AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0776640

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0776640 MtrunA17_Chr5g0448331 91.396 709 29 2 1 708 1 678 0.0 1272
Msa0776640 MtrunA17_Chr8g0389931 78.736 696 107 6 4 697 1 657 0.0 1082
Msa0776640 MtrunA17_Chr3g0143561 55.252 476 104 7 36 511 25 391 8.83e-174 503
Msa0776640 MtrunA17_Chr6g0470171 63.542 96 27 2 194 289 84 171 6.87e-30 116
Msa0776640 MtrunA17_Chr6g0470171 53.684 95 42 1 50 144 8 100 3.15e-24 100
Msa0776640 MtrunA17_Chr6g0476111 35.789 190 104 7 297 474 223 406 1.55e-21 99.8
Msa0776640 MtrunA17_Chr7g0252211 35.602 191 104 7 297 474 285 469 6.77e-20 94.7
Msa0776640 MtrunA17_Chr6g0470181 62.687 67 20 2 379 443 1 64 9.56e-20 83.6
Msa0776640 MtrunA17_Chr6g0476121 34.211 190 107 6 297 474 172 355 1.12e-19 93.6
Msa0776640 MtrunA17_Chr1g0163051 37.179 156 85 3 297 445 217 366 1.40e-18 90.1
Msa0776640 MtrunA17_Chr4g0003501 34.615 156 85 4 297 446 512 656 1.76e-16 84.0
Msa0776640 MtrunA17_Chr8g0368901 37.342 158 85 4 297 445 325 477 3.15e-16 82.8
Msa0776640 MtrunA17_Chr8g0369301 36.076 158 87 4 297 445 305 457 4.62e-16 82.4
Msa0776640 MtrunA17_Chr8g0368911 34.810 158 89 3 297 445 318 470 1.01e-15 81.3
Msa0776640 MtrunA17_Chr7g0255181 32.716 162 91 4 297 450 263 414 6.80e-15 78.6
Msa0776640 MtrunA17_Chr5g0399801 33.333 153 91 3 297 446 643 787 1.47e-14 77.8
Msa0776640 MtrunA17_Chr1g0163041 34.177 158 89 5 297 445 134 285 9.89e-13 71.2
Msa0776640 MtrunA17_Chr6g0467531 32.911 158 85 5 297 446 137 281 9.67e-12 68.2
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0776640 AT1G57820.1 58.247 673 224 9 7 661 6 639 0.0 773
Msa0776640 AT1G57820.3 58.247 673 224 9 7 661 6 639 0.0 773
Msa0776640 AT1G57820.2 57.801 673 224 10 7 661 6 636 0.0 761
Msa0776640 AT5G39550.1 57.524 638 207 11 4 631 3 586 0.0 708
Msa0776640 AT1G57800.2 54.357 677 270 15 7 666 6 660 0.0 706
Msa0776640 AT1G66050.1 58.347 629 201 10 4 622 3 580 0.0 703
Msa0776640 AT1G66040.1 58.347 629 201 10 4 622 3 580 0.0 702
Msa0776640 AT1G57800.1 53.994 676 270 15 7 666 6 656 0.0 697
Msa0776640 AT4G08590.2 49.227 453 170 9 60 498 24 430 4.72e-145 432
Msa0776640 AT4G08590.1 49.339 454 169 10 60 498 24 431 5.42e-144 429
Msa0776640 AT4G08590.6 48.980 441 164 10 60 485 24 418 1.59e-137 411
Msa0776640 AT4G08590.3 48.276 406 147 11 60 449 24 382 3.54e-119 363
Msa0776640 AT4G08590.4 46.392 388 146 10 60 432 24 364 7.10e-107 330
Msa0776640 AT4G08590.5 46.392 388 146 10 60 432 24 364 7.10e-107 330
Msa0776640 AT5G13960.1 31.429 245 132 8 297 525 153 377 2.12e-18 90.1
Msa0776640 AT5G13960.2 31.429 245 132 8 297 525 19 243 2.26e-18 89.4
Msa0776640 AT2G22740.2 36.774 155 92 3 297 446 334 487 6.22e-18 89.0
Msa0776640 AT2G22740.1 36.774 155 92 3 297 446 334 487 6.22e-18 89.0
Msa0776640 AT2G35160.5 34.375 192 105 7 297 478 333 513 1.81e-16 84.3
Msa0776640 AT2G35160.2 34.375 192 105 7 297 478 369 549 2.25e-16 84.0
Msa0776640 AT2G35160.3 34.375 192 105 7 297 478 369 549 2.25e-16 84.0
Msa0776640 AT2G35160.1 34.375 192 105 7 297 478 369 549 2.25e-16 84.0
Msa0776640 AT2G35160.4 34.375 192 105 7 297 478 369 549 2.25e-16 84.0
Msa0776640 AT5G04940.2 36.970 165 85 6 297 451 215 370 5.62e-16 82.4
Msa0776640 AT5G04940.1 36.970 165 85 6 297 451 215 370 5.62e-16 82.4
Msa0776640 AT2G33290.1 36.943 157 84 5 297 446 211 359 3.52e-15 79.7
Msa0776640 AT2G33290.3 36.943 157 84 5 297 446 211 359 3.52e-15 79.7
Msa0776640 AT2G33290.4 36.943 157 84 5 297 446 211 359 3.52e-15 79.7
Msa0776640 AT2G33290.2 36.943 157 84 5 297 446 211 359 3.52e-15 79.7
Msa0776640 AT4G13460.1 33.333 204 111 7 297 486 209 401 1.47e-14 77.8
Msa0776640 AT4G13460.2 33.333 204 111 7 297 486 209 401 1.47e-14 77.8
Msa0776640 AT1G73100.1 35.032 157 87 5 297 446 212 360 1.02e-11 68.9
Msa0776640 AT1G17770.1 31.707 164 88 5 297 449 231 381 4.12e-11 67.0

Find 215 sgRNAs with CRISPR-Local

Find 346 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
AGAAAGATATTTACTGGATT+TGG 0.158578 5_2:-54998899 Msa0776640:three_prime_UTR
ACTGAAGGATGTTAGATATT+TGG 0.160677 5_2:-55002327 Msa0776640:intron
CCCCATGTTGCTGGCATTGC+TGG 0.208993 5_2:-55001701 Msa0776640:CDS
GCCAACTGTGCGTTGATTCT+TGG 0.223531 5_2:+55002016 None:intergenic
ACTATCCCAAAGGATCATTT+TGG 0.243586 5_2:-55001824 Msa0776640:CDS
GCTGCTGCTCCGTCTGTTGC+GGG 0.276350 5_2:-55003319 Msa0776640:CDS
TATTTACTGGATTTGGGAAT+TGG 0.289664 5_2:-54998892 Msa0776640:three_prime_UTR
AGTTTGAGAAAGATATTTAC+TGG 0.293829 5_2:-54998905 Msa0776640:three_prime_UTR
GAAAGATATTTACTGGATTT+GGG 0.294529 5_2:-54998898 Msa0776640:three_prime_UTR
GAACAGATGGAGGAGAATTC+TGG 0.311936 5_2:-54999309 Msa0776640:CDS
GGCTCAATCTGTCGCTCTCT+CGG 0.312147 5_2:-55001663 Msa0776640:CDS
GGGTTCTTGTTGGTGATACT+TGG 0.318104 5_2:-55001763 Msa0776640:CDS
TAAAATGTGATGTTGTAAAA+TGG 0.323953 5_2:+55003564 None:intergenic
AAGGACGGCTTTATAGCTTT+TGG 0.324277 5_2:+55000430 None:intergenic
AGAACCCCACGGTTCCTATT+AGG 0.346266 5_2:+55001779 None:intergenic
TTTCTGGCCAAAGCTATATC+AGG 0.361815 5_2:-55000149 Msa0776640:CDS
GAGATCCCTTCCACCGCTTC+CGG 0.367014 5_2:+55001595 None:intergenic
GTGATGTTGTAAAATGGTTT+TGG 0.369662 5_2:+55003570 None:intergenic
ATCGGTCCAAAATGATCCTT+TGG 0.370324 5_2:+55001818 None:intergenic
TCGTATCTCACTCCTGCTTC+CGG 0.373745 5_2:+55001254 None:intergenic
TTGATCTGCAGTGATTTAAC+TGG 0.374427 5_2:-55000900 Msa0776640:intron
GTCTACATTTCAGGAGGAAA+AGG 0.376345 5_2:-55000545 Msa0776640:intron
AGAAGGATGAGGTTATTGTT+AGG 0.376741 5_2:-55003195 Msa0776640:CDS
CCCTGTTCCTGATATAGCTT+TGG 0.380875 5_2:+55000142 None:intergenic
GCCAAAGCTATATCAGGAAC+AGG 0.381465 5_2:-55000143 Msa0776640:CDS
TTGCTGAGTATGATCCTAAT+AGG 0.386285 5_2:-55001793 Msa0776640:CDS
ACAGCATGAGTTAATACAAC+AGG 0.395011 5_2:-54999024 Msa0776640:three_prime_UTR
GCTATCCTGTTCGTGTTGTT+AGG 0.395823 5_2:-55001484 Msa0776640:intron
TTTACAACATCATTCATTCA+TGG 0.396882 5_2:-55003545 Msa0776640:exon
GGTGTTCTTGATATCTTTGA+TGG 0.400107 5_2:-55003166 Msa0776640:CDS
TCAGTGGTGTAGCATGTGTC+AGG 0.405321 5_2:+55001899 None:intergenic
TTCATCGGCTTCTTACTTTG+TGG 0.409729 5_2:+55000496 None:intergenic
TCCTGCTTCCGGTGCATAAG+AGG 0.411847 5_2:+55001265 None:intergenic
GAGACCTCGGTCTCTTCATC+CGG 0.413934 5_2:+54999252 None:intergenic
