AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0650070


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0650070 MtrunA17_Chr4g0042061 97.987 795 14 1 1 795 1 793 0.0 1596
Msa0650070 MtrunA17_Chr2g0319271 80.971 762 142 3 36 795 1 761 0.0 1273
Msa0650070 MtrunA17_Chr2g0280421 56.366 809 315 8 1 794 1 786 0.0 853
Msa0650070 MtrunA17_Chr4g0049011 58.520 581 208 7 217 784 72 632 0.0 639
Msa0650070 MtrunA17_Chr1g0191851 45.855 386 184 7 406 784 114 481 6.49e-96 316
Msa0650070 MtrunA17_Chr2g0312631 45.333 375 190 5 408 782 358 717 3.17e-94 317
Msa0650070 MtrunA17_Chr7g0272871 45.407 381 183 8 411 784 99 461 1.30e-92 306
Msa0650070 MtrunA17_Chr5g0411971 39.440 464 242 7 342 784 286 731 1.18e-90 307
Msa0650070 MtrunA17_Chr7g0271961 41.425 449 208 11 352 780 316 729 7.98e-90 304
Msa0650070 MtrunA17_Chr5g0421591 39.009 464 244 7 342 784 261 706 5.26e-89 300
Msa0650070 MtrunA17_Chr5g0421521 43.636 385 199 5 400 784 340 706 6.33e-89 301
Msa0650070 MtrunA17_Chr1g0195111 45.405 370 177 9 422 785 384 734 8.69e-88 299
Msa0650070 MtrunA17_Chr1g0192481 42.935 368 180 7 422 780 46 392 1.10e-83 278
Msa0650070 MtrunA17_Chr5g0447041 35.091 550 256 17 310 780 282 809 3.95e-80 280
Msa0650070 MtrunA17_Chr3g0102921 38.695 429 233 10 365 778 369 782 8.66e-80 278
Msa0650070 MtrunA17_Chr8g0369881 34.074 540 288 15 252 786 731 1207 3.16e-76 269
Msa0650070 MtrunA17_Chr5g0407791 36.287 474 242 10 341 773 755 1209 7.57e-76 268
Msa0650070 MtrunA17_Chr1g0191181 39.494 395 221 7 382 775 37 414 1.22e-75 258
Msa0650070 MtrunA17_Chr7g0257301 35.897 468 239 12 340 780 316 749 1.03e-73 260
Msa0650070 MtrunA17_Chr4g0045381 40.669 359 174 12 431 771 190 527 6.33e-62 228
Msa0650070 MtrunA17_Chr4g0069141 39.011 364 185 11 425 771 144 487 6.89e-57 212
Msa0650070 MtrunA17_Chr2g0327581 37.709 358 204 8 425 771 39 388 9.39e-57 211
Msa0650070 MtrunA17_Chr1g0182151 38.793 348 196 8 434 771 54 394 1.73e-56 209
Msa0650070 MtrunA17_Chr2g0322291 39.722 360 170 10 434 771 88 422 4.65e-56 209
Msa0650070 MtrunA17_Chr7g0266631 37.535 357 192 10 434 771 9 353 6.17e-56 208
Msa0650070 MtrunA17_Chr1g0178411 37.921 356 192 10 434 771 13 357 1.54e-55 207
Msa0650070 MtrunA17_Chr3g0122121 37.190 363 178 12 435 773 99 435 1.35e-54 204
Msa0650070 MtrunA17_Chr8g0377731 36.745 381 183 12 420 773 40 389 2.14e-53 201
Msa0650070 MtrunA17_Chr8g0367581 36.364 363 205 5 421 783 133 469 3.39e-53 200
Msa0650070 MtrunA17_Chr1g0193221 36.286 350 180 9 435 771 4 323 1.38e-52 198
Msa0650070 MtrunA17_Chr3g0132921 37.624 303 176 7 479 771 46 345 4.28e-51 187
Msa0650070 MtrunA17_Chr5g0427481 35.447 347 204 8 435 771 18 354 5.36e-50 191
Msa0650070 MtrunA17_Chr4g0053211 35.792 366 198 12 434 771 12 368 8.61e-50 189
