AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0692060


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0692060 MtrunA17_Chr4g0042061 97.862 795 15 1 1 795 1 793 0.0 1592
Msa0692060 MtrunA17_Chr2g0319271 80.840 762 143 3 36 795 1 761 0.0 1271
Msa0692060 MtrunA17_Chr2g0280421 56.366 809 315 8 1 794 1 786 0.0 853
Msa0692060 MtrunA17_Chr4g0049011 58.520 581 208 7 217 784 72 632 0.0 639
Msa0692060 MtrunA17_Chr1g0191851 45.855 386 184 7 406 784 114 481 6.49e-96 316
Msa0692060 MtrunA17_Chr2g0312631 45.333 375 190 5 408 782 358 717 3.80e-94 317
Msa0692060 MtrunA17_Chr7g0272871 45.407 381 183 8 411 784 99 461 1.73e-92 305
Msa0692060 MtrunA17_Chr5g0411971 39.440 464 242 7 342 784 286 731 8.39e-91 308
Msa0692060 MtrunA17_Chr7g0271961 41.425 449 208 11 352 780 316 729 1.20e-89 304
Msa0692060 MtrunA17_Chr5g0421591 39.009 464 244 7 342 784 261 706 6.52e-89 300
Msa0692060 MtrunA17_Chr5g0421521 43.636 385 199 5 400 784 340 706 7.74e-89 301
Msa0692060 MtrunA17_Chr1g0195111 45.405 370 177 9 422 785 384 734 1.22e-87 298
Msa0692060 MtrunA17_Chr1g0192481 42.935 368 180 7 422 780 46 392 1.20e-83 278
Msa0692060 MtrunA17_Chr5g0447041 35.091 550 256 17 310 780 282 809 4.66e-80 279
Msa0692060 MtrunA17_Chr3g0102921 38.695 429 233 10 365 778 369 782 7.41e-80 278
Msa0692060 MtrunA17_Chr8g0369881 34.074 540 288 15 252 786 731 1207 2.84e-76 269
Msa0692060 MtrunA17_Chr5g0407791 36.287 474 242 10 341 773 755 1209 8.25e-76 268
Msa0692060 MtrunA17_Chr1g0191181 39.494 395 221 7 382 775 37 414 1.17e-75 258
Msa0692060 MtrunA17_Chr7g0257301 35.897 468 239 12 340 780 316 749 6.89e-74 261
Msa0692060 MtrunA17_Chr4g0045381 40.669 359 174 12 431 771 190 527 5.73e-62 228
Msa0692060 MtrunA17_Chr4g0069141 39.011 364 185 11 425 771 144 487 6.77e-57 212
Msa0692060 MtrunA17_Chr2g0327581 37.709 358 204 8 425 771 39 388 7.88e-57 211
Msa0692060 MtrunA17_Chr1g0182151 38.793 348 196 8 434 771 54 394 1.86e-56 209
Msa0692060 MtrunA17_Chr7g0266631 37.535 357 192 10 434 771 9 353 4.46e-56 208
Msa0692060 MtrunA17_Chr2g0322291 39.722 360 170 10 434 771 88 422 4.52e-56 209
Msa0692060 MtrunA17_Chr1g0178411 37.921 356 192 10 434 771 13 357 1.19e-55 207
Msa0692060 MtrunA17_Chr3g0122121 37.190 363 178 12 435 773 99 435 1.29e-54 204
Msa0692060 MtrunA17_Chr8g0377731 36.745 381 183 12 420 773 40 389 2.01e-53 201
Msa0692060 MtrunA17_Chr8g0367581 36.364 363 205 5 421 783 133 469 3.21e-53 200
Msa0692060 MtrunA17_Chr1g0193221 36.286 350 180 9 435 771 4 323 1.21e-52 199
Msa0692060 MtrunA17_Chr3g0132921 37.624 303 176 7 479 771 46 345 3.92e-51 187
Msa0692060 MtrunA17_Chr5g0427481 35.447 347 204 8 435 771 18 354 5.51e-50 190
Msa0692060 MtrunA17_Chr4g0053211 35.792 366 198 12 434 771 12 368 7.44e-50 189
Msa0692060 MtrunA17_Chr3g0134191 37.466 363 190 11 435 771 9 360 1.14e-49 189
Msa0692060 MtrunA17_Chr1g0153061 36.288 361 197 11 435 771 9 360 8.61e-49 186
Msa0692060 MtrunA17_Chr1g0152231 35.457 361 175 9 435 771 4 330 4.80e-48 183
Msa0692060 MtrunA17_Chr7g0269681 50.000 172 86 0 614 785 33 204 3.14e-47 175
Msa0692060 MtrunA17_Chr8g0386891 51.515 165 80 0 622 786 4 168 5.27e-47 172
Msa0692060 MtrunA17_Chr2g0307481 35.838 346 192 9 435 771 69 393 1.40e-46 176
Msa0692060 MtrunA17_Chr4g0062291 37.500 296 160 7 481 771 176 451 3.14e-44 170
Msa0692060 MtrunA17_Chr6g0484501 50.867 173 85 0 614 786 26 198 7.98e-44 158
Msa0692060 MtrunA17_Chr5g0398521 32.791 369 203 11 431 775 54 401 1.50e-43 170
Msa0692060 MtrunA17_Chr4g0035661 37.134 307 168 8 480 782 129 414 2.64e-42 166
Msa0692060 MtrunA17_Chr7g0245931 33.424 368 201 11 431 775 49 395 6.51e-42 164
Msa0692060 MtrunA17_Chr3g0101021 35.783 313 164 7 481 771 108 405 4.98e-41 162
Msa0692060 MtrunA17_Chr3g0145071 37.049 305 167 8 480 780 139 422 6.85e-41 162
Msa0692060 MtrunA17_Chr6g0483701 35.216 301 165 6 477 771 73 349 1.14e-40 161
Msa0692060 MtrunA17_Chr5g0445211 33.784 370 190 10 427 771 67 406 2.66e-40 160
Msa0692060 MtrunA17_Chr8g0390991 52.830 159 75 0 622 780 4 162 7.59e-40 155
Msa0692060 MtrunA17_Chr6g0485471 34.270 356 201 8 435 782 116 446 8.80e-40 156
Msa0692060 MtrunA17_Chr4g0036001 33.242 364 206 9 415 768 4 340 2.43e-39 157
Msa0692060 MtrunA17_Chr7g0238581 33.815 346 195 11 435 770 26 347 2.75e-39 154
Msa0692060 MtrunA17_Chr2g0295881 34.316 373 190 14 435 781 198 541 1.51e-38 154
Msa0692060 MtrunA17_Chr7g0258991 33.711 353 197 10 432 776 71 394 1.70e-38 154
Msa0692060 MtrunA17_Chr4g0070001 33.152 368 205 11 419 776 125 461 3.98e-38 153
Msa0692060 MtrunA17_Chr2g0331761 34.473 351 197 10 435 777 186 511 4.78e-38 151
Msa0692060 MtrunA17_Chr5g0405181 35.216 301 155 8 480 769 68 339 6.52e-38 152
Msa0692060 MtrunA17_Chr8g0372171 34.884 301 156 8 480 769 67 338 9.82e-38 152
Msa0692060 MtrunA17_Chr3g0142261 32.471 348 192 9 435 769 20 337 4.58e-37 150
Msa0692060 MtrunA17_Chr4g0067421 31.707 369 203 8 435 781 206 547 2.33e-36 147
Msa0692060 MtrunA17_Chr8g0386901 35.608 337 178 12 259 584 324 632 2.19e-35 143
Msa0692060 MtrunA17_Chr6g0484511 44.134 179 88 6 412 586 269 439 1.33e-33 135
Msa0692060 MtrunA17_Chr8g0390981 47.929 169 78 5 422 586 503 665 1.89e-33 137
Msa0692060 MtrunA17_Chr7g0269691 44.910 167 81 6 422 584 388 547 2.84e-33 135
Msa0692060 MtrunA17_Chr1g0187411 30.028 363 195 13 460 788 147 484 2.68e-30 128
Msa0692060 MtrunA17_Chr3g0142841 27.622 286 155 9 483 749 145 397 1.58e-17 87.8
Msa0692060 MtrunA17_Chr6g0470541 26.263 297 189 8 481 775 51 319 6.69e-17 85.5
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0692060 AT5G54670.1 64.032 759 252 4 42 793 8 752 0.0 991
Msa0692060 AT5G54670.2 64.032 759 252 4 42 793 8 752 0.0 991
Msa0692060 AT4G27180.1 63.026 760 249 5 42 793 8 743 0.0 960
Msa0692060 AT4G27180.2 63.026 760 249 5 42 793 8 743 0.0 960
Msa0692060 AT4G21270.1 60.891 808 286 9 1 794 1 792 0.0 938
Msa0692060 AT4G05190.1 59.752 805 297 7 1 794 1 789 0.0 919
Msa0692060 AT4G05190.2 61.589 768 274 6 38 794 19 776 0.0 916
Msa0692060 AT5G54670.3 64.103 702 231 4 99 793 5 692 0.0 915
Msa0692060 AT1G72250.3 45.647 425 205 9 360 782 446 846 5.77e-98 330
Msa0692060 AT1G72250.4 45.647 425 205 9 360 782 445 845 5.93e-98 330
Msa0692060 AT1G72250.2 45.647 425 205 9 360 782 434 834 6.49e-98 330
Msa0692060 AT1G72250.1 44.762 420 203 8 376 782 422 825 1.19e-97 329
Msa0692060 AT5G27550.2 43.026 423 219 6 363 784 65 466 1.80e-94 312
Msa0692060 AT5G27550.1 43.026 423 219 6 363 784 65 466 1.80e-94 312
Msa0692060 AT2G22610.2 45.078 386 192 5 400 784 383 749 3.53e-93 315
Msa0692060 AT2G22610.3 45.078 386 192 5 400 784 384 750 3.73e-93 315
Msa0692060 AT2G22610.1 45.078 386 192 5 400 784 383 749 4.41e-93 315
Msa0692060 AT1G63640.3 38.550 524 247 15 311 786 316 812 4.17e-91 309
Msa0692060 AT1G63640.1 38.550 524 247 15 311 786 316 812 4.74e-91 309
Msa0692060 AT1G63640.4 38.550 524 247 15 311 786 316 812 4.74e-91 309