CTAACAATACAAACTTGTTC+AGG 0.415037 5_2:+55002236 None:intergenic
CTTGGATTAGTCGCCATCTT+CGG 0.417258 5_2:+55002034 None:intergenic
GCCATTTCTCAAAACACTTC+AGG 0.422976 5_2:+55002104 None:intergenic
CCTGTTGTTCAGCCTGTCGC+TGG 0.422987 5_2:+54999334 None:intergenic
TCGGCTTCTTACTTTGTGGT+GGG 0.424543 5_2:+55000500 None:intergenic
ACCTACTGTTAAGGAGTTCA+AGG 0.426796 5_2:-55000859 Msa0776640:CDS
ACAGGTTAACAGGGAAATGA+TGG 0.429592 5_2:-54999373 Msa0776640:intron
CCAGCGACAGGCTGAACAAC+AGG 0.433445 5_2:-54999334 Msa0776640:CDS
TAGGATGGAATGTAGGCAAT+GGG 0.434316 5_2:-55001735 Msa0776640:CDS
CAAACTTCTGGTCAAATGAC+TGG 0.435386 5_2:+55001546 None:intergenic
CAACTTCTGCAAAGGCTGCT+TGG 0.436051 5_2:-55000181 Msa0776640:CDS
TCGAGCATTTCACTTGTTGT+TGG 0.442853 5_2:+55003388 None:intergenic
TCACTTGTTGTTGGAACGAC+AGG 0.443054 5_2:+55003397 None:intergenic
CCTTTCTTCTTCTTCTGTGG+AGG 0.445223 5_2:+54999171 None:intergenic
TCACCTTTCTTCTTCTTCTG+TGG 0.446054 5_2:+54999168 None:intergenic
TCCTCTTATGCACCGGAAGC+AGG 0.456225 5_2:-55001266 Msa0776640:CDS
ATCGGCTTCTTACTTTGTGG+TGG 0.457795 5_2:+55000499 None:intergenic
AAACAGTGGCTTGCAATTAG+AGG 0.458150 5_2:-54999086 Msa0776640:exon
TGATACTTGGGAGGATAGGA+TGG 0.459421 5_2:-55001750 Msa0776640:CDS
ATCAACCTTGTCCATGGAGC+TGG 0.459843 5_2:+55001021 None:intergenic
GGTTCTTGTTGGTGATACTT+GGG 0.460044 5_2:-55001762 Msa0776640:CDS
TGCTGCTGCTCCGTCTGTTG+CGG 0.460459 5_2:-55003320 Msa0776640:CDS
TTGCGAACCAGTTGCCGAAA+AGG 0.463278 5_2:-55001506 Msa0776640:CDS
ACCCTCTGCCCTAGCTAGCT+TGG 0.468975 5_2:+55001976 None:intergenic
GAGAAATGTTGGCGCAAAGT+TGG 0.471436 5_2:-55001215 Msa0776640:CDS
ACTGAGAGAGCAAAGAAAAC+AGG 0.475684 5_2:-55001881 Msa0776640:CDS
CTTACAGTAACAGGTCTCTC+AGG 0.475890 5_2:+55003112 None:intergenic
CCCTAGCTAGCTTGGCCATA+CGG 0.475905 5_2:+55001984 None:intergenic
GGCTTCTTACTTTGTGGTGG+GGG 0.477531 5_2:+55000502 None:intergenic
TTCTGCAAAGGCTGCTTGGA+GGG 0.479805 5_2:-55000177 Msa0776640:CDS
ACGAACCTAACAACACGAAC+AGG 0.481034 5_2:+55001479 None:intergenic
CTCAGCTATGTCAGTTGCAC+AGG 0.481756 5_2:+55000065 None:intergenic
GCTCAATCTGTCGCTCTCTC+GGG 0.483213 5_2:-55001662 Msa0776640:CDS
CAATATCTGTCGCAAGGTGT+TGG 0.483430 5_2:-55000232 Msa0776640:CDS
TGAGAATGATCCTTCGTTGA+CGG 0.484846 5_2:-55003269 Msa0776640:CDS
TCGCCCACTACCTACTGTTA+AGG 0.485754 5_2:-55000868 Msa0776640:CDS
GACTGCAATTCCACCGAAGA+TGG 0.491750 5_2:-55002047 Msa0776640:CDS
GATATAGCTTTGGCCAGAAA+AGG 0.492720 5_2:+55000152 None:intergenic
TATGTAGACGACGAGGATCA+TGG 0.492748 5_2:-55001635 Msa0776640:CDS
CTCAGGCAACTGCATACAAA+AGG 0.493682 5_2:+55003129 None:intergenic
GAGGTTATTGTTAGGAGAAG+TGG 0.495866 5_2:-55003187 Msa0776640:CDS
AACTCCTTAACAGTAGGTAG+TGG 0.497268 5_2:+55000864 None:intergenic
TCTACATTTCAGGAGGAAAA+GGG 0.498002 5_2:-55000544 Msa0776640:intron
AGGAAAAGGGCTGTTGGCTG+TGG 0.498699 5_2:-55000531 Msa0776640:CDS
CTCAAAGTGGACGCAGTTTG+CGG 0.499275 5_2:-55000116 Msa0776640:CDS
TCACTTGGTTGAGCACAATC+AGG 0.500895 5_2:+55003355 None:intergenic
TTCCACCGCTTCCGGTGTAA+AGG 0.500920 5_2:+55001603 None:intergenic
TGAGCACAAGGTGTAGTAAG+AGG 0.501591 5_2:+55000204 None:intergenic
GAAGTTTGAAAATATGAATG+AGG 0.501935 5_2:-55001531 Msa0776640:CDS
CAACAAGTGAAATGCTCGAT+TGG 0.502883 5_2:-55003384 Msa0776640:CDS
CGTTGATATTACTGAAAGAA+AGG 0.503780 5_2:-55000832 Msa0776640:CDS
TTGGTGATACTTGGGAGGAT+AGG 0.509145 5_2:-55001754 Msa0776640:CDS
AGAGGAACGTTTCTCCTTGT+GGG 0.509810 5_2:+55001283 None:intergenic
AGGAACCGTGGGGTTCTTGT+TGG 0.510062 5_2:-55001773 Msa0776640:CDS
ATTGCTGGTCAGAGTACCTA+CGG 0.510813 5_2:-55001686 Msa0776640:CDS
AACATGCCATGGTGCTGTGC+AGG 0.512754 5_2:+55003429 None:intergenic
ACCAGCAATGCCAGCAACAT+GGG 0.512898 5_2:+55001700 None:intergenic
AACATATGATAGCTATAGAT+AGG 0.514835 5_2:+54998853 None:intergenic
TGGTTCCTTTACACCGGAAG+CGG 0.515629 5_2:-55001608 Msa0776640:CDS
ATGTAGACGACGAGGATCAT+GGG 0.519044 5_2:-55001634 Msa0776640:CDS
TGAAGTGTTTCGGTTTCTGA+TGG 0.520576 5_2:+55003460 None:intergenic
CTTCTGCAAAGGCTGCTTGG+AGG 0.520625 5_2:-55000178 Msa0776640:CDS
GCTAGGGCAGAGGGTGTTGG+TGG 0.520678 5_2:-55001968 Msa0776640:CDS
AAGAAGAAGAAAGGTGATGA+TGG 0.520820 5_2:-54999162 Msa0776640:CDS
CTGCTGCTCCGTCTGTTGCG+GGG 0.521108 5_2:-55003318 Msa0776640:CDS
AAAGCCGTCCTTCAAAATCA+AGG 0.522404 5_2:-55000419 Msa0776640:CDS
CTATTATTTGCTCAAAGACA+AGG 0.523069 5_2:-54998969 Msa0776640:three_prime_UTR
AACGAACTTGCTCAAACTGC+AGG 0.523430 5_2:-55002069 Msa0776640:CDS
AAAGAAAGGATGATCCATCA+TGG 0.523766 5_2:-55000818 Msa0776640:CDS
GGAAAGGCTAATGCTTGCAG+TGG 0.524369 5_2:-55001860 Msa0776640:CDS
TTCAGGAGGAAAAGGGCTGT+TGG 0.527911 5_2:-55000537 Msa0776640:intron
TATACAGAATTGAGAAATGT+TGG 0.531104 5_2:-55001226 Msa0776640:CDS
TTGCTGGTCAGAGTACCTAC+GGG 0.532070 5_2:-55001685 Msa0776640:CDS
GATAGAATCACTCCAGCGAC+AGG 0.535002 5_2:-54999346 Msa0776640:CDS
AAGAGGAACGTTTCTCCTTG+TGG 0.535286 5_2:+55001282 None:intergenic
CCTCCACAGAAGAAGAAGAA+AGG 0.537509 5_2:-54999171 Msa0776640:CDS
CGGCTTCTTACTTTGTGGTG+GGG 0.538312 5_2:+55000501 None:intergenic
TCGGTCCAAAATGATCCTTT+GGG 0.540321 5_2:+55001819 None:intergenic
TGCTGCTCCGTCTGTTGCGG+GGG 0.540490 5_2:-55003317 Msa0776640:CDS
TTTACACCGGAAGCGGTGGA+AGG 0.542736 5_2:-55001601 Msa0776640:CDS
CTAGCTAGGGCAGAGGGTGT+TGG 0.546860 5_2:-55001971 Msa0776640:CDS
GACCAGCAATGCCAGCAACA+TGG 0.551617 5_2:+55001699 None:intergenic
GATAGGGTCATAAGGTCTGC+AGG 0.554621 5_2:-55001071 Msa0776640:intron
TTGCAGAAGTTGTGAGCACA+AGG 0.559804 5_2:+55000192 None:intergenic
GAGTGAAGAAAATGACAAGC+CGG 0.561110 5_2:-54999271 Msa0776640:CDS
AGGCAGAAATTGTGCCCACA+TGG 0.561703 5_2:+55002124 None:intergenic
GAGCACAAGGTGTAGTAAGA+GGG 0.563587 5_2:+55000205 None:intergenic
TTCTCTTCCTCCGTCAACGA+AGG 0.565587 5_2:+55003259 None:intergenic
TCTTGTTGGTGATACTTGGG+AGG 0.566196 5_2:-55001759 Msa0776640:CDS
ACAAATTGATGAGGCTGGAG+TGG 0.566569 5_2:-54999115 Msa0776640:CDS
GGATTAGTCGCCATCTTCGG+TGG 0.567166 5_2:+55002037 None:intergenic
TTTGAGAAATGGCTTGGGCA+AGG 0.567925 5_2:-55002094 Msa0776640:CDS
GCGGTGGAAGGGATCTCAGT+GGG 0.568471 5_2:-55001589 Msa0776640:CDS
CACCTTCCTTGTGACGCTGA+CGG 0.569974 5_2:-55003508 Msa0776640:CDS
CACTTGTTGTTGGAACGACA+GGG 0.571607 5_2:+55003398 None:intergenic
ATCTTTGAAAGAGAAGGATG+AGG 0.574241 5_2:-55003206 Msa0776640:CDS
