AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0735620

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0735620 MtrunA17_Chr5g0432831 100.000 148 0 0 1 148 1 148 5.28e-110 308
Msa0735620 MtrunA17_Chr3g0108261 98.649 148 2 0 1 148 1 148 1.15e-108 305
Msa0735620 MtrunA17_Chr7g0275361 96.622 148 5 0 1 148 1 148 9.63e-107 300
Msa0735620 MtrunA17_Chr1g0154011 91.892 148 12 0 1 148 1 148 4.66e-103 291
Msa0735620 MtrunA17_Chr8g0369311 92.568 148 11 0 1 148 57 204 2.20e-102 291
Msa0735620 MtrunA17_Chr4g0037011 91.216 148 13 0 1 148 1 148 2.21e-102 289
Msa0735620 MtrunA17_Chr8g0378601 51.724 145 70 0 2 146 23 167 1.31e-55 172
Msa0735620 MtrunA17_Chr2g0316201 49.655 145 73 0 4 148 8 152 2.64e-48 152
Msa0735620 MtrunA17_Chr2g0316211 49.306 144 73 0 5 148 9 152 2.83e-47 150
Msa0735620 MtrunA17_Chr4g0060351 45.890 146 74 1 2 142 5 150 2.60e-45 145
Msa0735620 MtrunA17_Chr8g0362321 45.205 146 75 1 2 142 5 150 4.03e-45 144
Msa0735620 MtrunA17_Chr3g0131871 48.611 144 72 2 5 146 6 149 3.06e-42 139
Msa0735620 MtrunA17_Chr3g0139901 40.136 147 84 3 5 147 7 153 2.93e-34 117
Msa0735620 MtrunA17_Chr4g0038891 44.355 124 69 0 4 127 35 158 6.72e-34 117
Msa0735620 MtrunA17_Chr1g0199951 45.669 127 68 1 3 128 43 169 5.05e-33 115
Msa0735620 MtrunA17_Chr5g0396451 41.406 128 75 0 4 131 35 162 3.83e-32 112
Msa0735620 MtrunA17_Chr4g0053191 36.184 152 90 2 1 145 4 155 8.45e-30 105
Msa0735620 MtrunA17_Chr4g0031181 35.821 134 72 2 15 134 18 151 2.83e-27 99.8
Msa0735620 MtrunA17_Chr5g0401831 33.553 152 94 2 1 145 4 155 3.59e-27 99.4
Msa0735620 MtrunA17_Chr8g0348701 37.398 123 75 2 26 146 25 147 6.75e-27 99.4
Msa0735620 MtrunA17_Chr5g0403591 36.765 136 83 2 5 139 33 166 2.01e-26 98.2
Msa0735620 MtrunA17_Chr8g0387131 35.766 137 86 2 12 146 11 147 9.45e-26 96.3
Msa0735620 MtrunA17_Chr7g0254701 34.965 143 93 0 4 146 13 155 2.55e-25 97.4
Msa0735620 MtrunA17_Chr2g0328001 34.028 144 81 2 15 144 18 161 8.90e-25 93.6
Msa0735620 MtrunA17_Chr4g0059291 30.894 123 83 2 26 146 25 147 2.43e-22 87.8
Msa0735620 MtrunA17_Chr8g0372391 37.864 103 62 2 1 102 15 116 1.57e-18 77.0
Msa0735620 MtrunA17_Chr4g0068301 34.454 119 68 4 2 114 11 125 2.07e-18 79.7
Msa0735620 MtrunA17_Chr8g0376111 31.373 153 87 5 4 144 43 189 4.02e-18 79.0
Msa0735620 MtrunA17_Chr5g0404931 36.893 103 63 2 1 102 15 116 5.96e-18 75.5
Msa0735620 MtrunA17_Chr7g0233631 36.885 122 67 3 4 115 38 159 3.05e-17 76.6
Msa0735620 MtrunA17_Chr7g0233611 36.885 122 67 3 4 115 38 159 7.11e-17 75.5
Msa0735620 MtrunA17_Chr8g0345331 32.479 117 70 3 4 115 8 120 5.55e-16 72.0
Msa0735620 MtrunA17_Chr4g0047301 31.333 150 90 4 4 143 672 818 3.33e-15 71.6
Msa0735620 MtrunA17_Chr7g0222941 30.894 123 75 3 3 115 90 212 8.02e-15 68.9
Msa0735620 MtrunA17_Chr2g0282211 28.947 152 95 4 3 144 681 829 2.90e-14 68.9
Msa0735620 MtrunA17_Chr4g0045101 32.787 122 72 3 4 115 37 158 3.84e-14 67.8
Msa0735620 MtrunA17_Chr1g0186291 30.303 99 55 2 43 140 30 115 2.04e-13 63.2
Msa0735620 MtrunA17_Chr2g0317631 30.081 123 76 3 3 115 306 428 1.35e-12 63.9
Msa0735620 MtrunA17_Chr8g0376201 30.496 141 87 4 3 133 192 331 2.24e-12 63.2
Msa0735620 MtrunA17_Chr1g0198021 28.455 123 78 3 3 115 137 259 3.41e-12 62.8
Msa0735620 MtrunA17_Chr1g0211131 29.508 122 76 3 4 115 823 944 5.26e-12 62.4
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0735620 AT5G41700.5 97.297 148 4 0 1 148 1 148 5.33e-108 304
Msa0735620 AT5G41700.2 97.297 148 4 0 1 148 1 148 5.33e-108 304
Msa0735620 AT5G41700.1 97.297 148 4 0 1 148 1 148 5.33e-108 304
Msa0735620 AT1G64230.2 96.622 148 5 0 1 148 1 148 6.02e-108 303
Msa0735620 AT1G64230.1 96.622 148 5 0 1 148 1 148 6.02e-108 303
Msa0735620 AT4G27960.1 95.270 148 7 0 1 148 1 148 2.68e-106 299
Msa0735620 AT5G53300.2 95.270 148 7 0 1 148 1 148 5.98e-106 298
Msa0735620 AT5G53300.4 95.270 148 7 0 1 148 1 148 5.98e-106 298
Msa0735620 AT5G53300.1 95.270 148 7 0 1 148 1 148 5.98e-106 298
Msa0735620 AT4G27960.2 95.270 148 7 0 1 148 31 178 8.91e-106 299
Msa0735620 AT5G41700.4 95.973 149 5 1 1 148 1 149 3.47e-105 296
Msa0735620 AT3G08690.2 93.243 148 10 0 1 148 1 148 2.82e-104 294
Msa0735620 AT3G08690.1 93.243 148 10 0 1 148 1 148 2.82e-104 294
Msa0735620 AT1G64230.3 90.446 157 6 1 1 148 1 157 2.29e-103 292
Msa0735620 AT5G56150.1 88.514 148 17 0 1 148 1 148 5.54e-100 283
Msa0735620 AT1G64230.5 74.737 190 6 1 1 148 1 190 6.21e-99 282
Msa0735620 AT1G64230.4 74.737 190 6 1 1 148 1 190 6.21e-99 282
Msa0735620 AT2G16740.1 87.075 147 19 0 1 147 1 147 3.55e-98 279
Msa0735620 AT3G08700.2 79.195 149 30 1 1 148 1 149 3.19e-87 251
Msa0735620 AT3G08700.1 79.195 149 30 1 1 148 1 149 3.19e-87 251
Msa0735620 AT5G41700.3 96.154 104 4 0 1 104 1 104 1.21e-72 214
Msa0735620 AT5G53300.3 92.661 109 6 1 1 107 1 109 4.14e-71 209
Msa0735620 AT5G56150.2 86.408 103 14 0 1 103 1 103 1.58e-65 195
Msa0735620 AT3G13550.1 48.276 145 75 0 2 146 37 181 2.36e-53 167
Msa0735620 AT1G16890.2 50.345 145 72 0 4 148 8 152 7.49e-49 154
Msa0735620 AT1G78870.2 49.655 145 73 0 4 148 8 152 6.88e-48 152
Msa0735620 AT1G16890.3 48.052 154 71 1 4 148 8 161 3.51e-46 148
Msa0735620 AT5G62540.1 49.254 134 68 0 2 135 5 138 6.65e-46 147
Msa0735620 AT1G14400.1 46.575 146 73 1 2 142 5 150 1.42e-45 146
Msa0735620 AT1G14400.2 46.575 146 73 1 2 142 5 150 1.42e-45 146
Msa0735620 AT2G02760.1 45.890 146 74 1 2 142 5 150 3.12e-45 145
Msa0735620 AT2G02760.2 45.890 146 74 1 2 142 5 150 3.12e-45 145
Msa0735620 AT2G02760.4 45.890 146 74 1 2 142 5 150 3.12e-45 145
Msa0735620 AT2G02760.3 45.890 146 74 1 2 142 5 150 3.12e-45 145
Msa0735620 AT1G36340.2 48.966 145 73 1 2 146 9 152 3.95e-45 145
Msa0735620 AT1G36340.1 48.966 145 73 1 2 146 9 152 3.95e-45 145
Msa0735620 AT3G13550.2 50.000 114 57 0 2 115 37 150 3.12e-42 138
Msa0735620 AT1G16890.1 52.941 119 56 0 30 148 1 119 1.04e-41 135
Msa0735620 AT1G78870.4 52.941 119 56 0 30 148 1 119 1.82e-41 134
Msa0735620 AT1G78870.1 52.500 120 56 1 30 148 1 120 1.08e-39 130
Msa0735620 AT5G50870.1 45.833 144 76 2 5 146 6 149 1.99e-39 132
Msa0735620 AT2G32790.1 49.342 152 68 4 2 148 30 177 2.39e-36 123
Msa0735620 AT5G50870.2 42.581 155 76 3 5 146 6 160 5.10e-36 123
