AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0745140

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0745140 MtrunA17_Chr5g0448331 91.396 709 29 2 1 708 1 678 0.0 1272
Msa0745140 MtrunA17_Chr8g0389931 78.736 696 107 6 4 697 1 657 0.0 1082
Msa0745140 MtrunA17_Chr3g0143561 55.252 476 104 7 36 511 25 391 8.83e-174 503
Msa0745140 MtrunA17_Chr6g0470171 63.542 96 27 2 194 289 84 171 6.87e-30 116
Msa0745140 MtrunA17_Chr6g0470171 53.684 95 42 1 50 144 8 100 3.15e-24 100
Msa0745140 MtrunA17_Chr6g0476111 35.789 190 104 7 297 474 223 406 1.55e-21 99.8
Msa0745140 MtrunA17_Chr7g0252211 35.602 191 104 7 297 474 285 469 6.77e-20 94.7
Msa0745140 MtrunA17_Chr6g0470181 62.687 67 20 2 379 443 1 64 9.56e-20 83.6
Msa0745140 MtrunA17_Chr6g0476121 34.211 190 107 6 297 474 172 355 1.12e-19 93.6
Msa0745140 MtrunA17_Chr1g0163051 37.179 156 85 3 297 445 217 366 1.40e-18 90.1
Msa0745140 MtrunA17_Chr4g0003501 34.615 156 85 4 297 446 512 656 1.76e-16 84.0
Msa0745140 MtrunA17_Chr8g0368901 37.342 158 85 4 297 445 325 477 3.15e-16 82.8
Msa0745140 MtrunA17_Chr8g0369301 36.076 158 87 4 297 445 305 457 4.62e-16 82.4
Msa0745140 MtrunA17_Chr8g0368911 34.810 158 89 3 297 445 318 470 1.01e-15 81.3
Msa0745140 MtrunA17_Chr7g0255181 32.716 162 91 4 297 450 263 414 6.80e-15 78.6
Msa0745140 MtrunA17_Chr5g0399801 33.333 153 91 3 297 446 643 787 1.47e-14 77.8
Msa0745140 MtrunA17_Chr1g0163041 34.177 158 89 5 297 445 134 285 9.89e-13 71.2
Msa0745140 MtrunA17_Chr6g0467531 32.911 158 85 5 297 446 137 281 9.67e-12 68.2
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0745140 AT1G57820.1 58.247 673 224 9 7 661 6 639 0.0 773
Msa0745140 AT1G57820.3 58.247 673 224 9 7 661 6 639 0.0 773
Msa0745140 AT1G57820.2 57.801 673 224 10 7 661 6 636 0.0 761
Msa0745140 AT5G39550.1 57.524 638 207 11 4 631 3 586 0.0 708
Msa0745140 AT1G57800.2 54.357 677 270 15 7 666 6 660 0.0 706
Msa0745140 AT1G66050.1 58.347 629 201 10 4 622 3 580 0.0 703
Msa0745140 AT1G66040.1 58.347 629 201 10 4 622 3 580 0.0 702
Msa0745140 AT1G57800.1 53.994 676 270 15 7 666 6 656 0.0 697
Msa0745140 AT4G08590.2 49.227 453 170 9 60 498 24 430 4.72e-145 432
Msa0745140 AT4G08590.1 49.339 454 169 10 60 498 24 431 5.42e-144 429
Msa0745140 AT4G08590.6 48.980 441 164 10 60 485 24 418 1.59e-137 411
Msa0745140 AT4G08590.3 48.276 406 147 11 60 449 24 382 3.54e-119 363
Msa0745140 AT4G08590.4 46.392 388 146 10 60 432 24 364 7.10e-107 330
Msa0745140 AT4G08590.5 46.392 388 146 10 60 432 24 364 7.10e-107 330
Msa0745140 AT5G13960.1 31.429 245 132 8 297 525 153 377 2.12e-18 90.1
Msa0745140 AT5G13960.2 31.429 245 132 8 297 525 19 243 2.26e-18 89.4
Msa0745140 AT2G22740.2 36.774 155 92 3 297 446 334 487 6.22e-18 89.0
Msa0745140 AT2G22740.1 36.774 155 92 3 297 446 334 487 6.22e-18 89.0
Msa0745140 AT2G35160.5 34.375 192 105 7 297 478 333 513 1.81e-16 84.3
Msa0745140 AT2G35160.2 34.375 192 105 7 297 478 369 549 2.25e-16 84.0
Msa0745140 AT2G35160.3 34.375 192 105 7 297 478 369 549 2.25e-16 84.0
Msa0745140 AT2G35160.1 34.375 192 105 7 297 478 369 549 2.25e-16 84.0
Msa0745140 AT2G35160.4 34.375 192 105 7 297 478 369 549 2.25e-16 84.0
Msa0745140 AT5G04940.2 36.970 165 85 6 297 451 215 370 5.62e-16 82.4
Msa0745140 AT5G04940.1 36.970 165 85 6 297 451 215 370 5.62e-16 82.4
Msa0745140 AT2G33290.1 36.943 157 84 5 297 446 211 359 3.52e-15 79.7
Msa0745140 AT2G33290.3 36.943 157 84 5 297 446 211 359 3.52e-15 79.7
Msa0745140 AT2G33290.4 36.943 157 84 5 297 446 211 359 3.52e-15 79.7
Msa0745140 AT2G33290.2 36.943 157 84 5 297 446 211 359 3.52e-15 79.7
Msa0745140 AT4G13460.1 33.333 204 111 7 297 486 209 401 1.47e-14 77.8
Msa0745140 AT4G13460.2 33.333 204 111 7 297 486 209 401 1.47e-14 77.8
Msa0745140 AT1G73100.1 35.032 157 87 5 297 446 212 360 1.02e-11 68.9
Msa0745140 AT1G17770.1 31.707 164 88 5 297 449 231 381 4.12e-11 67.0

Find 215 sgRNAs with CRISPR-Local

Find 346 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
AGAAAGATATTTACTGGATT+TGG 0.158578 5_1:-66242172 Msa0745140:three_prime_UTR
ACTGAAGGATGTTAGATATT+TGG 0.160677 5_1:-66245600 Msa0745140:intron
CCCCATGTTGCTGGCATTGC+TGG 0.208993 5_1:-66244974 Msa0745140:CDS
GCCAACTGTGCGTTGATTCT+TGG 0.223531 5_1:+66245289 None:intergenic
ACTATCCCAAAGGATCATTT+TGG 0.243586 5_1:-66245097 Msa0745140:CDS
GCTGCTGCTCCGTCTGTTGC+GGG 0.276350 5_1:-66246592 Msa0745140:CDS
TATTTACTGGATTTGGGAAT+TGG 0.289664 5_1:-66242165 Msa0745140:three_prime_UTR
AGTTTGAGAAAGATATTTAC+TGG 0.293829 5_1:-66242178 Msa0745140:three_prime_UTR
GAAAGATATTTACTGGATTT+GGG 0.294529 5_1:-66242171 Msa0745140:three_prime_UTR
GAACAGATGGAGGAGAATTC+TGG 0.311936 5_1:-66242582 Msa0745140:CDS
GGCTCAATCTGTCGCTCTCT+CGG 0.312147 5_1:-66244936 Msa0745140:CDS
GGGTTCTTGTTGGTGATACT+TGG 0.318104 5_1:-66245036 Msa0745140:CDS
TAAAATGTGATGTTGTAAAA+TGG 0.323953 5_1:+66246837 None:intergenic
AAGGACGGCTTTATAGCTTT+TGG 0.324277 5_1:+66243703 None:intergenic
AGAACCCCACGGTTCCTATT+AGG 0.346266 5_1:+66245052 None:intergenic
TTTCTGGCCAAAGCTATATC+AGG 0.361815 5_1:-66243422 Msa0745140:CDS
GAGATCCCTTCCACCGCTTC+CGG 0.367014 5_1:+66244868 None:intergenic
GTGATGTTGTAAAATGGTTT+TGG 0.369662 5_1:+66246843 None:intergenic
ATCGGTCCAAAATGATCCTT+TGG 0.370324 5_1:+66245091 None:intergenic
TCGTATCTCACTCCTGCTTC+CGG 0.373745 5_1:+66244527 None:intergenic
TTGATCTGCAGTGATTTAAC+TGG 0.374427 5_1:-66244173 Msa0745140:intron
GTCTACATTTCAGGAGGAAA+AGG 0.376345 5_1:-66243818 Msa0745140:intron
AGAAGGATGAGGTTATTGTT+AGG 0.376741 5_1:-66246468 Msa0745140:CDS
CCCTGTTCCTGATATAGCTT+TGG 0.380875 5_1:+66243415 None:intergenic
GCCAAAGCTATATCAGGAAC+AGG 0.381465 5_1:-66243416 Msa0745140:CDS
TTGCTGAGTATGATCCTAAT+AGG 0.386285 5_1:-66245066 Msa0745140:CDS
ACAGCATGAGTTAATACAAC+AGG 0.395011 5_1:-66242297 Msa0745140:three_prime_UTR
GCTATCCTGTTCGTGTTGTT+AGG 0.395823 5_1:-66244757 Msa0745140:intron
TTTACAACATCATTCATTCA+TGG 0.396882 5_1:-66246818 Msa0745140:exon
GGTGTTCTTGATATCTTTGA+TGG 0.400107 5_1:-66246439 Msa0745140:CDS
TCAGTGGTGTAGCATGTGTC+AGG 0.405321 5_1:+66245172 None:intergenic
TTCATCGGCTTCTTACTTTG+TGG 0.409729 5_1:+66243769 None:intergenic
TCCTGCTTCCGGTGCATAAG+AGG 0.411847 5_1:+66244538 None:intergenic
GAGACCTCGGTCTCTTCATC+CGG 0.413934 5_1:+66242525 None:intergenic