CTTACATCAAAGTCCCATGA+TGG 0.576030 5_2:+55000804 None:intergenic
TTCCTTTACACCGGAAGCGG+TGG 0.576676 5_2:-55001605 Msa0776640:CDS
GGGAGGATAGGATGGAATGT+AGG 0.579330 5_2:-55001742 Msa0776640:CDS
CTTTCTTTCAGTAATATCAA+CGG 0.579868 5_2:+55000833 None:intergenic
ATGATCCTAATAGGAACCGT+GGG 0.580583 5_2:-55001784 Msa0776640:CDS
TGGTGGATCTTTGAAAGAGA+AGG 0.582483 5_2:-55003212 Msa0776640:CDS
GAGGAACAAATTGATGAGGC+TGG 0.582753 5_2:-54999120 Msa0776640:CDS
AAGCAGGAGTGAGATACGAT+GGG 0.584452 5_2:-55001250 Msa0776640:CDS
GCTTGCAATTAGAGGTGGAT+CGG 0.585170 5_2:-54999078 Msa0776640:exon
TCTGCAGGTATTTGTTTGTG+AGG 0.586985 5_2:-55001056 Msa0776640:CDS
CGTCCTTCAAAATCAAGGAT+AGG 0.587442 5_2:-55000414 Msa0776640:CDS
GAAACGTTCCTCTTATGCAC+CGG 0.590337 5_2:-55001273 Msa0776640:CDS
CAGTAGGTAGTGGGCGAGGA+CGG 0.590658 5_2:+55000874 None:intergenic
GTGACAATGAGCCAGCTCCA+TGG 0.592691 5_2:-55001032 Msa0776640:CDS
GCCAAGCTAGCTAGGGCAGA+GGG 0.594474 5_2:-55001977 Msa0776640:CDS
ATGAGCCAGCTCCATGGACA+AGG 0.595160 5_2:-55001026 Msa0776640:intron
ATCAAGGATAGGCTATTGAA+AGG 0.595479 5_2:-55000403 Msa0776640:intron
TCCAAGAATCAACGCACAGT+TGG 0.595787 5_2:-55002017 Msa0776640:CDS
ATAGGATGGAATGTAGGCAA+TGG 0.595954 5_2:-55001736 Msa0776640:CDS
AAAGGATCCACAATGTTCAT+CGG 0.596534 5_2:+55000481 None:intergenic
TTACACCGGAAGCGGTGGAA+GGG 0.597699 5_2:-55001600 Msa0776640:CDS
AAGAAAGGATGATCCATCAT+GGG 0.600210 5_2:-55000817 Msa0776640:CDS
CACCGTCAGCGTCACAAGGA+AGG 0.600954 5_2:+55003506 None:intergenic
AGCACAAGGTGTAGTAAGAG+GGG 0.602277 5_2:+55000206 None:intergenic
GTTGGAACGACAGGGAGACA+TGG 0.602579 5_2:+55003406 None:intergenic
CAGTGGCTTGCAATTAGAGG+TGG 0.602583 5_2:-54999083 Msa0776640:exon
ATTCTCAATAGCGCGAATAG+CGG 0.603171 5_2:+55003285 None:intergenic
GAAGCAGGAGTGAGATACGA+TGG 0.604687 5_2:-55001251 Msa0776640:CDS
AGGAACAGGGCGACTCAAAG+TGG 0.605619 5_2:-55000129 Msa0776640:CDS
TGACGCTGACGGTGTATGCA+TGG 0.605697 5_2:-55003497 Msa0776640:CDS
GAAGAAAGGTGATGATGGCA+AGG 0.606822 5_2:-54999157 Msa0776640:CDS
CAGGTTAACAGGGAAATGAT+GGG 0.608219 5_2:-54999372 Msa0776640:CDS
CAATCTGTCGCTCTCTCGGG+TGG 0.608341 5_2:-55001659 Msa0776640:CDS
GGCCAAGCTAGCTAGGGCAG+AGG 0.611782 5_2:-55001978 Msa0776640:CDS
TGTGCTCACAACTTCTGCAA+AGG 0.612302 5_2:-55000189 Msa0776640:CDS
GCAGCAGCAACAACATCACT+TGG 0.612364 5_2:+55003340 None:intergenic
TGAGTATCTTCAGAATCCAC+AGG 0.613570 5_2:-55000046 Msa0776640:intron
TTGTTGGTTCAGACTCCATG+TGG 0.613959 5_2:-55002139 Msa0776640:intron
GGGGAGTGGTTCCTTTACAC+CGG 0.614315 5_2:-55001614 Msa0776640:CDS
CAGTGGTGTAGCATGTGTCA+GGG 0.615057 5_2:+55001900 None:intergenic
GGATCATACTCAGCAAGGAT+CGG 0.615543 5_2:+55001800 None:intergenic
TGGTTGCAATATCTGTCGCA+AGG 0.615751 5_2:-55000238 Msa0776640:CDS
CCGTATGGCCAAGCTAGCTA+GGG 0.621370 5_2:-55001984 Msa0776640:CDS
TAAGAAGCCGATGAACATTG+TGG 0.621417 5_2:-55000488 Msa0776640:CDS
AGGTGATGATGGCAAGGCTG+TGG 0.621772 5_2:-54999151 Msa0776640:CDS
GGGAGACATGGAACATGCCA+TGG 0.622433 5_2:+55003418 None:intergenic
TGAACAACAGGAAGAACAGA+TGG 0.623198 5_2:-54999322 Msa0776640:CDS
CAGCATGAGTTAATACAACA+GGG 0.623416 5_2:-54999023 Msa0776640:three_prime_UTR
TATTAGGATCATACTCAGCA+AGG 0.623524 5_2:+55001795 None:intergenic
GAATGATCCTTCGTTGACGG+AGG 0.625010 5_2:-55003266 Msa0776640:CDS
TGGCAAGGCTGTGGTGAATG+TGG 0.625687 5_2:-54999142 Msa0776640:CDS
ACGACGAGGATCATGGGGAG+TGG 0.626547 5_2:-55001628 Msa0776640:CDS
GAGAGCAAAGAAAACAGGAA+AGG 0.626777 5_2:-55001876 Msa0776640:CDS
TTAACAGTAGGTAGTGGGCG+AGG 0.626993 5_2:+55000870 None:intergenic
GAAAGGCTAATGCTTGCAGT+GGG 0.626997 5_2:-55001859 Msa0776640:CDS
TATGATCCTAATAGGAACCG+TGG 0.637653 5_2:-55001785 Msa0776640:CDS
AATCTTCGTGACTATCCCAA+AGG 0.640437 5_2:-55001834 Msa0776640:CDS
AAGAAACGTCAAGAGTTACA+TGG 0.640610 5_2:-55003232 Msa0776640:CDS
TATTTGGTTCAGGTCCCACA+AGG 0.642027 5_2:-55001297 Msa0776640:intron
CCCTTGAACTCCTTAACAGT+AGG 0.642926 5_2:+55000858 None:intergenic
CGTCAGCGTCACAAGGAAGG+TGG 0.649031 5_2:+55003509 None:intergenic
CCAAAGCTATATCAGGAACA+GGG 0.649568 5_2:-55000142 Msa0776640:CDS
GCTATGTCAGTTGCACAGGT+AGG 0.652259 5_2:+55000069 None:intergenic
GTTGGCGATTGCGATCCGTA+TGG 0.654592 5_2:-55001999 Msa0776640:CDS
TGTAGACGACGAGGATCATG+GGG 0.654974 5_2:-55001633 Msa0776640:CDS
ACTCCTTAACAGTAGGTAGT+GGG 0.656580 5_2:+55000865 None:intergenic
CCAGCAATGCCAGCAACATG+GGG 0.663982 5_2:+55001701 None:intergenic
GCAAAACCTGCACAGCACCA+TGG 0.665753 5_2:-55003435 Msa0776640:CDS
ACAACAGGAAGAACAGATGG+AGG 0.670527 5_2:-54999319 Msa0776640:CDS
TGTTGGTTCAGACTCCATGT+GGG 0.679292 5_2:-55002138 Msa0776640:intron
CATACACCGTCAGCGTCACA+AGG 0.681538 5_2:+55003502 None:intergenic
AGGATGGAATGTAGGCAATG+GGG 0.694397 5_2:-55001734 Msa0776640:CDS
CCTACTGTTAAGGAGTTCAA+GGG 0.697230 5_2:-55000858 Msa0776640:CDS
TGTGGAGGAACAAATTGATG+AGG 0.702307 5_2:-54999124 Msa0776640:CDS
AAACGTCAAGAGTTACATGG+TGG 0.708724 5_2:-55003229 Msa0776640:CDS
TGGAGTGGAAAGCAAAACAG+TGG 0.708838 5_2:-54999100 Msa0776640:CDS
AGCAGGAGTGAGATACGATG+GGG 0.713889 5_2:-55001249 Msa0776640:CDS
CAAGGCTGTGGTGAATGTGG+AGG 0.722052 5_2:-54999139 Msa0776640:CDS
CAAGCCGGATGAAGAGACCG+AGG 0.726337 5_2:-54999256 Msa0776640:CDS
AGTCGTGGAGGAAATTAACG+AGG 0.732114 5_2:-54999205 Msa0776640:CDS
AGCGGTGGAAGGGATCTCAG+TGG 0.736744 5_2:-55001590 Msa0776640:CDS
TATCACCAACAAGAACCCCA+CGG 0.739370 5_2:+55001768 None:intergenic
TGCTGGTCAGAGTACCTACG+GGG 0.755559 5_2:-55001684 Msa0776640:CDS
TGATCCTAATAGGAACCGTG+GGG 0.767429 5_2:-55001783 Msa0776640:CDS
GGGTGGTTATGTAGACGACG+AGG 0.777978 5_2:-55001642 Msa0776640:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! GTAAATTTAAAAAAACAAAA+AGG + chr5_2:54999347-54999366 None:intergenic 10.0%
!! TTCAATTAAAATATAATCAT+TGG + chr5_2:54999858-54999877 None:intergenic 10.0%
!!! CAATTATTAAGTTTAAATTT+TGG - chr5_2:55001758-55001777 Msa0776640:CDS 10.0%
!!! ATATTTGTTTTAATCAATTA+TGG - chr5_2:55002533-55002552 Msa0776640:intron 10.0%
!!! AATCCATTTTAATTAGTAAA+GGG + chr5_2:54999763-54999782 None:intergenic 15.0%
!!! TAATCCATTTTAATTAGTAA+AGG + chr5_2:54999764-54999783 None:intergenic 15.0%
!!! TTAAAATATAATCATTGGTT+AGG + chr5_2:54999853-54999872 None:intergenic 15.0%
!! TAAAATGTGATGTTGTAAAA+TGG + chr5_2:54998849-54998868 None:intergenic 20.0%
!! ACAAAAAGGGTAAAAATTTA+AGG + chr5_2:54999333-54999352 None:intergenic 20.0%