Msa0735620 AT3G24515.1 43.949 157 75 3 3 146 8 164 1.03e-34 125
Msa0735620 AT5G25760.1 38.776 147 86 3 5 147 7 153 1.24e-32 113
Msa0735620 AT5G25760.2 38.776 147 86 3 5 147 7 153 1.24e-32 113
Msa0735620 AT1G78870.3 48.571 105 54 0 4 108 8 112 2.19e-32 111
Msa0735620 AT3G24515.3 45.902 122 62 1 29 146 68 189 4.44e-32 118
Msa0735620 AT3G20060.1 42.742 124 71 0 4 127 39 162 8.43e-31 109
Msa0735620 AT1G50490.1 43.548 124 70 0 4 127 38 161 2.37e-30 108
Msa0735620 AT3G20060.2 43.636 110 62 0 22 131 12 121 3.08e-29 104
Msa0735620 AT2G46030.5 37.162 148 90 3 1 146 1 147 5.94e-29 105
Msa0735620 AT2G46030.1 37.162 148 90 3 1 146 1 147 5.94e-29 105
Msa0735620 AT2G46030.3 37.162 148 90 3 1 146 73 219 1.49e-28 105
Msa0735620 AT2G46030.4 39.837 123 72 2 26 146 28 150 2.22e-28 103
Msa0735620 AT2G46030.2 39.837 123 72 2 26 146 28 150 2.22e-28 103
Msa0735620 AT3G57870.1 34.868 152 92 2 1 145 5 156 4.76e-28 102
Msa0735620 AT5G05080.2 37.063 143 90 0 4 146 13 155 1.10e-27 103
Msa0735620 AT5G05080.3 37.063 143 90 0 4 146 13 155 1.10e-27 103
Msa0735620 AT5G05080.1 37.063 143 90 0 4 146 13 155 1.10e-27 103
Msa0735620 AT5G05080.4 37.063 143 90 0 4 146 13 155 1.10e-27 103
Msa0735620 AT3G55380.1 37.313 134 70 2 15 134 19 152 1.98e-27 100
Msa0735620 AT5G41340.1 38.211 123 74 2 26 146 25 147 8.98e-27 99.4
Msa0735620 AT1G63800.2 38.211 123 74 2 26 146 10 132 1.11e-26 98.6
Msa0735620 AT1G63800.1 38.211 123 74 2 26 146 25 147 1.22e-26 99.0
Msa0735620 AT5G59300.1 34.722 144 80 2 15 144 18 161 3.02e-25 95.1
Msa0735620 AT4G36800.2 35.036 137 84 3 5 139 34 167 4.38e-25 95.1
Msa0735620 AT4G36800.1 35.036 137 84 3 5 139 34 167 4.38e-25 95.1
Msa0735620 AT3G46460.1 34.028 144 81 2 15 144 18 161 5.36e-25 94.4
Msa0735620 AT5G41340.2 40.385 104 60 2 45 146 9 112 1.24e-23 90.5
Msa0735620 AT2G18600.1 35.036 137 84 3 5 139 35 168 2.46e-23 90.5
Msa0735620 AT2G18600.2 35.036 137 84 3 5 139 35 168 2.46e-23 90.5
Msa0735620 AT3G17000.1 36.975 119 65 4 2 114 12 126 2.10e-20 85.5
Msa0735620 AT3G55380.2 29.586 169 71 3 15 135 19 187 3.27e-20 82.8
Msa0735620 AT1G75440.1 37.963 108 61 3 1 107 15 117 3.94e-18 76.6
Msa0735620 AT1G45050.1 36.893 103 63 2 1 102 15 116 1.22e-17 75.1
Msa0735620 AT5G42990.1 37.864 103 62 2 1 102 15 116 1.97e-17 74.7
Msa0735620 AT3G46460.3 30.631 111 64 1 47 144 9 119 1.49e-16 71.2
Msa0735620 AT3G46460.2 30.631 111 64 1 47 144 9 119 1.49e-16 71.2
Msa0735620 AT1G17280.9 33.333 117 69 3 4 115 8 120 1.70e-16 73.9
Msa0735620 AT1G17280.7 33.333 117 69 3 4 115 8 120 1.70e-16 73.9
Msa0735620 AT1G17280.6 33.333 117 69 3 4 115 8 120 1.70e-16 73.9
Msa0735620 AT1G17280.2 33.333 117 69 3 4 115 8 120 1.70e-16 73.9
Msa0735620 AT1G17280.5 33.333 117 69 3 4 115 8 120 1.70e-16 73.9
Msa0735620 AT1G17280.3 33.333 117 69 3 4 115 8 120 1.70e-16 73.9
Msa0735620 AT1G17280.1 33.333 117 69 3 4 115 8 120 1.70e-16 73.9
Msa0735620 AT1G17280.8 33.333 117 69 3 4 115 8 120 1.70e-16 73.9
Msa0735620 AT4G36410.1 34.259 108 65 3 1 107 15 117 1.72e-16 72.0
Msa0735620 AT5G50430.1 33.333 117 69 3 4 115 8 120 1.95e-16 73.6
Msa0735620 AT5G50430.2 33.333 117 69 3 4 115 8 120 1.95e-16 73.6
Msa0735620 AT1G17280.4 30.894 123 70 3 4 115 8 126 3.99e-15 70.1
Msa0735620 AT3G15355.1 28.947 152 95 4 3 144 334 482 3.26e-12 63.2
Msa0735620 AT1G53025.2 30.328 122 75 3 4 115 274 395 2.83e-11 60.5
Msa0735620 AT1G53025.1 30.328 122 75 3 4 115 274 395 3.16e-11 60.5
Msa0735620 AT1G45050.2 33.708 89 57 2 1 88 15 102 5.36e-11 56.6
Msa0735620 AT1G53023.1 31.148 122 74 3 4 115 60 181 7.11e-11 59.3

Find 89 sgRNAs with CRISPR-Local

Find 399 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CTAGGAAATGGCTTATTATT+TGG 0.110923 5_1:-51080410 Msa0735620:three_prime_UTR
CAATATTCACAATTGATAAA+TGG 0.173693 5_1:+51080507 None:intergenic
TATTATTTGGATTGTGTTGT+AGG 0.216327 5_1:-51080397 Msa0735620:three_prime_UTR
TTGTACATGTGTGCAATTTC+AGG 0.243362 5_1:+51080724 None:intergenic
TATTTAAGTTTGAGTGATTA+TGG 0.283035 5_1:-51085426 Msa0735620:intron
ATATACTGGTGGTGTGTTCC+TGG 0.285935 5_1:-51083596 Msa0735620:CDS
CTGCCATTACTGTTGATGTT+TGG 0.288456 5_1:+51081099 None:intergenic
AGGAACACACCACCAGTATA+TGG 0.290101 5_1:+51083598 None:intergenic
TGCCATTACTGTTGATGTTT+GGG 0.308240 5_1:+51081100 None:intergenic
ATGCCATCTTTATTGTTTAG+TGG 0.346543 5_1:-51080555 Msa0735620:three_prime_UTR
ACAAGTGGATCATCGGGGTT+GGG 0.347133 5_1:+51080748 None:intergenic
GTCAATTTGCTCGTTGTTGA+CGG 0.355439 5_1:-51080773 Msa0735620:CDS
AACCTGCACTGCATGAAGTT+GGG 0.370343 5_1:+51085357 None:intergenic
TGGAAGAAGAATGAATGATT+TGG 0.378241 5_1:+51085590 None:intergenic
ATTCTTGAAAATCAAAGAAA+TGG 0.380237 5_1:+51085704 None:intergenic
GCGAGCTGTGGCTTCATACT+TGG 0.382810 5_1:+51080690 None:intergenic
AATCTTTGTGCTTGTTGACC+TGG 0.402263 5_1:-51080442 Msa0735620:three_prime_UTR
AATATTCACAATTGATAAAT+GGG 0.410961 5_1:+51080508 None:intergenic
TTGGATTGTGTTGTAGGTCT+TGG 0.411170 5_1:-51080391 Msa0735620:three_prime_UTR
GGATGTGGATTAAGATCAAA+TGG 0.422664 5_1:+51080296 None:intergenic
TCAGGAACAAGTGGATCATC+GGG 0.432078 5_1:+51080742 None:intergenic
GAATACCTTTGGTGGCTTGA+AGG 0.432336 5_1:+51083546 None:intergenic
GTAATATCAAACCTTGGAAA+TGG 0.433618 5_1:+51081032 None:intergenic
ACCTTGGAAATGGTTAAAGC+TGG 0.447093 5_1:+51081042 None:intergenic
ATGAAGCCACAGCTCGCAGC+TGG 0.457816 5_1:-51080684 Msa0735620:CDS
TTGACCTGGTATTCCTAGCT+AGG 0.463411 5_1:-51080428 Msa0735620:three_prime_UTR
TGGTATTCCTAGCTAGGAAA+TGG 0.465221 5_1:-51080422 Msa0735620:three_prime_UTR
AGTGGAACTTGAAGCTGGTA+AGG 0.470147 5_1:-51080537 Msa0735620:three_prime_UTR
TTCTTCCACGCTTCCGACCC+AGG 0.471097 5_1:-51085575 Msa0735620:intron
TAATAAGCCATTTCCTAGCT+AGG 0.471718 5_1:+51080415 None:intergenic
CCGGCTGATAGCCCATATAC+TGG 0.473020 5_1:-51083610 Msa0735620:CDS
AATACCTTTGGTGGCTTGAA+GGG 0.473573 5_1:+51083547 None:intergenic
GGTGGCTTGAAGGGATAGTC+AGG 0.473711 5_1:+51083556 None:intergenic
AACAAGTGGATCATCGGGGT+TGG 0.475495 5_1:+51080747 None:intergenic
TTCAGGAACAAGTGGATCAT+CGG 0.479213 5_1:+51080741 None:intergenic
AAACCTGCACTGCATGAAGT+TGG 0.486829 5_1:+51085356 None:intergenic
CACTGGCAAGCCACAATCAT+GGG 0.492054 5_1:-51083634 Msa0735620:CDS