Msa0692060 AT1G63640.5 38.550 524 247 15 311 786 306 802 4.76e-91 309
Msa0692060 AT1G09170.4 45.304 362 178 7 422 780 422 766 5.29e-90 302
Msa0692060 AT1G09170.3 45.304 362 178 7 422 780 422 766 9.66e-90 300
Msa0692060 AT1G09170.7 45.304 362 178 7 422 780 422 766 9.66e-90 300
Msa0692060 AT1G09170.2 45.304 362 178 7 422 780 422 766 1.88e-89 301
Msa0692060 AT1G73860.2 46.361 371 176 9 422 786 414 767 2.10e-89 302
Msa0692060 AT1G63640.2 37.977 524 243 15 311 786 316 805 8.32e-89 303
Msa0692060 AT1G09170.5 45.304 362 178 7 422 780 422 766 1.22e-88 302
Msa0692060 AT1G73860.1 39.504 524 262 15 289 786 356 850 4.41e-88 300
Msa0692060 AT2G47500.2 45.879 364 172 7 422 780 387 730 9.77e-88 298
Msa0692060 AT2G47500.1 45.879 364 172 7 422 780 387 730 2.37e-87 297
Msa0692060 AT5G41310.1 44.504 373 161 6 422 786 410 744 7.81e-87 296
Msa0692060 AT5G27000.1 44.444 360 185 4 422 780 382 727 6.94e-85 291
Msa0692060 AT1G18410.3 44.892 372 179 7 422 786 477 829 1.16e-84 290
Msa0692060 AT1G18410.2 44.892 372 179 7 422 786 477 829 1.16e-84 290
Msa0692060 AT1G18410.5 41.304 460 215 10 350 786 384 811 1.69e-84 290
Msa0692060 AT3G44730.1 39.958 473 211 17 329 780 291 711 3.42e-84 290
Msa0692060 AT3G44730.4 39.958 473 211 17 329 780 291 711 3.42e-84 290
Msa0692060 AT3G44730.2 40.127 471 213 16 329 780 336 756 4.37e-84 291
Msa0692060 AT3G44730.3 40.127 471 213 16 329 780 336 756 4.37e-84 291
Msa0692060 AT1G18410.4 44.892 372 179 7 422 786 620 972 2.28e-83 289
Msa0692060 AT1G18410.1 41.304 460 215 10 350 786 537 964 3.63e-83 288
Msa0692060 AT3G10310.1 43.817 372 186 11 412 780 344 695 5.75e-81 280
Msa0692060 AT3G10310.2 43.817 372 186 11 412 780 344 695 6.34e-81 280
Msa0692060 AT5G27950.1 40.299 402 214 8 379 775 25 405 7.07e-76 258
Msa0692060 AT1G09170.6 45.031 322 157 7 422 740 422 726 5.94e-75 259
Msa0692060 AT1G09170.8 45.031 322 157 7 422 740 422 726 5.94e-75 259
Msa0692060 AT5G65930.2 32.201 677 366 19 103 771 615 1206 6.92e-75 265
Msa0692060 AT5G65930.1 32.201 677 366 19 103 771 614 1205 8.26e-75 265
Msa0692060 AT5G65930.3 32.201 677 366 19 103 771 621 1212 1.18e-74 265
Msa0692060 AT1G09170.1 40.608 362 159 6 422 780 422 730 7.65e-74 260
Msa0692060 AT1G55550.1 39.167 360 197 7 419 777 76 414 2.64e-72 254
Msa0692060 AT3G19050.1 41.408 355 171 12 434 771 193 527 2.17e-63 232
Msa0692060 AT3G17360.2 38.983 354 181 10 434 771 168 502 1.33e-58 218
Msa0692060 AT3G17360.3 38.983 354 181 10 434 771 168 502 1.34e-58 218
Msa0692060 AT3G17360.1 38.983 354 181 10 434 771 168 502 1.51e-58 218
Msa0692060 AT2G36200.1 38.333 360 185 9 434 771 12 356 3.21e-58 215
Msa0692060 AT2G36200.2 38.333 360 185 9 434 771 12 356 5.57e-58 214
Msa0692060 AT3G45850.2 37.746 355 189 10 434 771 55 394 4.66e-57 212
Msa0692060 AT3G45850.1 37.746 355 189 10 434 771 55 394 4.66e-57 212
Msa0692060 AT3G44050.1 40.113 354 177 10 434 771 93 427 1.76e-56 211
Msa0692060 AT2G37420.1 37.892 351 194 10 434 771 48 387 4.77e-56 209
Msa0692060 AT2G37420.2 37.892 351 194 10 434 771 48 387 4.77e-56 209
Msa0692060 AT2G28620.3 36.620 355 193 9 434 771 50 389 1.15e-55 207
Msa0692060 AT2G28620.2 36.620 355 193 9 434 771 50 389 1.15e-55 207
Msa0692060 AT2G28620.1 37.571 354 191 11 434 771 50 389 1.23e-55 207
Msa0692060 AT5G65460.2 35.613 351 200 5 421 771 125 449 3.40e-54 203
Msa0692060 AT5G65460.6 35.613 351 200 5 421 771 125 449 3.64e-54 203
Msa0692060 AT5G65460.4 35.613 351 200 5 421 771 125 449 5.66e-54 203
Msa0692060 AT5G65460.1 35.613 351 200 5 421 771 125 449 5.70e-54 203
Msa0692060 AT5G65460.3 35.211 355 203 5 421 771 125 456 1.45e-53 202
Msa0692060 AT4G14150.1 36.011 361 182 10 435 773 92 425 5.84e-53 200
Msa0692060 AT3G50240.2 37.637 364 188 10 435 771 26 377 7.45e-53 199
Msa0692060 AT3G23670.2 38.438 320 156 8 478 773 128 430 1.66e-52 197
Msa0692060 AT3G50240.1 37.637 364 188 10 435 771 26 377 1.88e-52 198
Msa0692060 AT3G50240.4 37.637 364 188 10 435 771 26 377 1.96e-52 198
Msa0692060 AT3G23670.1 38.438 320 156 8 478 773 128 430 2.48e-52 198
Msa0692060 AT5G10470.1 35.694 353 197 7 421 771 129 453 4.44e-52 197
Msa0692060 AT5G10470.2 35.694 353 197 7 421 771 129 453 4.61e-52 197
Msa0692060 AT3G10180.2 35.429 350 184 7 435 771 4 324 1.16e-51 196
Msa0692060 AT3G10180.1 35.429 350 184 7 435 771 4 324 1.19e-51 196
Msa0692060 AT5G47820.2 36.785 367 193 13 434 771 11 367 1.14e-50 192
Msa0692060 AT5G47820.1 36.785 367 193 13 434 771 11 367 1.14e-50 192
Msa0692060 AT3G63480.1 36.915 363 191 16 434 780 3 343 1.61e-48 179
Msa0692060 AT3G63480.2 36.639 363 188 15 434 780 3 339 1.75e-48 179
Msa0692060 AT1G59540.1 36.443 343 186 10 435 770 4 321 4.42e-48 183
Msa0692060 AT5G60930.1 36.164 318 175 9 479 771 43 357 3.56e-46 179
Msa0692060 AT5G60930.3 36.164 318 175 9 479 771 43 357 3.91e-46 179
Msa0692060 AT5G60930.2 36.164 318 175 9 479 771 43 357 5.28e-46 179
Msa0692060 AT1G18550.1 36.949 295 162 7 481 771 204 478 1.12e-44 172
Msa0692060 AT1G12430.2 32.249 369 196 12 435 775 71 413 2.60e-43 169
Msa0692060 AT1G12430.1 32.249 369 196 12 435 775 71 413 2.71e-43 169
Msa0692060 AT3G54870.2 34.603 315 168 9 475 771 144 438 5.97e-43 169
Msa0692060 AT3G54870.3 34.603 315 168 9 475 771 144 438 6.33e-43 168
Msa0692060 AT3G54870.1 34.603 315 168 9 475 771 144 438 6.58e-43 168
Msa0692060 AT3G50240.3 39.350 277 139 6 520 771 3 275 1.02e-42 168
Msa0692060 AT2G21380.2 38.436 307 160 9 480 780 144 427 1.24e-42 168
Msa0692060 AT2G21380.1 38.436 307 160 9 480 780 144 427 1.24e-42 168
Msa0692060 AT1G01950.2 32.703 370 201 12 431 775 57 403 3.47e-42 166
Msa0692060 AT4G39050.1 34.771 371 207 11 418 782 82 423 3.56e-42 166
Msa0692060 AT1G01950.1 32.703 370 201 12 431 775 57 403 3.67e-42 166
Msa0692060 AT5G06670.2 34.746 354 198 10 429 776 61 387 3.76e-42 166
Msa0692060 AT5G06670.3 34.746 354 198 10 429 776 61 387 3.76e-42 166
Msa0692060 AT1G01950.3 32.703 370 201 12 431 775 57 403 4.16e-42 166
Msa0692060 AT5G06670.8 34.746 354 198 10 429 776 61 387 6.06e-42 164
Msa0692060 AT5G06670.4 34.746 354 198 10 429 776 61 387 6.06e-42 164
Msa0692060 AT5G06670.7 34.746 354 198 10 429 776 61 387 6.06e-42 164
Msa0692060 AT5G06670.5 34.746 354 198 10 429 776 61 387 6.56e-42 164
Msa0692060 AT3G49650.1 36.306 314 175 7 470 778 54 347 2.75e-41 162
Msa0692060 AT5G27950.2 39.592 245 137 4 534 775 3 239 3.39e-41 157
Msa0692060 AT5G06670.6 34.160 363 197 11 429 776 61 396 8.77e-41 162
Msa0692060 AT5G06670.1 34.160 363 197 11 429 776 61 396 8.77e-41 162
Msa0692060 AT1G21730.1 34.734 357 200 11 430 780 71 400 1.62e-40 160
Msa0692060 AT1G18370.1 36.242 298 160 8 480 771 77 350 3.88e-40 160
Msa0692060 AT3G12020.4 33.333 351 201 9 432 776 67 390 1.97e-39 157
Msa0692060 AT3G12020.1 33.333 351 201 9 432 776 67 390 1.97e-39 157
Msa0692060 AT3G12020.3 33.333 351 201 9 432 776 67 390 3.62e-39 157
Msa0692060 AT3G12020.2 33.333 351 201 9 432 776 67 390 3.62e-39 157