CTAACAATACAAACTTGTTC+AGG 0.415037 5_1:+66245509 None:intergenic
CTTGGATTAGTCGCCATCTT+CGG 0.417258 5_1:+66245307 None:intergenic
GCCATTTCTCAAAACACTTC+AGG 0.422976 5_1:+66245377 None:intergenic
CCTGTTGTTCAGCCTGTCGC+TGG 0.422987 5_1:+66242607 None:intergenic
TCGGCTTCTTACTTTGTGGT+GGG 0.424543 5_1:+66243773 None:intergenic
ACCTACTGTTAAGGAGTTCA+AGG 0.426796 5_1:-66244132 Msa0745140:CDS
ACAGGTTAACAGGGAAATGA+TGG 0.429592 5_1:-66242646 Msa0745140:intron
CCAGCGACAGGCTGAACAAC+AGG 0.433445 5_1:-66242607 Msa0745140:CDS
TAGGATGGAATGTAGGCAAT+GGG 0.434316 5_1:-66245008 Msa0745140:CDS
CAAACTTCTGGTCAAATGAC+TGG 0.435386 5_1:+66244819 None:intergenic
CAACTTCTGCAAAGGCTGCT+TGG 0.436051 5_1:-66243454 Msa0745140:CDS
TCGAGCATTTCACTTGTTGT+TGG 0.442853 5_1:+66246661 None:intergenic
TCACTTGTTGTTGGAACGAC+AGG 0.443054 5_1:+66246670 None:intergenic
CCTTTCTTCTTCTTCTGTGG+AGG 0.445223 5_1:+66242444 None:intergenic
TCACCTTTCTTCTTCTTCTG+TGG 0.446054 5_1:+66242441 None:intergenic
TCCTCTTATGCACCGGAAGC+AGG 0.456225 5_1:-66244539 Msa0745140:CDS
ATCGGCTTCTTACTTTGTGG+TGG 0.457795 5_1:+66243772 None:intergenic
AAACAGTGGCTTGCAATTAG+AGG 0.458150 5_1:-66242359 Msa0745140:exon
TGATACTTGGGAGGATAGGA+TGG 0.459421 5_1:-66245023 Msa0745140:CDS
ATCAACCTTGTCCATGGAGC+TGG 0.459843 5_1:+66244294 None:intergenic
GGTTCTTGTTGGTGATACTT+GGG 0.460044 5_1:-66245035 Msa0745140:CDS
TGCTGCTGCTCCGTCTGTTG+CGG 0.460459 5_1:-66246593 Msa0745140:CDS
TTGCGAACCAGTTGCCGAAA+AGG 0.463278 5_1:-66244779 Msa0745140:CDS
ACCCTCTGCCCTAGCTAGCT+TGG 0.468975 5_1:+66245249 None:intergenic
GAGAAATGTTGGCGCAAAGT+TGG 0.471436 5_1:-66244488 Msa0745140:CDS
ACTGAGAGAGCAAAGAAAAC+AGG 0.475684 5_1:-66245154 Msa0745140:CDS
CTTACAGTAACAGGTCTCTC+AGG 0.475890 5_1:+66246385 None:intergenic
CCCTAGCTAGCTTGGCCATA+CGG 0.475905 5_1:+66245257 None:intergenic
GGCTTCTTACTTTGTGGTGG+GGG 0.477531 5_1:+66243775 None:intergenic
TTCTGCAAAGGCTGCTTGGA+GGG 0.479805 5_1:-66243450 Msa0745140:CDS
ACGAACCTAACAACACGAAC+AGG 0.481034 5_1:+66244752 None:intergenic
CTCAGCTATGTCAGTTGCAC+AGG 0.481756 5_1:+66243338 None:intergenic
GCTCAATCTGTCGCTCTCTC+GGG 0.483213 5_1:-66244935 Msa0745140:CDS
CAATATCTGTCGCAAGGTGT+TGG 0.483430 5_1:-66243505 Msa0745140:CDS
TGAGAATGATCCTTCGTTGA+CGG 0.484846 5_1:-66246542 Msa0745140:CDS
TCGCCCACTACCTACTGTTA+AGG 0.485754 5_1:-66244141 Msa0745140:CDS
GACTGCAATTCCACCGAAGA+TGG 0.491750 5_1:-66245320 Msa0745140:CDS
GATATAGCTTTGGCCAGAAA+AGG 0.492720 5_1:+66243425 None:intergenic
TATGTAGACGACGAGGATCA+TGG 0.492748 5_1:-66244908 Msa0745140:CDS
CTCAGGCAACTGCATACAAA+AGG 0.493682 5_1:+66246402 None:intergenic
GAGGTTATTGTTAGGAGAAG+TGG 0.495866 5_1:-66246460 Msa0745140:CDS
AACTCCTTAACAGTAGGTAG+TGG 0.497268 5_1:+66244137 None:intergenic
TCTACATTTCAGGAGGAAAA+GGG 0.498002 5_1:-66243817 Msa0745140:intron
AGGAAAAGGGCTGTTGGCTG+TGG 0.498699 5_1:-66243804 Msa0745140:CDS
CTCAAAGTGGACGCAGTTTG+CGG 0.499275 5_1:-66243389 Msa0745140:CDS
TCACTTGGTTGAGCACAATC+AGG 0.500895 5_1:+66246628 None:intergenic
TTCCACCGCTTCCGGTGTAA+AGG 0.500920 5_1:+66244876 None:intergenic
TGAGCACAAGGTGTAGTAAG+AGG 0.501591 5_1:+66243477 None:intergenic
GAAGTTTGAAAATATGAATG+AGG 0.501935 5_1:-66244804 Msa0745140:CDS
CAACAAGTGAAATGCTCGAT+TGG 0.502883 5_1:-66246657 Msa0745140:CDS
CGTTGATATTACTGAAAGAA+AGG 0.503780 5_1:-66244105 Msa0745140:CDS
TTGGTGATACTTGGGAGGAT+AGG 0.509145 5_1:-66245027 Msa0745140:CDS
AGAGGAACGTTTCTCCTTGT+GGG 0.509810 5_1:+66244556 None:intergenic
AGGAACCGTGGGGTTCTTGT+TGG 0.510062 5_1:-66245046 Msa0745140:CDS
ATTGCTGGTCAGAGTACCTA+CGG 0.510813 5_1:-66244959 Msa0745140:CDS
AACATGCCATGGTGCTGTGC+AGG 0.512754 5_1:+66246702 None:intergenic
ACCAGCAATGCCAGCAACAT+GGG 0.512898 5_1:+66244973 None:intergenic
AACATATGATAGCTATAGAT+AGG 0.514835 5_1:+66242126 None:intergenic
TGGTTCCTTTACACCGGAAG+CGG 0.515629 5_1:-66244881 Msa0745140:CDS
ATGTAGACGACGAGGATCAT+GGG 0.519044 5_1:-66244907 Msa0745140:CDS
TGAAGTGTTTCGGTTTCTGA+TGG 0.520576 5_1:+66246733 None:intergenic
CTTCTGCAAAGGCTGCTTGG+AGG 0.520625 5_1:-66243451 Msa0745140:CDS
GCTAGGGCAGAGGGTGTTGG+TGG 0.520678 5_1:-66245241 Msa0745140:CDS
AAGAAGAAGAAAGGTGATGA+TGG 0.520820 5_1:-66242435 Msa0745140:CDS
CTGCTGCTCCGTCTGTTGCG+GGG 0.521108 5_1:-66246591 Msa0745140:CDS
AAAGCCGTCCTTCAAAATCA+AGG 0.522404 5_1:-66243692 Msa0745140:CDS
CTATTATTTGCTCAAAGACA+AGG 0.523069 5_1:-66242242 Msa0745140:three_prime_UTR
AACGAACTTGCTCAAACTGC+AGG 0.523430 5_1:-66245342 Msa0745140:CDS
AAAGAAAGGATGATCCATCA+TGG 0.523766 5_1:-66244091 Msa0745140:CDS
GGAAAGGCTAATGCTTGCAG+TGG 0.524369 5_1:-66245133 Msa0745140:CDS
TTCAGGAGGAAAAGGGCTGT+TGG 0.527911 5_1:-66243810 Msa0745140:intron
TATACAGAATTGAGAAATGT+TGG 0.531104 5_1:-66244499 Msa0745140:CDS
TTGCTGGTCAGAGTACCTAC+GGG 0.532070 5_1:-66244958 Msa0745140:CDS
GATAGAATCACTCCAGCGAC+AGG 0.535002 5_1:-66242619 Msa0745140:CDS
AAGAGGAACGTTTCTCCTTG+TGG 0.535286 5_1:+66244555 None:intergenic
CCTCCACAGAAGAAGAAGAA+AGG 0.537509 5_1:-66242444 Msa0745140:CDS
CGGCTTCTTACTTTGTGGTG+GGG 0.538312 5_1:+66243774 None:intergenic
TCGGTCCAAAATGATCCTTT+GGG 0.540321 5_1:+66245092 None:intergenic
TGCTGCTCCGTCTGTTGCGG+GGG 0.540490 5_1:-66246590 Msa0745140:CDS
TTTACACCGGAAGCGGTGGA+AGG 0.542736 5_1:-66244874 Msa0745140:CDS
CTAGCTAGGGCAGAGGGTGT+TGG 0.546860 5_1:-66245244 Msa0745140:CDS
GACCAGCAATGCCAGCAACA+TGG 0.551617 5_1:+66244972 None:intergenic
GATAGGGTCATAAGGTCTGC+AGG 0.554621 5_1:-66244344 Msa0745140:intron
TTGCAGAAGTTGTGAGCACA+AGG 0.559804 5_1:+66243465 None:intergenic
GAGTGAAGAAAATGACAAGC+CGG 0.561110 5_1:-66242544 Msa0745140:CDS
AGGCAGAAATTGTGCCCACA+TGG 0.561703 5_1:+66245397 None:intergenic
GAGCACAAGGTGTAGTAAGA+GGG 0.563587 5_1:+66243478 None:intergenic
TTCTCTTCCTCCGTCAACGA+AGG 0.565587 5_1:+66246532 None:intergenic
TCTTGTTGGTGATACTTGGG+AGG 0.566196 5_1:-66245032 Msa0745140:CDS
ACAAATTGATGAGGCTGGAG+TGG 0.566569 5_1:-66242388 Msa0745140:CDS
GGATTAGTCGCCATCTTCGG+TGG 0.567166 5_1:+66245310 None:intergenic
TTTGAGAAATGGCTTGGGCA+AGG 0.567925 5_1:-66245367 Msa0745140:CDS
GCGGTGGAAGGGATCTCAGT+GGG 0.568471 5_1:-66244862 Msa0745140:CDS
CACCTTCCTTGTGACGCTGA+CGG 0.569974 5_1:-66246781 Msa0745140:CDS
CACTTGTTGTTGGAACGACA+GGG 0.571607 5_1:+66246671 None:intergenic
ATCTTTGAAAGAGAAGGATG+AGG 0.574241 5_1:-66246479 Msa0745140:CDS