AGAATGAATGATTTGGAGAA+GGG 0.495620 5_1:+51085597 None:intergenic
CAAGTGGATCATCGGGGTTG+GGG 0.503531 5_1:+51080749 None:intergenic
GATTTGGAGAAGGGTGAAGG+AGG 0.506835 5_1:+51085606 None:intergenic
GGCTTCATACTTGGCCCTGT+CGG 0.512375 5_1:+51080699 None:intergenic
TGTTTAGTGGAACTTGAAGC+TGG 0.513586 5_1:-51080542 Msa0735620:three_prime_UTR
GGAACACACCACCAGTATAT+GGG 0.514259 5_1:+51083599 None:intergenic
TATATCAGGTCCTGTGGCTG+AGG 0.520756 5_1:-51083665 Msa0735620:intron
ACCTGCACTGCATGAAGTTG+GGG 0.521550 5_1:+51085358 None:intergenic
GGCGTCGAAACGAATCTTGA+AGG 0.526427 5_1:-51085405 Msa0735620:CDS
CCACTGGCAAGCCACAATCA+TGG 0.528486 5_1:-51083635 Msa0735620:CDS
AAGAATGAATGATTTGGAGA+AGG 0.530077 5_1:+51085596 None:intergenic
GTTCCACTAAACAATAAAGA+TGG 0.532133 5_1:+51080552 None:intergenic
ACAACGAGCAAATTGACAAA+AGG 0.532368 5_1:+51080779 None:intergenic
CCCAGCTTTAACCATTTCCA+AGG 0.532924 5_1:-51081043 Msa0735620:intron
GCAAGCCACAATCATGGGAC+CGG 0.541067 5_1:-51083629 Msa0735620:CDS
CACACATGTACAAGACCGAC+AGG 0.541851 5_1:-51080714 Msa0735620:CDS
TGGCTGAGGACATGTTCCAC+TGG 0.551041 5_1:-51083651 Msa0735620:CDS
GCAGGGTAGAATACCTTTGG+TGG 0.551279 5_1:+51083538 None:intergenic
TGGAACATGTCCTCAGCCAC+AGG 0.551736 5_1:+51083655 None:intergenic
ATCAGCCGGTCCCATGATTG+TGG 0.551941 5_1:+51083624 None:intergenic
CACCCAAACATCAACAGTAA+TGG 0.557095 5_1:-51081102 Msa0735620:CDS
ACAAACCTGGGTCGGAAGCG+TGG 0.557176 5_1:+51085570 None:intergenic
GTGGAACTTGAAGCTGGTAA+GGG 0.557221 5_1:-51080536 Msa0735620:three_prime_UTR
AATGATTTGGAGAAGGGTGA+AGG 0.559376 5_1:+51085603 None:intergenic
CTGTGTCCAGCTGCGAGCTG+TGG 0.570255 5_1:+51080678 None:intergenic
ATTCACAATTGATAAATGGG+TGG 0.570929 5_1:+51080511 None:intergenic
ATTTCCTAGCTAGGAATACC+AGG 0.572459 5_1:+51080424 None:intergenic
CCTTGGAAATGGTTAAAGCT+GGG 0.572832 5_1:+51081043 None:intergenic
ACGAATCTTGAAGGAGCTCA+AGG 0.573806 5_1:-51085396 Msa0735620:CDS
TTCACAATTGATAAATGGGT+GGG 0.583857 5_1:+51080512 None:intergenic
CCATGATTGTGGCTTGCCAG+TGG 0.587184 5_1:+51083635 None:intergenic
CATTACTGTTGATGTTTGGG+TGG 0.591313 5_1:+51081103 None:intergenic
GATGTTTGGGTGGAACACCT+TGG 0.592752 5_1:+51081113 None:intergenic
CCAGTATATGGGCTATCAGC+CGG 0.596648 5_1:+51083610 None:intergenic
GCTGCTCTTATTGAACAGCT+AGG 0.596651 5_1:+51080627 None:intergenic
CTGGACACAGAAGTATGCCA+TGG 0.597546 5_1:-51080665 Msa0735620:CDS
GTTGTTTATATCAGGTCCTG+TGG 0.599795 5_1:-51083671 Msa0735620:intron
TGTGCAATTTCAGGAACAAG+TGG 0.608694 5_1:+51080733 None:intergenic
TATATGTCTCGACATTCTGA+AGG 0.618427 5_1:-51081076 Msa0735620:CDS
CTATCCCTTCAAGCCACCAA+AGG 0.619090 5_1:-51083551 Msa0735620:intron
GAGGAAAATGAATTGAAACC+AGG 0.619103 5_1:+51083578 None:intergenic
TTGTAAGACACTTGTTATCG+AGG 0.620922 5_1:-51080482 Msa0735620:three_prime_UTR
CCTGCACTGCATGAAGTTGG+GGG 0.626857 5_1:+51085359 None:intergenic
GGAGCTCAAGGATTTGCAGA+AGG 0.628349 5_1:-51085384 Msa0735620:CDS
TGGACACAGAAGTATGCCAT+GGG 0.652544 5_1:-51080664 Msa0735620:CDS
GGACAAACATGATCATCCCA+TGG 0.655565 5_1:+51080648 None:intergenic
GGCTTGAAGGGATAGTCAGG+AGG 0.665116 5_1:+51083559 None:intergenic
TCGACATTCTGAAGGAACAG+TGG 0.672640 5_1:-51081068 Msa0735620:CDS
CTGCACTGCATGAAGTTGGG+GGG 0.679610 5_1:+51085360 None:intergenic
ACACATGTACAAGACCGACA+GGG 0.717087 5_1:-51080713 Msa0735620:CDS
GCTGATAGCCCATATACTGG+TGG 0.737012 5_1:-51083607 Msa0735620:CDS
CAGGAACAAGTGGATCATCG+GGG 0.748108 5_1:+51080743 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TTTTTATATTTTTCTTTGAA+TGG + chr5_1:51080364-51080383 None:intergenic 10.0%
!!! CAAATTTTTAATAAAAAAAG+GGG + chr5_1:51080721-51080740 None:intergenic 10.0%
!!! TTTTCTTAAAACTTTTATAT+TGG - chr5_1:51080742-51080761 Msa0735620:CDS 10.0%
!!! AAAATTGCAAATTTTCAAAT+AGG + chr5_1:51081090-51081109 None:intergenic 15.0%
!! TGTATATTAGTAGAAAAATA+TGG + chr5_1:51081130-51081149 None:intergenic 15.0%
!!! TAAATTTGTTTCTTCTAAAA+TGG - chr5_1:51081375-51081394 Msa0735620:intron 15.0%
!!! TGTAATTTTTATCCATAAAA+TGG - chr5_1:51081416-51081435 Msa0735620:intron 15.0%
!!! GTAATTTTTATCCATAAAAT+GGG - chr5_1:51081417-51081436 Msa0735620:intron 15.0%
!!! TCTTTTTTTAAAATTTTGCT+TGG - chr5_1:51081485-51081504 Msa0735620:intron 15.0%
!! GCTTAAAAAAAAGATATAAA+TGG + chr5_1:51081675-51081694 None:intergenic 15.0%
!! AATAAAATGAAAATATAACC+CGG - chr5_1:51081739-51081758 Msa0735620:intron 15.0%
!! TGTTATAATATGTATGTTAA+TGG - chr5_1:51081898-51081917 Msa0735620:intron 15.0%
!! GAATAATTAATAACTAAACA+TGG - chr5_1:51082323-51082342 Msa0735620:intron 15.0%
!! CAACTATAAAATATTATGTA+AGG + chr5_1:51083086-51083105 None:intergenic 15.0%
!!! TACATAATATTTTATAGTTG+AGG - chr5_1:51083086-51083105 Msa0735620:intron 15.0%
!!! ACATAATATTTTATAGTTGA+GGG - chr5_1:51083087-51083106 Msa0735620:intron 15.0%
!! TTTCTATATTAAAATCATAG+AGG - chr5_1:51083972-51083991 Msa0735620:intron 15.0%
!! AATATTCACAATTGATAAAT+GGG + chr5_1:51085525-51085544 None:intergenic 15.0%
!! ATTCTTGAAAATCAAAGAAA+TGG + chr5_1:51080329-51080348 None:intergenic 20.0%
!! AAAAAGTTGAAGAATTGAAA+GGG + chr5_1:51080507-51080526 None:intergenic 20.0%
!! AAAAAAGTTGAAGAATTGAA+AGG + chr5_1:51080508-51080527 None:intergenic 20.0%
!! GATAAATGGTTAAAAATGAA+TGG + chr5_1:51080550-51080569 None:intergenic 20.0%
!!! TATTTAAGTTTGAGTGATTA+TGG - chr5_1:51080604-51080623 Msa0735620:three_prime_UTR 20.0%
!! TTTAATAAAAAAAGGGGAAA+TGG + chr5_1:51080715-51080734 None:intergenic 20.0%
!!! TCATTTTATTTGCTGAAAAA+TGG + chr5_1:51081729-51081748 None:intergenic 20.0%
!! ATAAAATGAAAATATAACCC+GGG - chr5_1:51081740-51081759 Msa0735620:intron 20.0%
!! GAAAATGATAAATGTTTGAA+GGG - chr5_1:51081920-51081939 Msa0735620:intron 20.0%
!! AAAATGATAAATGTTTGAAG+GGG - chr5_1:51081921-51081940 Msa0735620:intron 20.0%
!!! AAATGAGACATACATTTTAT+AGG - chr5_1:51082093-51082112 Msa0735620:intron 20.0%
!! AAAGGTAAATATATGCTAAA+GGG + chr5_1:51082219-51082238 None:intergenic 20.0%
!! AAAAGGTAAATATATGCTAA+AGG + chr5_1:51082220-51082239 None:intergenic 20.0%
!! GATGAAATAACATATACAAA+AGG + chr5_1:51082237-51082256 None:intergenic 20.0%
!! TAATTATTCTTCAGAAGAAA+AGG + chr5_1:51082312-51082331 None:intergenic 20.0%