Msa0692060 AT3G16060.1 33.903 351 199 7 435 777 170 495 6.64e-39 154
Msa0692060 AT3G43210.3 37.415 294 153 7 481 768 74 342 1.30e-38 155
Msa0692060 AT3G43210.5 37.415 294 153 7 481 768 74 342 1.30e-38 155
Msa0692060 AT3G43210.2 37.415 294 153 7 481 768 74 342 1.30e-38 155
Msa0692060 AT3G43210.4 37.415 294 153 7 481 768 74 342 1.30e-38 155
Msa0692060 AT3G43210.1 37.415 294 153 7 481 768 74 342 1.30e-38 155
Msa0692060 AT3G51150.1 35.880 301 153 8 480 769 65 336 3.10e-38 154
Msa0692060 AT3G51150.2 35.880 301 153 8 480 769 65 336 3.13e-38 154
Msa0692060 AT3G51150.4 35.880 301 153 8 480 769 65 336 3.13e-38 154
Msa0692060 AT3G51150.3 35.880 301 153 8 480 769 65 336 3.13e-38 154
Msa0692060 AT4G38950.3 34.122 296 163 6 480 768 59 329 6.67e-38 152
Msa0692060 AT4G38950.5 34.122 296 163 6 480 768 59 329 6.67e-38 152
Msa0692060 AT4G38950.4 34.122 296 163 6 480 768 59 329 6.67e-38 152
Msa0692060 AT4G38950.1 34.122 296 163 6 480 768 59 329 6.67e-38 152
Msa0692060 AT4G38950.2 34.122 296 163 6 480 768 59 329 6.67e-38 152
Msa0692060 AT4G24170.1 35.762 302 157 8 478 769 47 321 9.43e-37 149
Msa0692060 AT4G24170.2 35.762 302 157 8 478 769 47 321 9.43e-37 149
Msa0692060 AT5G66310.2 35.354 297 160 7 480 769 66 337 9.73e-37 149
Msa0692060 AT5G66310.3 35.354 297 160 7 480 769 66 337 9.73e-37 149
Msa0692060 AT5G66310.1 35.354 297 160 7 480 769 66 337 9.73e-37 149
Msa0692060 AT5G02370.1 31.534 352 191 12 434 770 20 336 2.07e-36 145
Msa0692060 AT3G20150.1 33.016 315 174 8 481 773 136 435 2.68e-36 148
Msa0692060 AT3G20150.2 33.016 315 174 8 481 773 136 435 2.96e-36 148
Msa0692060 AT3G16630.2 31.653 357 197 7 435 771 194 523 1.91e-35 144
Msa0692060 AT3G16630.1 31.653 357 197 7 435 771 194 523 1.91e-35 144
Msa0692060 AT1G59540.2 36.981 265 142 6 534 792 3 248 1.08e-34 142
Msa0692060 AT2G21300.2 33.557 298 162 8 480 768 70 340 1.22e-34 142
Msa0692060 AT2G21300.4 33.557 298 162 8 480 768 70 340 1.22e-34 142
Msa0692060 AT2G21300.3 33.557 298 162 8 480 768 70 340 1.22e-34 142
Msa0692060 AT2G21300.1 33.557 298 162 8 480 768 70 340 1.22e-34 142
Msa0692060 AT2G21300.5 33.557 298 162 8 480 768 70 340 1.22e-34 142
Msa0692060 AT4G14330.1 31.476 359 210 14 443 785 42 380 3.57e-33 137
Msa0692060 AT1G01950.4 34.276 283 142 9 516 775 1 262 9.79e-33 136
Msa0692060 AT5G42490.2 34.836 244 127 8 480 717 55 272 5.02e-24 109
Msa0692060 AT5G42490.1 34.836 244 127 8 480 717 55 272 5.39e-24 108
Msa0692060 AT5G65460.5 33.014 209 121 3 562 770 13 202 3.57e-23 106
Msa0692060 AT3G51150.5 41.975 162 77 4 618 769 29 183 1.11e-21 101
Msa0692060 AT5G23910.2 27.097 310 191 11 476 784 54 329 2.43e-16 84.0
Msa0692060 AT5G23910.1 27.097 310 191 11 476 784 50 325 2.73e-16 84.0
Msa0692060 AT1G20060.8 28.873 284 164 8 483 751 165 425 5.07e-14 76.6
Msa0692060 AT1G20060.4 28.873 284 164 8 483 751 165 425 5.11e-14 76.6
Msa0692060 AT1G20060.10 28.873 284 164 8 483 751 165 425 5.21e-14 76.6
Msa0692060 AT1G20060.6 28.873 284 164 8 483 751 165 425 5.30e-14 76.6
Msa0692060 AT1G20060.9 28.873 284 164 8 483 751 165 425 5.38e-14 76.6
Msa0692060 AT1G20060.5 28.873 284 164 8 483 751 165 425 5.43e-14 76.6
Msa0692060 AT1G20060.2 28.873 284 164 8 483 751 165 425 5.67e-14 76.6
Msa0692060 AT1G20060.7 28.873 284 164 8 483 751 165 425 5.81e-14 76.6
Msa0692060 AT1G20060.3 28.873 284 164 8 483 751 165 425 5.93e-14 76.6

Find 149 sgRNAs with CRISPR-Local

Find 273 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TCACAAGAGATATACCATTT+TGG 0.187916 4_4:+60386278 None:intergenic
AAAATTACACAATACCATTT+TGG 0.194447 4_4:-60386508 Msa0692060:intron
GAAAGAAAGGTTTAATTATA+AGG 0.248971 4_4:-60388821 Msa0692060:intron
ACAATCAAACATGACGTAAA+TGG 0.257325 4_4:-60385476 Msa0692060:CDS
CCTGGACATCCTGATGAAAA+AGG 0.267155 4_4:-60385789 Msa0692060:CDS
CCAGAAGTTTCCATTGATAA+TGG 0.291607 4_4:+60386319 None:intergenic
GTGTTCACTCTTCGAATATA+TGG 0.292968 4_4:-60385076 Msa0692060:CDS
TTAGGAAAGATGTGAAAATA+TGG 0.299763 4_4:-60388340 Msa0692060:intron
TGCCTTATTCTTCCATTAAT+CGG 0.302133 4_4:+60388979 None:intergenic
GGTTCAATGAATTACCAAAA+TGG 0.302426 4_4:+60386494 None:intergenic
CAAATTTAAAAGAATGCTTC+TGG 0.303819 4_4:+60386155 None:intergenic
ATATGGTGGATTATATAAAA+AGG 0.309229 4_4:-60388323 Msa0692060:CDS
AGTAATGCTGGATCGGATTA+TGG 0.312596 4_4:-60388901 Msa0692060:CDS
AGGAAGATCATGTGCCATTC+AGG 0.324338 4_4:-60384657 Msa0692060:CDS
AGAGTAAATGCTTGTGAGAT+TGG 0.335718 4_4:-60384385 Msa0692060:CDS
TGGCACATGATCTTCCTTCT+TGG 0.336040 4_4:+60384663 None:intergenic
CCATTATCAATGGAAACTTC+TGG 0.339393 4_4:-60386319 Msa0692060:CDS
AAGATCATCCTTCTGCTTTG+TGG 0.340847 4_4:+60387145 None:intergenic
TTGATTGTGTATTGCTTTCC+AGG 0.340915 4_4:+60385491 None:intergenic
TCAGAATATAAACTTATAGA+AGG 0.341562 4_4:-60386546 Msa0692060:CDS
TTTACAAGAGAAATTGATAA+AGG 0.345900 4_4:-60388008 Msa0692060:CDS
AAGTGCTCTTGATGGTTATA+AGG 0.346220 4_4:-60386068 Msa0692060:intron
GATGTATCACGCGTGGAAAA+TGG 0.352045 4_4:-60385518 Msa0692060:CDS
GGAGAACTCTTGCATTGAAT+TGG 0.352306 4_4:-60387006 Msa0692060:CDS
GCCTATGGTCAAACAGGATC+AGG 0.373014 4_4:-60385837 Msa0692060:CDS
ATCTTTGCCTATGGTCAAAC+AGG 0.382932 4_4:-60385843 Msa0692060:CDS
TCATGAAACTAAAAGAATCT+AGG 0.388183 4_4:-60387028 Msa0692060:CDS
CTCCGATTAATGGAAGAATA+AGG 0.389381 4_4:-60388981 Msa0692060:CDS
CTTGTACAAAGTGCTCTTGA+TGG 0.389788 4_4:-60386076 Msa0692060:CDS
ATGGTGGAGACTCCGATTAA+TGG 0.397749 4_4:-60388991 Msa0692060:CDS
AGGTCTTCCCATCATTGTAT+AGG 0.402460 4_4:+60385809 None:intergenic
TCAGAACACCTTGTACTTGT+TGG 0.402581 4_4:+60384909 None:intergenic
CATCTCACCTGATCCTTCTT+CGG 0.408718 4_4:-60384443 Msa0692060:CDS
GGAATTGACCTAGCCCAAAA+TGG 0.409411 4_4:-60386292 Msa0692060:intron
CTGAATCTAATTGACCTTGC+TGG 0.411776 4_4:-60384890 Msa0692060:CDS
TTGAAGCAGAATCTCTCAAC+TGG 0.418775 4_4:+60389252 None:intergenic
CGCGTGGAAAATGGTACTCC+TGG 0.426949 4_4:-60385509 Msa0692060:CDS
AGTAGCTCGTCTCCAGGTCT+TGG 0.431526 4_4:+60388277 None:intergenic
ATACCTGAGTTTCTCTCAAC+CGG 0.433179 4_4:+60384831 None:intergenic
TAGGTTTGCATCTTTGCCTA+TGG 0.434502 4_4:-60385852 Msa0692060:CDS
ATTGAAAGAGAATCAAATAA+AGG 0.441172 4_4:-60386856 Msa0692060:CDS
TTGAGAGATTCTGCTTCAAA+TGG 0.452190 4_4:-60389248 Msa0692060:exon
GATGTGTGTGTGAGTGATAA+TGG 0.455909 4_4:+60389202 None:intergenic
ATTCAGTTATCCATTATCAA+TGG 0.455935 4_4:-60386329 Msa0692060:CDS
GACATTAAAAGCAAGTGAAC+TGG 0.455991 4_4:-60386976 Msa0692060:CDS
AGCTGCAGAGAAGAAATTGC+AGG 0.462996 4_4:-60386814 Msa0692060:intron
ATGATTAAACAGCCTTGTCT+TGG 0.465469 4_4:-60384496 Msa0692060:intron
TTTGCGCTTGAGATAATTGA+CGG 0.466217 4_4:+60387066 None:intergenic
TATCAGATGGTTCCAAGACC+TGG 0.467725 4_4:-60388289 Msa0692060:CDS
CTTTCAAAGAGTGGTTCAAC+CGG 0.471546 4_4:-60384857 Msa0692060:CDS
AGAGATGCTGCTTAAAATCA+AGG 0.476914 4_4:-60388080 Msa0692060:CDS
TCACCTGATCCTTCTTCGGT+TGG 0.481943 4_4:-60384439 Msa0692060:CDS
TTAAACAGCCTTGTCTTGGC+GGG 0.484406 4_4:-60384492 Msa0692060:intron