CTTACATCAAAGTCCCATGA+TGG 0.576030 5_1:+66244077 None:intergenic
TTCCTTTACACCGGAAGCGG+TGG 0.576676 5_1:-66244878 Msa0745140:CDS
GGGAGGATAGGATGGAATGT+AGG 0.579330 5_1:-66245015 Msa0745140:CDS
CTTTCTTTCAGTAATATCAA+CGG 0.579868 5_1:+66244106 None:intergenic
ATGATCCTAATAGGAACCGT+GGG 0.580583 5_1:-66245057 Msa0745140:CDS
TGGTGGATCTTTGAAAGAGA+AGG 0.582483 5_1:-66246485 Msa0745140:CDS
GAGGAACAAATTGATGAGGC+TGG 0.582753 5_1:-66242393 Msa0745140:CDS
AAGCAGGAGTGAGATACGAT+GGG 0.584452 5_1:-66244523 Msa0745140:CDS
GCTTGCAATTAGAGGTGGAT+CGG 0.585170 5_1:-66242351 Msa0745140:exon
TCTGCAGGTATTTGTTTGTG+AGG 0.586985 5_1:-66244329 Msa0745140:CDS
CGTCCTTCAAAATCAAGGAT+AGG 0.587442 5_1:-66243687 Msa0745140:CDS
GAAACGTTCCTCTTATGCAC+CGG 0.590337 5_1:-66244546 Msa0745140:CDS
CAGTAGGTAGTGGGCGAGGA+CGG 0.590658 5_1:+66244147 None:intergenic
GTGACAATGAGCCAGCTCCA+TGG 0.592691 5_1:-66244305 Msa0745140:CDS
GCCAAGCTAGCTAGGGCAGA+GGG 0.594474 5_1:-66245250 Msa0745140:CDS
ATGAGCCAGCTCCATGGACA+AGG 0.595160 5_1:-66244299 Msa0745140:intron
ATCAAGGATAGGCTATTGAA+AGG 0.595479 5_1:-66243676 Msa0745140:intron
TCCAAGAATCAACGCACAGT+TGG 0.595787 5_1:-66245290 Msa0745140:CDS
ATAGGATGGAATGTAGGCAA+TGG 0.595954 5_1:-66245009 Msa0745140:CDS
AAAGGATCCACAATGTTCAT+CGG 0.596534 5_1:+66243754 None:intergenic
TTACACCGGAAGCGGTGGAA+GGG 0.597699 5_1:-66244873 Msa0745140:CDS
AAGAAAGGATGATCCATCAT+GGG 0.600210 5_1:-66244090 Msa0745140:CDS
CACCGTCAGCGTCACAAGGA+AGG 0.600954 5_1:+66246779 None:intergenic
AGCACAAGGTGTAGTAAGAG+GGG 0.602277 5_1:+66243479 None:intergenic
GTTGGAACGACAGGGAGACA+TGG 0.602579 5_1:+66246679 None:intergenic
CAGTGGCTTGCAATTAGAGG+TGG 0.602583 5_1:-66242356 Msa0745140:exon
ATTCTCAATAGCGCGAATAG+CGG 0.603171 5_1:+66246558 None:intergenic
GAAGCAGGAGTGAGATACGA+TGG 0.604687 5_1:-66244524 Msa0745140:CDS
AGGAACAGGGCGACTCAAAG+TGG 0.605619 5_1:-66243402 Msa0745140:CDS
TGACGCTGACGGTGTATGCA+TGG 0.605697 5_1:-66246770 Msa0745140:CDS
GAAGAAAGGTGATGATGGCA+AGG 0.606822 5_1:-66242430 Msa0745140:CDS
CAGGTTAACAGGGAAATGAT+GGG 0.608219 5_1:-66242645 Msa0745140:CDS
CAATCTGTCGCTCTCTCGGG+TGG 0.608341 5_1:-66244932 Msa0745140:CDS
GGCCAAGCTAGCTAGGGCAG+AGG 0.611782 5_1:-66245251 Msa0745140:CDS
TGTGCTCACAACTTCTGCAA+AGG 0.612302 5_1:-66243462 Msa0745140:CDS
GCAGCAGCAACAACATCACT+TGG 0.612364 5_1:+66246613 None:intergenic
TGAGTATCTTCAGAATCCAC+AGG 0.613570 5_1:-66243319 Msa0745140:intron
TTGTTGGTTCAGACTCCATG+TGG 0.613959 5_1:-66245412 Msa0745140:intron
GGGGAGTGGTTCCTTTACAC+CGG 0.614315 5_1:-66244887 Msa0745140:CDS
CAGTGGTGTAGCATGTGTCA+GGG 0.615057 5_1:+66245173 None:intergenic
GGATCATACTCAGCAAGGAT+CGG 0.615543 5_1:+66245073 None:intergenic
TGGTTGCAATATCTGTCGCA+AGG 0.615751 5_1:-66243511 Msa0745140:CDS
CCGTATGGCCAAGCTAGCTA+GGG 0.621370 5_1:-66245257 Msa0745140:CDS
TAAGAAGCCGATGAACATTG+TGG 0.621417 5_1:-66243761 Msa0745140:CDS
AGGTGATGATGGCAAGGCTG+TGG 0.621772 5_1:-66242424 Msa0745140:CDS
GGGAGACATGGAACATGCCA+TGG 0.622433 5_1:+66246691 None:intergenic
TGAACAACAGGAAGAACAGA+TGG 0.623198 5_1:-66242595 Msa0745140:CDS
CAGCATGAGTTAATACAACA+GGG 0.623416 5_1:-66242296 Msa0745140:three_prime_UTR
TATTAGGATCATACTCAGCA+AGG 0.623524 5_1:+66245068 None:intergenic
GAATGATCCTTCGTTGACGG+AGG 0.625010 5_1:-66246539 Msa0745140:CDS
TGGCAAGGCTGTGGTGAATG+TGG 0.625687 5_1:-66242415 Msa0745140:CDS
ACGACGAGGATCATGGGGAG+TGG 0.626547 5_1:-66244901 Msa0745140:CDS
GAGAGCAAAGAAAACAGGAA+AGG 0.626777 5_1:-66245149 Msa0745140:CDS
TTAACAGTAGGTAGTGGGCG+AGG 0.626993 5_1:+66244143 None:intergenic
GAAAGGCTAATGCTTGCAGT+GGG 0.626997 5_1:-66245132 Msa0745140:CDS
TATGATCCTAATAGGAACCG+TGG 0.637653 5_1:-66245058 Msa0745140:CDS
AATCTTCGTGACTATCCCAA+AGG 0.640437 5_1:-66245107 Msa0745140:CDS
AAGAAACGTCAAGAGTTACA+TGG 0.640610 5_1:-66246505 Msa0745140:CDS
TATTTGGTTCAGGTCCCACA+AGG 0.642027 5_1:-66244570 Msa0745140:intron
CCCTTGAACTCCTTAACAGT+AGG 0.642926 5_1:+66244131 None:intergenic
CGTCAGCGTCACAAGGAAGG+TGG 0.649031 5_1:+66246782 None:intergenic
CCAAAGCTATATCAGGAACA+GGG 0.649568 5_1:-66243415 Msa0745140:CDS
GCTATGTCAGTTGCACAGGT+AGG 0.652259 5_1:+66243342 None:intergenic
GTTGGCGATTGCGATCCGTA+TGG 0.654592 5_1:-66245272 Msa0745140:CDS
TGTAGACGACGAGGATCATG+GGG 0.654974 5_1:-66244906 Msa0745140:CDS
ACTCCTTAACAGTAGGTAGT+GGG 0.656580 5_1:+66244138 None:intergenic
CCAGCAATGCCAGCAACATG+GGG 0.663982 5_1:+66244974 None:intergenic
GCAAAACCTGCACAGCACCA+TGG 0.665753 5_1:-66246708 Msa0745140:CDS
ACAACAGGAAGAACAGATGG+AGG 0.670527 5_1:-66242592 Msa0745140:CDS
TGTTGGTTCAGACTCCATGT+GGG 0.679292 5_1:-66245411 Msa0745140:intron
CATACACCGTCAGCGTCACA+AGG 0.681538 5_1:+66246775 None:intergenic
AGGATGGAATGTAGGCAATG+GGG 0.694397 5_1:-66245007 Msa0745140:CDS
CCTACTGTTAAGGAGTTCAA+GGG 0.697230 5_1:-66244131 Msa0745140:CDS
TGTGGAGGAACAAATTGATG+AGG 0.702307 5_1:-66242397 Msa0745140:CDS
AAACGTCAAGAGTTACATGG+TGG 0.708724 5_1:-66246502 Msa0745140:CDS
TGGAGTGGAAAGCAAAACAG+TGG 0.708838 5_1:-66242373 Msa0745140:CDS
AGCAGGAGTGAGATACGATG+GGG 0.713889 5_1:-66244522 Msa0745140:CDS
CAAGGCTGTGGTGAATGTGG+AGG 0.722052 5_1:-66242412 Msa0745140:CDS
CAAGCCGGATGAAGAGACCG+AGG 0.726337 5_1:-66242529 Msa0745140:CDS
AGTCGTGGAGGAAATTAACG+AGG 0.732114 5_1:-66242478 Msa0745140:CDS
AGCGGTGGAAGGGATCTCAG+TGG 0.736744 5_1:-66244863 Msa0745140:CDS
TATCACCAACAAGAACCCCA+CGG 0.739370 5_1:+66245041 None:intergenic
TGCTGGTCAGAGTACCTACG+GGG 0.755559 5_1:-66244957 Msa0745140:CDS
TGATCCTAATAGGAACCGTG+GGG 0.767429 5_1:-66245056 Msa0745140:CDS
GGGTGGTTATGTAGACGACG+AGG 0.777978 5_1:-66244915 Msa0745140:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! GTAAATTTAAAAAAACAAAA+AGG + chr5_1:66242620-66242639 None:intergenic 10.0%
!! TTCAATTAAAATATAATCAT+TGG + chr5_1:66243131-66243150 None:intergenic 10.0%
!!! CAATTATTAAGTTTAAATTT+TGG - chr5_1:66245031-66245050 Msa0745140:CDS 10.0%
!!! ATATTTGTTTTAATCAATTA+TGG - chr5_1:66245806-66245825 Msa0745140:intron 10.0%
!!! AATCCATTTTAATTAGTAAA+GGG + chr5_1:66243036-66243055 None:intergenic 15.0%
!!! TAATCCATTTTAATTAGTAA+AGG + chr5_1:66243037-66243056 None:intergenic 15.0%
!!! TTAAAATATAATCATTGGTT+AGG + chr5_1:66243126-66243145 None:intergenic 15.0%
!! TAAAATGTGATGTTGTAAAA+TGG + chr5_1:66242122-66242141 None:intergenic 20.0%
!! ACAAAAAGGGTAAAAATTTA+AGG + chr5_1:66242606-66242625 None:intergenic 20.0%