Msa0650070 MtrunA17_Chr3g0134191 37.466 363 190 11 435 771 9 360 1.24e-49 189
Msa0650070 MtrunA17_Chr1g0153061 36.288 361 197 11 435 771 9 360 8.23e-49 186
Msa0650070 MtrunA17_Chr1g0152231 35.457 361 175 9 435 771 4 330 5.72e-48 182
Msa0650070 MtrunA17_Chr7g0269681 50.000 172 86 0 614 785 33 204 3.14e-47 175
Msa0650070 MtrunA17_Chr8g0386891 51.515 165 80 0 622 786 4 168 5.22e-47 173
Msa0650070 MtrunA17_Chr2g0307481 35.942 345 191 9 435 770 69 392 1.57e-46 176
Msa0650070 MtrunA17_Chr4g0062291 37.500 296 160 7 481 771 176 451 3.41e-44 170
Msa0650070 MtrunA17_Chr6g0484501 50.867 173 85 0 614 786 26 198 9.43e-44 158
Msa0650070 MtrunA17_Chr5g0398521 32.791 369 203 11 431 775 54 401 1.75e-43 169
Msa0650070 MtrunA17_Chr4g0035661 37.134 307 168 8 480 782 129 414 3.30e-42 166
Msa0650070 MtrunA17_Chr7g0245931 33.424 368 201 11 431 775 49 395 6.99e-42 164
Msa0650070 MtrunA17_Chr3g0101021 35.783 313 164 7 481 771 108 405 5.39e-41 162
Msa0650070 MtrunA17_Chr3g0145071 36.808 307 169 8 480 782 139 424 6.85e-41 162
Msa0650070 MtrunA17_Chr6g0483701 35.216 301 165 6 477 771 73 349 1.25e-40 161
Msa0650070 MtrunA17_Chr5g0445211 33.784 370 190 10 427 771 67 406 2.95e-40 160
Msa0650070 MtrunA17_Chr8g0390991 52.830 159 75 0 622 780 4 162 8.18e-40 155
Msa0650070 MtrunA17_Chr6g0485471 34.270 356 201 8 435 782 116 446 9.13e-40 156
Msa0650070 MtrunA17_Chr4g0036001 33.242 364 206 9 415 768 4 340 2.43e-39 157
Msa0650070 MtrunA17_Chr7g0238581 33.815 346 195 11 435 770 26 347 2.68e-39 155
Msa0650070 MtrunA17_Chr2g0295881 34.316 373 190 14 435 781 198 541 1.15e-38 154
Msa0650070 MtrunA17_Chr7g0258991 33.711 353 197 10 432 776 71 394 1.70e-38 154
Msa0650070 MtrunA17_Chr2g0331761 34.473 351 197 10 435 777 186 511 3.39e-38 152
Msa0650070 MtrunA17_Chr4g0070001 33.152 368 205 11 419 776 125 461 4.66e-38 153
Msa0650070 MtrunA17_Chr5g0405181 35.216 301 155 8 480 769 68 339 6.52e-38 152
Msa0650070 MtrunA17_Chr8g0372171 34.884 301 156 8 480 769 67 338 1.02e-37 152
Msa0650070 MtrunA17_Chr3g0142261 32.471 348 192 9 435 769 20 337 5.31e-37 150
Msa0650070 MtrunA17_Chr4g0067421 31.707 369 203 8 435 781 206 547 1.82e-36 147
Msa0650070 MtrunA17_Chr8g0386901 35.608 337 178 12 259 584 324 632 2.40e-35 143
Msa0650070 MtrunA17_Chr6g0484511 44.134 179 88 6 412 586 269 439 1.53e-33 135
Msa0650070 MtrunA17_Chr8g0390981 47.929 169 78 5 422 586 503 665 2.11e-33 137
Msa0650070 MtrunA17_Chr7g0269691 44.910 167 81 6 422 584 388 547 3.14e-33 135
Msa0650070 MtrunA17_Chr1g0187411 30.028 363 195 13 460 788 147 484 2.54e-30 128
Msa0650070 MtrunA17_Chr3g0142841 29.371 286 150 11 483 749 145 397 1.55e-17 87.8
Msa0650070 MtrunA17_Chr6g0470541 26.263 297 189 8 481 775 51 319 6.80e-17 85.5
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0650070 AT5G54670.1 64.032 759 252 4 42 793 8 752 0.0 990