CCCTGATCCTGTTTGACCAT+AGG 0.486954 4_4:+60385836 None:intergenic
TCTGTGCTACGACTTTCATC+TGG 0.487126 4_4:+60386361 None:intergenic
AGGGAAAACCTATACAATGA+TGG 0.487535 4_4:-60385817 Msa0692060:CDS
TAAATCAAGCTGCAAATAGC+AGG 0.488065 4_4:-60385388 Msa0692060:intron
AGTGCTCCTCCGAGTAATGC+TGG 0.490602 4_4:-60388913 Msa0692060:CDS
TTAATAGTCTTCTCAAGAAG+AGG 0.493160 4_4:-60387168 Msa0692060:intron
GAGAACATCGCCATGCTAAA+GGG 0.497657 4_4:-60387489 Msa0692060:CDS
GGCTCAAGGTTTGTATCAGA+TGG 0.498285 4_4:-60388302 Msa0692060:CDS
TCTCCACCATTGTTTCTAGC+AGG 0.498530 4_4:+60389004 None:intergenic
AGTCTCAACAACCTCAAGGC+TGG 0.498705 4_4:-60385725 Msa0692060:CDS
CATGAAACTAAAAGAATCTA+GGG 0.501905 4_4:-60387027 Msa0692060:CDS
GGAGAACATCGCCATGCTAA+AGG 0.503104 4_4:-60387490 Msa0692060:CDS
CATATTTGCCTTGGCCAAGA+AGG 0.504143 4_4:-60384677 Msa0692060:CDS
GTAAGCTTTGAGTTCCTGAA+TGG 0.504300 4_4:+60384643 None:intergenic
AGAAAAGAGGGTACCTCTGA+AGG 0.504818 4_4:+60389172 None:intergenic
CTTTAACAGTTGTGAATGGC+GGG 0.505806 4_4:-60388954 Msa0692060:CDS
TGGTTACCAAAATTCAAAAC+CGG 0.508924 4_4:-60389228 Msa0692060:CDS
AGTTTCTCTCAACCGGTCAC+CGG 0.509568 4_4:+60384838 None:intergenic
AGTGACTCGCCAACCGAAGA+AGG 0.511481 4_4:+60384430 None:intergenic
TCGCCAACCGAAGAAGGATC+AGG 0.514072 4_4:+60384436 None:intergenic
ATTAAACAGCCTTGTCTTGG+CGG 0.514238 4_4:-60384493 Msa0692060:intron
ATGCACTTGACTGCTACAAA+TGG 0.519825 4_4:+60384271 None:intergenic
ATGATCTTCCTTCTTGGCCA+AGG 0.523814 4_4:+60384669 None:intergenic
CAAGCTTTAACAGTTGTGAA+TGG 0.525226 4_4:-60388958 Msa0692060:CDS
CGACTTTCATCTGGCAACAA+AGG 0.530807 4_4:+60386370 None:intergenic
GGGAAAACCTATACAATGAT+GGG 0.535898 4_4:-60385816 Msa0692060:CDS
CAGAATATAAACTTATAGAA+GGG 0.536777 4_4:-60386545 Msa0692060:CDS
GGAAAGATGTGAAAATATGG+TGG 0.536845 4_4:-60388337 Msa0692060:CDS
GTGAATGGCGGGCACGATGT+TGG 0.538827 4_4:-60388943 Msa0692060:CDS
TGTAGATAATAAATCGCGAA+TGG 0.540795 4_4:+60385556 None:intergenic
AGAGTCAGTAGCGCGGCCAT+TGG 0.545473 4_4:+60384345 None:intergenic
CAAACGTGTAGAGAAAGAAA+AGG 0.546172 4_4:-60387523 Msa0692060:CDS
GAGGGTACCTCTGAAGGGGT+TGG 0.550883 4_4:+60389178 None:intergenic
GCCTCACGCGACAGAATACA+CGG 0.553941 4_4:+60386392 None:intergenic
GAAAAGAGGGTACCTCTGAA+GGG 0.554971 4_4:+60389173 None:intergenic
GAGACAAGGACAGAATTTGA+AGG 0.556299 4_4:-60386612 Msa0692060:CDS
CTTATACATTTCATTGAGCG+AGG 0.556900 4_4:+60387626 None:intergenic
TCCTCCGAGTAATGCTGGAT+CGG 0.557394 4_4:-60388908 Msa0692060:CDS
GAGTGATGTCATATTTGCCT+TGG 0.561542 4_4:-60384686 Msa0692060:CDS
AAAGGAAGAAGCAGAGAAGT+CGG 0.562965 4_4:-60387990 Msa0692060:intron
CTATTGAGTAGCTCGTCTCC+AGG 0.563163 4_4:+60388271 None:intergenic
CGCTCAATGAAATGTATAAG+CGG 0.563639 4_4:-60387623 Msa0692060:CDS
TGTTTCTGATCTTACAGTAG+TGG 0.564567 4_4:-60385444 Msa0692060:CDS
TCGAATATATGGTGTAAATG+AGG 0.566475 4_4:-60385065 Msa0692060:intron
AGAGTGGTTCAACCGGTGAC+CGG 0.567009 4_4:-60384850 Msa0692060:CDS
ATCTACAAACAGATCATCAT+CGG 0.569372 4_4:-60385540 Msa0692060:CDS
GCGAGTCACTATGCTCACTT+CGG 0.569661 4_4:-60384417 Msa0692060:CDS
GCTGCTTAAAATCAAGGAAG+AGG 0.570111 4_4:-60388074 Msa0692060:CDS
AGGCTGGAAATACGAAATGC+AGG 0.571436 4_4:-60385709 Msa0692060:intron
AGTGAAGTTTATTCTATGAG+AGG 0.574758 4_4:-60387119 Msa0692060:CDS
AGCGAGCGTCTTTCAAAGAG+TGG 0.576346 4_4:-60384866 Msa0692060:CDS
TAAACAGCCTTGTCTTGGCG+GGG 0.576562 4_4:-60384491 Msa0692060:intron
AGAAGAGGCCACAAAGCAGA+AGG 0.576631 4_4:-60387153 Msa0692060:CDS
ATTTCGTATTTCCAGCCTTG+AGG 0.579367 4_4:+60385714 None:intergenic
TTGTAAATACAAGGCTGCAG+TGG 0.581447 4_4:-60387876 Msa0692060:intron
AGCACTGACCAACAAGTACA+AGG 0.583674 4_4:-60384917 Msa0692060:CDS
AGAATATAAACTTATAGAAG+GGG 0.584502 4_4:-60386544 Msa0692060:CDS
TAATCCGATCCAGCATTACT+CGG 0.584877 4_4:+60388904 None:intergenic
AGACAAGGACAGAATTTGAA+GGG 0.588012 4_4:-60386611 Msa0692060:CDS
ATTTGTAGCAGTCAAGTGCA+TGG 0.591821 4_4:-60384269 Msa0692060:three_prime_UTR
ATAAACTTATAGAAGGGGAG+AGG 0.592107 4_4:-60386539 Msa0692060:CDS
CACATCTCCAACCCCTTCAG+AGG 0.594814 4_4:-60389185 Msa0692060:intron
GCTTTAACAGTTGTGAATGG+CGG 0.596409 4_4:-60388955 Msa0692060:CDS
TACTCGGAGGAGCACTACTT+AGG 0.596969 4_4:+60388920 None:intergenic
TTTGAGTCCCCGCCAAGACA+AGG 0.599113 4_4:+60384484 None:intergenic
TGACCGGTTGAGAGAAACTC+AGG 0.600341 4_4:-60384834 Msa0692060:intron
ACACCTCGTCGTCAGACCAA+TGG 0.603841 4_4:-60384361 Msa0692060:CDS
CCTATGGTCAAACAGGATCA+GGG 0.605281 4_4:-60385836 Msa0692060:CDS
AAGCAAGGCTTGATATTGAG+AGG 0.606395 4_4:-60387832 Msa0692060:CDS
GATTCAAAGTGCAAATCAGA+AGG 0.607548 4_4:-60387765 Msa0692060:intron
CGGCCATTGGTCTGACGACG+AGG 0.613765 4_4:+60384358 None:intergenic
GATGAAAGTCGTAGCACAGA+AGG 0.616359 4_4:-60386358 Msa0692060:CDS
AGTTTGATTAATTCTAACAA+CGG 0.617876 4_4:-60384219 Msa0692060:three_prime_UTR
TTTGTAGCAGTCAAGTGCAT+GGG 0.618443 4_4:-60384268 Msa0692060:three_prime_UTR
TATACAATGATGGGAAGACC+TGG 0.618927 4_4:-60385807 Msa0692060:CDS
GAAAGAAAAGGCTACTGCAG+AGG 0.619356 4_4:-60387511 Msa0692060:CDS
AGTAAGTTGACCCTTTAGCA+TGG 0.622488 4_4:+60387479 None:intergenic
TCCGTGTATTCTGTCGCGTG+AGG 0.624664 4_4:-60386393 Msa0692060:CDS
TCAATGGAAACTTCTGGACG+AGG 0.630866 4_4:-60386313 Msa0692060:CDS
ATTAAAAGCAAGTGAACTGG+AGG 0.633866 4_4:-60386973 Msa0692060:intron
ACTACTCTTTCCGAGGACCT+CGG 0.636188 4_4:-60387803 Msa0692060:CDS
AAAAGAGGGTACCTCTGAAG+GGG 0.638735 4_4:+60389174 None:intergenic
TAAGCACCTGCTAGAAACAA+TGG 0.641863 4_4:-60389010 Msa0692060:CDS
GTGTGAGTGATAATGGAGGC+CGG 0.651317 4_4:+60389209 None:intergenic
ATCATCGGATGTATCACGCG+TGG 0.653768 4_4:-60385525 Msa0692060:CDS
GTCACATACTACTCTTTCCG+AGG 0.654450 4_4:-60387810 Msa0692060:CDS
AAACAGTCTCAACAACCTCA+AGG 0.655111 4_4:-60385729 Msa0692060:CDS
GACGAGCTACTCAATAGACC+AGG 0.656048 4_4:-60388265 Msa0692060:CDS
AAAGACGCTCGCTACCAGCA+AGG 0.659107 4_4:+60384876 None:intergenic
TTTCTAAAGAGAGAGAAGCA+AGG 0.661679 4_4:-60387847 Msa0692060:CDS
ATGTATCTGTATTCGAGACA+AGG 0.666554 4_4:-60386626 Msa0692060:CDS
AATATTTGTTCTAACGAACG+AGG 0.684845 4_4:+60385759 None:intergenic
GCACCTGCTAGAAACAATGG+TGG 0.685189 4_4:-60389007 Msa0692060:CDS
TCCGATCCAGCATTACTCGG+AGG 0.713746 4_4:+60388907 None:intergenic
TCAAACGAGAGTCAGTAGCG+CGG 0.759318 4_4:+60384338 None:intergenic
GTGTGTGTGAGTGATAATGG+AGG 0.786079 4_4:+60389205 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! ATATTTGAATTTGAAATTAA+AGG - chr4_4:60384721-60384740 Msa0692060:intron 10.0%
!!! TATTTGAATTTGAAATTAAA+GGG - chr4_4:60384722-60384741 Msa0692060:intron 10.0%
!!! ATTTTTTTCCAAAATTTAAA+AGG + chr4_4:60385520-60385539 None:intergenic 10.0%
!! ATATCTTTATTAGATTAAAA+TGG - chr4_4:60388176-60388195 Msa0692060:intron 10.0%
!!! ATTTGAATTTGAAATTAAAG+GGG - chr4_4:60384723-60384742 Msa0692060:intron 15.0%
!!! TATATATTTACTTTTTAACC+AGG - chr4_4:60384963-60384982 Msa0692060:intron 15.0%
!!! ATATATTTACTTTTTAACCA+GGG - chr4_4:60384964-60384983 Msa0692060:intron 15.0%