!! TAACAAAAACAAACTAAGTT+AGG + chr5_1:66242904-66242923 None:intergenic 20.0%
!!! TAACTTAGTTTGTTTTTGTT+AGG - chr5_1:66242903-66242922 Msa0745140:intron 20.0%
!!! ATCCATTTTAATTAGTAAAG+GGG + chr5_1:66243035-66243054 None:intergenic 20.0%
!! ATTGAAGTGTGTTAAATATT+TGG - chr5_1:66243145-66243164 Msa0745140:intron 20.0%
!!! TTGAACAATACAAACTTTTT+AGG + chr5_1:66243313-66243332 None:intergenic 20.0%
!!! ACCAATTTAATTTTAACTGA+AGG - chr5_1:66243341-66243360 Msa0745140:CDS 20.0%
!! TCCTTCAGTTAAAATTAAAT+TGG + chr5_1:66243345-66243364 None:intergenic 20.0%
!!! AGAACAACTTGATAATTTTT+TGG + chr5_1:66243751-66243770 None:intergenic 20.0%
!!! TGATTAATTGATTCCTTATT+AGG - chr5_1:66244307-66244326 Msa0745140:CDS 20.0%
!!! AACTTTTATTTTTCCTATCT+GGG - chr5_1:66244696-66244715 Msa0745140:intron 20.0%
!!! TTTTATTAGCCTAGTTTTTA+GGG - chr5_1:66245726-66245745 Msa0745140:intron 20.0%
!! TTAATAATCATATTGATGTC+AGG - chr5_1:66245779-66245798 Msa0745140:intron 20.0%
!! AGATTAGGAATACAATTAAA+AGG + chr5_1:66245871-66245890 None:intergenic 20.0%
!!! TCAATATTTTAAGTACCTAA+AGG + chr5_1:66246050-66246069 None:intergenic 20.0%
!!! TGAAAATGTTTGAAGTTTTT+TGG - chr5_1:66246115-66246134 Msa0745140:intron 20.0%
!!! CTTATTTATGATCTTTTAAC+AGG - chr5_1:66246292-66246311 Msa0745140:intron 20.0%
!!! TTGTAAAATGGTTTTGGTTT+TGG + chr5_1:66242110-66242129 None:intergenic 25.0%
! TTTACAACATCATTCATTCA+TGG - chr5_1:66242138-66242157 Msa0745140:three_prime_UTR 25.0%
! AAAAAAAAGCTTACAGTAAC+AGG + chr5_1:66242583-66242602 None:intergenic 25.0%
! ACTGAAGTGTGTTAAATATT+TGG - chr5_1:66242777-66242796 Msa0745140:intron 25.0%
!!! TCCATTTTAATTAGTAAAGG+GGG + chr5_1:66243034-66243053 None:intergenic 25.0%
!!! AAACTTTTTAGGTCATCTAA+AGG + chr5_1:66243302-66243321 None:intergenic 25.0%
!! CATTCATATTTTCAAACTTC+TGG + chr5_1:66244152-66244171 None:intergenic 25.0%
! GAAGTTTGAAAATATGAATG+AGG - chr5_1:66244152-66244171 Msa0745140:CDS 25.0%
! ACAGATCTAACAAACTAATA+AGG + chr5_1:66244266-66244285 None:intergenic 25.0%
! ACAATGAAACTAACCTAATA+AGG + chr5_1:66244323-66244342 None:intergenic 25.0%
!!! TTGGTATGCTATTTTGTTTA+TGG - chr5_1:66244356-66244375 Msa0745140:intron 25.0%
! TGTTTATGGATCTGTTTATT+TGG - chr5_1:66244370-66244389 Msa0745140:intron 25.0%
! TATACAGAATTGAGAAATGT+TGG - chr5_1:66244457-66244476 Msa0745140:intron 25.0%
! GATAGGAAAAATAAAAGTTG+AGG + chr5_1:66244695-66244714 None:intergenic 25.0%
!!! CAACTTTTATTTTTCCTATC+TGG - chr5_1:66244695-66244714 Msa0745140:intron 25.0%
! AATATATACAAGTGGAAGTA+TGG - chr5_1:66244735-66244754 Msa0745140:intron 25.0%
! CTTTCTTTCAGTAATATCAA+CGG + chr5_1:66244853-66244872 None:intergenic 25.0%
!!! TGTTAATTTGTCTACATTTC+AGG - chr5_1:66245129-66245148 Msa0745140:CDS 25.0%
!! TGAATTTTTGTTGGATCAAA+AGG + chr5_1:66245223-66245242 None:intergenic 25.0%
!! CTGACAATTTGAATTTTTGT+TGG + chr5_1:66245232-66245251 None:intergenic 25.0%
! CAACAAAAATTCAAATTGTC+AGG - chr5_1:66245230-66245249 Msa0745140:CDS 25.0%
!!! TTAATTGTTTTTGCAGAGTT+TGG - chr5_1:66245425-66245444 Msa0745140:intron 25.0%
!!! GTTTTATTAGCCTAGTTTTT+AGG - chr5_1:66245725-66245744 Msa0745140:intron 25.0%
! CAATTAAAAGGAATTCAACA+AGG + chr5_1:66245859-66245878 None:intergenic 25.0%
! GGAAAGTTTCATAGTAAATT+AGG + chr5_1:66245914-66245933 None:intergenic 25.0%
! AGAATTTCACATTCTCAAAA+AGG + chr5_1:66245939-66245958 None:intergenic 25.0%
! TAGTGTTTACTATATTGTCT+TGG - chr5_1:66245976-66245995 Msa0745140:intron 25.0%
! AGTGTTTACTATATTGTCTT+GGG - chr5_1:66245977-66245996 Msa0745140:intron 25.0%
!! ACTTCAAACATTTTCATACA+CGG + chr5_1:66246016-66246035 None:intergenic 25.0%
!!! AAGTTTTTTGGCAAATCTTT+AGG - chr5_1:66246127-66246146 Msa0745140:intron 25.0%
! AGTTTGAGAAAGATATTTAC+TGG - chr5_1:66246778-66246797 Msa0745140:CDS 25.0%
! AGAAAGATATTTACTGGATT+TGG - chr5_1:66246784-66246803 Msa0745140:CDS 25.0%
! GAAAGATATTTACTGGATTT+GGG - chr5_1:66246785-66246804 Msa0745140:CDS 25.0%
!!! TTTGGGAATTGGTTTTTAAT+TGG - chr5_1:66246802-66246821 Msa0745140:CDS 25.0%
! AACATATGATAGCTATAGAT+AGG + chr5_1:66246833-66246852 None:intergenic 25.0%
! GTGATGTTGTAAAATGGTTT+TGG + chr5_1:66242116-66242135 None:intergenic 30.0%
TAACCAAAACAAACTCGATT+AGG + chr5_1:66242732-66242751 None:intergenic 30.0%
!!! TAATCGAGTTTGTTTTGGTT+AGG - chr5_1:66242731-66242750 Msa0745140:intron 30.0%
TTATCTGAACGATTCAATCT+TGG - chr5_1:66242754-66242773 Msa0745140:intron 30.0%
CGATTCAATCTCAAATTACA+AGG + chr5_1:66242872-66242891 None:intergenic 30.0%
!!! TTTGTTTTTGTTAGGTTACC+TGG - chr5_1:66242911-66242930 Msa0745140:intron 30.0%
TCCCCCTTTACTAATTAAAA+TGG - chr5_1:66243030-66243049 Msa0745140:intron 30.0%
ACTGAAGGATGTTAGATATT+TGG - chr5_1:66243356-66243375 Msa0745140:CDS 30.0%
! CTAACAATACAAACTTGTTC+AGG + chr5_1:66243450-66243469 None:intergenic 30.0%
! ATTGAAGCATCTTGAACATT+TGG - chr5_1:66243474-66243493 Msa0745140:CDS 30.0%
!! TTTGTTGTTGTTGTTGTTGT+TGG - chr5_1:66243528-66243547 Msa0745140:intron 30.0%
CATTGTGATATGTGATGAAT+TGG - chr5_1:66244337-66244356 Msa0745140:CDS 30.0%
TGAACAATCGATAATCCATT+AGG + chr5_1:66244560-66244579 None:intergenic 30.0%
! TGTTCAAGCTTTATCATTGA+TGG - chr5_1:66244574-66244593 Msa0745140:intron 30.0%
! GTTCAAGCTTTATCATTGAT+GGG - chr5_1:66244575-66244594 Msa0745140:intron 30.0%
! TTCAAGCTTTATCATTGATG+GGG - chr5_1:66244576-66244595 Msa0745140:intron 30.0%
!!! GGGAATCTTTTTTTGTGATA+GGG - chr5_1:66244596-66244615 Msa0745140:intron 30.0%
!!! TTTTTTGTGATAGGGTCATA+AGG - chr5_1:66244604-66244623 Msa0745140:intron 30.0%
GTTGCACTAATATATACAAG+TGG - chr5_1:66244727-66244746 Msa0745140:intron 30.0%
CGTTGATATTACTGAAAGAA+AGG - chr5_1:66244851-66244870 Msa0745140:CDS 30.0%
! TAATTTGTCTACATTTCAGG+AGG - chr5_1:66245132-66245151 Msa0745140:CDS 30.0%
! ATAGGCTATTGAAAGGTATA+TGG - chr5_1:66245287-66245306 Msa0745140:CDS 30.0%
GAAGTTAATTGTTATCACCA+AGG + chr5_1:66245314-66245333 None:intergenic 30.0%
AAAACACCTTCAAATAACAG+TGG + chr5_1:66245354-66245373 None:intergenic 30.0%
! TGTTAATTCAGTTTTGCCTT+TGG - chr5_1:66245402-66245421 Msa0745140:CDS 30.0%
CTGCAAAAACAATTAACCAA+AGG + chr5_1:66245421-66245440 None:intergenic 30.0%
AATGAAAAGAACTGTCTTGT+TGG - chr5_1:66245690-66245709 Msa0745140:intron 30.0%
TAGTCATTTCATAGCAGATT+AGG + chr5_1:66245886-66245905 None:intergenic 30.0%