Msa0650070 AT5G54670.2 64.032 759 252 4 42 793 8 752 0.0 990
Msa0650070 AT4G27180.1 62.827 764 252 5 38 793 4 743 0.0 961
Msa0650070 AT4G27180.2 62.827 764 252 5 38 793 4 743 0.0 961
Msa0650070 AT4G21270.1 61.015 808 285 9 1 794 1 792 0.0 941
Msa0650070 AT4G05190.1 59.876 805 296 7 1 794 1 789 0.0 920
Msa0650070 AT4G05190.2 61.719 768 273 6 38 794 19 776 0.0 917
Msa0650070 AT5G54670.3 64.103 702 231 4 99 793 5 692 0.0 916
Msa0650070 AT1G72250.2 45.882 425 204 10 360 782 434 834 3.93e-98 331
Msa0650070 AT1G72250.4 45.647 425 205 9 360 782 445 845 4.90e-98 330
Msa0650070 AT1G72250.3 45.647 425 205 9 360 782 446 846 5.06e-98 330
Msa0650070 AT1G72250.1 44.762 420 203 8 376 782 422 825 9.61e-98 330
Msa0650070 AT5G27550.2 43.026 423 219 6 363 784 65 466 1.69e-94 312
Msa0650070 AT5G27550.1 43.026 423 219 6 363 784 65 466 1.69e-94 312
Msa0650070 AT2G22610.1 45.078 386 192 5 400 784 383 749 3.87e-93 315
Msa0650070 AT2G22610.3 45.078 386 192 5 400 784 384 750 4.38e-93 315
Msa0650070 AT2G22610.2 45.078 386 192 5 400 784 383 749 4.41e-93 315
Msa0650070 AT1G63640.5 38.550 524 247 15 311 786 306 802 4.90e-91 309
Msa0650070 AT1G63640.1 38.550 524 247 15 311 786 316 812 5.85e-91 309
Msa0650070 AT1G63640.4 38.550 524 247 15 311 786 316 812 5.85e-91 309
Msa0650070 AT1G63640.3 38.550 524 247 15 311 786 316 812 6.11e-91 309
Msa0650070 AT1G09170.4 45.304 362 178 7 422 780 422 766 5.24e-90 302
Msa0650070 AT1G09170.3 45.304 362 178 7 422 780 422 766 9.75e-90 300
Msa0650070 AT1G09170.7 45.304 362 178 7 422 780 422 766 9.75e-90 300
Msa0650070 AT1G73860.2 37.190 605 313 18 209 786 203 767 1.22e-89 303
Msa0650070 AT1G09170.2 45.304 362 178 7 422 780 422 766 2.28e-89 301
Msa0650070 AT1G63640.2 37.977 524 243 15 311 786 316 805 7.83e-89 303
Msa0650070 AT1G73860.1 37.190 605 313 18 209 786 286 850 1.03e-88 302
Msa0650070 AT1G09170.5 45.304 362 178 7 422 780 422 766 1.25e-88 302
Msa0650070 AT2G47500.2 45.879 364 172 7 422 780 387 730 1.04e-87 298
Msa0650070 AT2G47500.1 45.879 364 172 7 422 780 387 730 2.35e-87 297
Msa0650070 AT5G41310.1 44.504 373 161 6 422 786 410 744 9.18e-87 295
Msa0650070 AT1G18410.5 36.724 580 288 15 235 786 283 811 5.57e-85 291
Msa0650070 AT5G27000.1 44.444 360 185 4 422 780 382 727 6.47e-85 291
Msa0650070 AT1G18410.3 36.897 580 295 16 235 786 293 829 9.81e-85 291
Msa0650070 AT1G18410.2 36.897 580 295 16 235 786 293 829 9.81e-85 291
Msa0650070 AT3G44730.1 39.958 473 211 17 329 780 291 711 3.56e-84 290
Msa0650070 AT3G44730.4 39.958 473 211 17 329 780 291 711 3.56e-84 290
Msa0650070 AT3G44730.2 40.127 471 213 16 329 780 336 756 3.84e-84 291
Msa0650070 AT3G44730.3 40.127 471 213 16 329 780 336 756 3.84e-84 291