!! TTGGAAAAAAATAATATGAA+AGG - chr4_4:60385528-60385547 Msa0692060:CDS 15.0%
!! AAAATATCTTTGTAAATACA+AGG - chr4_4:60385575-60385594 Msa0692060:CDS 15.0%
!! TAGTTATGATCTTATTAAAT+TGG - chr4_4:60387251-60387270 Msa0692060:intron 15.0%
!!! AAATATGATGTTTTCATTTT+AGG - chr4_4:60387589-60387608 Msa0692060:CDS 15.0%
!!! ATCTAATTCTAGTTATAAAA+TGG + chr4_4:60388137-60388156 None:intergenic 15.0%
!!! AACATAATTTGATATGATTT+TGG - chr4_4:60388216-60388235 Msa0692060:CDS 15.0%
!!! TTTAATTGTATTGATTATTC+TGG - chr4_4:60388298-60388317 Msa0692060:CDS 15.0%
!!! TATTTTGAAATGAGAAAAGA+GGG + chr4_4:60384303-60384322 None:intergenic 20.0%
!!! ATATTTTGAAATGAGAAAAG+AGG + chr4_4:60384304-60384323 None:intergenic 20.0%
!!! ATTAAACCTTTCTTTCTTTT+TGG + chr4_4:60384635-60384654 None:intergenic 20.0%
!! GAAAGAAAGGTTTAATTATA+AGG - chr4_4:60384639-60384658 Msa0692060:CDS 20.0%
!! CTATATAGCATTTAAACTTA+AGG + chr4_4:60384691-60384710 None:intergenic 20.0%
!! AATATCAAGTTCAATGTATA+TGG - chr4_4:60384748-60384767 Msa0692060:intron 20.0%
!!! TAACTTGTGTTTAAATACTA+CGG + chr4_4:60384841-60384860 None:intergenic 20.0%
!! CTTTCTGTTATTCAAATTTA+GGG + chr4_4:60384867-60384886 None:intergenic 20.0%
!!! AAATCGTTTTTCTTATTCAA+AGG + chr4_4:60385080-60385099 None:intergenic 20.0%
!!! TGTAACTCTTTATGTTTTTT+AGG - chr4_4:60385102-60385121 Msa0692060:CDS 20.0%
!!! ATATGGTGGATTATATAAAA+AGG - chr4_4:60385137-60385156 Msa0692060:intron 20.0%
!!! AAGCAAAAAAGTATAGAAAT+CGG - chr4_4:60385247-60385266 Msa0692060:intron 20.0%
!! ATAAATAAATCTAGGCATAT+TGG + chr4_4:60385344-60385363 None:intergenic 20.0%
!! TTTACAAGAGAAATTGATAA+AGG - chr4_4:60385452-60385471 Msa0692060:CDS 20.0%
!!! TTTTCAAAGCTTATTATGAT+TGG + chr4_4:60385559-60385578 None:intergenic 20.0%
!! TTAATTATTGTCTTCATTGA+TGG - chr4_4:60385800-60385819 Msa0692060:CDS 20.0%
!! TCAATTAAGTTCAATAACTT+AGG + chr4_4:60386202-60386221 None:intergenic 20.0%
!! AAGGAAATTGAATAATATAC+CGG + chr4_4:60386265-60386284 None:intergenic 20.0%
!! ATATTTAATAGAAGGAAATC+AGG + chr4_4:60386525-60386544 None:intergenic 20.0%
!! ATAGTGTGATATTTAATAGA+AGG + chr4_4:60386533-60386552 None:intergenic 20.0%
!! ATTGAAAGAGAATCAAATAA+AGG - chr4_4:60386604-60386623 Msa0692060:CDS 20.0%
!!! CAACATGATAATGATAATAA+TGG + chr4_4:60386783-60386802 None:intergenic 20.0%
!! TCAGAATATAAACTTATAGA+AGG - chr4_4:60386914-60386933 Msa0692060:intron 20.0%
!! CAGAATATAAACTTATAGAA+GGG - chr4_4:60386915-60386934 Msa0692060:intron 20.0%
!! AGAATATAAACTTATAGAAG+GGG - chr4_4:60386916-60386935 Msa0692060:intron 20.0%
!!! AAAATTACACAATACCATTT+TGG - chr4_4:60386952-60386971 Msa0692060:intron 20.0%
!! CTTATAATCAACAAATCTTT+CGG + chr4_4:60386990-60387009 None:intergenic 20.0%
!! AAAACTGAGATTGTTTAATA+AGG + chr4_4:60387026-60387045 None:intergenic 20.0%
!! ATCTATTAATGCTACATATA+AGG - chr4_4:60387485-60387504 Msa0692060:CDS 20.0%
!! TATTTCAGAATAAATCCAAA+TGG + chr4_4:60387574-60387593 None:intergenic 20.0%
!!! GTTCTTGTTATAAAATTTTC+AGG - chr4_4:60387854-60387873 Msa0692060:CDS 20.0%
!! TTCATTTATCATTTGTAATC+AGG - chr4_4:60388726-60388745 Msa0692060:intron 20.0%
!!! ACTCATTTTCATTTTTATTG+TGG + chr4_4:60389224-60389243 None:intergenic 20.0%
!! AGTTTGATTAATTCTAACAA+CGG - chr4_4:60389241-60389260 Msa0692060:exon 20.0%
!! ATTCACCTCATTTTAAATTC+TGG - chr4_4:60384335-60384354 Msa0692060:CDS 25.0%
!! TTCACCTCATTTTAAATTCT+GGG - chr4_4:60384336-60384355 Msa0692060:CDS 25.0%
!! ATTGAAGTTTCAGAATTTTG+TGG - chr4_4:60384423-60384442 Msa0692060:CDS 25.0%
!! TTGAAGTTTCAGAATTTTGT+GGG - chr4_4:60384424-60384443 Msa0692060:CDS 25.0%
! AAAAAGCCAAAAAGAAAGAA+AGG - chr4_4:60384626-60384645 Msa0692060:intron 25.0%
!!! AGTTCAAGTTTGAAATTTTG+TGG - chr4_4:60384664-60384683 Msa0692060:CDS 25.0%
! CCTTTCTGTTATTCAAATTT+AGG + chr4_4:60384868-60384887 None:intergenic 25.0%
! CCTAAATTTGAATAACAGAA+AGG - chr4_4:60384865-60384884 Msa0692060:CDS 25.0%
! TTAGGAAAGATGTGAAAATA+TGG - chr4_4:60385120-60385139 Msa0692060:CDS 25.0%
!!! GTGAATTCTTTAATTTTTCC+TGG + chr4_4:60385216-60385235 None:intergenic 25.0%
! GGAAAAATTAAAGAATTCAC+TGG - chr4_4:60385216-60385235 Msa0692060:intron 25.0%
!!! GATTTCTATACTTTTTTGCT+TGG + chr4_4:60385248-60385267 None:intergenic 25.0%
! GCAATAGCATTTATTAATCA+CGG + chr4_4:60385305-60385324 None:intergenic 25.0%
!! GTCTTTTGCCTTTTAAATTT+TGG - chr4_4:60385509-60385528 Msa0692060:CDS 25.0%
!! ATTGGAATTCAAGTTAGAAT+AGG - chr4_4:60386045-60386064 Msa0692060:intron 25.0%
! GGTATATTATTCAATTTCCT+TGG - chr4_4:60386264-60386283 Msa0692060:intron 25.0%
! TCATGAAACTAAAAGAATCT+AGG - chr4_4:60386432-60386451 Msa0692060:intron 25.0%
! CATGAAACTAAAAGAATCTA+GGG - chr4_4:60386433-60386452 Msa0692060:intron 25.0%
! TTTATTATTAGAGTCATGAC+AGG - chr4_4:60386553-60386572 Msa0692060:CDS 25.0%
! TATCTTACAAAAAACACAAG+TGG + chr4_4:60386723-60386742 None:intergenic 25.0%
! AATTGCATATGTTTCTTGTT+AGG - chr4_4:60386805-60386824 Msa0692060:intron 25.0%
!!! TAAACAATCTCAGTTTTAAC+AGG - chr4_4:60387029-60387048 Msa0692060:CDS 25.0%
!!! AGTTTTAACAGGAGTTAAAA+GGG - chr4_4:60387040-60387059 Msa0692060:CDS 25.0%
! ATTCAGTTATCCATTATCAA+TGG - chr4_4:60387131-60387150 Msa0692060:CDS 25.0%
! CAAATTTAAAAGAATGCTTC+TGG + chr4_4:60387308-60387327 None:intergenic 25.0%
!!! TCATTTTTCACATTTTTCCT+TGG - chr4_4:60387447-60387466 Msa0692060:intron 25.0%
! TACATTACAATGCAATAATG+AGG + chr4_4:60387806-60387825 None:intergenic 25.0%
!! TTTTATAACAAGAACCATCT+CGG + chr4_4:60387849-60387868 None:intergenic 25.0%
! TTAGATTAAAATGGACAAAC+TGG - chr4_4:60388185-60388204 Msa0692060:intron 25.0%
! TTATGATTATGGAAGATTGA+GGG + chr4_4:60388479-60388498 None:intergenic 25.0%
! ATCTTCCATAATCATAACAA+TGG - chr4_4:60388482-60388501 Msa0692060:intron 25.0%
! TGAAATAAAATAAGCACAGA+TGG + chr4_4:60388693-60388712 None:intergenic 25.0%
!! GATGATTATTTCTTTGTCAT+TGG - chr4_4:60388901-60388920 Msa0692060:CDS 25.0%
TGGTTACCAAAATTCAAAAC+CGG - chr4_4:60384232-60384251 Msa0692060:three_prime_UTR 30.0%
! ACATCCCAGAATTTAAAATG+AGG + chr4_4:60384343-60384362 None:intergenic 30.0%
! TGCCTTATTCTTCCATTAAT+CGG + chr4_4:60384484-60384503 None:intergenic 30.0%
GACAAGTATTCTTGTAAACT+GGG - chr4_4:60384815-60384834 Msa0692060:intron 30.0%
AATATGAGTAATCAAGCAGT+AGG + chr4_4:60385037-60385056 None:intergenic 30.0%
GGATTATATAAAAAGGCTCA+AGG - chr4_4:60385144-60385163 Msa0692060:intron 30.0%
!!! TTTACCGATTTTCTTCACTT+CGG - chr4_4:60385278-60385297 Msa0692060:intron 30.0%
GAAGAAGAAAAAAAGTGGAA+AGG + chr4_4:60385754-60385773 None:intergenic 30.0%
GATTGGAAGAAGAAAAAAAG+TGG + chr4_4:60385759-60385778 None:intergenic 30.0%
AGTTTAATTCCTGCAATGAT+TGG + chr4_4:60385776-60385795 None:intergenic 30.0%
! CACATGTGATTCTTTTCAAT+TGG - chr4_4:60386027-60386046 Msa0692060:intron 30.0%
ACTCATTCTTTATCTTCTTC+TGG - chr4_4:60386077-60386096 Msa0692060:CDS 30.0%
CTCATTCTTTATCTTCTTCT+GGG - chr4_4:60386078-60386097 Msa0692060:CDS 30.0%
GAAGACTATTAAAAGAACCA+AGG + chr4_4:60386284-60386303 None:intergenic 30.0%