!! TAACAAAAACAAACTAAGTT+AGG + chr5_2:54999631-54999650 None:intergenic 20.0%
!!! TAACTTAGTTTGTTTTTGTT+AGG - chr5_2:54999630-54999649 Msa0776640:intron 20.0%
!!! ATCCATTTTAATTAGTAAAG+GGG + chr5_2:54999762-54999781 None:intergenic 20.0%
!! ATTGAAGTGTGTTAAATATT+TGG - chr5_2:54999872-54999891 Msa0776640:intron 20.0%
!!! TTGAACAATACAAACTTTTT+AGG + chr5_2:55000040-55000059 None:intergenic 20.0%
!!! ACCAATTTAATTTTAACTGA+AGG - chr5_2:55000068-55000087 Msa0776640:CDS 20.0%
!! TCCTTCAGTTAAAATTAAAT+TGG + chr5_2:55000072-55000091 None:intergenic 20.0%
!!! AGAACAACTTGATAATTTTT+TGG + chr5_2:55000478-55000497 None:intergenic 20.0%
!!! TGATTAATTGATTCCTTATT+AGG - chr5_2:55001034-55001053 Msa0776640:CDS 20.0%
!!! AACTTTTATTTTTCCTATCT+GGG - chr5_2:55001423-55001442 Msa0776640:intron 20.0%
!!! TTTTATTAGCCTAGTTTTTA+GGG - chr5_2:55002453-55002472 Msa0776640:intron 20.0%
!! TTAATAATCATATTGATGTC+AGG - chr5_2:55002506-55002525 Msa0776640:intron 20.0%
!! AGATTAGGAATACAATTAAA+AGG + chr5_2:55002598-55002617 None:intergenic 20.0%
!!! TCAATATTTTAAGTACCTAA+AGG + chr5_2:55002777-55002796 None:intergenic 20.0%
!!! TGAAAATGTTTGAAGTTTTT+TGG - chr5_2:55002842-55002861 Msa0776640:intron 20.0%
!!! CTTATTTATGATCTTTTAAC+AGG - chr5_2:55003019-55003038 Msa0776640:intron 20.0%
!!! TTGTAAAATGGTTTTGGTTT+TGG + chr5_2:54998837-54998856 None:intergenic 25.0%
! TTTACAACATCATTCATTCA+TGG - chr5_2:54998865-54998884 Msa0776640:three_prime_UTR 25.0%
! AAAAAAAAGCTTACAGTAAC+AGG + chr5_2:54999310-54999329 None:intergenic 25.0%
! ACTGAAGTGTGTTAAATATT+TGG - chr5_2:54999504-54999523 Msa0776640:intron 25.0%
!!! TCCATTTTAATTAGTAAAGG+GGG + chr5_2:54999761-54999780 None:intergenic 25.0%
!!! AAACTTTTTAGGTCATCTAA+AGG + chr5_2:55000029-55000048 None:intergenic 25.0%
!! CATTCATATTTTCAAACTTC+TGG + chr5_2:55000879-55000898 None:intergenic 25.0%
! GAAGTTTGAAAATATGAATG+AGG - chr5_2:55000879-55000898 Msa0776640:CDS 25.0%
! ACAGATCTAACAAACTAATA+AGG + chr5_2:55000993-55001012 None:intergenic 25.0%
! ACAATGAAACTAACCTAATA+AGG + chr5_2:55001050-55001069 None:intergenic 25.0%
!!! TTGGTATGCTATTTTGTTTA+TGG - chr5_2:55001083-55001102 Msa0776640:intron 25.0%
! TGTTTATGGATCTGTTTATT+TGG - chr5_2:55001097-55001116 Msa0776640:intron 25.0%
! TATACAGAATTGAGAAATGT+TGG - chr5_2:55001184-55001203 Msa0776640:intron 25.0%
! GATAGGAAAAATAAAAGTTG+AGG + chr5_2:55001422-55001441 None:intergenic 25.0%
!!! CAACTTTTATTTTTCCTATC+TGG - chr5_2:55001422-55001441 Msa0776640:intron 25.0%
! AATATATACAAGTGGAAGTA+TGG - chr5_2:55001462-55001481 Msa0776640:intron 25.0%
! CTTTCTTTCAGTAATATCAA+CGG + chr5_2:55001580-55001599 None:intergenic 25.0%
!!! TGTTAATTTGTCTACATTTC+AGG - chr5_2:55001856-55001875 Msa0776640:CDS 25.0%
!! TGAATTTTTGTTGGATCAAA+AGG + chr5_2:55001950-55001969 None:intergenic 25.0%
!! CTGACAATTTGAATTTTTGT+TGG + chr5_2:55001959-55001978 None:intergenic 25.0%
! CAACAAAAATTCAAATTGTC+AGG - chr5_2:55001957-55001976 Msa0776640:CDS 25.0%
!!! TTAATTGTTTTTGCAGAGTT+TGG - chr5_2:55002152-55002171 Msa0776640:intron 25.0%
!!! GTTTTATTAGCCTAGTTTTT+AGG - chr5_2:55002452-55002471 Msa0776640:intron 25.0%
! CAATTAAAAGGAATTCAACA+AGG + chr5_2:55002586-55002605 None:intergenic 25.0%
! GGAAAGTTTCATAGTAAATT+AGG + chr5_2:55002641-55002660 None:intergenic 25.0%
! AGAATTTCACATTCTCAAAA+AGG + chr5_2:55002666-55002685 None:intergenic 25.0%
! TAGTGTTTACTATATTGTCT+TGG - chr5_2:55002703-55002722 Msa0776640:intron 25.0%
! AGTGTTTACTATATTGTCTT+GGG - chr5_2:55002704-55002723 Msa0776640:intron 25.0%
!! ACTTCAAACATTTTCATACA+CGG + chr5_2:55002743-55002762 None:intergenic 25.0%
!!! AAGTTTTTTGGCAAATCTTT+AGG - chr5_2:55002854-55002873 Msa0776640:intron 25.0%
! AGTTTGAGAAAGATATTTAC+TGG - chr5_2:55003505-55003524 Msa0776640:CDS 25.0%
! AGAAAGATATTTACTGGATT+TGG - chr5_2:55003511-55003530 Msa0776640:CDS 25.0%
! GAAAGATATTTACTGGATTT+GGG - chr5_2:55003512-55003531 Msa0776640:CDS 25.0%
!!! TTTGGGAATTGGTTTTTAAT+TGG - chr5_2:55003529-55003548 Msa0776640:CDS 25.0%
! AACATATGATAGCTATAGAT+AGG + chr5_2:55003560-55003579 None:intergenic 25.0%
! GTGATGTTGTAAAATGGTTT+TGG + chr5_2:54998843-54998862 None:intergenic 30.0%
TAACCAAAACAAACTCGATT+AGG + chr5_2:54999459-54999478 None:intergenic 30.0%
!!! TAATCGAGTTTGTTTTGGTT+AGG - chr5_2:54999458-54999477 Msa0776640:intron 30.0%
TTATCTGAACGATTCAATCT+TGG - chr5_2:54999481-54999500 Msa0776640:intron 30.0%
CGATTCAATCTCAAATTACA+AGG + chr5_2:54999599-54999618 None:intergenic 30.0%
!!! TTTGTTTTTGTTAGGTTACC+TGG - chr5_2:54999638-54999657 Msa0776640:intron 30.0%
TCCCCCTTTACTAATTAAAA+TGG - chr5_2:54999757-54999776 Msa0776640:intron 30.0%
ACTGAAGGATGTTAGATATT+TGG - chr5_2:55000083-55000102 Msa0776640:CDS 30.0%
! CTAACAATACAAACTTGTTC+AGG + chr5_2:55000177-55000196 None:intergenic 30.0%
! ATTGAAGCATCTTGAACATT+TGG - chr5_2:55000201-55000220 Msa0776640:CDS 30.0%
!! TTTGTTGTTGTTGTTGTTGT+TGG - chr5_2:55000255-55000274 Msa0776640:intron 30.0%
CATTGTGATATGTGATGAAT+TGG - chr5_2:55001064-55001083 Msa0776640:CDS 30.0%
TGAACAATCGATAATCCATT+AGG + chr5_2:55001287-55001306 None:intergenic 30.0%
! TGTTCAAGCTTTATCATTGA+TGG - chr5_2:55001301-55001320 Msa0776640:intron 30.0%
! GTTCAAGCTTTATCATTGAT+GGG - chr5_2:55001302-55001321 Msa0776640:intron 30.0%
! TTCAAGCTTTATCATTGATG+GGG - chr5_2:55001303-55001322 Msa0776640:intron 30.0%
!!! GGGAATCTTTTTTTGTGATA+GGG - chr5_2:55001323-55001342 Msa0776640:intron 30.0%
!!! TTTTTTGTGATAGGGTCATA+AGG - chr5_2:55001331-55001350 Msa0776640:intron 30.0%
GTTGCACTAATATATACAAG+TGG - chr5_2:55001454-55001473 Msa0776640:intron 30.0%
CGTTGATATTACTGAAAGAA+AGG - chr5_2:55001578-55001597 Msa0776640:CDS 30.0%
! TAATTTGTCTACATTTCAGG+AGG - chr5_2:55001859-55001878 Msa0776640:CDS 30.0%
! ATAGGCTATTGAAAGGTATA+TGG - chr5_2:55002014-55002033 Msa0776640:CDS 30.0%
GAAGTTAATTGTTATCACCA+AGG + chr5_2:55002041-55002060 None:intergenic 30.0%
AAAACACCTTCAAATAACAG+TGG + chr5_2:55002081-55002100 None:intergenic 30.0%
! TGTTAATTCAGTTTTGCCTT+TGG - chr5_2:55002129-55002148 Msa0776640:CDS 30.0%
CTGCAAAAACAATTAACCAA+AGG + chr5_2:55002148-55002167 None:intergenic 30.0%
AATGAAAAGAACTGTCTTGT+TGG - chr5_2:55002417-55002436 Msa0776640:intron 30.0%
TAGTCATTTCATAGCAGATT+AGG + chr5_2:55002613-55002632 None:intergenic 30.0%