Msa0650070 AT1G18410.1 36.724 580 288 15 235 786 436 964 1.05e-83 290
Msa0650070 AT1G18410.4 36.897 580 295 16 235 786 436 972 1.35e-83 290
Msa0650070 AT3G10310.1 43.817 372 186 11 412 780 344 695 6.49e-81 279
Msa0650070 AT3G10310.2 43.817 372 186 11 412 780 344 695 8.72e-81 279
Msa0650070 AT5G27950.1 40.299 402 214 8 379 775 25 405 7.29e-76 258
Msa0650070 AT5G65930.1 32.201 677 366 19 103 771 614 1205 1.53e-75 267
Msa0650070 AT5G65930.2 32.201 677 366 19 103 771 615 1206 1.58e-75 267
Msa0650070 AT5G65930.3 32.201 677 366 19 103 771 621 1212 2.64e-75 267
Msa0650070 AT1G09170.6 45.031 322 157 7 422 740 422 726 5.65e-75 259
Msa0650070 AT1G09170.8 45.031 322 157 7 422 740 422 726 5.65e-75 259
Msa0650070 AT1G09170.1 40.608 362 159 6 422 780 422 730 8.94e-74 260
Msa0650070 AT1G55550.1 39.167 360 197 7 419 777 76 414 1.71e-72 254
Msa0650070 AT3G19050.1 41.408 355 171 12 434 771 193 527 2.56e-63 232
Msa0650070 AT3G17360.2 38.983 354 181 10 434 771 168 502 1.53e-58 218
Msa0650070 AT3G17360.1 38.983 354 181 10 434 771 168 502 1.58e-58 218
Msa0650070 AT3G17360.3 38.983 354 181 10 434 771 168 502 1.72e-58 217
Msa0650070 AT2G36200.1 38.333 360 185 9 434 771 12 356 3.01e-58 215
Msa0650070 AT2G36200.2 38.333 360 185 9 434 771 12 356 5.22e-58 214
Msa0650070 AT3G45850.2 37.746 355 189 10 434 771 55 394 6.56e-57 211
Msa0650070 AT3G45850.1 37.746 355 189 10 434 771 55 394 6.56e-57 211
Msa0650070 AT3G44050.1 40.113 354 177 10 434 771 93 427 1.48e-56 211
Msa0650070 AT2G37420.1 37.892 351 194 10 434 771 48 387 5.14e-56 209
Msa0650070 AT2G37420.2 37.892 351 194 10 434 771 48 387 5.14e-56 209
Msa0650070 AT2G28620.3 36.620 355 193 9 434 771 50 389 1.21e-55 207
Msa0650070 AT2G28620.2 36.620 355 193 9 434 771 50 389 1.21e-55 207
Msa0650070 AT2G28620.1 36.620 355 193 9 434 771 50 389 1.32e-55 207
Msa0650070 AT5G65460.2 35.613 351 200 5 421 771 125 449 3.28e-54 203
Msa0650070 AT5G65460.6 35.613 351 200 5 421 771 125 449 3.88e-54 203
Msa0650070 AT5G65460.1 35.613 351 200 5 421 771 125 449 5.06e-54 203
Msa0650070 AT5G65460.4 35.613 351 200 5 421 771 125 449 5.66e-54 203
Msa0650070 AT5G65460.3 35.211 355 203 5 421 771 125 456 1.72e-53 201
Msa0650070 AT4G14150.1 36.011 361 182 10 435 773 92 425 6.22e-53 200
Msa0650070 AT3G50240.2 37.637 364 188 10 435 771 26 377 9.22e-53 198
Msa0650070 AT3G50240.1 37.637 364 188 10 435 771 26 377 1.86e-52 198
Msa0650070 AT3G23670.2 38.438 320 156 8 478 773 128 430 1.88e-52 197
Msa0650070 AT3G50240.4 37.637 364 188 10 435 771 26 377 2.31e-52 197
Msa0650070 AT3G23670.1 38.438 320 156 8 478 773 128 430 3.08e-52 198
Msa0650070 AT5G10470.1 35.694 353 197 7 421 771 129 453 3.71e-52 197
Msa0650070 AT5G10470.2 35.694 353 197 7 421 771 129 453 3.85e-52 197