TTAATAGTCTTCTCAAGAAG+AGG - chr4_4:60386292-60386311 Msa0692060:intron 30.0%
AGTGAAGTTTATTCTATGAG+AGG - chr4_4:60386341-60386360 Msa0692060:CDS 30.0%
ATATAGAACCATAACAGCTT+AGG - chr4_4:60386740-60386759 Msa0692060:intron 30.0%
ATAACTATCCTAAGCTGTTA+TGG + chr4_4:60386751-60386770 None:intergenic 30.0%
GGTTCAATGAATTACCAAAA+TGG + chr4_4:60386969-60386988 None:intergenic 30.0%
!! CAGTTTTAACAGGAGTTAAA+AGG - chr4_4:60387039-60387058 Msa0692060:CDS 30.0%
! CACAAGAGATATACCATTTT+GGG + chr4_4:60387184-60387203 None:intergenic 30.0%
! TCACAAGAGATATACCATTT+TGG + chr4_4:60387185-60387204 None:intergenic 30.0%
!!! GTGACTCCTATTTTGTTTTT+AGG - chr4_4:60387282-60387301 Msa0692060:intron 30.0%
TTCTGGCCTAAAAACAAAAT+AGG + chr4_4:60387291-60387310 None:intergenic 30.0%
! CATTTTTCCTTGGATTTCTT+TGG - chr4_4:60387457-60387476 Msa0692060:intron 30.0%
AATATTTGTTCTAACGAACG+AGG + chr4_4:60387704-60387723 None:intergenic 30.0%
!!! AAATTTTCAGGTGTCAATGT+TGG - chr4_4:60387866-60387885 Msa0692060:CDS 30.0%
TGTAGATAATAAATCGCGAA+TGG + chr4_4:60387907-60387926 None:intergenic 30.0%
ATCTACAAACAGATCATCAT+CGG - chr4_4:60387920-60387939 Msa0692060:intron 30.0%
ACAATCAAACATGACGTAAA+TGG - chr4_4:60387984-60388003 Msa0692060:intron 30.0%
!! ATTTTGGTGCAACAAAATGT+TGG - chr4_4:60388232-60388251 Msa0692060:CDS 30.0%
TCGAATATATGGTGTAAATG+AGG - chr4_4:60388395-60388414 Msa0692060:intron 30.0%
TATGATTATGGAAGATTGAG+GGG + chr4_4:60388478-60388497 None:intergenic 30.0%
GTTATGATTATGGAAGATTG+AGG + chr4_4:60388480-60388499 None:intergenic 30.0%
GTAATTATCATTCTCTCACA+TGG - chr4_4:60388853-60388872 Msa0692060:CDS 30.0%
TTGAGAGATTCTGCTTCAAA+TGG - chr4_4:60384212-60384231 Msa0692060:three_prime_UTR 35.0%
ATGATACTGCAATGAAACAG+AGG + chr4_4:60384373-60384392 None:intergenic 35.0%
CTCCGATTAATGGAAGAATA+AGG - chr4_4:60384479-60384498 Msa0692060:CDS 35.0%
! CAAGCTTTAACAGTTGTGAA+TGG - chr4_4:60384502-60384521 Msa0692060:intron 35.0%
CGACAAGTATTCTTGTAAAC+TGG - chr4_4:60384814-60384833 Msa0692060:intron 35.0%
GAGAAAACAAGATGTGATCA+CGG + chr4_4:60384928-60384947 None:intergenic 35.0%
GGAAAGATGTGAAAATATGG+TGG - chr4_4:60385123-60385142 Msa0692060:CDS 35.0%
! AGAGATGCTGCTTAAAATCA+AGG - chr4_4:60385380-60385399 Msa0692060:intron 35.0%
! TTTCTAAAGAGAGAGAAGCA+AGG - chr4_4:60385613-60385632 Msa0692060:intron 35.0%
GATTCAAAGTGCAAATCAGA+AGG - chr4_4:60385695-60385714 Msa0692060:intron 35.0%
TTTCTTCTTCCAATCATTGC+AGG - chr4_4:60385764-60385783 Msa0692060:CDS 35.0%
CTTATACATTTCATTGAGCG+AGG + chr4_4:60385837-60385856 None:intergenic 35.0%
CGCTCAATGAAATGTATAAG+CGG - chr4_4:60385837-60385856 Msa0692060:CDS 35.0%
CAAACGTGTAGAGAAAGAAA+AGG - chr4_4:60385937-60385956 Msa0692060:intron 35.0%
TGTGAAAGCAGAACTTACAA+TGG + chr4_4:60386011-60386030 None:intergenic 35.0%
TCATTTCGTATTCATGCAAC+CGG - chr4_4:60386243-60386262 Msa0692060:intron 35.0%
TTTGCGCTTGAGATAATTGA+CGG + chr4_4:60386397-60386416 None:intergenic 35.0%
GACATTAAAAGCAAGTGAAC+TGG - chr4_4:60386484-60386503 Msa0692060:intron 35.0%
ATTAAAAGCAAGTGAACTGG+AGG - chr4_4:60386487-60386506 Msa0692060:intron 35.0%
ACAAAATTGTTGCGTGCTAT+TGG - chr4_4:60386688-60386707 Msa0692060:intron 35.0%
ATGTATCTGTATTCGAGACA+AGG - chr4_4:60386834-60386853 Msa0692060:CDS 35.0%
AGACAAGGACAGAATTTGAA+GGG - chr4_4:60386849-60386868 Msa0692060:CDS 35.0%
ATAAACTTATAGAAGGGGAG+AGG - chr4_4:60386921-60386940 Msa0692060:intron 35.0%
CCAGAAGTTTCCATTGATAA+TGG + chr4_4:60387144-60387163 None:intergenic 35.0%
CCATTATCAATGGAAACTTC+TGG - chr4_4:60387141-60387160 Msa0692060:CDS 35.0%
! AAGTGCTCTTGATGGTTATA+AGG - chr4_4:60387392-60387411 Msa0692060:intron 35.0%
ATCAGAACCAAAGAAATCCA+AGG + chr4_4:60387467-60387486 None:intergenic 35.0%
ACACATACACATCAACCATT+TGG - chr4_4:60387556-60387575 Msa0692060:CDS 35.0%
AGGGAAAACCTATACAATGA+TGG - chr4_4:60387643-60387662 Msa0692060:intron 35.0%
GGGAAAACCTATACAATGAT+GGG - chr4_4:60387644-60387663 Msa0692060:intron 35.0%
ATACGAAATGCAGGTAACAT+TGG - chr4_4:60387760-60387779 Msa0692060:intron 35.0%
! TTTTTGAACATGATCCGAGA+TGG - chr4_4:60387832-60387851 Msa0692060:CDS 35.0%
TTGATTGTGTATTGCTTTCC+AGG + chr4_4:60387972-60387991 None:intergenic 35.0%
! TGTTTCTGATCTTACAGTAG+TGG - chr4_4:60388016-60388035 Msa0692060:CDS 35.0%
TAAATCAAGCTGCAAATAGC+AGG - chr4_4:60388072-60388091 Msa0692060:CDS 35.0%
! TTTTTGCCTCTTAGATCTGT+GGG - chr4_4:60388321-60388340 Msa0692060:CDS 35.0%
GTGTTCACTCTTCGAATATA+TGG - chr4_4:60388384-60388403 Msa0692060:intron 35.0%
GCATGCCATTGTTATGATTA+TGG + chr4_4:60388490-60388509 None:intergenic 35.0%
CTCTGGCAGAGAAATAAATT+AGG + chr4_4:60388525-60388544 None:intergenic 35.0%
! ATGATTAAACAGCCTTGTCT+TGG - chr4_4:60388964-60388983 Msa0692060:CDS 35.0%
AGAGTAAATGCTTGTGAGAT+TGG - chr4_4:60389075-60389094 Msa0692060:intron 35.0%
TTGAAGCAGAATCTCTCAAC+TGG + chr4_4:60384211-60384230 None:intergenic 40.0%
GATGTGTGTGTGAGTGATAA+TGG + chr4_4:60384261-60384280 None:intergenic 40.0%
TAAGCACCTGCTAGAAACAA+TGG - chr4_4:60384450-60384469 Msa0692060:CDS 40.0%
GCTTTAACAGTTGTGAATGG+CGG - chr4_4:60384505-60384524 Msa0692060:intron 40.0%
CTTTAACAGTTGTGAATGGC+GGG - chr4_4:60384506-60384525 Msa0692060:intron 40.0%
TAATCCGATCCAGCATTACT+CGG + chr4_4:60384559-60384578 None:intergenic 40.0%
AGTAATGCTGGATCGGATTA+TGG - chr4_4:60384559-60384578 Msa0692060:intron 40.0%
!! CAGAAAGGTATTGCAATCAG+AGG - chr4_4:60384880-60384899 Msa0692060:CDS 40.0%
CAAGATGTGATCACGGAATT+TGG + chr4_4:60384921-60384940 None:intergenic 40.0%
ATCTGTTAGAACAGAAACCC+TGG + chr4_4:60384984-60385003 None:intergenic 40.0%
GCTGCTTAAAATCAAGGAAG+AGG - chr4_4:60385386-60385405 Msa0692060:intron 40.0%
AAAGGAAGAAGCAGAGAAGT+CGG - chr4_4:60385470-60385489 Msa0692060:CDS 40.0%
TTGTAAATACAAGGCTGCAG+TGG - chr4_4:60385584-60385603 Msa0692060:CDS 40.0%
AAGCAAGGCTTGATATTGAG+AGG - chr4_4:60385628-60385647 Msa0692060:intron 40.0%
! AGTAAGTTGACCCTTTAGCA+TGG + chr4_4:60385984-60386003 None:intergenic 40.0%
AAGATCATCCTTCTGCTTTG+TGG + chr4_4:60386318-60386337 None:intergenic 40.0%
GGAGAACTCTTGCATTGAAT+TGG - chr4_4:60386454-60386473 Msa0692060:intron 40.0%
GAGACAAGGACAGAATTTGA+AGG - chr4_4:60386848-60386867 Msa0692060:CDS 40.0%
! GAGATATACCATTTTGGGCT+AGG + chr4_4:60387179-60387198 None:intergenic 40.0%
! CTTGTACAAAGTGCTCTTGA+TGG - chr4_4:60387384-60387403 Msa0692060:intron 40.0%
TAGGTTTGCATCTTTGCCTA+TGG - chr4_4:60387608-60387627 Msa0692060:CDS 40.0%
ATCTTTGCCTATGGTCAAAC+AGG - chr4_4:60387617-60387636 Msa0692060:CDS 40.0%
AGGTCTTCCCATCATTGTAT+AGG + chr4_4:60387654-60387673 None:intergenic 40.0%
! TATACAATGATGGGAAGACC+TGG - chr4_4:60387653-60387672 Msa0692060:intron 40.0%
CTGGACATCCTGATGAAAAA+GGG - chr4_4:60387672-60387691 Msa0692060:intron 40.0%
!! GGTATCAACCCTTTTTCATC+AGG + chr4_4:60387683-60387702 None:intergenic 40.0%
AAACAGTCTCAACAACCTCA+AGG - chr4_4:60387731-60387750 Msa0692060:intron 40.0%
ATTTCGTATTTCCAGCCTTG+AGG + chr4_4:60387749-60387768 None:intergenic 40.0%