TTTCACATTCTCAAAAAGGT+TGG + chr5_2:55002662-55002681 None:intergenic 30.0%
!!! AAGTTTTGTTGCAAACCTTT+AGG - chr5_2:55002759-55002778 Msa0776640:intron 30.0%
! AGTTTTGCTCTACATAAAAG+AGG - chr5_2:55002985-55003004 Msa0776640:intron 30.0%
! TGATCTTTTAACAGGTTAAC+AGG - chr5_2:55003027-55003046 Msa0776640:intron 30.0%
! GATCTTTTAACAGGTTAACA+GGG - chr5_2:55003028-55003047 Msa0776640:intron 30.0%
!!! GGTTCGTGTTGTTTTATTTT+GGG - chr5_2:55003353-55003372 Msa0776640:CDS 30.0%
CTATTATTTGCTCAAAGACA+AGG - chr5_2:55003441-55003460 Msa0776640:CDS 30.0%
TATTTACTGGATTTGGGAAT+TGG - chr5_2:55003518-55003537 Msa0776640:CDS 30.0%
!! GGTTTTGCAATGAAGTGTTT+CGG + chr5_2:54998963-54998982 None:intergenic 35.0%
AAGAAACGTCAAGAGTTACA+TGG - chr5_2:54999178-54999197 Msa0776640:CDS 35.0%
! ATCTTTGAAAGAGAAGGATG+AGG - chr5_2:54999204-54999223 Msa0776640:CDS 35.0%
AGAAGGATGAGGTTATTGTT+AGG - chr5_2:54999215-54999234 Msa0776640:CDS 35.0%
GGTGTTCTTGATATCTTTGA+TGG - chr5_2:54999244-54999263 Msa0776640:CDS 35.0%
!! TGACCTAATCGAGTTTGTTT+TGG - chr5_2:54999453-54999472 Msa0776640:intron 35.0%
AAGTTAAGATTGAATCGTCC+AGG + chr5_2:54999659-54999678 None:intergenic 35.0%
CATCTAAAGGATTCAATCTC+AGG + chr5_2:55000016-55000035 None:intergenic 35.0%
!!! AAGTGTTTTGAGAAATGGCT+TGG - chr5_2:55000310-55000329 Msa0776640:intron 35.0%
!!! AGTGTTTTGAGAAATGGCTT+GGG - chr5_2:55000311-55000330 Msa0776640:intron 35.0%
! ACTATCCCAAAGGATCATTT+TGG - chr5_2:55000586-55000605 Msa0776640:intron 35.0%
TATTAGGATCATACTCAGCA+AGG + chr5_2:55000618-55000637 None:intergenic 35.0%
TTGCTGAGTATGATCCTAAT+AGG - chr5_2:55000617-55000636 Msa0776640:intron 35.0%
! TGGATCTGTTTATTTGGTTC+AGG - chr5_2:55001103-55001122 Msa0776640:intron 35.0%
!!! GGGGAATCTTTTTTTGTGAT+AGG - chr5_2:55001322-55001341 Msa0776640:intron 35.0%
ACAAAAATCAACCTTGTCCA+TGG + chr5_2:55001398-55001417 None:intergenic 35.0%
TTGATCTGCAGTGATTTAAC+TGG - chr5_2:55001510-55001529 Msa0776640:CDS 35.0%
AAAGAAAGGATGATCCATCA+TGG - chr5_2:55001592-55001611 Msa0776640:CDS 35.0%
AAGAAAGGATGATCCATCAT+GGG - chr5_2:55001593-55001612 Msa0776640:CDS 35.0%
!! TTTTGGGAAGATTATTTGCC+AGG - chr5_2:55001775-55001794 Msa0776640:CDS 35.0%
AACTATGGTACAGCAAAGTT+GGG + chr5_2:55001817-55001836 None:intergenic 35.0%
AAACTATGGTACAGCAAAGT+TGG + chr5_2:55001818-55001837 None:intergenic 35.0%
! GCTGTACCATAGTTTTTGTA+AGG - chr5_2:55001823-55001842 Msa0776640:CDS 35.0%
GAGAGACCTTACAAAAACTA+TGG + chr5_2:55001832-55001851 None:intergenic 35.0%
TCTACATTTCAGGAGGAAAA+GGG - chr5_2:55001866-55001885 Msa0776640:CDS 35.0%
AAAGGATCCACAATGTTCAT+CGG + chr5_2:55001932-55001951 None:intergenic 35.0%
!! CTATCCTTGATTTTGAAGGA+CGG + chr5_2:55001998-55002017 None:intergenic 35.0%
! TAGCCTATCCTTGATTTTGA+AGG + chr5_2:55002002-55002021 None:intergenic 35.0%
ATCAAGGATAGGCTATTGAA+AGG - chr5_2:55002007-55002026 Msa0776640:CDS 35.0%
! ATTGAAAGGTATATGGTCCT+TGG - chr5_2:55002021-55002040 Msa0776640:CDS 35.0%
ATAACAGTGGTCTAAGGAAA+AGG + chr5_2:55002068-55002087 None:intergenic 35.0%
CTTCAAATAACAGTGGTCTA+AGG + chr5_2:55002074-55002093 None:intergenic 35.0%
! CTTAGACCACTGTTATTTGA+AGG - chr5_2:55002072-55002091 Msa0776640:CDS 35.0%
!! TGTCTTGTTGGACTTTTAGT+TGG - chr5_2:55002429-55002448 Msa0776640:intron 35.0%
!! GTCTTGTTGGACTTTTAGTT+GGG - chr5_2:55002430-55002449 Msa0776640:intron 35.0%
!!! TTAGCCTAGTTTTTAGGGTT+TGG - chr5_2:55002458-55002477 Msa0776640:intron 35.0%
CAAACCAAACCCTAAAAACT+AGG + chr5_2:55002465-55002484 None:intergenic 35.0%
TGAGAATGTGAAATTCTGTC+TGG - chr5_2:55002669-55002688 Msa0776640:intron 35.0%
AAGAAGAAGAAAGGTGATGA+TGG - chr5_2:55003248-55003267 Msa0776640:CDS 35.0%
!!! CGGTTCGTGTTGTTTTATTT+TGG - chr5_2:55003352-55003371 Msa0776640:CDS 35.0%
ACAGCATGAGTTAATACAAC+AGG - chr5_2:55003386-55003405 Msa0776640:CDS 35.0%
CAGCATGAGTTAATACAACA+GGG - chr5_2:55003387-55003406 Msa0776640:CDS 35.0%
! TGAAGTGTTTCGGTTTCTGA+TGG + chr5_2:54998953-54998972 None:intergenic 40.0%
!! TCGAGCATTTCACTTGTTGT+TGG + chr5_2:54999025-54999044 None:intergenic 40.0%
CAACAAGTGAAATGCTCGAT+TGG - chr5_2:54999026-54999045 Msa0776640:three_prime_UTR 40.0%
ATTCTCAATAGCGCGAATAG+CGG + chr5_2:54999128-54999147 None:intergenic 40.0%
TGAGAATGATCCTTCGTTGA+CGG - chr5_2:54999141-54999160 Msa0776640:CDS 40.0%
AAACGTCAAGAGTTACATGG+TGG - chr5_2:54999181-54999200 Msa0776640:CDS 40.0%
! TGGTGGATCTTTGAAAGAGA+AGG - chr5_2:54999198-54999217 Msa0776640:CDS 40.0%
GAGGTTATTGTTAGGAGAAG+TGG - chr5_2:54999223-54999242 Msa0776640:CDS 40.0%
!!! GCCTGAAGTGTTTTGAGAAA+TGG - chr5_2:55000305-55000324 Msa0776640:intron 40.0%
GCCATTTCTCAAAACACTTC+AGG + chr5_2:55000309-55000328 None:intergenic 40.0%
! TGTTTTCTTTGCTCTCTCAG+TGG + chr5_2:55000530-55000549 None:intergenic 40.0%
ACTGAGAGAGCAAAGAAAAC+AGG - chr5_2:55000529-55000548 Msa0776640:CDS 40.0%
GAGAGCAAAGAAAACAGGAA+AGG - chr5_2:55000534-55000553 Msa0776640:CDS 40.0%
AATCTTCGTGACTATCCCAA+AGG - chr5_2:55000576-55000595 Msa0776640:intron 40.0%
TCGGTCCAAAATGATCCTTT+GGG + chr5_2:55000594-55000613 None:intergenic 40.0%
ATCGGTCCAAAATGATCCTT+TGG + chr5_2:55000595-55000614 None:intergenic 40.0%
TATGATCCTAATAGGAACCG+TGG - chr5_2:55000625-55000644 Msa0776640:intron 40.0%
ATGATCCTAATAGGAACCGT+GGG - chr5_2:55000626-55000645 Msa0776640:intron 40.0%
!! GGTTCTTGTTGGTGATACTT+GGG - chr5_2:55000648-55000667 Msa0776640:intron 40.0%
ATAGGATGGAATGTAGGCAA+TGG - chr5_2:55000674-55000693 Msa0776640:intron 40.0%
TAGGATGGAATGTAGGCAAT+GGG - chr5_2:55000675-55000694 Msa0776640:intron 40.0%
CAAACTTCTGGTCAAATGAC+TGG + chr5_2:55000867-55000886 None:intergenic 40.0%
GTCTCACTCAATGTACTTAC+TGG + chr5_2:55001265-55001284 None:intergenic 40.0%
GTACATTGAGTGAGACCTAA+TGG - chr5_2:55001269-55001288 Msa0776640:CDS 40.0%
TCTGCAGGTATTTGTTTGTG+AGG - chr5_2:55001354-55001373 Msa0776640:intron 40.0%
! TTTTCCTATCTGGGTGTTTG+TGG - chr5_2:55001432-55001451 Msa0776640:intron 40.0%
ACTCCTTAACAGTAGGTAGT+GGG + chr5_2:55001548-55001567 None:intergenic 40.0%
AACTCCTTAACAGTAGGTAG+TGG + chr5_2:55001549-55001568 None:intergenic 40.0%
ACCTACTGTTAAGGAGTTCA+AGG - chr5_2:55001551-55001570 Msa0776640:CDS 40.0%
CCTACTGTTAAGGAGTTCAA+GGG - chr5_2:55001552-55001571 Msa0776640:CDS 40.0%
CTTACATCAAAGTCCCATGA+TGG + chr5_2:55001609-55001628 None:intergenic 40.0%