!! CCAAAAATAATTTGAGAAAA+CGG + chr5_1:51082852-51082871 None:intergenic 20.0%
!!! CATAATATTTTATAGTTGAG+GGG - chr5_1:51083088-51083107 Msa0735620:intron 20.0%
!! TCATTTATAATCATGGTTAT+GGG - chr5_1:51083516-51083535 Msa0735620:intron 20.0%
!! GAAAACACATTACATATATA+TGG + chr5_1:51083922-51083941 None:intergenic 20.0%
!!! GTTTTAGTTAAGAAATTCAT+TGG - chr5_1:51084056-51084075 Msa0735620:intron 20.0%
!! CAATATTCACAATTGATAAA+TGG + chr5_1:51085526-51085545 None:intergenic 20.0%
! AATTGAAAGGGAAAATGAAA+AGG + chr5_1:51080495-51080514 None:intergenic 25.0%
! ATTATGAGACAAGTGATAAA+TGG + chr5_1:51080564-51080583 None:intergenic 25.0%
!!! TTGTTGATTTGTTGTGTTTA+TGG - chr5_1:51080801-51080820 Msa0735620:intron 25.0%
! AAAATAACCTATAACATGCT+TGG - chr5_1:51080910-51080929 Msa0735620:intron 25.0%
! AAATATGGTCAAACTAAGTT+AGG + chr5_1:51081115-51081134 None:intergenic 25.0%
! TTAAGCTCAAAATTATGCAT+TGG - chr5_1:51081251-51081270 Msa0735620:intron 25.0%
! TGAAGAAACAATGAACAATT+AGG + chr5_1:51081326-51081345 None:intergenic 25.0%
! CGCATAACTTATTAATGATT+TGG + chr5_1:51081636-51081655 None:intergenic 25.0%
! ATCATTAATAAGTTATGCGA+TGG - chr5_1:51081637-51081656 Msa0735620:intron 25.0%
!!! TTTTTTAAGCCTGAAATACT+AGG - chr5_1:51081685-51081704 Msa0735620:intron 25.0%
! TAAAATGAAAATATAACCCG+GGG - chr5_1:51081741-51081760 Msa0735620:intron 25.0%
! GGAAAATGATAAATGTTTGA+AGG - chr5_1:51081919-51081938 Msa0735620:intron 25.0%
!!! TGATTTGTTTGTAATTAGCT+TGG - chr5_1:51082279-51082298 Msa0735620:intron 25.0%
!! GATTTGTTTGTAATTAGCTT+GGG - chr5_1:51082280-51082299 Msa0735620:intron 25.0%
!! ATTTGTTTGTAATTAGCTTG+GGG - chr5_1:51082281-51082300 Msa0735620:intron 25.0%
!!! TTGTTGTTGTTGTTTATATC+AGG - chr5_1:51082351-51082370 Msa0735620:intron 25.0%
!!! TTCAAAAGCATTTTGATTCA+AGG - chr5_1:51082682-51082701 Msa0735620:intron 25.0%
!! CCGTTTTCTCAAATTATTTT+TGG - chr5_1:51082849-51082868 Msa0735620:intron 25.0%
!!! TTGTTTTTCTCTTTTGTTGT+GGG - chr5_1:51083246-51083265 Msa0735620:intron 25.0%
! GTCATTTATAATCATGGTTA+TGG - chr5_1:51083515-51083534 Msa0735620:intron 25.0%
!!! GTTTTTTCCTTTTCATGATT+GGG - chr5_1:51083612-51083631 Msa0735620:CDS 25.0%
!! ATTTTTACCCAATCATGAAA+AGG + chr5_1:51083622-51083641 None:intergenic 25.0%
! CATGATTGGGTAAAAATATT+TGG - chr5_1:51083625-51083644 Msa0735620:CDS 25.0%
!! CTTTTCATAAACTCTATTAG+TGG + chr5_1:51083680-51083699 None:intergenic 25.0%
! CTAATAGAGTTTATGAAAAG+AGG - chr5_1:51083680-51083699 Msa0735620:intron 25.0%
! TTTCTAACAATCACTCTTAT+TGG - chr5_1:51083721-51083740 Msa0735620:intron 25.0%
! TTCTAACAATCACTCTTATT+GGG - chr5_1:51083722-51083741 Msa0735620:intron 25.0%
! TTATTGAATAAAATCCACGT+GGG + chr5_1:51083753-51083772 None:intergenic 25.0%
! TGTATATTGTTTAGATACAG+AGG - chr5_1:51084290-51084309 Msa0735620:intron 25.0%
!!! TTTCTCGTAGATTTTTGTTT+CGG - chr5_1:51084588-51084607 Msa0735620:intron 25.0%
! AAATATACTACGACAATACT+CGG + chr5_1:51085116-51085135 None:intergenic 25.0%
!! CTTTTACGTAAATTATGACA+TGG + chr5_1:51085428-51085447 None:intergenic 25.0%
! TATTATTTGGATTGTGTTGT+AGG - chr5_1:51085633-51085652 Msa0735620:five_prime_UTR 25.0%
! AGAATGAATGATTTGGAGAA+GGG + chr5_1:51080436-51080455 None:intergenic 30.0%
! AAGAATGAATGATTTGGAGA+AGG + chr5_1:51080437-51080456 None:intergenic 30.0%
TGGAAGAAGAATGAATGATT+TGG + chr5_1:51080443-51080462 None:intergenic 30.0%
!!! TCTTCAACTTTTTTCGTTTC+TGG - chr5_1:51080514-51080533 Msa0735620:three_prime_UTR 30.0%
!!! CTTCAACTTTTTTCGTTTCT+GGG - chr5_1:51080515-51080534 Msa0735620:three_prime_UTR 30.0%
!! TGATTTGTTGTGTTTATGGA+TGG - chr5_1:51080805-51080824 Msa0735620:intron 30.0%
! GGATAAGGAAATTGTGATTT+TGG - chr5_1:51080957-51080976 Msa0735620:intron 30.0%
! TGATAATGCGTTATTGATTG+TGG - chr5_1:51080987-51081006 Msa0735620:intron 30.0%
! ATAGGTAGAATCCCATTTTA+TGG + chr5_1:51081431-51081450 None:intergenic 30.0%
TAATAAGTTATGCGATGGAA+TGG - chr5_1:51081642-51081661 Msa0735620:intron 30.0%
GAATTCAAACCTAGTATTTC+AGG + chr5_1:51081697-51081716 None:intergenic 30.0%
AAAATGAAAATATAACCCGG+GGG - chr5_1:51081742-51081761 Msa0735620:intron 30.0%
TAGAATCAACGTTAATCCAA+CGG + chr5_1:51081816-51081835 None:intergenic 30.0%
!! GGATTAACGTTGATTCTATT+TGG - chr5_1:51081818-51081837 Msa0735620:intron 30.0%
!! TAACGTTGATTCTATTTGGA+AGG - chr5_1:51081822-51081841 Msa0735620:intron 30.0%
TGTCTGTAATCAATTGTTTG+TGG - chr5_1:51082017-51082036 Msa0735620:intron 30.0%
! TAGTTGATACGTACATTTGT+TGG - chr5_1:51082056-51082075 Msa0735620:intron 30.0%
! TACGTACATTTGTTGGAATT+TGG - chr5_1:51082063-51082082 Msa0735620:intron 30.0%
TCTTCTTGAAGTTGTATCTA+TGG - chr5_1:51082617-51082636 Msa0735620:intron 30.0%
GTGACTGTGAACTTATTATT+TGG - chr5_1:51082711-51082730 Msa0735620:intron 30.0%
GAAGTTGTCTTCTTTGTAAA+AGG - chr5_1:51083187-51083206 Msa0735620:intron 30.0%
TCTTCTTTGTAAAAGGCAAA+TGG - chr5_1:51083194-51083213 Msa0735620:intron 30.0%
!! CTTGTTTTTCTCTTTTGTTG+TGG - chr5_1:51083245-51083264 Msa0735620:intron 30.0%
!!! TTTTGTTGACTTAGTTTCCT+AGG - chr5_1:51083271-51083290 Msa0735620:intron 30.0%
GAAAAATACAAGAGTGGATA+AGG + chr5_1:51083410-51083429 None:intergenic 30.0%
! TATAAATGACTTGCACAACA+TGG + chr5_1:51083505-51083524 None:intergenic 30.0%
GTGCAAGTCATTTATAATCA+TGG - chr5_1:51083509-51083528 Msa0735620:intron 30.0%
! AGATTAAGAGTAGAGTACTA+TGG - chr5_1:51083565-51083584 Msa0735620:CDS 30.0%
! GATTAAGAGTAGAGTACTAT+GGG - chr5_1:51083566-51083585 Msa0735620:CDS 30.0%
!!! GGTTTTTTCCTTTTCATGAT+TGG - chr5_1:51083611-51083630 Msa0735620:CDS 30.0%
CTTATTGAATAAAATCCACG+TGG + chr5_1:51083754-51083773 None:intergenic 30.0%
!! AGTGTTAAGAGAGTGTTATA+AGG - chr5_1:51083774-51083793 Msa0735620:intron 30.0%
TCTAAGTATAGATCTAGACA+TGG - chr5_1:51084109-51084128 Msa0735620:intron 30.0%
TGCTAAGAAAAGTGGAAATT+AGG - chr5_1:51084207-51084226 Msa0735620:intron 30.0%
TTGTTTAGATACAGAGGAAA+TGG - chr5_1:51084296-51084315 Msa0735620:intron 30.0%
! TTTAATCGTCTCTGATTTGT+TGG - chr5_1:51084327-51084346 Msa0735620:intron 30.0%
! TTTGTTGGTTGAACAGAAAA+TGG - chr5_1:51084342-51084361 Msa0735620:intron 30.0%
TCAAAACTCAGAAATTGTGA+AGG + chr5_1:51084386-51084405 None:intergenic 30.0%