! GTTTTTGCCTCTTAGATCTG+TGG - chr4_4:60388320-60388339 Msa0692060:CDS 40.0%
! GTTTTTCCCACAGATCTAAG+AGG + chr4_4:60388330-60388349 None:intergenic 40.0%
TCAGAACACCTTGTACTTGT+TGG + chr4_4:60388554-60388573 None:intergenic 40.0%
CTGAATCTAATTGACCTTGC+TGG - chr4_4:60388570-60388589 Msa0692060:intron 40.0%
CTTTCAAAGAGTGGTTCAAC+CGG - chr4_4:60388603-60388622 Msa0692060:intron 40.0%
ATACCTGAGTTTCTCTCAAC+CGG + chr4_4:60388632-60388651 None:intergenic 40.0%
GAGTGATGTCATATTTGCCT+TGG - chr4_4:60388774-60388793 Msa0692060:intron 40.0%
!! GTAAGCTTTGAGTTCCTGAA+TGG + chr4_4:60388820-60388839 None:intergenic 40.0%
! ATTAAACAGCCTTGTCTTGG+CGG - chr4_4:60388967-60388986 Msa0692060:CDS 40.0%
ATGCACTTGACTGCTACAAA+TGG + chr4_4:60389192-60389211 None:intergenic 40.0%
ATTTGTAGCAGTCAAGTGCA+TGG - chr4_4:60389191-60389210 Msa0692060:CDS 40.0%
TTTGTAGCAGTCAAGTGCAT+GGG - chr4_4:60389192-60389211 Msa0692060:CDS 40.0%
!!! TGGAGGCCGGTTTTGAATTT+TGG + chr4_4:60384241-60384260 None:intergenic 45.0%
!! GTGTGTGTGAGTGATAATGG+AGG + chr4_4:60384258-60384277 None:intergenic 45.0%
!! AAAAGAGGGTACCTCTGAAG+GGG + chr4_4:60384289-60384308 None:intergenic 45.0%
!! GAAAAGAGGGTACCTCTGAA+GGG + chr4_4:60384290-60384309 None:intergenic 45.0%
!! AGAAAAGAGGGTACCTCTGA+AGG + chr4_4:60384291-60384310 None:intergenic 45.0%
!! TCTCCACCATTGTTTCTAGC+AGG + chr4_4:60384459-60384478 None:intergenic 45.0%
! ATGGTGGAGACTCCGATTAA+TGG - chr4_4:60384469-60384488 Msa0692060:CDS 45.0%
! GGTATTGCAATCAGAGGTGT+AGG - chr4_4:60384886-60384905 Msa0692060:CDS 45.0%
GGCTCAAGGTTTGTATCAGA+TGG - chr4_4:60385158-60385177 Msa0692060:intron 45.0%
TATCAGATGGTTCCAAGACC+TGG - chr4_4:60385171-60385190 Msa0692060:intron 45.0%
CGGTCCGAAGTGAAGAAAAT+CGG + chr4_4:60385285-60385304 None:intergenic 45.0%
GTCACATACTACTCTTTCCG+AGG - chr4_4:60385650-60385669 Msa0692060:intron 45.0%
GAAAGAAAAGGCTACTGCAG+AGG - chr4_4:60385949-60385968 Msa0692060:intron 45.0%
GAGAACATCGCCATGCTAAA+GGG - chr4_4:60385971-60385990 Msa0692060:intron 45.0%
AAAGCAAGTGAACTGGAGGT+TGG - chr4_4:60386491-60386510 Msa0692060:intron 45.0%
AGCTGCAGAGAAGAAATTGC+AGG - chr4_4:60386646-60386665 Msa0692060:intron 45.0%
CGACTTTCATCTGGCAACAA+AGG + chr4_4:60387093-60387112 None:intergenic 45.0%
TCTGTGCTACGACTTTCATC+TGG + chr4_4:60387102-60387121 None:intergenic 45.0%
GATGAAAGTCGTAGCACAGA+AGG - chr4_4:60387102-60387121 Msa0692060:CDS 45.0%
TCAATGGAAACTTCTGGACG+AGG - chr4_4:60387147-60387166 Msa0692060:CDS 45.0%
GGAATTGACCTAGCCCAAAA+TGG - chr4_4:60387168-60387187 Msa0692060:intron 45.0%
GCTACATATAAGGCACGTCT+TGG - chr4_4:60387495-60387514 Msa0692060:CDS 45.0%
CCTATGGTCAAACAGGATCA+GGG - chr4_4:60387624-60387643 Msa0692060:CDS 45.0%
!! CCTTTTTCATCAGGATGTCC+AGG + chr4_4:60387674-60387693 None:intergenic 45.0%
CCTGGACATCCTGATGAAAA+AGG - chr4_4:60387671-60387690 Msa0692060:intron 45.0%
AGGCTGGAAATACGAAATGC+AGG - chr4_4:60387751-60387770 Msa0692060:intron 45.0%
GATGTATCACGCGTGGAAAA+TGG - chr4_4:60387942-60387961 Msa0692060:intron 45.0%
!! AGCACTGACCAACAAGTACA+AGG - chr4_4:60388543-60388562 Msa0692060:intron 45.0%
CATATTTGCCTTGGCCAAGA+AGG - chr4_4:60388783-60388802 Msa0692060:intron 45.0%
ATGATCTTCCTTCTTGGCCA+AGG + chr4_4:60388794-60388813 None:intergenic 45.0%
TGGCACATGATCTTCCTTCT+TGG + chr4_4:60388800-60388819 None:intergenic 45.0%
! AGGAAGATCATGTGCCATTC+AGG - chr4_4:60388803-60388822 Msa0692060:intron 45.0%
! TTAAACAGCCTTGTCTTGGC+GGG - chr4_4:60388968-60388987 Msa0692060:CDS 45.0%
CATCTCACCTGATCCTTCTT+CGG - chr4_4:60389017-60389036 Msa0692060:CDS 45.0%
!! TAAATAAAATAAATAAATCT+AGG + chr4_4:60385352-60385371 None:intergenic 5.0%
!! GTGTGAGTGATAATGGAGGC+CGG + chr4_4:60384254-60384273 None:intergenic 50.0%
GCACCTGCTAGAAACAATGG+TGG - chr4_4:60384453-60384472 Msa0692060:CDS 50.0%
!! TACTCGGAGGAGCACTACTT+AGG + chr4_4:60384543-60384562 None:intergenic 50.0%
TCCTCCGAGTAATGCTGGAT+CGG - chr4_4:60384552-60384571 Msa0692060:intron 50.0%
CTATTGAGTAGCTCGTCTCC+AGG + chr4_4:60385192-60385211 None:intergenic 50.0%
GACGAGCTACTCAATAGACC+AGG - chr4_4:60385195-60385214 Msa0692060:intron 50.0%
ACTACTCTTTCCGAGGACCT+CGG - chr4_4:60385657-60385676 Msa0692060:intron 50.0%
! TTCAGCTTTTCCGAGGTCCT+CGG + chr4_4:60385670-60385689 None:intergenic 50.0%
! TCTCTCGTTCAGCTTTTCCG+AGG + chr4_4:60385677-60385696 None:intergenic 50.0%
GGAGAACATCGCCATGCTAA+AGG - chr4_4:60385970-60385989 Msa0692060:intron 50.0%
AGAAGAGGCCACAAAGCAGA+AGG - chr4_4:60386307-60386326 Msa0692060:CDS 50.0%
ACAGGACGAGTTTCTTTCGC+AGG - chr4_4:60386571-60386590 Msa0692060:CDS 50.0%
GCCTATGGTCAAACAGGATC+AGG - chr4_4:60387623-60387642 Msa0692060:CDS 50.0%
CCCTGATCCTGTTTGACCAT+AGG + chr4_4:60387627-60387646 None:intergenic 50.0%
AGTCTCAACAACCTCAAGGC+TGG - chr4_4:60387735-60387754 Msa0692060:intron 50.0%
ATCATCGGATGTATCACGCG+TGG - chr4_4:60387935-60387954 Msa0692060:intron 50.0%
! GTACTTGTTGGTCAGTGCTC+TGG + chr4_4:60388542-60388561 None:intergenic 50.0%
AGCGAGCGTCTTTCAAAGAG+TGG - chr4_4:60388594-60388613 Msa0692060:intron 50.0%
AGTTTCTCTCAACCGGTCAC+CGG + chr4_4:60388625-60388644 None:intergenic 50.0%
TGACCGGTTGAGAGAAACTC+AGG - chr4_4:60388626-60388645 Msa0692060:intron 50.0%
! TAAACAGCCTTGTCTTGGCG+GGG - chr4_4:60388969-60388988 Msa0692060:CDS 50.0%
TCACCTGATCCTTCTTCGGT+TGG - chr4_4:60389021-60389040 Msa0692060:CDS 50.0%
GCGAGTCACTATGCTCACTT+CGG - chr4_4:60389043-60389062 Msa0692060:intron 50.0%
TCAAACGAGAGTCAGTAGCG+CGG + chr4_4:60389125-60389144 None:intergenic 50.0%
CACATCTCCAACCCCTTCAG+AGG - chr4_4:60384275-60384294 Msa0692060:three_prime_UTR 55.0%
AGTGCTCCTCCGAGTAATGC+TGG - chr4_4:60384547-60384566 Msa0692060:intron 55.0%
TCCGATCCAGCATTACTCGG+AGG + chr4_4:60384556-60384575 None:intergenic 55.0%
AGTAGCTCGTCTCCAGGTCT+TGG + chr4_4:60385186-60385205 None:intergenic 55.0%
TCCGTGTATTCTGTCGCGTG+AGG - chr4_4:60387067-60387086 Msa0692060:CDS 55.0%
GCCTCACGCGACAGAATACA+CGG + chr4_4:60387071-60387090 None:intergenic 55.0%
CGCGTGGAAAATGGTACTCC+TGG - chr4_4:60387951-60387970 Msa0692060:intron 55.0%
AAAGACGCTCGCTACCAGCA+AGG + chr4_4:60388587-60388606 None:intergenic 55.0%
AGAGTGGTTCAACCGGTGAC+CGG - chr4_4:60388610-60388629 Msa0692060:intron 55.0%
TTTGAGTCCCCGCCAAGACA+AGG + chr4_4:60388979-60388998 None:intergenic 55.0%
TCGCCAACCGAAGAAGGATC+AGG + chr4_4:60389027-60389046 None:intergenic 55.0%
AGTGACTCGCCAACCGAAGA+AGG + chr4_4:60389033-60389052 None:intergenic 55.0%
ACACCTCGTCGTCAGACCAA+TGG - chr4_4:60389099-60389118 Msa0692060:intron 55.0%
!! GAGGGTACCTCTGAAGGGGT+TGG + chr4_4:60384285-60384304 None:intergenic 60.0%
!! GTGAATGGCGGGCACGATGT+TGG - chr4_4:60384517-60384536 Msa0692060:intron 60.0%
AGAGTCAGTAGCGCGGCCAT+TGG + chr4_4:60389118-60389137 None:intergenic 60.0%
! CGGCCATTGGTCTGACGACG+AGG + chr4_4:60389105-60389124 None:intergenic 65.0%
Chromosome Type Strat End Strand Name
chr4_4 gene 60384172 60389310 60384172 ID=Msa0692060;Name=Msa0692060