CAGAAATGTAATACGCAGCA+CGG + chr5_2:55001690-55001709 None:intergenic 40.0%
ACTATGGTACAGCAAAGTTG+GGG + chr5_2:55001816-55001835 None:intergenic 40.0%
GTCTACATTTCAGGAGGAAA+AGG - chr5_2:55001865-55001884 Msa0776640:CDS 40.0%
!! TTCATCGGCTTCTTACTTTG+TGG + chr5_2:55001917-55001936 None:intergenic 40.0%
TAAGAAGCCGATGAACATTG+TGG - chr5_2:55001922-55001941 Msa0776640:CDS 40.0%
!! AAGGACGGCTTTATAGCTTT+TGG + chr5_2:55001983-55002002 None:intergenic 40.0%
AAAGCCGTCCTTCAAAATCA+AGG - chr5_2:55001991-55002010 Msa0776640:CDS 40.0%
CGTCCTTCAAAATCAAGGAT+AGG - chr5_2:55001996-55002015 Msa0776640:CDS 40.0%
!! GATATAGCTTTGGCCAGAAA+AGG + chr5_2:55002261-55002280 None:intergenic 40.0%
! TTTCTGGCCAAAGCTATATC+AGG - chr5_2:55002261-55002280 Msa0776640:CDS 40.0%
CCAAAGCTATATCAGGAACA+GGG - chr5_2:55002268-55002287 Msa0776640:CDS 40.0%
TGAGTATCTTCAGAATCCAC+AGG - chr5_2:55002364-55002383 Msa0776640:intron 40.0%
ACAGGTTAACAGGGAAATGA+TGG - chr5_2:55003037-55003056 Msa0776640:intron 40.0%
CAGGTTAACAGGGAAATGAT+GGG - chr5_2:55003038-55003057 Msa0776640:intron 40.0%
TGAACAACAGGAAGAACAGA+TGG - chr5_2:55003088-55003107 Msa0776640:intron 40.0%
GAGTGAAGAAAATGACAAGC+CGG - chr5_2:55003139-55003158 Msa0776640:CDS 40.0%
!!! ATCAGAGGATTTTGAGACCT+CGG + chr5_2:55003174-55003193 None:intergenic 40.0%
!!! GACTTTTTCACTCGAATCAG+AGG + chr5_2:55003189-55003208 None:intergenic 40.0%
TGATTCGAGTGAAAAAGTCG+TGG - chr5_2:55003190-55003209 Msa0776640:CDS 40.0%
TCACCTTTCTTCTTCTTCTG+TGG + chr5_2:55003245-55003264 None:intergenic 40.0%
TGTGGAGGAACAAATTGATG+AGG - chr5_2:55003286-55003305 Msa0776640:CDS 40.0%
! AAACAGTGGCTTGCAATTAG+AGG - chr5_2:55003324-55003343 Msa0776640:CDS 40.0%
!! CACTTGTTGTTGGAACGACA+GGG + chr5_2:54999015-54999034 None:intergenic 45.0%
!! TCACTTGTTGTTGGAACGAC+AGG + chr5_2:54999016-54999035 None:intergenic 45.0%
TCACTTGGTTGAGCACAATC+AGG + chr5_2:54999058-54999077 None:intergenic 45.0%
CTCAGGCAACTGCATACAAA+AGG + chr5_2:54999284-54999303 None:intergenic 45.0%
CTTACAGTAACAGGTCTCTC+AGG + chr5_2:54999301-54999320 None:intergenic 45.0%
!! TTGTTGGTTCAGACTCCATG+TGG - chr5_2:55000271-55000290 Msa0776640:intron 45.0%
!! TGTTGGTTCAGACTCCATGT+GGG - chr5_2:55000272-55000291 Msa0776640:intron 45.0%
! TTTGAGAAATGGCTTGGGCA+AGG - chr5_2:55000316-55000335 Msa0776640:intron 45.0%
! AACGAACTTGCTCAAACTGC+AGG - chr5_2:55000341-55000360 Msa0776640:intron 45.0%
!! CTTGGATTAGTCGCCATCTT+CGG + chr5_2:55000379-55000398 None:intergenic 45.0%
TCCAAGAATCAACGCACAGT+TGG - chr5_2:55000393-55000412 Msa0776640:intron 45.0%
GAAAGGCTAATGCTTGCAGT+GGG - chr5_2:55000551-55000570 Msa0776640:intron 45.0%
GGATCATACTCAGCAAGGAT+CGG + chr5_2:55000613-55000632 None:intergenic 45.0%
TGATCCTAATAGGAACCGTG+GGG - chr5_2:55000627-55000646 Msa0776640:intron 45.0%
TATCACCAACAAGAACCCCA+CGG + chr5_2:55000645-55000664 None:intergenic 45.0%
!! GGGTTCTTGTTGGTGATACT+TGG - chr5_2:55000647-55000666 Msa0776640:intron 45.0%
!! TCTTGTTGGTGATACTTGGG+AGG - chr5_2:55000651-55000670 Msa0776640:intron 45.0%
! TTGGTGATACTTGGGAGGAT+AGG - chr5_2:55000656-55000675 Msa0776640:intron 45.0%
TGATACTTGGGAGGATAGGA+TGG - chr5_2:55000660-55000679 Msa0776640:intron 45.0%
AGGATGGAATGTAGGCAATG+GGG - chr5_2:55000676-55000695 Msa0776640:intron 45.0%
! ATTGCTGGTCAGAGTACCTA+CGG - chr5_2:55000724-55000743 Msa0776640:intron 45.0%
TATGTAGACGACGAGGATCA+TGG - chr5_2:55000775-55000794 Msa0776640:intron 45.0%
ATGTAGACGACGAGGATCAT+GGG - chr5_2:55000776-55000795 Msa0776640:intron 45.0%
! CACGAACAGGATAGCCTTTT+CGG + chr5_2:55000921-55000940 None:intergenic 45.0%
! GCTATCCTGTTCGTGTTGTT+AGG - chr5_2:55000926-55000945 Msa0776640:intron 45.0%
ACGAACCTAACAACACGAAC+AGG + chr5_2:55000934-55000953 None:intergenic 45.0%
! TATTTGGTTCAGGTCCCACA+AGG - chr5_2:55001113-55001132 Msa0776640:intron 45.0%
AGAGGAACGTTTCTCCTTGT+GGG + chr5_2:55001130-55001149 None:intergenic 45.0%
AAGAGGAACGTTTCTCCTTG+TGG + chr5_2:55001131-55001150 None:intergenic 45.0%
GAAACGTTCCTCTTATGCAC+CGG - chr5_2:55001137-55001156 Msa0776640:intron 45.0%
AAGCAGGAGTGAGATACGAT+GGG - chr5_2:55001160-55001179 Msa0776640:intron 45.0%
GAGAAATGTTGGCGCAAAGT+TGG - chr5_2:55001195-55001214 Msa0776640:intron 45.0%
CCCTTGAACTCCTTAACAGT+AGG + chr5_2:55001555-55001574 None:intergenic 45.0%
AATGTAATACGCAGCACGGA+AGG + chr5_2:55001686-55001705 None:intergenic 45.0%
TCGGCTTCTTACTTTGTGGT+GGG + chr5_2:55001913-55001932 None:intergenic 45.0%
! ATCGGCTTCTTACTTTGTGG+TGG + chr5_2:55001914-55001933 None:intergenic 45.0%
TGGTTGCAATATCTGTCGCA+AGG - chr5_2:55002172-55002191 Msa0776640:intron 45.0%
CAATATCTGTCGCAAGGTGT+TGG - chr5_2:55002178-55002197 Msa0776640:intron 45.0%
AGCACAAGGTGTAGTAAGAG+GGG + chr5_2:55002207-55002226 None:intergenic 45.0%
GAGCACAAGGTGTAGTAAGA+GGG + chr5_2:55002208-55002227 None:intergenic 45.0%
TGAGCACAAGGTGTAGTAAG+AGG + chr5_2:55002209-55002228 None:intergenic 45.0%
TTGCAGAAGTTGTGAGCACA+AGG + chr5_2:55002221-55002240 None:intergenic 45.0%
TGTGCTCACAACTTCTGCAA+AGG - chr5_2:55002221-55002240 Msa0776640:intron 45.0%
GCCAAAGCTATATCAGGAAC+AGG - chr5_2:55002267-55002286 Msa0776640:CDS 45.0%
CCCTGTTCCTGATATAGCTT+TGG + chr5_2:55002271-55002290 None:intergenic 45.0%
AATACGTGCAGTAGTACCTG+TGG + chr5_2:55002383-55002402 None:intergenic 45.0%
ACAACAGGAAGAACAGATGG+AGG - chr5_2:55003091-55003110 Msa0776640:intron 45.0%
GAACAGATGGAGGAGAATTC+TGG - chr5_2:55003101-55003120 Msa0776640:intron 45.0%
TTCGAGTGAAAAAGTCGTGG+AGG - chr5_2:55003193-55003212 Msa0776640:CDS 45.0%
AGTCGTGGAGGAAATTAACG+AGG - chr5_2:55003205-55003224 Msa0776640:CDS 45.0%
CCTTTCTTCTTCTTCTGTGG+AGG + chr5_2:55003242-55003261 None:intergenic 45.0%
CCTCCACAGAAGAAGAAGAA+AGG - chr5_2:55003239-55003258 Msa0776640:CDS 45.0%
!! GAAGAAAGGTGATGATGGCA+AGG - chr5_2:55003253-55003272 Msa0776640:CDS 45.0%
GAGGAACAAATTGATGAGGC+TGG - chr5_2:55003290-55003309 Msa0776640:CDS 45.0%
ACAAATTGATGAGGCTGGAG+TGG - chr5_2:55003295-55003314 Msa0776640:CDS 45.0%
TGGAGTGGAAAGCAAAACAG+TGG - chr5_2:55003310-55003329 Msa0776640:CDS 45.0%
GCTTGCAATTAGAGGTGGAT+CGG - chr5_2:55003332-55003351 Msa0776640:CDS 45.0%
!! TAAATTTAAAAAAACAAAAA+GGG + chr5_2:54999346-54999365 None:intergenic 5.0%
!!! AATTATTAAGTTTAAATTTT+GGG - chr5_2:55001759-55001778 Msa0776640:CDS 5.0%