!! TCACAATTTCTGAGTTTTGA+AGG - chr5_1:51084386-51084405 Msa0735620:intron 30.0%
ATTAATATACACCGTTAAGG+TGG + chr5_1:51084445-51084464 None:intergenic 30.0%
AGTAGGTTATGATTATTGCA+AGG + chr5_1:51084484-51084503 None:intergenic 30.0%
GATAGAAAAGGATAAGACAT+GGG + chr5_1:51084520-51084539 None:intergenic 30.0%
!!! CCTATTTTTATCTGTTTTGG+CGG - chr5_1:51084545-51084564 Msa0735620:intron 30.0%
!!! CTATTTTTATCTGTTTTGGC+GGG - chr5_1:51084546-51084565 Msa0735620:intron 30.0%
!! TTCTCGTAGATTTTTGTTTC+GGG - chr5_1:51084589-51084608 Msa0735620:intron 30.0%
AGATAGCTATAAAAACAGAC+TGG + chr5_1:51084677-51084696 None:intergenic 30.0%
AGAAAATCCTACTGTAAGTT+GGG + chr5_1:51084766-51084785 None:intergenic 30.0%
TAGAAAATCCTACTGTAAGT+TGG + chr5_1:51084767-51084786 None:intergenic 30.0%
GTAATATCAAACCTTGGAAA+TGG + chr5_1:51085001-51085020 None:intergenic 30.0%
CATTATCTATGTTCAGTAAG+TGG + chr5_1:51085043-51085062 None:intergenic 30.0%
! TGTCGTAGTATATTTTCAGT+TGG - chr5_1:51085121-51085140 Msa0735620:intron 30.0%
! GTCGTAGTATATTTTCAGTT+GGG - chr5_1:51085122-51085141 Msa0735620:intron 30.0%
AATTATAACTGGCTAATGCT+CGG + chr5_1:51085157-51085176 None:intergenic 30.0%
! GCATTAGCCAGTTATAATTT+TGG - chr5_1:51085158-51085177 Msa0735620:intron 30.0%
ACTTGCACCAAAATTATAAC+TGG + chr5_1:51085168-51085187 None:intergenic 30.0%
! GGTGCAAGTTTTACTTATAA+AGG - chr5_1:51085179-51085198 Msa0735620:intron 30.0%
! GAAACTAATCCCTCTATTTT+AGG - chr5_1:51085227-51085246 Msa0735620:intron 30.0%
ACAAAAGGACCTAAAATAGA+GGG + chr5_1:51085239-51085258 None:intergenic 30.0%
ATGCCATCTTTATTGTTTAG+TGG - chr5_1:51085475-51085494 Msa0735620:intron 30.0%
GTTCCACTAAACAATAAAGA+TGG + chr5_1:51085481-51085500 None:intergenic 30.0%
TTCACAATTGATAAATGGGT+GGG + chr5_1:51085521-51085540 None:intergenic 30.0%
ATTCACAATTGATAAATGGG+TGG + chr5_1:51085522-51085541 None:intergenic 30.0%
CTAGGAAATGGCTTATTATT+TGG - chr5_1:51085620-51085639 Msa0735620:five_prime_UTR 30.0%
AGGAGAAGAAAAACAAACCT+GGG + chr5_1:51080475-51080494 None:intergenic 35.0%
AAGGAGAAGAAAAACAAACC+TGG + chr5_1:51080476-51080495 None:intergenic 35.0%
! TAATGCGTTATTGATTGTGG+TGG - chr5_1:51080990-51081009 Msa0735620:intron 35.0%
TCAAATAGGTCATCTAATGC+AGG + chr5_1:51081076-51081095 None:intergenic 35.0%
TCAACCGTGTCATGTATTAT+GGG - chr5_1:51081288-51081307 Msa0735620:intron 35.0%
! TCTAAAACCAATGCACACAA+AGG + chr5_1:51081529-51081548 None:intergenic 35.0%
!!! TTGTGTGCATTGGTTTTAGA+TGG - chr5_1:51081529-51081548 Msa0735620:intron 35.0%
!!! TGCATTGGTTTTAGATGGTT+AGG - chr5_1:51081534-51081553 Msa0735620:intron 35.0%
GTTCATTCCAGTGACTAATT+TGG - chr5_1:51081991-51082010 Msa0735620:intron 35.0%
AATCAATTGTTTGTGGAGCT+TGG - chr5_1:51082024-51082043 Msa0735620:intron 35.0%
ATCAATTGTTTGTGGAGCTT+GGG - chr5_1:51082025-51082044 Msa0735620:intron 35.0%
AAGGGAACTTATTAGAAGAG+AGG + chr5_1:51082201-51082220 None:intergenic 35.0%
GAGGAAAATGAATTGAAACC+AGG + chr5_1:51082455-51082474 None:intergenic 35.0%
CTAATGTGAGTAATGAAGCA+GGG + chr5_1:51082512-51082531 None:intergenic 35.0%
! TCTTGTATTGTCGTGCTTTT+TGG - chr5_1:51082534-51082553 Msa0735620:intron 35.0%
AAGAACATGTTGAATGAGAG+AGG + chr5_1:51082601-51082620 None:intergenic 35.0%
ACACCTTTCATCGAAAATGT+CGG + chr5_1:51082787-51082806 None:intergenic 35.0%
TGTAAGCATTTGTGCAAAAC+AGG + chr5_1:51082988-51083007 None:intergenic 35.0%
AAACTATTTGAGTACCCTTC+TGG + chr5_1:51083154-51083173 None:intergenic 35.0%
GTAAAAGGCAAATGGAAGTA+TGG - chr5_1:51083202-51083221 Msa0735620:intron 35.0%
!!! TTAGTTTCCTAGGAGCATTT+TGG - chr5_1:51083281-51083300 Msa0735620:intron 35.0%
!!! TAGTTTCCTAGGAGCATTTT+GGG - chr5_1:51083282-51083301 Msa0735620:intron 35.0%
AAAAGAAACCACATAGGGAT+GGG + chr5_1:51083379-51083398 None:intergenic 35.0%
CCTTCAAAAGAAACCACATA+GGG + chr5_1:51083384-51083403 None:intergenic 35.0%
TCCTTCAAAAGAAACCACAT+AGG + chr5_1:51083385-51083404 None:intergenic 35.0%
ACAGAGGAAAAATACAAGAG+TGG + chr5_1:51083416-51083435 None:intergenic 35.0%
TTCCTCTGTATTTCATGATG+CGG - chr5_1:51083427-51083446 Msa0735620:intron 35.0%
!!! AGGACATCAGAAGTTTTTTG+TGG - chr5_1:51083450-51083469 Msa0735620:intron 35.0%
!!! GGACATCAGAAGTTTTTTGT+GGG - chr5_1:51083451-51083470 Msa0735620:intron 35.0%
AGTACTCTACTCTTAATCTG+TGG + chr5_1:51083564-51083583 None:intergenic 35.0%
! TGGATTTCTCAGTCCATTTT+AGG - chr5_1:51083645-51083664 Msa0735620:CDS 35.0%
! TAGATCTAGACATGGTTCTA+TGG - chr5_1:51084117-51084136 Msa0735620:intron 35.0%
! AGATCTAGACATGGTTCTAT+GGG - chr5_1:51084118-51084137 Msa0735620:intron 35.0%
TTAGGATGCAAGAGGAAAAT+AGG - chr5_1:51084225-51084244 Msa0735620:intron 35.0%
AGCAAAATAGAGAGAAGAGA+GGG - chr5_1:51084251-51084270 Msa0735620:intron 35.0%
TTGGTTGAACAGAAAATGGA+TGG - chr5_1:51084346-51084365 Msa0735620:intron 35.0%
AAATGGATGGATGAGGAAAA+TGG - chr5_1:51084359-51084378 Msa0735620:intron 35.0%
GGGATTAATATACACCGTTA+AGG + chr5_1:51084448-51084467 None:intergenic 35.0%
TGGGAGAAACAAAAAACAGT+AGG + chr5_1:51084501-51084520 None:intergenic 35.0%
CGATAGAAAAGGATAAGACA+TGG + chr5_1:51084521-51084540 None:intergenic 35.0%
! TGTCTTATCCTTTTCTATCG+AGG - chr5_1:51084521-51084540 Msa0735620:intron 35.0%
! GTCTTATCCTTTTCTATCGA+GGG - chr5_1:51084522-51084541 Msa0735620:intron 35.0%
!!! GGGCCTATTTTTATCTGTTT+TGG - chr5_1:51084542-51084561 Msa0735620:intron 35.0%
CCGCCAAAACAGATAAAAAT+AGG + chr5_1:51084548-51084567 None:intergenic 35.0%
!! TCTCGTAGATTTTTGTTTCG+GGG - chr5_1:51084590-51084609 Msa0735620:intron 35.0%
!!! AAACTACTGCTGTTTTACTG+TGG - chr5_1:51084803-51084822 Msa0735620:intron 35.0%
! GTTTTACTGTGGTAGTAAGT+TGG - chr5_1:51084814-51084833 Msa0735620:intron 35.0%
TGCCATTACTGTTGATGTTT+GGG + chr5_1:51084933-51084952 None:intergenic 35.0%
TATATGTCTCGACATTCTGA+AGG - chr5_1:51084954-51084973 Msa0735620:intron 35.0%
AGCAGAGTAATATCAAACCT+TGG + chr5_1:51085007-51085026 None:intergenic 35.0%
!! ATAGAGGGATTAGTTTCTCT+GGG + chr5_1:51085224-51085243 None:intergenic 35.0%
!! AATAGAGGGATTAGTTTCTC+TGG + chr5_1:51085225-51085244 None:intergenic 35.0%
GACAAAAGGACCTAAAATAG+AGG + chr5_1:51085240-51085259 None:intergenic 35.0%
ACAACGAGCAAATTGACAAA+AGG + chr5_1:51085254-51085273 None:intergenic 35.0%