TTTCACATTCTCAAAAAGGT+TGG + chr5_1:66245935-66245954 None:intergenic 30.0%
!!! AAGTTTTGTTGCAAACCTTT+AGG - chr5_1:66246032-66246051 Msa0745140:intron 30.0%
! AGTTTTGCTCTACATAAAAG+AGG - chr5_1:66246258-66246277 Msa0745140:intron 30.0%
! TGATCTTTTAACAGGTTAAC+AGG - chr5_1:66246300-66246319 Msa0745140:intron 30.0%
! GATCTTTTAACAGGTTAACA+GGG - chr5_1:66246301-66246320 Msa0745140:intron 30.0%
!!! GGTTCGTGTTGTTTTATTTT+GGG - chr5_1:66246626-66246645 Msa0745140:CDS 30.0%
CTATTATTTGCTCAAAGACA+AGG - chr5_1:66246714-66246733 Msa0745140:CDS 30.0%
TATTTACTGGATTTGGGAAT+TGG - chr5_1:66246791-66246810 Msa0745140:CDS 30.0%
!! GGTTTTGCAATGAAGTGTTT+CGG + chr5_1:66242236-66242255 None:intergenic 35.0%
AAGAAACGTCAAGAGTTACA+TGG - chr5_1:66242451-66242470 Msa0745140:CDS 35.0%
! ATCTTTGAAAGAGAAGGATG+AGG - chr5_1:66242477-66242496 Msa0745140:CDS 35.0%
AGAAGGATGAGGTTATTGTT+AGG - chr5_1:66242488-66242507 Msa0745140:CDS 35.0%
GGTGTTCTTGATATCTTTGA+TGG - chr5_1:66242517-66242536 Msa0745140:CDS 35.0%
!! TGACCTAATCGAGTTTGTTT+TGG - chr5_1:66242726-66242745 Msa0745140:intron 35.0%
AAGTTAAGATTGAATCGTCC+AGG + chr5_1:66242932-66242951 None:intergenic 35.0%
CATCTAAAGGATTCAATCTC+AGG + chr5_1:66243289-66243308 None:intergenic 35.0%
!!! AAGTGTTTTGAGAAATGGCT+TGG - chr5_1:66243583-66243602 Msa0745140:intron 35.0%
!!! AGTGTTTTGAGAAATGGCTT+GGG - chr5_1:66243584-66243603 Msa0745140:intron 35.0%
! ACTATCCCAAAGGATCATTT+TGG - chr5_1:66243859-66243878 Msa0745140:intron 35.0%
TATTAGGATCATACTCAGCA+AGG + chr5_1:66243891-66243910 None:intergenic 35.0%
TTGCTGAGTATGATCCTAAT+AGG - chr5_1:66243890-66243909 Msa0745140:intron 35.0%
! TGGATCTGTTTATTTGGTTC+AGG - chr5_1:66244376-66244395 Msa0745140:intron 35.0%
!!! GGGGAATCTTTTTTTGTGAT+AGG - chr5_1:66244595-66244614 Msa0745140:intron 35.0%
ACAAAAATCAACCTTGTCCA+TGG + chr5_1:66244671-66244690 None:intergenic 35.0%
TTGATCTGCAGTGATTTAAC+TGG - chr5_1:66244783-66244802 Msa0745140:CDS 35.0%
AAAGAAAGGATGATCCATCA+TGG - chr5_1:66244865-66244884 Msa0745140:CDS 35.0%
AAGAAAGGATGATCCATCAT+GGG - chr5_1:66244866-66244885 Msa0745140:CDS 35.0%
!! TTTTGGGAAGATTATTTGCC+AGG - chr5_1:66245048-66245067 Msa0745140:CDS 35.0%
AACTATGGTACAGCAAAGTT+GGG + chr5_1:66245090-66245109 None:intergenic 35.0%
AAACTATGGTACAGCAAAGT+TGG + chr5_1:66245091-66245110 None:intergenic 35.0%
! GCTGTACCATAGTTTTTGTA+AGG - chr5_1:66245096-66245115 Msa0745140:CDS 35.0%
GAGAGACCTTACAAAAACTA+TGG + chr5_1:66245105-66245124 None:intergenic 35.0%
TCTACATTTCAGGAGGAAAA+GGG - chr5_1:66245139-66245158 Msa0745140:CDS 35.0%
AAAGGATCCACAATGTTCAT+CGG + chr5_1:66245205-66245224 None:intergenic 35.0%
!! CTATCCTTGATTTTGAAGGA+CGG + chr5_1:66245271-66245290 None:intergenic 35.0%
! TAGCCTATCCTTGATTTTGA+AGG + chr5_1:66245275-66245294 None:intergenic 35.0%
ATCAAGGATAGGCTATTGAA+AGG - chr5_1:66245280-66245299 Msa0745140:CDS 35.0%
! ATTGAAAGGTATATGGTCCT+TGG - chr5_1:66245294-66245313 Msa0745140:CDS 35.0%
ATAACAGTGGTCTAAGGAAA+AGG + chr5_1:66245341-66245360 None:intergenic 35.0%
CTTCAAATAACAGTGGTCTA+AGG + chr5_1:66245347-66245366 None:intergenic 35.0%
! CTTAGACCACTGTTATTTGA+AGG - chr5_1:66245345-66245364 Msa0745140:CDS 35.0%
!! TGTCTTGTTGGACTTTTAGT+TGG - chr5_1:66245702-66245721 Msa0745140:intron 35.0%
!! GTCTTGTTGGACTTTTAGTT+GGG - chr5_1:66245703-66245722 Msa0745140:intron 35.0%
!!! TTAGCCTAGTTTTTAGGGTT+TGG - chr5_1:66245731-66245750 Msa0745140:intron 35.0%
CAAACCAAACCCTAAAAACT+AGG + chr5_1:66245738-66245757 None:intergenic 35.0%
TGAGAATGTGAAATTCTGTC+TGG - chr5_1:66245942-66245961 Msa0745140:intron 35.0%
AAGAAGAAGAAAGGTGATGA+TGG - chr5_1:66246521-66246540 Msa0745140:CDS 35.0%
!!! CGGTTCGTGTTGTTTTATTT+TGG - chr5_1:66246625-66246644 Msa0745140:CDS 35.0%
ACAGCATGAGTTAATACAAC+AGG - chr5_1:66246659-66246678 Msa0745140:CDS 35.0%
CAGCATGAGTTAATACAACA+GGG - chr5_1:66246660-66246679 Msa0745140:CDS 35.0%
! TGAAGTGTTTCGGTTTCTGA+TGG + chr5_1:66242226-66242245 None:intergenic 40.0%
!! TCGAGCATTTCACTTGTTGT+TGG + chr5_1:66242298-66242317 None:intergenic 40.0%
CAACAAGTGAAATGCTCGAT+TGG - chr5_1:66242299-66242318 Msa0745140:three_prime_UTR 40.0%
ATTCTCAATAGCGCGAATAG+CGG + chr5_1:66242401-66242420 None:intergenic 40.0%
TGAGAATGATCCTTCGTTGA+CGG - chr5_1:66242414-66242433 Msa0745140:CDS 40.0%
AAACGTCAAGAGTTACATGG+TGG - chr5_1:66242454-66242473 Msa0745140:CDS 40.0%
! TGGTGGATCTTTGAAAGAGA+AGG - chr5_1:66242471-66242490 Msa0745140:CDS 40.0%
GAGGTTATTGTTAGGAGAAG+TGG - chr5_1:66242496-66242515 Msa0745140:CDS 40.0%
!!! GCCTGAAGTGTTTTGAGAAA+TGG - chr5_1:66243578-66243597 Msa0745140:intron 40.0%
GCCATTTCTCAAAACACTTC+AGG + chr5_1:66243582-66243601 None:intergenic 40.0%
! TGTTTTCTTTGCTCTCTCAG+TGG + chr5_1:66243803-66243822 None:intergenic 40.0%
ACTGAGAGAGCAAAGAAAAC+AGG - chr5_1:66243802-66243821 Msa0745140:CDS 40.0%
GAGAGCAAAGAAAACAGGAA+AGG - chr5_1:66243807-66243826 Msa0745140:CDS 40.0%
AATCTTCGTGACTATCCCAA+AGG - chr5_1:66243849-66243868 Msa0745140:intron 40.0%
TCGGTCCAAAATGATCCTTT+GGG + chr5_1:66243867-66243886 None:intergenic 40.0%
ATCGGTCCAAAATGATCCTT+TGG + chr5_1:66243868-66243887 None:intergenic 40.0%
TATGATCCTAATAGGAACCG+TGG - chr5_1:66243898-66243917 Msa0745140:intron 40.0%
ATGATCCTAATAGGAACCGT+GGG - chr5_1:66243899-66243918 Msa0745140:intron 40.0%
!! GGTTCTTGTTGGTGATACTT+GGG - chr5_1:66243921-66243940 Msa0745140:intron 40.0%
ATAGGATGGAATGTAGGCAA+TGG - chr5_1:66243947-66243966 Msa0745140:intron 40.0%
TAGGATGGAATGTAGGCAAT+GGG - chr5_1:66243948-66243967 Msa0745140:intron 40.0%
CAAACTTCTGGTCAAATGAC+TGG + chr5_1:66244140-66244159 None:intergenic 40.0%
GTCTCACTCAATGTACTTAC+TGG + chr5_1:66244538-66244557 None:intergenic 40.0%
GTACATTGAGTGAGACCTAA+TGG - chr5_1:66244542-66244561 Msa0745140:CDS 40.0%
TCTGCAGGTATTTGTTTGTG+AGG - chr5_1:66244627-66244646 Msa0745140:intron 40.0%
! TTTTCCTATCTGGGTGTTTG+TGG - chr5_1:66244705-66244724 Msa0745140:intron 40.0%
ACTCCTTAACAGTAGGTAGT+GGG + chr5_1:66244821-66244840 None:intergenic 40.0%
AACTCCTTAACAGTAGGTAG+TGG + chr5_1:66244822-66244841 None:intergenic 40.0%
ACCTACTGTTAAGGAGTTCA+AGG - chr5_1:66244824-66244843 Msa0745140:CDS 40.0%
CCTACTGTTAAGGAGTTCAA+GGG - chr5_1:66244825-66244844 Msa0745140:CDS 40.0%
CTTACATCAAAGTCCCATGA+TGG + chr5_1:66244882-66244901 None:intergenic 40.0%