chr4_4 mRNA 60384172 60389310 60384172 ID=Msa0692060-mRNA-1;Parent=Msa0692060;Name=Msa0692060-mRNA-1;_AED=0.14;_eAED=0.14;_QI=59|1|1|1|0.93|0.94|17|155|795
chr4_4 exon 60384172 60384506 60384172 ID=Msa0692060-mRNA-1:exon:16545;Parent=Msa0692060-mRNA-1
chr4_4 exon 60384630 60384734 60384630 ID=Msa0692060-mRNA-1:exon:16544;Parent=Msa0692060-mRNA-1
chr4_4 exon 60384835 60384939 60384835 ID=Msa0692060-mRNA-1:exon:16543;Parent=Msa0692060-mRNA-1
chr4_4 exon 60385066 60385147 60385066 ID=Msa0692060-mRNA-1:exon:16542;Parent=Msa0692060-mRNA-1
chr4_4 exon 60385389 60385606 60385389 ID=Msa0692060-mRNA-1:exon:16541;Parent=Msa0692060-mRNA-1
chr4_4 exon 60385710 60385871 60385710 ID=Msa0692060-mRNA-1:exon:16540;Parent=Msa0692060-mRNA-1
chr4_4 exon 60386069 60386178 60386069 ID=Msa0692060-mRNA-1:exon:16539;Parent=Msa0692060-mRNA-1
chr4_4 exon 60386293 60386431 60386293 ID=Msa0692060-mRNA-1:exon:16538;Parent=Msa0692060-mRNA-1
chr4_4 exon 60386509 60386655 60386509 ID=Msa0692060-mRNA-1:exon:16537;Parent=Msa0692060-mRNA-1
chr4_4 exon 60386815 60386889 60386815 ID=Msa0692060-mRNA-1:exon:16536;Parent=Msa0692060-mRNA-1
chr4_4 exon 60386974 60387183 60386974 ID=Msa0692060-mRNA-1:exon:16535;Parent=Msa0692060-mRNA-1
chr4_4 exon 60387470 60387652 60387470 ID=Msa0692060-mRNA-1:exon:16534;Parent=Msa0692060-mRNA-1
chr4_4 exon 60387766 60387885 60387766 ID=Msa0692060-mRNA-1:exon:16533;Parent=Msa0692060-mRNA-1
chr4_4 exon 60387991 60388100 60387991 ID=Msa0692060-mRNA-1:exon:16532;Parent=Msa0692060-mRNA-1
chr4_4 exon 60388214 60388358 60388214 ID=Msa0692060-mRNA-1:exon:16531;Parent=Msa0692060-mRNA-1
chr4_4 exon 60388822 60389052 60388822 ID=Msa0692060-mRNA-1:exon:16530;Parent=Msa0692060-mRNA-1
chr4_4 exon 60389186 60389310 60389186 ID=Msa0692060-mRNA-1:exon:16529;Parent=Msa0692060-mRNA-1
chr4_4 five_prime_UTR 60389252 60389310 60389252 ID=Msa0692060-mRNA-1:five_prime_utr;Parent=Msa0692060-mRNA-1
chr4_4 CDS 60389186 60389251 60389186 ID=Msa0692060-mRNA-1:cds;Parent=Msa0692060-mRNA-1
chr4_4 CDS 60388822 60389052 60388822 ID=Msa0692060-mRNA-1:cds;Parent=Msa0692060-mRNA-1
chr4_4 CDS 60388214 60388358 60388214 ID=Msa0692060-mRNA-1:cds;Parent=Msa0692060-mRNA-1
chr4_4 CDS 60387991 60388100 60387991 ID=Msa0692060-mRNA-1:cds;Parent=Msa0692060-mRNA-1
chr4_4 CDS 60387766 60387885 60387766 ID=Msa0692060-mRNA-1:cds;Parent=Msa0692060-mRNA-1
chr4_4 CDS 60387470 60387652 60387470 ID=Msa0692060-mRNA-1:cds;Parent=Msa0692060-mRNA-1
chr4_4 CDS 60386974 60387183 60386974 ID=Msa0692060-mRNA-1:cds;Parent=Msa0692060-mRNA-1
chr4_4 CDS 60386815 60386889 60386815 ID=Msa0692060-mRNA-1:cds;Parent=Msa0692060-mRNA-1
chr4_4 CDS 60386509 60386655 60386509 ID=Msa0692060-mRNA-1:cds;Parent=Msa0692060-mRNA-1
chr4_4 CDS 60386293 60386431 60386293 ID=Msa0692060-mRNA-1:cds;Parent=Msa0692060-mRNA-1
chr4_4 CDS 60386069 60386178 60386069 ID=Msa0692060-mRNA-1:cds;Parent=Msa0692060-mRNA-1
chr4_4 CDS 60385710 60385871 60385710 ID=Msa0692060-mRNA-1:cds;Parent=Msa0692060-mRNA-1
chr4_4 CDS 60385389 60385606 60385389 ID=Msa0692060-mRNA-1:cds;Parent=Msa0692060-mRNA-1
chr4_4 CDS 60385066 60385147 60385066 ID=Msa0692060-mRNA-1:cds;Parent=Msa0692060-mRNA-1
chr4_4 CDS 60384835 60384939 60384835 ID=Msa0692060-mRNA-1:cds;Parent=Msa0692060-mRNA-1
chr4_4 CDS 60384630 60384734 60384630 ID=Msa0692060-mRNA-1:cds;Parent=Msa0692060-mRNA-1
chr4_4 CDS 60384327 60384506 60384327 ID=Msa0692060-mRNA-1:cds;Parent=Msa0692060-mRNA-1
chr4_4 three_prime_UTR 60384172 60384326 60384172 ID=Msa0692060-mRNA-1:three_prime_utr;Parent=Msa0692060-mRNA-1
Gene Sequence

>Msa0692060

ATGGTTACCAAAATTCAAAACCGGCCTCCATTATCACTCACACACACATCTCCAACCCCTTCAGAGTTTCAGAATTTTGTGGGAGATAAGCACCTGCTAGAAACAATGGTGGAGACTCCGATTAATGGAAGAATAAGGCAAGCTTTAACAGTTGTGAATGGCGGGCACGATGTTGGCCTAAGTAGTGCTCCTCCGAGTAATGCTGGATCGGATTATGGTGTAATAGAGTTCACAAGAGAAGATGTAGAAGCATTGCTAAATGAAAAAGCCAAAAAGAAAGAAAGGTTTAATTATAAGGAAAGATGTGAAAATATGGTGGATTATATAAAAAGGCTCAAGGTTTGTATCAGATGGTTCCAAGACCTGGAGACGAGCTACTCAATAGACCAGGAAAAATTAAAGAATTCACTGGAAATGACCAAGCAAAAAAGTATAGAAATCGAGATGCTGCTTAAAATCAAGGAAGAGGAGCTGAATTTAATTATTATAGAAATGAGAAAGAATTGCACTTCTTTACAAGAGAAATTGATAAAGGAAGAAGCAGAGAAGTCGGCTGCAGTGGAATCTCTTTCTAAAGAGAGAGAAGCAAGGCTTGATATTGAGAGGTCACATACTACTCTTTCCGAGGACCTCGGAAAAGCTGAACGAGAGATTCAAAGTGCAAATCAGAAGATATCCTCGCTCAATGAAATGTATAAGCGGTTACAAGAATACATAACAAGTTTACAACAGTACAATGTAAAACTTCATAATGAGCTTTCATCAGTTGAAGATGAACTCAAACGTGTAGAGAAAGAAAAGGCTACTGCAGAGGAGAACATCGCCATGCTAAAGGGTCAACTTACTTTATCCATTTCTTCTCAAGAAGAGGCCACAAAGCAGAAGGATGATCTTGCTAGTGAAGTTTATTCTATGAGAGGAGAGTTGAAACAAGTAAGAGATGATAGAGACCGTCAATTATCTCAAGCGCAAAGTTTAAATGCTGAGTTCATGAAACTAAAAGAATCTAGGGAGAACTCTTGCATTGAATTGGACAGCTTGACATTAAAAGCAAGTGAACTGGAGGAAAAAAGTTCATTGAAAGAGAATCAAATAAAGGCATTGCAAGAAAAGTTAGCAGCTGCAGAGAAGAAATTGCAGGTGACTGATGTATCTGTATTCGAGACAAGGACAGAATTTGAAGGGCAACAAAAACTTGTTGACGAGTTGCAAAGACGCTTAGAAGATTCAGAATATAAACTTATAGAAGGGGAGAGGCTGCGAAAAAAATTACACAATACCATTTTGGAGTTAAAAGGGAACATCCGTGTATTCTGTCGCGTGAGGCCTTTGTTGCCAGATGAAAGTCGTAGCACAGAAGGCAAGATATTCAGTTATCCATTATCAATGGAAACTTCTGGACGAGGAATTGACCTAGCCCAAAATGGCCAGAAGCATTCTTTTAAATTTGATAAAGTTTTTATACAAGACGTATCACAAGAAGAAGTGTTTGTAGAAGTTTCACAGCTTGTACAAAGTGCTCTTGATGGTTATAAGGTTTGCATCTTTGCCTATGGTCAAACAGGATCAGGGAAAACCTATACAATGATGGGAAGACCTGGACATCCTGATGAAAAAGGGTTGATACCTCGTTCGTTAGAACAAATATTTCAAGCAAAACAGTCTCAACAACCTCAAGGCTGGAAATACGAAATGCAGGTGTCAATGTTGGAAATATACAACGAAACCATTCGCGATTTATTATCTACAAACAGATCATCATCGGATGTATCACGCGTGGAAAATGGTACTCCTGGAAAGCAATACACAATCAAACATGACGTAAATGGAAATACACATGTTTCTGATCTTACAGTAGTGGATGTACACAGTGCGAAAGAAGTCGCGTTTCTTTTAAATCAAGCTGCAAATAGCAGATCTGTGGGAAAAACTCAGATGAATGAACAATCGTCAAGAAGTCATTTCGTGTTCACTCTTCGAATATATGGTGTAAATGAGAGCACTGACCAACAAGTACAAGGTGTTCTGAATCTAATTGACCTTGCTGGTAGCGAGCGTCTTTCAAAGAGTGGTTCAACCGGTGACCGGTTGAGAGAAACTCAGGCAATTAACAAAAGCTTGTCATCATTGAGTGATGTCATATTTGCCTTGGCCAAGAAGGAAGATCATGTGCCATTCAGGAACTCAAAGCTTACATATCTTCTTCAACCTTGTCTTGGCGGGGACTCAAAGACGTTAATGTTTGTAAACATCTCACCTGATCCTTCTTCGGTTGGCGAGTCACTATGCTCACTTCGGTTTGCTTCTAGAGTAAATGCTTGTGAGATTGGAACACCTCGTCGTCAGACCAATGGCCGCGCTACTGACTCTCGTTTGAGCTATTTCTGA

Protein sequence

>Msa0692060

MVTKIQNRPPLSLTHTSPTPSEFQNFVGDKHLLETMVETPINGRIRQALTVVNGGHDVGLSSAPPSNAGSDYGVIEFTREDVEALLNEKAKKKERFNYKERCENMVDYIKRLKVCIRWFQDLETSYSIDQEKLKNSLEMTKQKSIEIEMLLKIKEEELNLIIIEMRKNCTSLQEKLIKEEAEKSAAVESLSKEREARLDIERSHTTLSEDLGKAEREIQSANQKISSLNEMYKRLQEYITSLQQYNVKLHNELSSVEDELKRVEKEKATAEENIAMLKGQLTLSISSQEEATKQKDDLASEVYSMRGELKQVRDDRDRQLSQAQSLNAEFMKLKESRENSCIELDSLTLKASELEEKSSLKENQIKALQEKLAAAEKKLQVTDVSVFETRTEFEGQQKLVDELQRRLEDSEYKLIEGERLRKKLHNTILELKGNIRVFCRVRPLLPDESRSTEGKIFSYPLSMETSGRGIDLAQNGQKHSFKFDKVFIQDVSQEEVFVEVSQLVQSALDGYKVCIFAYGQTGSGKTYTMMGRPGHPDEKGLIPRSLEQIFQAKQSQQPQGWKYEMQVSMLEIYNETIRDLLSTNRSSSDVSRVENGTPGKQYTIKHDVNGNTHVSDLTVVDVHSAKEVAFLLNQAANSRSVGKTQMNEQSSRSHFVFTLRIYGVNESTDQQVQGVLNLIDLAGSERLSKSGSTGDRLRETQAINKSLSSLSDVIFALAKKEDHVPFRNSKLTYLLQPCLGGDSKTLMFVNISPDPSSVGESLCSLRFASRVNACEIGTPRRQTNGRATDSRLSYF*