TTGTACATGTGTGCAATTTC+AGG + chr5_1:51085309-51085328 None:intergenic 35.0%
!! TTGTAAGACACTTGTTATCG+AGG - chr5_1:51085548-51085567 Msa0735620:intron 35.0%
TAATAAGCCATTTCCTAGCT+AGG + chr5_1:51085618-51085637 None:intergenic 35.0%
! AATGATTTGGAGAAGGGTGA+AGG + chr5_1:51080430-51080449 None:intergenic 40.0%
GAAGAAAAACAAACCTGGGT+CGG + chr5_1:51080471-51080490 None:intergenic 40.0%
!!! GGATCCGAGGTTTTAAATAG+CGG - chr5_1:51080931-51080950 Msa0735620:intron 40.0%
TTTAAATAGCGGTCGGGATA+AGG - chr5_1:51080942-51080961 Msa0735620:intron 40.0%
ATAGGTCATCTAATGCAGGA+CGG + chr5_1:51081072-51081091 None:intergenic 40.0%
! TATGCATTGGCATGCGTAAT+AGG - chr5_1:51081264-51081283 Msa0735620:intron 40.0%
! ATGCATTGGCATGCGTAATA+GGG - chr5_1:51081265-51081284 Msa0735620:intron 40.0%
GTCAACCGTGTCATGTATTA+TGG - chr5_1:51081287-51081306 Msa0735620:intron 40.0%
CGAAAACAGCTGCAACAAAA+CGG + chr5_1:51081455-51081474 None:intergenic 40.0%
!! TTTTGTTGCAGCTGTTTTCG+CGG - chr5_1:51081455-51081474 Msa0735620:intron 40.0%
!!! TGGTTTTAGATGGTTAGGTG+AGG - chr5_1:51081539-51081558 Msa0735620:intron 40.0%
!!! GGTTTTAGATGGTTAGGTGA+GGG - chr5_1:51081540-51081559 Msa0735620:intron 40.0%
AGGTGAGGGTTACATTATAG+CGG - chr5_1:51081554-51081573 Msa0735620:intron 40.0%
!! AGCTTGGTGGATTTCTTATG+AGG - chr5_1:51081580-51081599 Msa0735620:intron 40.0%
!! GCTTGGTGGATTTCTTATGA+GGG - chr5_1:51081581-51081600 Msa0735620:intron 40.0%
!! CTTGGTGGATTTCTTATGAG+GGG - chr5_1:51081582-51081601 Msa0735620:intron 40.0%
ATAAATGTTTGAAGGGGCCA+TGG - chr5_1:51081927-51081946 Msa0735620:intron 40.0%
GACACATCCAAATTAGTCAC+TGG + chr5_1:51082001-51082020 None:intergenic 40.0%
TCAATTGTTTGTGGAGCTTG+GGG - chr5_1:51082026-51082045 Msa0735620:intron 40.0%
GTTGTTTATATCAGGTCCTG+TGG - chr5_1:51082359-51082378 Msa0735620:intron 40.0%
! AATACCTTTGGTGGCTTGAA+GGG + chr5_1:51082486-51082505 None:intergenic 40.0%
CCTAATGTGAGTAATGAAGC+AGG + chr5_1:51082513-51082532 None:intergenic 40.0%
CCTGCTTCATTACTCACATT+AGG - chr5_1:51082510-51082529 Msa0735620:intron 40.0%
TGGTCTCCTTCATTCTTAAG+CGG - chr5_1:51082731-51082750 Msa0735620:intron 40.0%
!! GTACCGACATTTTCGATGAA+AGG - chr5_1:51082781-51082800 Msa0735620:intron 40.0%
TTCACTGCAATCACATGTCT+CGG + chr5_1:51082824-51082843 None:intergenic 40.0%
AAGGACAAAGACATTGGACA+CGG + chr5_1:51082886-51082905 None:intergenic 40.0%
TGAAGCAAGGACAAAGACAT+TGG + chr5_1:51082892-51082911 None:intergenic 40.0%
TGTCTTTGTCCTTGCTTCAT+AGG - chr5_1:51082893-51082912 Msa0735620:intron 40.0%
GTCTTTGTCCTTGCTTCATA+GGG - chr5_1:51082894-51082913 Msa0735620:intron 40.0%
AGAGTGAAAACCCTTGACAT+CGG - chr5_1:51083012-51083031 Msa0735620:intron 40.0%
! GTTGAGGGGTAGAATACTTT+TGG - chr5_1:51083102-51083121 Msa0735620:intron 40.0%
! AGGGGTAGAATACTTTTGGT+GGG - chr5_1:51083106-51083125 Msa0735620:intron 40.0%
TAAATTTGAAGGGGCCAGAA+GGG - chr5_1:51083137-51083156 Msa0735620:intron 40.0%
! AAGGCAAATGGAAGTATGGT+TGG - chr5_1:51083206-51083225 Msa0735620:intron 40.0%
! AGGCAAATGGAAGTATGGTT+GGG - chr5_1:51083207-51083226 Msa0735620:intron 40.0%
!!! AGTTTCCTAGGAGCATTTTG+GGG - chr5_1:51083283-51083302 Msa0735620:intron 40.0%
TCCTTCTGATGTGTATGCTT+TGG - chr5_1:51083332-51083351 Msa0735620:intron 40.0%
CCTTCTGATGTGTATGCTTT+GGG - chr5_1:51083333-51083352 Msa0735620:intron 40.0%
CTTCTGATGTGTATGCTTTG+GGG - chr5_1:51083334-51083353 Msa0735620:intron 40.0%
TTCTGATGTGTATGCTTTGG+GGG - chr5_1:51083335-51083354 Msa0735620:intron 40.0%
AAAGAAACCACATAGGGATG+GGG + chr5_1:51083378-51083397 None:intergenic 40.0%
CAAAAGAAACCACATAGGGA+TGG + chr5_1:51083380-51083399 None:intergenic 40.0%
! CCCTATGTGGTTTCTTTTGA+AGG - chr5_1:51083381-51083400 Msa0735620:intron 40.0%
! TAGAGAGATAACTTGCGTCT+AGG - chr5_1:51083590-51083609 Msa0735620:CDS 40.0%
GTGGACAACTTCTCCTAAAA+TGG + chr5_1:51083661-51083680 None:intergenic 40.0%
TTATTCGTAAGCGAGAGTCT+TGG - chr5_1:51083998-51084017 Msa0735620:intron 40.0%
TGTTCAGCACAATCTCATCT+TGG - chr5_1:51084178-51084197 Msa0735620:intron 40.0%
GGTCACTATGCTAAGAAAAG+TGG - chr5_1:51084199-51084218 Msa0735620:intron 40.0%
AGTGGAAATTAGGATGCAAG+AGG - chr5_1:51084217-51084236 Msa0735620:intron 40.0%
GAGCAAAATAGAGAGAAGAG+AGG - chr5_1:51084250-51084269 Msa0735620:intron 40.0%
GAGAGAAGAGAGGGAAAAAT+AGG - chr5_1:51084260-51084279 Msa0735620:intron 40.0%
GAACAGAAAATGGATGGATG+AGG - chr5_1:51084352-51084371 Msa0735620:intron 40.0%
ATATACACCGTTAAGGTGGA+TGG + chr5_1:51084441-51084460 None:intergenic 40.0%
AAATAGGCCCTCGATAGAAA+AGG + chr5_1:51084532-51084551 None:intergenic 40.0%
!! AACAGACTGGATTAGCAATG+TGG + chr5_1:51084664-51084683 None:intergenic 40.0%
CTAATGTGCTTAACAACTGC+AGG - chr5_1:51084882-51084901 Msa0735620:intron 40.0%
!!! AACAACTGCAGGTTGCTTTT+AGG - chr5_1:51084893-51084912 Msa0735620:intron 40.0%
CATTACTGTTGATGTTTGGG+TGG + chr5_1:51084930-51084949 None:intergenic 40.0%
CACCCAAACATCAACAGTAA+TGG - chr5_1:51084928-51084947 Msa0735620:intron 40.0%
CTGCCATTACTGTTGATGTT+TGG + chr5_1:51084934-51084953 None:intergenic 40.0%
CCTTGGAAATGGTTAAAGCT+GGG + chr5_1:51084990-51085009 None:intergenic 40.0%
ACCTTGGAAATGGTTAAAGC+TGG + chr5_1:51084991-51085010 None:intergenic 40.0%
!! TAGAGGGATTAGTTTCTCTG+GGG + chr5_1:51085223-51085242 None:intergenic 40.0%
! GTCAATTTGCTCGTTGTTGA+CGG - chr5_1:51085257-51085276 Msa0735620:intron 40.0%
TTCAGGAACAAGTGGATCAT+CGG + chr5_1:51085292-51085311 None:intergenic 40.0%
TGTGCAATTTCAGGAACAAG+TGG + chr5_1:51085300-51085319 None:intergenic 40.0%
TGTTTAGTGGAACTTGAAGC+TGG - chr5_1:51085488-51085507 Msa0735620:intron 40.0%
! AATCTTTGTGCTTGTTGACC+TGG - chr5_1:51085588-51085607 Msa0735620:five_prime_UTR 40.0%
ATTTCCTAGCTAGGAATACC+AGG + chr5_1:51085609-51085628 None:intergenic 40.0%
TGGTATTCCTAGCTAGGAAA+TGG - chr5_1:51085608-51085627 Msa0735620:five_prime_UTR 40.0%
TTGGATTGTGTTGTAGGTCT+TGG - chr5_1:51085639-51085658 Msa0735620:five_prime_UTR 40.0%
ACGAATCTTGAAGGAGCTCA+AGG - chr5_1:51080634-51080653 Msa0735620:three_prime_UTR 45.0%
AACCTGCACTGCATGAAGTT+GGG + chr5_1:51080676-51080695 None:intergenic 45.0%
AAACCTGCACTGCATGAAGT+TGG + chr5_1:51080677-51080696 None:intergenic 45.0%
CTCGGATCCAAGCATGTTAT+AGG + chr5_1:51080920-51080939 None:intergenic 45.0%