GCAGCAGCAACAACATCACT+TGG + chr5_2:54999073-54999092 None:intergenic 50.0%
GAATGATCCTTCGTTGACGG+AGG - chr5_2:54999144-54999163 Msa0776640:CDS 50.0%
TTCTCTTCCTCCGTCAACGA+AGG + chr5_2:54999154-54999173 None:intergenic 50.0%
AGGCAGAAATTGTGCCCACA+TGG + chr5_2:55000289-55000308 None:intergenic 50.0%
GACTGCAATTCCACCGAAGA+TGG - chr5_2:55000363-55000382 Msa0776640:intron 50.0%
!! GCCAACTGTGCGTTGATTCT+TGG + chr5_2:55000397-55000416 None:intergenic 50.0%
CAGTGGTGTAGCATGTGTCA+GGG + chr5_2:55000513-55000532 None:intergenic 50.0%
TCAGTGGTGTAGCATGTGTC+AGG + chr5_2:55000514-55000533 None:intergenic 50.0%
GGAAAGGCTAATGCTTGCAG+TGG - chr5_2:55000550-55000569 Msa0776640:intron 50.0%
AGAACCCCACGGTTCCTATT+AGG + chr5_2:55000634-55000653 None:intergenic 50.0%
GGGAGGATAGGATGGAATGT+AGG - chr5_2:55000668-55000687 Msa0776640:intron 50.0%
! GCTCATTTTCCCCATGTTGC+TGG - chr5_2:55000700-55000719 Msa0776640:intron 50.0%
ACCAGCAATGCCAGCAACAT+GGG + chr5_2:55000713-55000732 None:intergenic 50.0%
! TTGCTGGTCAGAGTACCTAC+GGG - chr5_2:55000725-55000744 Msa0776640:intron 50.0%
TGTAGACGACGAGGATCATG+GGG - chr5_2:55000777-55000796 Msa0776640:intron 50.0%
TGGTTCCTTTACACCGGAAG+CGG - chr5_2:55000802-55000821 Msa0776640:intron 50.0%
TTGCGAACCAGTTGCCGAAA+AGG - chr5_2:55000904-55000923 Msa0776640:intron 50.0%
! AGGATAGCCTTTTCGGCAAC+TGG + chr5_2:55000914-55000933 None:intergenic 50.0%
TCGTATCTCACTCCTGCTTC+CGG + chr5_2:55001159-55001178 None:intergenic 50.0%
GAAGCAGGAGTGAGATACGA+TGG - chr5_2:55001159-55001178 Msa0776640:intron 50.0%
AGCAGGAGTGAGATACGATG+GGG - chr5_2:55001161-55001180 Msa0776640:intron 50.0%
GATAGGGTCATAAGGTCTGC+AGG - chr5_2:55001339-55001358 Msa0776640:intron 50.0%
ATCAACCTTGTCCATGGAGC+TGG + chr5_2:55001392-55001411 None:intergenic 50.0%
GCAACCACAAACACCCAGAT+AGG + chr5_2:55001439-55001458 None:intergenic 50.0%
!! TTAACAGTAGGTAGTGGGCG+AGG + chr5_2:55001543-55001562 None:intergenic 50.0%
TCGCCCACTACCTACTGTTA+AGG - chr5_2:55001542-55001561 Msa0776640:CDS 50.0%
GGGAAAAAACGTTCATCGCC+TGG + chr5_2:55001796-55001815 None:intergenic 50.0%
TTCAGGAGGAAAAGGGCTGT+TGG - chr5_2:55001873-55001892 Msa0776640:CDS 50.0%
GGCTTCTTACTTTGTGGTGG+GGG + chr5_2:55001911-55001930 None:intergenic 50.0%
CGGCTTCTTACTTTGTGGTG+GGG + chr5_2:55001912-55001931 None:intergenic 50.0%
CAACTTCTGCAAAGGCTGCT+TGG - chr5_2:55002229-55002248 Msa0776640:intron 50.0%
TTCTGCAAAGGCTGCTTGGA+GGG - chr5_2:55002233-55002252 Msa0776640:intron 50.0%
CTCAAAGTGGACGCAGTTTG+CGG - chr5_2:55002294-55002313 Msa0776640:CDS 50.0%
GCTATGTCAGTTGCACAGGT+AGG + chr5_2:55002344-55002363 None:intergenic 50.0%
CTCAGCTATGTCAGTTGCAC+AGG + chr5_2:55002348-55002367 None:intergenic 50.0%
GATAGAATCACTCCAGCGAC+AGG - chr5_2:55003064-55003083 Msa0776640:intron 50.0%
! CAGTGGCTTGCAATTAGAGG+TGG - chr5_2:55003327-55003346 Msa0776640:CDS 50.0%
CACCTTCCTTGTGACGCTGA+CGG - chr5_2:54998902-54998921 Msa0776640:three_prime_UTR 55.0%
CATACACCGTCAGCGTCACA+AGG + chr5_2:54998911-54998930 None:intergenic 55.0%
TGACGCTGACGGTGTATGCA+TGG - chr5_2:54998913-54998932 Msa0776640:three_prime_UTR 55.0%
GCAAAACCTGCACAGCACCA+TGG - chr5_2:54998975-54998994 Msa0776640:three_prime_UTR 55.0%
!! AACATGCCATGGTGCTGTGC+AGG + chr5_2:54998984-54999003 None:intergenic 55.0%
GGGAGACATGGAACATGCCA+TGG + chr5_2:54998995-54999014 None:intergenic 55.0%
GTTGGAACGACAGGGAGACA+TGG + chr5_2:54999007-54999026 None:intergenic 55.0%
ACAAGATCCCCCGCAACAGA+CGG + chr5_2:54999103-54999122 None:intergenic 55.0%
!! GGATTAGTCGCCATCTTCGG+TGG + chr5_2:55000376-55000395 None:intergenic 55.0%
GTTGGCGATTGCGATCCGTA+TGG - chr5_2:55000411-55000430 Msa0776640:CDS 55.0%
TCCGTATGGCCAAGCTAGCT+AGG - chr5_2:55000425-55000444 Msa0776640:CDS 55.0%
! CCCTAGCTAGCTTGGCCATA+CGG + chr5_2:55000429-55000448 None:intergenic 55.0%
CCGTATGGCCAAGCTAGCTA+GGG - chr5_2:55000426-55000445 Msa0776640:CDS 55.0%
AGGAACCGTGGGGTTCTTGT+TGG - chr5_2:55000637-55000656 Msa0776640:intron 55.0%
CCAGCAATGCCAGCAACATG+GGG + chr5_2:55000712-55000731 None:intergenic 55.0%
GACCAGCAATGCCAGCAACA+TGG + chr5_2:55000714-55000733 None:intergenic 55.0%
! TGCTGGTCAGAGTACCTACG+GGG - chr5_2:55000726-55000745 Msa0776640:intron 55.0%
GGCTCAATCTGTCGCTCTCT+CGG - chr5_2:55000747-55000766 Msa0776640:intron 55.0%
GCTCAATCTGTCGCTCTCTC+GGG - chr5_2:55000748-55000767 Msa0776640:intron 55.0%
GGGTGGTTATGTAGACGACG+AGG - chr5_2:55000768-55000787 Msa0776640:intron 55.0%
GGGGAGTGGTTCCTTTACAC+CGG - chr5_2:55000796-55000815 Msa0776640:intron 55.0%
TTCCTTTACACCGGAAGCGG+TGG - chr5_2:55000805-55000824 Msa0776640:intron 55.0%
TTCCACCGCTTCCGGTGTAA+AGG + chr5_2:55000810-55000829 None:intergenic 55.0%
TTTACACCGGAAGCGGTGGA+AGG - chr5_2:55000809-55000828 Msa0776640:CDS 55.0%
TTACACCGGAAGCGGTGGAA+GGG - chr5_2:55000810-55000829 Msa0776640:CDS 55.0%
TCCTCTTATGCACCGGAAGC+AGG - chr5_2:55001144-55001163 Msa0776640:intron 55.0%
TCCTGCTTCCGGTGCATAAG+AGG + chr5_2:55001148-55001167 None:intergenic 55.0%
GTGACAATGAGCCAGCTCCA+TGG - chr5_2:55001378-55001397 Msa0776640:intron 55.0%
ATGAGCCAGCTCCATGGACA+AGG - chr5_2:55001384-55001403 Msa0776640:intron 55.0%
! AGGAAAAGGGCTGTTGGCTG+TGG - chr5_2:55001879-55001898 Msa0776640:CDS 55.0%
CTTCTGCAAAGGCTGCTTGG+AGG - chr5_2:55002232-55002251 Msa0776640:intron 55.0%
!!! TGCTTGGAGGGTGCCTTTTC+TGG - chr5_2:55002245-55002264 Msa0776640:intron 55.0%
AGGAACAGGGCGACTCAAAG+TGG - chr5_2:55002281-55002300 Msa0776640:CDS 55.0%
GAGACCTCGGTCTCTTCATC+CGG + chr5_2:55003161-55003180 None:intergenic 55.0%
!! AGGTGATGATGGCAAGGCTG+TGG - chr5_2:55003259-55003278 Msa0776640:CDS 55.0%
TGGCAAGGCTGTGGTGAATG+TGG - chr5_2:55003268-55003287 Msa0776640:CDS 55.0%
CAAGGCTGTGGTGAATGTGG+AGG - chr5_2:55003271-55003290 Msa0776640:CDS 55.0%
CGTCAGCGTCACAAGGAAGG+TGG + chr5_2:54998904-54998923 None:intergenic 60.0%
CACCGTCAGCGTCACAAGGA+AGG + chr5_2:54998907-54998926 None:intergenic 60.0%
TGCTGCTGCTCCGTCTGTTG+CGG - chr5_2:54999090-54999109 Msa0776640:CDS 60.0%
GCCAAGCTAGCTAGGGCAGA+GGG - chr5_2:55000433-55000452 Msa0776640:CDS 60.0%
ACCCTCTGCCCTAGCTAGCT+TGG + chr5_2:55000437-55000456 None:intergenic 60.0%
! CTAGCTAGGGCAGAGGGTGT+TGG - chr5_2:55000439-55000458 Msa0776640:CDS 60.0%
CCCCATGTTGCTGGCATTGC+TGG - chr5_2:55000709-55000728 Msa0776640:intron 60.0%
AGCGACAGATTGAGCCCCGT+AGG + chr5_2:55000743-55000762 None:intergenic 60.0%
