa0408380:intron | 60.0% | |
| TGGTAACCGGATTCGGACCC+GGG | + | chr3_2:48178875-48178894 | None:intergenic | 60.0% | |
| GTGGTAACCGGATTCGGACC+CGG | + | chr3_2:48178876-48178895 | None:intergenic | 60.0% | |
| CACACGGGGAGGGAGAAATG+TGG | + | chr3_2:48178895-48178914 | None:intergenic | 60.0% | |
| CGCCACTGCTTGGCTCCTGA+TGG | - | chr3_2:48173610-48173629 | Msa0408380:three_prime_UTR | 65.0% | |
| !! | TCGGCCATGGTGGATTGCGG+TGG | - | chr3_2:48174670-48174689 | Msa0408380:intron | 65.0% |
| !! | GCCATGGTGGATTGCGGTGG+CGG | - | chr3_2:48174673-48174692 | Msa0408380:intron | 65.0% |
| TCCGCCACCGCAATCCACCA+TGG | + | chr3_2:48174677-48174696 | None:intergenic | 65.0% | |
| CAGTGCTAGCACCAGTGGCG+TGG | - | chr3_2:48176384-48176403 | Msa0408380:intron | 65.0% | |
| AAGACCAGCACGAGACGCCG+AGG | - | chr3_2:48178773-48178792 | Msa0408380:CDS | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3_2 | gene | 48173376 | 48181866 | 48173376 | ID=Msa0408380;Name=Msa0408380 |
| chr3_2 | mRNA | 48173376 | 48181866 | 48173376 | ID=Msa0408380-mRNA-1;Parent=Msa0408380;Name=Msa0408380-mRNA-1;_AED=0.10;_eAED=0.10;_QI=168|0.92|0.85|1|0.84|0.78|14|274|423 |
| chr3_2 | exon | 48173376 | 48173709 | 48173376 | ID=Msa0408380-mRNA-1:exon:9319;Parent=Msa0408380-mRNA-1 |
| chr3_2 | exon | 48173973 | 48174050 | 48173973 | ID=Msa0408380-mRNA-1:exon:9318;Parent=Msa0408380-mRNA-1 |
| chr3_2 | exon | 48175010 | 48175061 | 48175010 | ID=Msa0408380-mRNA-1:exon:9317;Parent=Msa0408380-mRNA-1 |
| chr3_2 | exon | 48175140 | 48175208 | 48175140 | ID=Msa0408380-mRNA-1:exon:9316;Parent=Msa0408380-mRNA-1 |
| chr3_2 | exon | 48176774 | 48176832 | 48176774 | ID=Msa0408380-mRNA-1:exon:9315;Parent=Msa0408380-mRNA-1 |
| chr3_2 | exon | 48176913 | 48176984 | 48176913 | ID=Msa0408380-mRNA-1:exon:9314;Parent=Msa0408380-mRNA-1 |
| chr3_2 | exon | 48177231 | 48177324 | 48177231 | ID=Msa0408380-mRNA-1:exon:9313;Parent=Msa0408380-mRNA-1 |
| chr3_2 | exon | 48178264 | 48178312 | 48178264 | ID=Msa0408380-mRNA-1:exon:9312;Parent=Msa0408380-mRNA-1 |
| chr3_2 | exon | 48178425 | 48178524 | 48178425 | ID=Msa0408380-mRNA-1:exon:9311;Parent=Msa0408380-mRNA-1 |
| chr3_2 | exon | 48178654 | 48178877 | 48178654 | ID=Msa0408380-mRNA-1:exon:9310;Parent=Msa0408380-mRNA-1 |
| chr3_2 | exon | 48178884 | 48178995 | 48178884 | ID=Msa0408380-mRNA-1:exon:9309;Parent=Msa0408380-mRNA-1 |
| chr3_2 | exon | 48180251 | 48180376 | 48180251 | ID=Msa0408380-mRNA-1:exon:9308;Parent=Msa0408380-mRNA-1 |
| chr3_2 | exon | 48181225 | 48181272 | 48181225 | ID=Msa0408380-mRNA-1:exon:9307;Parent=Msa0408380-mRNA-1 |
| chr3_2 | exon | 48181570 | 48181866 | 48181570 | ID=Msa0408380-mRNA-1:exon:9306;Parent=Msa0408380-mRNA-1 |
| chr3_2 | five_prime_UTR | 48181699 | 48181866 | 48181699 | ID=Msa0408380-mRNA-1:five_prime_utr;Parent=Msa0408380-mRNA-1 |
| chr3_2 | CDS | 48181570 | 48181698 | 48181570 | ID=Msa0408380-mRNA-1:cds;Parent=Msa0408380-mRNA-1 |
| chr3_2 | CDS | 48181225 | 48181272 | 48181225 | ID=Msa0408380-mRNA-1:cds;Parent=Msa0408380-mRNA-1 |
| chr3_2 | CDS | 48180251 | 48180376 | 48180251 | ID=Msa0408380-mRNA-1:cds;Parent=Msa0408380-mRNA-1 |
| chr3_2 | CDS | 48178884 | 48178995 | 48178884 | ID=Msa0408380-mRNA-1:cds;Parent=Msa0408380-mRNA-1 |
| chr3_2 | CDS | 48178654 | 48178877 | 48178654 | ID=Msa0408380-mRNA-1:cds;Parent=Msa0408380-mRNA-1 |
| chr3_2 | CDS | 48178425 | 48178524 | 48178425 | ID=Msa0408380-mRNA-1:cds;Parent=Msa0408380-mRNA-1 |
| chr3_2 | CDS | 48178264 | 48178312 | 48178264 | ID=Msa0408380-mRNA-1:cds;Parent=Msa0408380-mRNA-1 |
| chr3_2 | CDS | 48177231 | 48177324 | 48177231 | ID=Msa0408380-mRNA-1:cds;Parent=Msa0408380-mRNA-1 |
| chr3_2 | CDS | 48176913 | 48176984 | 48176913 | ID=Msa0408380-mRNA-1:cds;Parent=Msa0408380-mRNA-1 |
| chr3_2 | CDS | 48176774 | 48176832 | 48176774 | ID=Msa0408380-mRNA-1:cds;Parent=Msa0408380-mRNA-1 |
| chr3_2 | CDS | 48175140 | 48175208 | 48175140 | ID=Msa0408380-mRNA-1:cds;Parent=Msa0408380-mRNA-1 |
| chr3_2 | CDS | 48175010 | 48175061 | 48175010 | ID=Msa0408380-mRNA-1:cds;Parent=Msa0408380-mRNA-1 |
| chr3_2 | CDS | 48173973 | 48174050 | 48173973 | ID=Msa0408380-mRNA-1:cds;Parent=Msa0408380-mRNA-1 |
| chr3_2 | CDS | 48173650 | 48173709 | 48173650 | ID=Msa0408380-mRNA-1:cds;Parent=Msa0408380-mRNA-1 |
| chr3_2 | three_prime_UTR | 48173376 | 48173649 | 48173376 | ID=Msa0408380-mRNA-1:three_prime_utr;Parent=Msa0408380-mRNA-1 |
| Gene Sequence |
| Protein sequence |