CTATAACATGCTTGGATCCG+AGG - chr5_1:51080918-51080937 Msa0735620:intron 45.0%
! CCGACCGCTATTTAAAACCT+CGG + chr5_1:51080938-51080957 None:intergenic 45.0%
!!! CCGAGGTTTTAAATAGCGGT+CGG - chr5_1:51080935-51080954 Msa0735620:intron 45.0%
!!! CGAGGTTTTAAATAGCGGTC+GGG - chr5_1:51080936-51080955 Msa0735620:intron 45.0%
CCGTCCCATAATACATGACA+CGG + chr5_1:51081295-51081314 None:intergenic 45.0%
CCGTGTCATGTATTATGGGA+CGG - chr5_1:51081292-51081311 Msa0735620:intron 45.0%
TGTCATGTATTATGGGACGG+AGG - chr5_1:51081295-51081314 Msa0735620:intron 45.0%
GTCATGTATTATGGGACGGA+GGG - chr5_1:51081296-51081315 Msa0735620:intron 45.0%
CAGCTGCAACAAAACGGTAT+AGG + chr5_1:51081449-51081468 None:intergenic 45.0%
TCTGCTTCCTTTGTGTGCAT+TGG - chr5_1:51081519-51081538 Msa0735620:intron 45.0%
TACATTATAGCGGCAGAGCT+TGG - chr5_1:51081564-51081583 Msa0735620:intron 45.0%
GTCCTTCGAGCTACAAAAGA+CGG - chr5_1:51081777-51081796 Msa0735620:intron 45.0%
ACGTTAATCCAACGGTGTAG+TGG + chr5_1:51081808-51081827 None:intergenic 45.0%
CTGATCTTGTATGAGACAGC+GGG + chr5_1:51081956-51081975 None:intergenic 45.0%
GCTGATCTTGTATGAGACAG+CGG + chr5_1:51081957-51081976 None:intergenic 45.0%
TCTCATACAAGATCAGCCAC+TGG - chr5_1:51081960-51081979 Msa0735620:intron 45.0%
CTCATACAAGATCAGCCACT+GGG - chr5_1:51081961-51081980 Msa0735620:intron 45.0%
GAATGAACAATCTCACCCAG+TGG + chr5_1:51081979-51081998 None:intergenic 45.0%
CAATTGTTTGTGGAGCTTGG+GGG - chr5_1:51082027-51082046 Msa0735620:intron 45.0%
! TCCATGCTTTTCCCTCTGAA+AGG - chr5_1:51082173-51082192 Msa0735620:intron 45.0%
GGAACACACCACCAGTATAT+GGG + chr5_1:51082434-51082453 None:intergenic 45.0%
AGGAACACACCACCAGTATA+TGG + chr5_1:51082435-51082454 None:intergenic 45.0%
! ATATACTGGTGGTGTGTTCC+TGG - chr5_1:51082434-51082453 Msa0735620:intron 45.0%
! GAATACCTTTGGTGGCTTGA+AGG + chr5_1:51082487-51082506 None:intergenic 45.0%
GAAGCAGGGTAGAATACCTT+TGG + chr5_1:51082498-51082517 None:intergenic 45.0%
CGAAAATGTCGGTACTACAG+AGG + chr5_1:51082776-51082795 None:intergenic 45.0%
ATTCTCGACCCTATGAAGCA+AGG + chr5_1:51082905-51082924 None:intergenic 45.0%
CTGCTCGAATTGTTTCCAGT+TGG - chr5_1:51082951-51082970 Msa0735620:intron 45.0%
TCGAATTGTTTCCAGTTGGC+TGG - chr5_1:51082955-51082974 Msa0735620:intron 45.0%
! TTGTTTCCAGTTGGCTGGTT+TGG - chr5_1:51082960-51082979 Msa0735620:intron 45.0%
GAGTGAAAACCCTTGACATC+GGG - chr5_1:51083013-51083032 Msa0735620:intron 45.0%
AAAACCACACCCGATGTCAA+GGG + chr5_1:51083025-51083044 None:intergenic 45.0%
! GAGGGGTAGAATACTTTTGG+TGG - chr5_1:51083105-51083124 Msa0735620:intron 45.0%
! GGTAGAATACTTTTGGTGGG+TGG - chr5_1:51083109-51083128 Msa0735620:intron 45.0%
!! AGAATACTTTTGGTGGGTGG+CGG - chr5_1:51083112-51083131 Msa0735620:intron 45.0%
GTAAATTTGAAGGGGCCAGA+AGG - chr5_1:51083136-51083155 Msa0735620:intron 45.0%
CCCAAAGCATACACATCAGA+AGG + chr5_1:51083336-51083355 None:intergenic 45.0%
!!! TATGCTTTGGGGGTTTTCTG+TGG - chr5_1:51083345-51083364 Msa0735620:intron 45.0%
!!! ATGCTTTGGGGGTTTTCTGT+GGG - chr5_1:51083346-51083365 Msa0735620:intron 45.0%
AAGAAACCACATAGGGATGG+GGG + chr5_1:51083377-51083396 None:intergenic 45.0%
CTCCGCATCATGAAATACAG+AGG + chr5_1:51083432-51083451 None:intergenic 45.0%
CTCTGTATTTCATGATGCGG+AGG - chr5_1:51083430-51083449 Msa0735620:intron 45.0%
TTATGGGAGAAGACCCATCA+AGG - chr5_1:51083532-51083551 Msa0735620:intron 45.0%
! TCTGTGGTTGATGCCTTGAT+GGG + chr5_1:51083548-51083567 None:intergenic 45.0%
! ATCTGTGGTTGATGCCTTGA+TGG + chr5_1:51083549-51083568 None:intergenic 45.0%
CACTTAGCCATCCACCTTAA+CGG - chr5_1:51084431-51084450 Msa0735620:intron 45.0%
!! CATGGTGGACTGTAAAAGAG+AGG + chr5_1:51084618-51084637 None:intergenic 45.0%
! TCGACATTCTGAAGGAACAG+TGG - chr5_1:51084962-51084981 Msa0735620:intron 45.0%
! CCCAGCTTTAACCATTTCCA+AGG - chr5_1:51084987-51085006 Msa0735620:intron 45.0%
!! AGAGGGATTAGTTTCTCTGG+GGG + chr5_1:51085222-51085241 None:intergenic 45.0%
TCAGGAACAAGTGGATCATC+GGG + chr5_1:51085291-51085310 None:intergenic 45.0%
ACACATGTACAAGACCGACA+GGG - chr5_1:51085317-51085336 Msa0735620:intron 45.0%
! TGGACACAGAAGTATGCCAT+GGG - chr5_1:51085366-51085385 Msa0735620:CDS 45.0%
GGACAAACATGATCATCCCA+TGG + chr5_1:51085385-51085404 None:intergenic 45.0%
GCTGCTCTTATTGAACAGCT+AGG + chr5_1:51085406-51085425 None:intergenic 45.0%
AGTGGAACTTGAAGCTGGTA+AGG - chr5_1:51085493-51085512 Msa0735620:intron 45.0%
GTGGAACTTGAAGCTGGTAA+GGG - chr5_1:51085494-51085513 Msa0735620:intron 45.0%
TTGACCTGGTATTCCTAGCT+AGG - chr5_1:51085602-51085621 Msa0735620:five_prime_UTR 45.0%
!!! ACAAATTTTTAATAAAAAAA+GGG + chr5_1:51080722-51080741 None:intergenic 5.0%
!!! AACAAATTTTTAATAAAAAA+AGG + chr5_1:51080723-51080742 None:intergenic 5.0%
!! ATATATAATCTTAAAATATT+TGG + chr5_1:51081609-51081628 None:intergenic 5.0%
GATTTGGAGAAGGGTGAAGG+AGG + chr5_1:51080427-51080446 None:intergenic 50.0%
! GGCGTCGAAACGAATCTTGA+AGG - chr5_1:51080625-51080644 Msa0735620:three_prime_UTR 50.0%
GGAGCTCAAGGATTTGCAGA+AGG - chr5_1:51080646-51080665 Msa0735620:exon 50.0%
ACCTGCACTGCATGAAGTTG+GGG + chr5_1:51080675-51080694 None:intergenic 50.0%
ATTATAGCGGCAGAGCTTGG+TGG - chr5_1:51081567-51081586 Msa0735620:intron 50.0%
! GACCGTCTTTTGTAGCTCGA+AGG + chr5_1:51081782-51081801 None:intergenic 50.0%
GCCTTTCAGAGGGAAAAGCA+TGG + chr5_1:51082177-51082196 None:intergenic 50.0%
GAAGAGAGGAGCCTTTCAGA+GGG + chr5_1:51082187-51082206 None:intergenic 50.0%
AGAAGAGAGGAGCCTTTCAG+AGG + chr5_1:51082188-51082207 None:intergenic 50.0%
TATATCAGGTCCTGTGGCTG+AGG - chr5_1:51082365-51082384 Msa0735620:intron 50.0%
CACTGGCAAGCCACAATCAT+GGG - chr5_1:51082396-51082415 Msa0735620:intron 50.0%
! CCAGTATATGGGCTATCAGC+CGG + chr5_1:51082423-51082442 None:intergenic 50.0%
GCTGATAGCCCATATACTGG+TGG - chr5_1:51082423-51082442 Msa0735620:intron 50.0%
CTATCCCTTCAAGCCACCAA+AGG - chr5_1:51082479-51082498 Msa0735620:intron 50.0%
GCAGGGTAGAATACCTTTGG+TGG + chr5_1:51082495-51082514 None:intergenic 50.0%
CCACGACCGCTTAAGAATGA+AGG + chr5_1:51082740-51082759 None:intergenic 50.0%
CCTTCATTCTTAAGCGGTCG+TGG - chr5_1:51082737-51082756 Msa0735620:intron 50.0%
AAAACCCTTGACATCGGGTG+TGG - chr5_1:51083018-51083037 Msa0735620:intron 50.0%