CAGAAATGTAATACGCAGCA+CGG + chr5_1:66244963-66244982 None:intergenic 40.0%
ACTATGGTACAGCAAAGTTG+GGG + chr5_1:66245089-66245108 None:intergenic 40.0%
GTCTACATTTCAGGAGGAAA+AGG - chr5_1:66245138-66245157 Msa0745140:CDS 40.0%
!! TTCATCGGCTTCTTACTTTG+TGG + chr5_1:66245190-66245209 None:intergenic 40.0%
TAAGAAGCCGATGAACATTG+TGG - chr5_1:66245195-66245214 Msa0745140:CDS 40.0%
!! AAGGACGGCTTTATAGCTTT+TGG + chr5_1:66245256-66245275 None:intergenic 40.0%
AAAGCCGTCCTTCAAAATCA+AGG - chr5_1:66245264-66245283 Msa0745140:CDS 40.0%
CGTCCTTCAAAATCAAGGAT+AGG - chr5_1:66245269-66245288 Msa0745140:CDS 40.0%
!! GATATAGCTTTGGCCAGAAA+AGG + chr5_1:66245534-66245553 None:intergenic 40.0%
! TTTCTGGCCAAAGCTATATC+AGG - chr5_1:66245534-66245553 Msa0745140:CDS 40.0%
CCAAAGCTATATCAGGAACA+GGG - chr5_1:66245541-66245560 Msa0745140:CDS 40.0%
TGAGTATCTTCAGAATCCAC+AGG - chr5_1:66245637-66245656 Msa0745140:intron 40.0%
ACAGGTTAACAGGGAAATGA+TGG - chr5_1:66246310-66246329 Msa0745140:intron 40.0%
CAGGTTAACAGGGAAATGAT+GGG - chr5_1:66246311-66246330 Msa0745140:intron 40.0%
TGAACAACAGGAAGAACAGA+TGG - chr5_1:66246361-66246380 Msa0745140:intron 40.0%
GAGTGAAGAAAATGACAAGC+CGG - chr5_1:66246412-66246431 Msa0745140:CDS 40.0%
!!! ATCAGAGGATTTTGAGACCT+CGG + chr5_1:66246447-66246466 None:intergenic 40.0%
!!! GACTTTTTCACTCGAATCAG+AGG + chr5_1:66246462-66246481 None:intergenic 40.0%
TGATTCGAGTGAAAAAGTCG+TGG - chr5_1:66246463-66246482 Msa0745140:CDS 40.0%
TCACCTTTCTTCTTCTTCTG+TGG + chr5_1:66246518-66246537 None:intergenic 40.0%
TGTGGAGGAACAAATTGATG+AGG - chr5_1:66246559-66246578 Msa0745140:CDS 40.0%
! AAACAGTGGCTTGCAATTAG+AGG - chr5_1:66246597-66246616 Msa0745140:CDS 40.0%
!! CACTTGTTGTTGGAACGACA+GGG + chr5_1:66242288-66242307 None:intergenic 45.0%
!! TCACTTGTTGTTGGAACGAC+AGG + chr5_1:66242289-66242308 None:intergenic 45.0%
TCACTTGGTTGAGCACAATC+AGG + chr5_1:66242331-66242350 None:intergenic 45.0%
CTCAGGCAACTGCATACAAA+AGG + chr5_1:66242557-66242576 None:intergenic 45.0%
CTTACAGTAACAGGTCTCTC+AGG + chr5_1:66242574-66242593 None:intergenic 45.0%
!! TTGTTGGTTCAGACTCCATG+TGG - chr5_1:66243544-66243563 Msa0745140:intron 45.0%
!! TGTTGGTTCAGACTCCATGT+GGG - chr5_1:66243545-66243564 Msa0745140:intron 45.0%
! TTTGAGAAATGGCTTGGGCA+AGG - chr5_1:66243589-66243608 Msa0745140:intron 45.0%
! AACGAACTTGCTCAAACTGC+AGG - chr5_1:66243614-66243633 Msa0745140:intron 45.0%
!! CTTGGATTAGTCGCCATCTT+CGG + chr5_1:66243652-66243671 None:intergenic 45.0%
TCCAAGAATCAACGCACAGT+TGG - chr5_1:66243666-66243685 Msa0745140:intron 45.0%
GAAAGGCTAATGCTTGCAGT+GGG - chr5_1:66243824-66243843 Msa0745140:intron 45.0%
GGATCATACTCAGCAAGGAT+CGG + chr5_1:66243886-66243905 None:intergenic 45.0%
TGATCCTAATAGGAACCGTG+GGG - chr5_1:66243900-66243919 Msa0745140:intron 45.0%
TATCACCAACAAGAACCCCA+CGG + chr5_1:66243918-66243937 None:intergenic 45.0%
!! GGGTTCTTGTTGGTGATACT+TGG - chr5_1:66243920-66243939 Msa0745140:intron 45.0%
!! TCTTGTTGGTGATACTTGGG+AGG - chr5_1:66243924-66243943 Msa0745140:intron 45.0%
! TTGGTGATACTTGGGAGGAT+AGG - chr5_1:66243929-66243948 Msa0745140:intron 45.0%
TGATACTTGGGAGGATAGGA+TGG - chr5_1:66243933-66243952 Msa0745140:intron 45.0%
AGGATGGAATGTAGGCAATG+GGG - chr5_1:66243949-66243968 Msa0745140:intron 45.0%
! ATTGCTGGTCAGAGTACCTA+CGG - chr5_1:66243997-66244016 Msa0745140:intron 45.0%
TATGTAGACGACGAGGATCA+TGG - chr5_1:66244048-66244067 Msa0745140:intron 45.0%
ATGTAGACGACGAGGATCAT+GGG - chr5_1:66244049-66244068 Msa0745140:intron 45.0%
! CACGAACAGGATAGCCTTTT+CGG + chr5_1:66244194-66244213 None:intergenic 45.0%
! GCTATCCTGTTCGTGTTGTT+AGG - chr5_1:66244199-66244218 Msa0745140:intron 45.0%
ACGAACCTAACAACACGAAC+AGG + chr5_1:66244207-66244226 None:intergenic 45.0%
! TATTTGGTTCAGGTCCCACA+AGG - chr5_1:66244386-66244405 Msa0745140:intron 45.0%
AGAGGAACGTTTCTCCTTGT+GGG + chr5_1:66244403-66244422 None:intergenic 45.0%
AAGAGGAACGTTTCTCCTTG+TGG + chr5_1:66244404-66244423 None:intergenic 45.0%
GAAACGTTCCTCTTATGCAC+CGG - chr5_1:66244410-66244429 Msa0745140:intron 45.0%
AAGCAGGAGTGAGATACGAT+GGG - chr5_1:66244433-66244452 Msa0745140:intron 45.0%
GAGAAATGTTGGCGCAAAGT+TGG - chr5_1:66244468-66244487 Msa0745140:intron 45.0%
CCCTTGAACTCCTTAACAGT+AGG + chr5_1:66244828-66244847 None:intergenic 45.0%
AATGTAATACGCAGCACGGA+AGG + chr5_1:66244959-66244978 None:intergenic 45.0%
TCGGCTTCTTACTTTGTGGT+GGG + chr5_1:66245186-66245205 None:intergenic 45.0%
! ATCGGCTTCTTACTTTGTGG+TGG + chr5_1:66245187-66245206 None:intergenic 45.0%
TGGTTGCAATATCTGTCGCA+AGG - chr5_1:66245445-66245464 Msa0745140:intron 45.0%
CAATATCTGTCGCAAGGTGT+TGG - chr5_1:66245451-66245470 Msa0745140:intron 45.0%
AGCACAAGGTGTAGTAAGAG+GGG + chr5_1:66245480-66245499 None:intergenic 45.0%
GAGCACAAGGTGTAGTAAGA+GGG + chr5_1:66245481-66245500 None:intergenic 45.0%
TGAGCACAAGGTGTAGTAAG+AGG + chr5_1:66245482-66245501 None:intergenic 45.0%
TTGCAGAAGTTGTGAGCACA+AGG + chr5_1:66245494-66245513 None:intergenic 45.0%
TGTGCTCACAACTTCTGCAA+AGG - chr5_1:66245494-66245513 Msa0745140:intron 45.0%
GCCAAAGCTATATCAGGAAC+AGG - chr5_1:66245540-66245559 Msa0745140:CDS 45.0%
CCCTGTTCCTGATATAGCTT+TGG + chr5_1:66245544-66245563 None:intergenic 45.0%
AATACGTGCAGTAGTACCTG+TGG + chr5_1:66245656-66245675 None:intergenic 45.0%
ACAACAGGAAGAACAGATGG+AGG - chr5_1:66246364-66246383 Msa0745140:intron 45.0%
GAACAGATGGAGGAGAATTC+TGG - chr5_1:66246374-66246393 Msa0745140:intron 45.0%
TTCGAGTGAAAAAGTCGTGG+AGG - chr5_1:66246466-66246485 Msa0745140:CDS 45.0%
AGTCGTGGAGGAAATTAACG+AGG - chr5_1:66246478-66246497 Msa0745140:CDS 45.0%
CCTTTCTTCTTCTTCTGTGG+AGG + chr5_1:66246515-66246534 None:intergenic 45.0%
CCTCCACAGAAGAAGAAGAA+AGG - chr5_1:66246512-66246531 Msa0745140:CDS 45.0%
!! GAAGAAAGGTGATGATGGCA+AGG - chr5_1:66246526-66246545 Msa0745140:CDS 45.0%
GAGGAACAAATTGATGAGGC+TGG - chr5_1:66246563-66246582 Msa0745140:CDS 45.0%
ACAAATTGATGAGGCTGGAG+TGG - chr5_1:66246568-66246587 Msa0745140:CDS 45.0%
TGGAGTGGAAAGCAAAACAG+TGG - chr5_1:66246583-66246602 Msa0745140:CDS 45.0%
GCTTGCAATTAGAGGTGGAT+CGG - chr5_1:66246605-66246624 Msa0745140:CDS 45.0%
!! TAAATTTAAAAAAACAAAAA+GGG + chr5_1:66242619-66242638 None:intergenic 5.0%
!!! AATTATTAAGTTTAAATTTT+GGG - chr5_1:66245032-66245051 Msa0745140:CDS 5.0%