CAATCTGTCGCTCTCTCGGG+TGG - chr5_2:55000751-55000770 Msa0776640:intron 60.0%
ACGACGAGGATCATGGGGAG+TGG - chr5_2:55000782-55000801 Msa0776640:intron 60.0%
GAGATCCCTTCCACCGCTTC+CGG + chr5_2:55000818-55000837 None:intergenic 60.0%
AGCGGTGGAAGGGATCTCAG+TGG - chr5_2:55000820-55000839 Msa0776640:CDS 60.0%
GCGGTGGAAGGGATCTCAGT+GGG - chr5_2:55000821-55000840 Msa0776640:CDS 60.0%
!! CAGTAGGTAGTGGGCGAGGA+CGG + chr5_2:55001539-55001558 None:intergenic 60.0%
CCTGTTGTTCAGCCTGTCGC+TGG + chr5_2:55003079-55003098 None:intergenic 60.0%
CCAGCGACAGGCTGAACAAC+AGG - chr5_2:55003076-55003095 Msa0776640:intron 60.0%
CAAGCCGGATGAAGAGACCG+AGG - chr5_2:55003154-55003173 Msa0776640:CDS 60.0%
GCTGCTGCTCCGTCTGTTGC+GGG - chr5_2:54999091-54999110 Msa0776640:CDS 65.0%
CTGCTGCTCCGTCTGTTGCG+GGG - chr5_2:54999092-54999111 Msa0776640:CDS 65.0%
TGCTGCTCCGTCTGTTGCGG+GGG - chr5_2:54999093-54999112 Msa0776640:CDS 65.0%
GGCCAAGCTAGCTAGGGCAG+AGG - chr5_2:55000432-55000451 Msa0776640:CDS 65.0%
!! GCTAGGGCAGAGGGTGTTGG+TGG - chr5_2:55000442-55000461 Msa0776640:CDS 65.0%
Chromosome Type Strat End Strand Name
chr5_2 gene 54998812 55003620 54998812 ID=Msa0776640;Name=Msa0776640
chr5_2 mRNA 54998812 55003620 54998812 ID=Msa0776640-mRNA-1;Parent=Msa0776640;Name=Msa0776640-mRNA-1;_AED=0.06;_eAED=0.06;_QI=72|0.75|0.88|0.88|1|1|9|277|708
chr5_2 exon 54998812 54999391 54998812 ID=Msa0776640-mRNA-1:exon:16315;Parent=Msa0776640-mRNA-1
chr5_2 exon 55000047 55000264 55000047 ID=Msa0776640-mRNA-1:exon:16314;Parent=Msa0776640-mRNA-1
chr5_2 exon 55000404 55000554 55000404 ID=Msa0776640-mRNA-1:exon:16313;Parent=Msa0776640-mRNA-1
chr5_2 exon 55000809 55000911 55000809 ID=Msa0776640-mRNA-1:exon:16312;Parent=Msa0776640-mRNA-1
chr5_2 exon 55001027 55001088 55001027 ID=Msa0776640-mRNA-1:exon:16311;Parent=Msa0776640-mRNA-1
chr5_2 exon 55001208 55001307 55001208 ID=Msa0776640-mRNA-1:exon:16310;Parent=Msa0776640-mRNA-1
chr5_2 exon 55001485 55002149 55001485 ID=Msa0776640-mRNA-1:exon:16309;Parent=Msa0776640-mRNA-1
chr5_2 exon 55002250 55002342 55002250 ID=Msa0776640-mRNA-1:exon:16308;Parent=Msa0776640-mRNA-1
chr5_2 exon 55003117 55003620 55003117 ID=Msa0776640-mRNA-1:exon:16307;Parent=Msa0776640-mRNA-1
chr5_2 five_prime_UTR 55003549 55003620 55003549 ID=Msa0776640-mRNA-1:five_prime_utr;Parent=Msa0776640-mRNA-1
chr5_2 CDS 55003117 55003548 55003117 ID=Msa0776640-mRNA-1:cds;Parent=Msa0776640-mRNA-1
chr5_2 CDS 55002250 55002342 55002250 ID=Msa0776640-mRNA-1:cds;Parent=Msa0776640-mRNA-1
chr5_2 CDS 55001485 55002149 55001485 ID=Msa0776640-mRNA-1:cds;Parent=Msa0776640-mRNA-1
chr5_2 CDS 55001208 55001307 55001208 ID=Msa0776640-mRNA-1:cds;Parent=Msa0776640-mRNA-1
chr5_2 CDS 55001027 55001088 55001027 ID=Msa0776640-mRNA-1:cds;Parent=Msa0776640-mRNA-1
chr5_2 CDS 55000809 55000911 55000809 ID=Msa0776640-mRNA-1:cds;Parent=Msa0776640-mRNA-1
chr5_2 CDS 55000404 55000554 55000404 ID=Msa0776640-mRNA-1:cds;Parent=Msa0776640-mRNA-1
chr5_2 CDS 55000047 55000264 55000047 ID=Msa0776640-mRNA-1:cds;Parent=Msa0776640-mRNA-1
chr5_2 CDS 54999089 54999391 54999089 ID=Msa0776640-mRNA-1:cds;Parent=Msa0776640-mRNA-1
chr5_2 three_prime_UTR 54998812 54999088 54998812 ID=Msa0776640-mRNA-1:three_prime_utr;Parent=Msa0776640-mRNA-1
Gene Sequence

>Msa0776640

ATGGCGAACATCACTCACCACCTTCCTTGTGACGCTGACGGTGTATGCATGGTGTGCAAACAAAAACCATCAGAAACCGAAACACTTCATTGCAAAACCTGCACAGCACCATGGCATGTTCCATGTCTCCCTGTCGTTCCAACAACAAGTGAAATGCTCGATTGGTTGTGTCCTGATTGTGCTCAACCAAGTGATGTTGTTGCTGCTGCTGCTGCTCCGTCTGTTGCGGGGGATCTTGTCTCCGCTATTCGCGCTATTGAGAATGATCCTTCGTTGACGGAGGAAGAGAAGAGAAAGAAACGTCAAGAGTTACATGGTGGATCTTTGAAAGAGAAGGATGAGGTTATTGTTAGGAGAAGTGGTGTTCTTGATATCTTTGATGGAAGTCTTAACTGTTCCTTTTGTATGCAGTTGCCTGAGAGACCTGTTACTGATGTTAGATATTTGGTTTTATTATACTTATTATTTGAAATTGAATTTGATTTTGTTGTTGCTGATGACGTTGTTGTCTTGTATCCTGAACAAACTCCATGTGGGCACAATTTCTGCCTGAAGTGTTTTGAGAAATGGCTTGGGCAAGGAAAACGAACTTGCTCAAACTGCAGGACTGCAATTCCACCGAAGATGGCGACTAATCCAAGAATCAACGCACAGTTGGCGATTGCGATCCGTATGGCCAAGCTAGCTAGGGCAGAGGGTGTTGGTGGAAGCACTGCTCCAAAAAATTATCAAGTTGTTCTCAATGATGAGCGCCCTGACACATGCTACACCACTGAGAGAGCAAAGAAAACAGGAAAGGCTAATGCTTGCAGTGGGAAAATCTTCGTGACTATCCCAAAGGATCATTTTGGACCGATCCTTGCTGAGTATGATCCTAATAGGAACCGTGGGGTTCTTGTTGGTGATACTTGGGAGGATAGGATGGAATGTAGGCAATGGGGAGCTCATTTTCCCCATGTTGCTGGCATTGCTGGTCAGAGTACCTACGGGGCTCAATCTGTCGCTCTCTCGGGTGGTTATGTAGACGACGAGGATCATGGGGAGTGGTTCCTTTACACCGGAAGCGGTGGAAGGGATCTCAGTGGGAATAAACGTACGAACAAAAACCAGTCATTTGACCAGAAGTTTGAAAATATGAATGAGGCTTTGCGAACCAGTTGCCGAAAAGGCTATCCTGTTCGTGTTGTTAGGTCCCACAAGGAGAAACGTTCCTCTTATGCACCGGAAGCAGGAGTGAGATACGATGGGGTATACAGAATTGAGAAATGTTGGCGCAAAGTTGGAATACAAGGTCATAAGGTCTGCAGGTATTTGTTTGTGAGGTGTGACAATGAGCCAGCTCCATGGACAAGTGATTTAACTGGAGACCGTCCTCGCCCACTACCTACTGTTAAGGAGTTCAAGGGTGCCGTTGATATTACTGAAAGAAAGGATGATCCATCATGGGACTTTGATGAGGAAAAGGGCTGTTGGCTGTGGAAGAAGCCCCCACCACAAAGTAAGAAGCCGATGAACATTGTGGATCCTTTTGATCCAACAAAAATTCAAATTGTCAGGCCAAAAGCTATAAAGCCGTCCTTCAAAATCAAGGATAGGCTATTGAAAGAGTTTGGTTGCAATATCTGTCGCAAGGTGTTGGCTTCCCCTCTTACTACACCTTGTGCTCACAACTTCTGCAAAGGCTGCTTGGAGGGTGCCTTTTCTGGCCAAAGCTATATCAGGAACAGGGCGACTCAAAGTGGACGCAGTTTGCGGACGCAGAAGAACATTATGAAATGTCCTACCTGTGCAACTGACATAGCTGAGTATCTTCAGAATCCACAGGTTAACAGGGAAATGATGGGTGTGATAGAATCACTCCAGCGACAGGCTGAACAACAGGAAGAACAGATGGAGGAGAATTCTGGAGAATCAAGTGCTAAGAGTGAAGAAAATGACAAGCCGGATGAAGAGACCGAGGTCTCAAAATCCTCTGATTCGAGTGAAAAAGTCGTGGAGGAAATTAACGAGGATGATGTGAATCCTCCACAGAAGAAGAAGAAAGGTGATGATGGCAAGGCTGTGGTGAATGTGGAGGAACAAATTGATGAGGCTGGAGTGGAAAGCAAAACAGTGGCTTGCAATTAG
Protein sequence

>Msa0776640

MANITHHLPCDADGVCMVCKQKPSETETLHCKTCTAPWHVPCLPVVPTTSEMLDWLCPDCAQPSDVVAAAAAPSVAGDLVSAIRAIENDPSLTEEEKRKKRQELHGGSLKEKDEVIVRRSGVLDIFDGSLNCSFCMQLPERPVTDVRYLVLLYLLFEIEFDFVVADDVVVLYPEQTPCGHNFCLKCFEKWLGQGKRTCSNCRTAIPPKMATNPRINAQLAIAIRMAKLARAEGVGGSTAPKNYQVVLNDERPDTCYTTERAKKTGKANACSGKIFVTIPKDHFGPILAEYDPNRNRGVLVGDTWEDRMECRQWGAHFPHVAGIAGQSTYGAQSVALSGGYVDDEDHGEWFLYTGSGGRDLSGNKRTNKNQSFDQKFENMNEALRTSCRKGYPVRVVRSHKEKRSSYAPEAGVRYDGVYRIEKCWRKVGIQGHKVCRYLFVRCDNEPAPWTSDLTGDRPRPLPTVKEFKGAVDITERKDDPSWDFDEEKGCWLWKKPPPQSKKPMNIVDPFDPTKIQIVRPKAIKPSFKIKDRLLKEFGCNICRKVLASPLTTPCAHNFCKGCLEGAFSGQSYIRNRATQSGRSLRTQKNIMKCPTCATDIAEYLQNPQVNREMMGVIESLQRQAEQQEEQMEENSGESSAKSEENDKPDEETEVSKSSDSSEKVVEEINEDDVNPPQKKKKGDDGKAVVNVEEQIDEAGVESKTVACN*