GAAAACCACACCCGATGTCA+AGG + chr5_1:51083026-51083045 None:intergenic 50.0%
! GGTGGCGGCGTAAATTTGAA+GGG - chr5_1:51083127-51083146 Msa0735620:intron 50.0%
GTGGCGGCGTAAATTTGAAG+GGG - chr5_1:51083128-51083147 Msa0735620:intron 50.0%
AACTGCCCCAAAATGCTCCT+AGG + chr5_1:51083291-51083310 None:intergenic 50.0%
!!! TGCTTTGGGGGTTTTCTGTG+GGG - chr5_1:51083347-51083366 Msa0735620:intron 50.0%
AGAAACCACATAGGGATGGG+GGG + chr5_1:51083376-51083395 None:intergenic 50.0%
CGTTAAGGTGGATGGCTAAG+TGG + chr5_1:51084433-51084452 None:intergenic 50.0%
TTGCAAGGTAGCTAGCGAGA+GGG + chr5_1:51084469-51084488 None:intergenic 50.0%
ATTGCAAGGTAGCTAGCGAG+AGG + chr5_1:51084470-51084489 None:intergenic 50.0%
CAGTCCACCATGTTCTTGCA+TGG - chr5_1:51084626-51084645 Msa0735620:intron 50.0%
AGGTCCATGCAAGAACATGG+TGG + chr5_1:51084633-51084652 None:intergenic 50.0%
CACAGGTCCATGCAAGAACA+TGG + chr5_1:51084636-51084655 None:intergenic 50.0%
TTAGCAATGTGGCTGAGCAC+AGG + chr5_1:51084653-51084672 None:intergenic 50.0%
AGCAGCACCCAACTTACAGT+AGG - chr5_1:51084756-51084775 Msa0735620:intron 50.0%
!!! GCAGGTTGCTTTTAGGACCA+AGG - chr5_1:51084900-51084919 Msa0735620:intron 50.0%
GATGTTTGGGTGGAACACCT+TGG + chr5_1:51084920-51084939 None:intergenic 50.0%
!! GAGGGATTAGTTTCTCTGGG+GGG + chr5_1:51085221-51085240 None:intergenic 50.0%
ACAAGTGGATCATCGGGGTT+GGG + chr5_1:51085285-51085304 None:intergenic 50.0%
AACAAGTGGATCATCGGGGT+TGG + chr5_1:51085286-51085305 None:intergenic 50.0%
CAGGAACAAGTGGATCATCG+GGG + chr5_1:51085290-51085309 None:intergenic 50.0%
CACACATGTACAAGACCGAC+AGG - chr5_1:51085316-51085335 Msa0735620:intron 50.0%
! CTGGACACAGAAGTATGCCA+TGG - chr5_1:51085365-51085384 Msa0735620:CDS 50.0%
CTGCACTGCATGAAGTTGGG+GGG + chr5_1:51080673-51080692 None:intergenic 55.0%
CCTGCACTGCATGAAGTTGG+GGG + chr5_1:51080674-51080693 None:intergenic 55.0%
TATGAGACAGCGGGAAGCCA+TGG + chr5_1:51081947-51081966 None:intergenic 55.0%
TGGAACATGTCCTCAGCCAC+AGG + chr5_1:51082378-51082397 None:intergenic 55.0%
TGGCTGAGGACATGTTCCAC+TGG - chr5_1:51082379-51082398 Msa0735620:intron 55.0%
! CCATGATTGTGGCTTGCCAG+TGG + chr5_1:51082398-51082417 None:intergenic 55.0%
CCACTGGCAAGCCACAATCA+TGG - chr5_1:51082395-51082414 Msa0735620:intron 55.0%
GCAAGCCACAATCATGGGAC+CGG - chr5_1:51082401-51082420 Msa0735620:intron 55.0%
ATCAGCCGGTCCCATGATTG+TGG + chr5_1:51082409-51082428 None:intergenic 55.0%
CCGGCTGATAGCCCATATAC+TGG - chr5_1:51082420-51082439 Msa0735620:intron 55.0%
GGCTTGAAGGGATAGTCAGG+AGG + chr5_1:51082474-51082493 None:intergenic 55.0%
GGTGGCTTGAAGGGATAGTC+AGG + chr5_1:51082477-51082496 None:intergenic 55.0%
CAGGATCCAAACCAGCCAAC+TGG + chr5_1:51082969-51082988 None:intergenic 55.0%
! GGGTGGCGGCGTAAATTTGA+AGG - chr5_1:51083126-51083145 Msa0735620:intron 55.0%
!!! GGAGCATTTTGGGGCAGTTG+TGG - chr5_1:51083292-51083311 Msa0735620:intron 55.0%
!!! GCATTTTGGGGCAGTTGTGG+TGG - chr5_1:51083295-51083314 Msa0735620:intron 55.0%
CTTATTGGGTGAGACCCACG+TGG - chr5_1:51083736-51083755 Msa0735620:intron 55.0%
TGCAAGGTAGCTAGCGAGAG+GGG + chr5_1:51084468-51084487 None:intergenic 55.0%
CAAGTGGATCATCGGGGTTG+GGG + chr5_1:51085284-51085303 None:intergenic 55.0%
GGCTTCATACTTGGCCCTGT+CGG + chr5_1:51085334-51085353 None:intergenic 55.0%
GCGAGCTGTGGCTTCATACT+TGG + chr5_1:51085343-51085362 None:intergenic 55.0%
TTCTTCCACGCTTCCGACCC+AGG - chr5_1:51080455-51080474 Msa0735620:three_prime_UTR 60.0%
ACAAACCTGGGTCGGAAGCG+TGG + chr5_1:51080463-51080482 None:intergenic 60.0%
CCCCCAACTTCATGCAGTGC+AGG - chr5_1:51080671-51080690 Msa0735620:CDS 60.0%
GACACAAGTTCGACTCCCCC+GGG + chr5_1:51081760-51081779 None:intergenic 60.0%
GGACACAAGTTCGACTCCCC+CGG + chr5_1:51081761-51081780 None:intergenic 60.0%
CGGTCTTGCCACTACACCGT+TGG - chr5_1:51081797-51081816 Msa0735620:intron 60.0%
GGTTTCCCCCCATCCCTATG+TGG - chr5_1:51083368-51083387 Msa0735620:intron 60.0%
ATGAAGCCACAGCTCGCAGC+TGG - chr5_1:51085346-51085365 Msa0735620:intron 60.0%
CTGTGTCCAGCTGCGAGCTG+TGG + chr5_1:51085355-51085374 None:intergenic 65.0%
Chromosome Type Strat End Strand Name
chr5_1 gene 51080298 51085754 51080298 ID=Msa0735620;Name=Msa0735620
chr5_1 mRNA 51080298 51085754 51080298 ID=Msa0735620-mRNA-1;Parent=Msa0735620;Name=Msa0735620-mRNA-1;_AED=0.10;_eAED=0.10;_QI=190|1|1|1|0.75|0.6|5|362|148
chr5_1 exon 51080298 51080803 51080298 ID=Msa0735620-mRNA-1:exon:14397;Parent=Msa0735620-mRNA-1
chr5_1 exon 51081044 51081148 51081044 ID=Msa0735620-mRNA-1:exon:14396;Parent=Msa0735620-mRNA-1
chr5_1 exon 51083552 51083679 51083552 ID=Msa0735620-mRNA-1:exon:14395;Parent=Msa0735620-mRNA-1
chr5_1 exon 51085360 51085440 51085360 ID=Msa0735620-mRNA-1:exon:14394;Parent=Msa0735620-mRNA-1
chr5_1 exon 51085576 51085754 51085576 ID=Msa0735620-mRNA-1:exon:14393;Parent=Msa0735620-mRNA-1
chr5_1 five_prime_UTR 51085576 51085754 51085576 ID=Msa0735620-mRNA-1:five_prime_utr;Parent=Msa0735620-mRNA-1
chr5_1 five_prime_UTR 51085430 51085440 51085430 ID=Msa0735620-mRNA-1:five_prime_utr;Parent=Msa0735620-mRNA-1
chr5_1 CDS 51085360 51085429 51085360 ID=Msa0735620-mRNA-1:cds;Parent=Msa0735620-mRNA-1
chr5_1 CDS 51083552 51083679 51083552 ID=Msa0735620-mRNA-1:cds;Parent=Msa0735620-mRNA-1
chr5_1 CDS 51081044 51081148 51081044 ID=Msa0735620-mRNA-1:cds;Parent=Msa0735620-mRNA-1
chr5_1 CDS 51080660 51080803 51080660 ID=Msa0735620-mRNA-1:cds;Parent=Msa0735620-mRNA-1
chr5_1 three_prime_UTR 51080298 51080659 51080298 ID=Msa0735620-mRNA-1:three_prime_utr;Parent=Msa0735620-mRNA-1
Gene Sequence

>Msa0735620

ATGGCGTCGAAACGAATCTTGAAGGAGCTCAAGGATTTGCAGAAGGACCCCCCAACTTCATGCAGTGCAGGTCCTGTGGCTGAGGACATGTTCCACTGGCAAGCCACAATCATGGGACCGGCTGATAGCCCATATACTGGTGGTGTGTTCCTGGTTTCAATTCATTTTCCTCCTGACTATCCCTTCAAGCCACCAAAGGTTGCTTTTAGGACCAAGGTGTTCCACCCAAACATCAACAGTAATGGCAGTATATGTCTCGACATTCTGAAGGAACAGTGGAGCCCAGCTTTAACCATTTCCAAGGTCCTTTTGTCAATTTGCTCGTTGTTGACGGACCCCAACCCCGATGATCCACTTGTTCCTGAAATTGCACACATGTACAAGACCGACAGGGCCAAGTATGAAGCCACAGCTCGCAGCTGGACACAGAAGTATGCCATGGGATGA
Protein sequence

>Msa0735620

MASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPADSPYTGGVFLVSIHFPPDYPFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMYKTDRAKYEATARSWTQKYAMG*