GCAGCAGCAACAACATCACT+TGG + chr5_1:66242346-66242365 None:intergenic 50.0%
GAATGATCCTTCGTTGACGG+AGG - chr5_1:66242417-66242436 Msa0745140:CDS 50.0%
TTCTCTTCCTCCGTCAACGA+AGG + chr5_1:66242427-66242446 None:intergenic 50.0%
AGGCAGAAATTGTGCCCACA+TGG + chr5_1:66243562-66243581 None:intergenic 50.0%
GACTGCAATTCCACCGAAGA+TGG - chr5_1:66243636-66243655 Msa0745140:intron 50.0%
!! GCCAACTGTGCGTTGATTCT+TGG + chr5_1:66243670-66243689 None:intergenic 50.0%
CAGTGGTGTAGCATGTGTCA+GGG + chr5_1:66243786-66243805 None:intergenic 50.0%
TCAGTGGTGTAGCATGTGTC+AGG + chr5_1:66243787-66243806 None:intergenic 50.0%
GGAAAGGCTAATGCTTGCAG+TGG - chr5_1:66243823-66243842 Msa0745140:intron 50.0%
AGAACCCCACGGTTCCTATT+AGG + chr5_1:66243907-66243926 None:intergenic 50.0%
GGGAGGATAGGATGGAATGT+AGG - chr5_1:66243941-66243960 Msa0745140:intron 50.0%
! GCTCATTTTCCCCATGTTGC+TGG - chr5_1:66243973-66243992 Msa0745140:intron 50.0%
ACCAGCAATGCCAGCAACAT+GGG + chr5_1:66243986-66244005 None:intergenic 50.0%
! TTGCTGGTCAGAGTACCTAC+GGG - chr5_1:66243998-66244017 Msa0745140:intron 50.0%
TGTAGACGACGAGGATCATG+GGG - chr5_1:66244050-66244069 Msa0745140:intron 50.0%
TGGTTCCTTTACACCGGAAG+CGG - chr5_1:66244075-66244094 Msa0745140:intron 50.0%
TTGCGAACCAGTTGCCGAAA+AGG - chr5_1:66244177-66244196 Msa0745140:intron 50.0%
! AGGATAGCCTTTTCGGCAAC+TGG + chr5_1:66244187-66244206 None:intergenic 50.0%
TCGTATCTCACTCCTGCTTC+CGG + chr5_1:66244432-66244451 None:intergenic 50.0%
GAAGCAGGAGTGAGATACGA+TGG - chr5_1:66244432-66244451 Msa0745140:intron 50.0%
AGCAGGAGTGAGATACGATG+GGG - chr5_1:66244434-66244453 Msa0745140:intron 50.0%
GATAGGGTCATAAGGTCTGC+AGG - chr5_1:66244612-66244631 Msa0745140:intron 50.0%
ATCAACCTTGTCCATGGAGC+TGG + chr5_1:66244665-66244684 None:intergenic 50.0%
GCAACCACAAACACCCAGAT+AGG + chr5_1:66244712-66244731 None:intergenic 50.0%
!! TTAACAGTAGGTAGTGGGCG+AGG + chr5_1:66244816-66244835 None:intergenic 50.0%
TCGCCCACTACCTACTGTTA+AGG - chr5_1:66244815-66244834 Msa0745140:CDS 50.0%
GGGAAAAAACGTTCATCGCC+TGG + chr5_1:66245069-66245088 None:intergenic 50.0%
TTCAGGAGGAAAAGGGCTGT+TGG - chr5_1:66245146-66245165 Msa0745140:CDS 50.0%
GGCTTCTTACTTTGTGGTGG+GGG + chr5_1:66245184-66245203 None:intergenic 50.0%
CGGCTTCTTACTTTGTGGTG+GGG + chr5_1:66245185-66245204 None:intergenic 50.0%
CAACTTCTGCAAAGGCTGCT+TGG - chr5_1:66245502-66245521 Msa0745140:intron 50.0%
TTCTGCAAAGGCTGCTTGGA+GGG - chr5_1:66245506-66245525 Msa0745140:intron 50.0%
CTCAAAGTGGACGCAGTTTG+CGG - chr5_1:66245567-66245586 Msa0745140:CDS 50.0%
GCTATGTCAGTTGCACAGGT+AGG + chr5_1:66245617-66245636 None:intergenic 50.0%
CTCAGCTATGTCAGTTGCAC+AGG + chr5_1:66245621-66245640 None:intergenic 50.0%
GATAGAATCACTCCAGCGAC+AGG - chr5_1:66246337-66246356 Msa0745140:intron 50.0%
! CAGTGGCTTGCAATTAGAGG+TGG - chr5_1:66246600-66246619 Msa0745140:CDS 50.0%
CACCTTCCTTGTGACGCTGA+CGG - chr5_1:66242175-66242194 Msa0745140:three_prime_UTR 55.0%
CATACACCGTCAGCGTCACA+AGG + chr5_1:66242184-66242203 None:intergenic 55.0%
TGACGCTGACGGTGTATGCA+TGG - chr5_1:66242186-66242205 Msa0745140:three_prime_UTR 55.0%
GCAAAACCTGCACAGCACCA+TGG - chr5_1:66242248-66242267 Msa0745140:three_prime_UTR 55.0%
!! AACATGCCATGGTGCTGTGC+AGG + chr5_1:66242257-66242276 None:intergenic 55.0%
GGGAGACATGGAACATGCCA+TGG + chr5_1:66242268-66242287 None:intergenic 55.0%
GTTGGAACGACAGGGAGACA+TGG + chr5_1:66242280-66242299 None:intergenic 55.0%
ACAAGATCCCCCGCAACAGA+CGG + chr5_1:66242376-66242395 None:intergenic 55.0%
!! GGATTAGTCGCCATCTTCGG+TGG + chr5_1:66243649-66243668 None:intergenic 55.0%
GTTGGCGATTGCGATCCGTA+TGG - chr5_1:66243684-66243703 Msa0745140:CDS 55.0%
TCCGTATGGCCAAGCTAGCT+AGG - chr5_1:66243698-66243717 Msa0745140:CDS 55.0%
! CCCTAGCTAGCTTGGCCATA+CGG + chr5_1:66243702-66243721 None:intergenic 55.0%
CCGTATGGCCAAGCTAGCTA+GGG - chr5_1:66243699-66243718 Msa0745140:CDS 55.0%
AGGAACCGTGGGGTTCTTGT+TGG - chr5_1:66243910-66243929 Msa0745140:intron 55.0%
CCAGCAATGCCAGCAACATG+GGG + chr5_1:66243985-66244004 None:intergenic 55.0%
GACCAGCAATGCCAGCAACA+TGG + chr5_1:66243987-66244006 None:intergenic 55.0%
! TGCTGGTCAGAGTACCTACG+GGG - chr5_1:66243999-66244018 Msa0745140:intron 55.0%
GGCTCAATCTGTCGCTCTCT+CGG - chr5_1:66244020-66244039 Msa0745140:intron 55.0%
GCTCAATCTGTCGCTCTCTC+GGG - chr5_1:66244021-66244040 Msa0745140:intron 55.0%
GGGTGGTTATGTAGACGACG+AGG - chr5_1:66244041-66244060 Msa0745140:intron 55.0%
GGGGAGTGGTTCCTTTACAC+CGG - chr5_1:66244069-66244088 Msa0745140:intron 55.0%
TTCCTTTACACCGGAAGCGG+TGG - chr5_1:66244078-66244097 Msa0745140:intron 55.0%
TTCCACCGCTTCCGGTGTAA+AGG + chr5_1:66244083-66244102 None:intergenic 55.0%
TTTACACCGGAAGCGGTGGA+AGG - chr5_1:66244082-66244101 Msa0745140:CDS 55.0%
TTACACCGGAAGCGGTGGAA+GGG - chr5_1:66244083-66244102 Msa0745140:CDS 55.0%
TCCTCTTATGCACCGGAAGC+AGG - chr5_1:66244417-66244436 Msa0745140:intron 55.0%
TCCTGCTTCCGGTGCATAAG+AGG + chr5_1:66244421-66244440 None:intergenic 55.0%
GTGACAATGAGCCAGCTCCA+TGG - chr5_1:66244651-66244670 Msa0745140:intron 55.0%
ATGAGCCAGCTCCATGGACA+AGG - chr5_1:66244657-66244676 Msa0745140:intron 55.0%
! AGGAAAAGGGCTGTTGGCTG+TGG - chr5_1:66245152-66245171 Msa0745140:CDS 55.0%
CTTCTGCAAAGGCTGCTTGG+AGG - chr5_1:66245505-66245524 Msa0745140:intron 55.0%
!!! TGCTTGGAGGGTGCCTTTTC+TGG - chr5_1:66245518-66245537 Msa0745140:intron 55.0%
AGGAACAGGGCGACTCAAAG+TGG - chr5_1:66245554-66245573 Msa0745140:CDS 55.0%
GAGACCTCGGTCTCTTCATC+CGG + chr5_1:66246434-66246453 None:intergenic 55.0%
!! AGGTGATGATGGCAAGGCTG+TGG - chr5_1:66246532-66246551 Msa0745140:CDS 55.0%
TGGCAAGGCTGTGGTGAATG+TGG - chr5_1:66246541-66246560 Msa0745140:CDS 55.0%
CAAGGCTGTGGTGAATGTGG+AGG - chr5_1:66246544-66246563 Msa0745140:CDS 55.0%
CGTCAGCGTCACAAGGAAGG+TGG + chr5_1:66242177-66242196 None:intergenic 60.0%
CACCGTCAGCGTCACAAGGA+AGG + chr5_1:66242180-66242199 None:intergenic 60.0%
TGCTGCTGCTCCGTCTGTTG+CGG - chr5_1:66242363-66242382 Msa0745140:CDS 60.0%
GCCAAGCTAGCTAGGGCAGA+GGG - chr5_1:66243706-66243725 Msa0745140:CDS 60.0%
ACCCTCTGCCCTAGCTAGCT+TGG + chr5_1:66243710-66243729 None:intergenic 60.0%
! CTAGCTAGGGCAGAGGGTGT+TGG - chr5_1:66243712-66243731 Msa0745140:CDS 60.0%
CCCCATGTTGCTGGCATTGC+TGG - chr5_1:66243982-66244001 Msa0745140:intron 60.0%
AGCGACAGATTGAGCCCCGT+AGG + chr5_1:66244016-66244035 None:intergenic 60.0%
CAATCTGTCGCTCTCTCGGG+TGG - chr5_1:66244024-66244043 Msa0745140:intron 60.0%
ACGACGAGGATCATGGGGAG+TGG - chr5_1:66244055-66244074 Msa0745140:intron 60.0%
GAGATCCCTTCCACCGCTTC+CGG + chr5_1:66244091-66244110 None:intergenic 60.0%
AGCGGTGGAAGGGATCTCAG+TGG - chr5_1:66244093-66244112 Msa0745140:CDS 60.0%
GCGGTGGAAGGGATCTCAGT+GGG - chr5_1:66244094-66244113 Msa0745140:CDS 60.0%
!! CAGTAGGTAGTGGGCGAGGA+CGG + chr5_1:66244812-66244831 None:intergenic 60.0%
CCTGTTGTTCAGCCTGTCGC+TGG + chr5_1:66246352-66246371 None:intergenic 60.0%
CCAGCGACAGGCTGAACAAC+AGG - chr5_1:66246349-66246368 Msa0745140:intron 60.0%
CAAGCCGGATGAAGAGACCG+AGG - chr5_1:66246427-66246446 Msa0745140:CDS 60.0%
GCTGCTGCTCCGTCTGTTGC+GGG - chr5_1:66242364-66242383 Msa0745140:CDS 65.0%
CTGCTGCTCCGTCTGTTGCG+GGG - chr5_1:66242365-66242384 Msa0745140:CDS 65.0%
TGCTGCTCCGTCTGTTGCGG+GGG - chr5_1:66242366-66242385 Msa0745140:CDS 65.0%
GGCCAAGCTAGCTAGGGCAG+AGG - chr5_1:66243705-66243724 Msa0745140:CDS 65.0%
!! GCTAGGGCAGAGGGTGTTGG+TGG - chr5_1:66243715-66243734 Msa0745140:CDS 65.0%
Chromosome Type Strat End Strand Name
chr5_1 gene 66242085 66246893 66242085 ID=Msa0745140;Name=Msa0745140
chr5_1 mRNA 66242085 66246893 66242085 ID=Msa0745140-mRNA-1;Parent=Msa0745140;Name=Msa0745140-mRNA-1;_AED=0.06;_eAED=0.06;_QI=72|0.75|0.88|0.88|1|1|9|277|708
chr5_1 exon 66242085 66242664 66242085 ID=Msa0745140-mRNA-1:exon:19720;Parent=Msa0745140-mRNA-1
chr5_1 exon 66243320 66243537 66243320 ID=Msa0745140-mRNA-1:exon:19719;Parent=Msa0745140-mRNA-1
chr5_1 exon 66243677 66243827 66243677 ID=Msa0745140-mRNA-1:exon:19718;Parent=Msa0745140-mRNA-1
chr5_1 exon 66244082 66244184 66244082 ID=Msa0745140-mRNA-1:exon:19717;Parent=Msa0745140-mRNA-1
chr5_1 exon 66244300 66244361 66244300 ID=Msa0745140-mRNA-1:exon:19716;Parent=Msa0745140-mRNA-1
chr5_1 exon 66244481 66244580 66244481 ID=Msa0745140-mRNA-1:exon:19715;Parent=Msa0745140-mRNA-1
chr5_1 exon 66244758 66245422 66244758 ID=Msa0745140-mRNA-1:exon:19714;Parent=Msa0745140-mRNA-1
chr5_1 exon 66245523 66245615 66245523 ID=Msa0745140-mRNA-1:exon:19713;Parent=Msa0745140-mRNA-1
chr5_1 exon 66246390 66246893 66246390 ID=Msa0745140-mRNA-1:exon:19712;Parent=Msa0745140-mRNA-1
chr5_1 five_prime_UTR 66246822 66246893 66246822 ID=Msa0745140-mRNA-1:five_prime_utr;Parent=Msa0745140-mRNA-1
chr5_1 CDS 66246390 66246821 66246390 ID=Msa0745140-mRNA-1:cds;Parent=Msa0745140-mRNA-1
chr5_1 CDS 66245523 66245615 66245523 ID=Msa0745140-mRNA-1:cds;Parent=Msa0745140-mRNA-1
chr5_1 CDS 66244758 66245422 66244758 ID=Msa0745140-mRNA-1:cds;Parent=Msa0745140-mRNA-1
chr5_1 CDS 66244481 66244580 66244481 ID=Msa0745140-mRNA-1:cds;Parent=Msa0745140-mRNA-1
chr5_1 CDS 66244300 66244361 66244300 ID=Msa0745140-mRNA-1:cds;Parent=Msa0745140-mRNA-1
chr5_1 CDS 66244082 66244184 66244082 ID=Msa0745140-mRNA-1:cds;Parent=Msa0745140-mRNA-1
chr5_1 CDS 66243677 66243827 66243677 ID=Msa0745140-mRNA-1:cds;Parent=Msa0745140-mRNA-1
chr5_1 CDS 66243320 66243537 66243320 ID=Msa0745140-mRNA-1:cds;Parent=Msa0745140-mRNA-1
chr5_1 CDS 66242362 66242664 66242362 ID=Msa0745140-mRNA-1:cds;Parent=Msa0745140-mRNA-1
chr5_1 three_prime_UTR 66242085 66242361 66242085 ID=Msa0745140-mRNA-1:three_prime_utr;Parent=Msa0745140-mRNA-1
Gene Sequence

>Msa0745140

ATGGCGAACATCACTCACCACCTTCCTTGTGACGCTGACGGTGTATGCATGGTGTGCAAACAAAAACCATCAGAAACCGAAACACTTCATTGCAAAACCTGCACAGCACCATGGCATGTTCCATGTCTCCCTGTCGTTCCAACAACAAGTGAAATGCTCGATTGGTTGTGTCCTGATTGTGCTCAACCAAGTGATGTTGTTGCTGCTGCTGCTGCTCCGTCTGTTGCGGGGGATCTTGTCTCCGCTATTCGCGCTATTGAGAATGATCCTTCGTTGACGGAGGAAGAGAAGAGAAAGAAACGTCAAGAGTTACATGGTGGATCTTTGAAAGAGAAGGATGAGGTTATTGTTAGGAGAAGTGGTGTTCTTGATATCTTTGATGGAAGTCTTAACTGTTCCTTTTGTATGCAGTTGCCTGAGAGACCTGTTACTGATGTTAGATATTTGGTTTTATTATACTTATTATTTGAAATTGAATTTGATTTTGTTGTTGCTGATGACGTTGTTGTCTTGTATCCTGAACAAACTCCATGTGGGCACAATTTCTGCCTGAAGTGTTTTGAGAAATGGCTTGGGCAAGGAAAACGAACTTGCTCAAACTGCAGGACTGCAATTCCACCGAAGATGGCGACTAATCCAAGAATCAACGCACAGTTGGCGATTGCGATCCGTATGGCCAAGCTAGCTAGGGCAGAGGGTGTTGGTGGAAGCACTGCTCCAAAAAATTATCAAGTTGTTCTCAATGATGAGCGCCCTGACACATGCTACACCACTGAGAGAGCAAAGAAAACAGGAAAGGCTAATGCTTGCAGTGGGAAAATCTTCGTGACTATCCCAAAGGATCATTTTGGACCGATCCTTGCTGAGTATGATCCTAATAGGAACCGTGGGGTTCTTGTTGGTGATACTTGGGAGGATAGGATGGAATGTAGGCAATGGGGAGCTCATTTTCCCCATGTTGCTGGCATTGCTGGTCAGAGTACCTACGGGGCTCAATCTGTCGCTCTCTCGGGTGGTTATGTAGACGACGAGGATCATGGGGAGTGGTTCCTTTACACCGGAAGCGGTGGAAGGGATCTCAGTGGGAATAAACGTACGAACAAAAACCAGTCATTTGACCAGAAGTTTGAAAATATGAATGAGGCTTTGCGAACCAGTTGCCGAAAAGGCTATCCTGTTCGTGTTGTTAGGTCCCACAAGGAGAAACGTTCCTCTTATGCACCGGAAGCAGGAGTGAGATACGATGGGGTATACAGAATTGAGAAATGTTGGCGCAAAGTTGGAATACAAGGTCATAAGGTCTGCAGGTATTTGTTTGTGAGGTGTGACAATGAGCCAGCTCCATGGACAAGTGATTTAACTGGAGACCGTCCTCGCCCACTACCTACTGTTAAGGAGTTCAAGGGTGCCGTTGATATTACTGAAAGAAAGGATGATCCATCATGGGACTTTGATGAGGAAAAGGGCTGTTGGCTGTGGAAGAAGCCCCCACCACAAAGTAAGAAGCCGATGAACATTGTGGATCCTTTTGATCCAACAAAAATTCAAATTGTCAGGCCAAAAGCTATAAAGCCGTCCTTCAAAATCAAGGATAGGCTATTGAAAGAGTTTGGTTGCAATATCTGTCGCAAGGTGTTGGCTTCCCCTCTTACTACACCTTGTGCTCACAACTTCTGCAAAGGCTGCTTGGAGGGTGCCTTTTCTGGCCAAAGCTATATCAGGAACAGGGCGACTCAAAGTGGACGCAGTTTGCGGACGCAGAAGAACATTATGAAATGTCCTACCTGTGCAACTGACATAGCTGAGTATCTTCAGAATCCACAGGTTAACAGGGAAATGATGGGTGTGATAGAATCACTCCAGCGACAGGCTGAACAACAGGAAGAACAGATGGAGGAGAATTCTGGAGAATCAAGTGCTAAGAGTGAAGAAAATGACAAGCCGGATGAAGAGACCGAGGTCTCAAAATCCTCTGATTCGAGTGAAAAAGTCGTGGAGGAAATTAACGAGGATGATGTGAATCCTCCACAGAAGAAGAAGAAAGGTGATGATGGCAAGGCTGTGGTGAATGTGGAGGAACAAATTGATGAGGCTGGAGTGGAAAGCAAAACAGTGGCTTGCAATTAG
Protein sequence

>Msa0745140

MANITHHLPCDADGVCMVCKQKPSETETLHCKTCTAPWHVPCLPVVPTTSEMLDWLCPDCAQPSDVVAAAAAPSVAGDLVSAIRAIENDPSLTEEEKRKKRQELHGGSLKEKDEVIVRRSGVLDIFDGSLNCSFCMQLPERPVTDVRYLVLLYLLFEIEFDFVVADDVVVLYPEQTPCGHNFCLKCFEKWLGQGKRTCSNCRTAIPPKMATNPRINAQLAIAIRMAKLARAEGVGGSTAPKNYQVVLNDERPDTCYTTERAKKTGKANACSGKIFVTIPKDHFGPILAEYDPNRNRGVLVGDTWEDRMECRQWGAHFPHVAGIAGQSTYGAQSVALSGGYVDDEDHGEWFLYTGSGGRDLSGNKRTNKNQSFDQKFENMNEALRTSCRKGYPVRVVRSHKEKRSSYAPEAGVRYDGVYRIEKCWRKVGIQGHKVCRYLFVRCDNEPAPWTSDLTGDRPRPLPTVKEFKGAVDITERKDDPSWDFDEEKGCWLWKKPPPQSKKPMNIVDPFDPTKIQIVRPKAIKPSFKIKDRLLKEFGCNICRKVLASPLTTPCAHNFCKGCLEGAFSGQSYIRNRATQSGRSLRTQKNIMKCPTCATDIAEYLQNPQVNREMMGVIESLQRQAEQQEEQMEENSGESSAKSEENDKPDEETEVSKSSDSSEKVVEEINEDDVNPPQKKKKGDDGKAVVNVEEQIDEAGVESKTVACN*