Msa0650070 AT3G10180.1 35.429 350 184 7 435 771 4 324 1.36e-51 196
Msa0650070 AT3G10180.2 35.429 350 184 7 435 771 4 324 1.50e-51 196
Msa0650070 AT5G47820.2 36.785 367 193 13 434 771 11 367 1.13e-50 192
Msa0650070 AT5G47820.1 36.785 367 193 13 434 771 11 367 1.13e-50 192
Msa0650070 AT3G63480.2 36.639 363 188 15 434 780 3 339 1.45e-48 179
Msa0650070 AT3G63480.1 37.190 363 190 17 434 780 3 343 1.64e-48 179
Msa0650070 AT1G59540.1 36.443 343 186 10 435 770 4 321 4.75e-48 183
Msa0650070 AT5G60930.1 36.164 318 175 9 479 771 43 357 4.69e-46 179
Msa0650070 AT5G60930.3 36.164 318 175 9 479 771 43 357 4.84e-46 179
Msa0650070 AT5G60930.2 36.164 318 175 9 479 771 43 357 6.55e-46 178
Msa0650070 AT1G18550.1 36.949 295 162 7 481 771 204 478 1.40e-44 172
Msa0650070 AT1G12430.1 32.249 369 196 12 435 775 71 413 2.50e-43 169
Msa0650070 AT1G12430.2 32.249 369 196 12 435 775 71 413 2.58e-43 169
Msa0650070 AT3G54870.2 34.603 315 168 9 475 771 144 438 5.56e-43 169
Msa0650070 AT3G54870.1 34.603 315 168 9 475 771 144 438 6.75e-43 168
Msa0650070 AT3G54870.3 34.603 315 168 9 475 771 144 438 7.71e-43 168
Msa0650070 AT3G50240.3 39.350 277 139 6 520 771 3 275 1.05e-42 167
Msa0650070 AT2G21380.2 38.436 307 160 9 480 780 144 427 1.61e-42 167
Msa0650070 AT2G21380.1 38.436 307 160 9 480 780 144 427 1.61e-42 167
Msa0650070 AT4G39050.1 34.771 371 207 11 418 782 82 423 2.88e-42 167
Msa0650070 AT1G01950.2 32.703 370 201 12 431 775 57 403 3.41e-42 166
Msa0650070 AT5G06670.2 34.746 354 198 10 429 776 61 387 3.86e-42 166
Msa0650070 AT5G06670.3 34.746 354 198 10 429 776 61 387 3.86e-42 166
Msa0650070 AT1G01950.1 32.703 370 201 12 431 775 57 403 3.91e-42 166
Msa0650070 AT1G01950.3 32.703 370 201 12 431 775 57 403 4.43e-42 166
Msa0650070 AT5G06670.8 34.746 354 198 10 429 776 61 387 6.70e-42 164
Msa0650070 AT5G06670.4 34.746 354 198 10 429 776 61 387 6.70e-42 164
Msa0650070 AT5G06670.7 34.746 354 198 10 429 776 61 387 6.70e-42 164
Msa0650070 AT5G06670.5 34.746 354 198 10 429 776 61 387 7.12e-42 164
Msa0650070 AT3G49650.1 36.306 314 175 7 470 778 54 347 2.93e-41 162
Msa0650070 AT5G27950.2 39.592 245 137 4 534 775 3 239 3.14e-41 157
Msa0650070 AT5G06670.6 34.160 363 197 11 429 776 61 396 1.04e-40 162
Msa0650070 AT5G06670.1 34.160 363 197 11 429 776 61 396 1.04e-40 162
Msa0650070 AT1G21730.1 34.734 357 200 11 430 780 71 400 1.91e-40 160
Msa0650070 AT1G18370.1 36.242 298 160 8 480 771 77 350 4.68e-40 159
Msa0650070 AT3G12020.4 33.333 351 201 9 432 776 67 390 2.11e-39 157
Msa0650070 AT3G12020.1 33.333 351 201 9 432 776 67 390 2.11e-39 157
Msa0650070 AT3G12020.3 33.333 351 201 9 432 776 67 390 3.69e-39 157
Msa0650070 AT3G12020.2 33.333 351 201 9 432 776 67 390 3.69e-39 157
Msa0650070 AT3G16060.1 33.903 351 199 7 435 777 170 495 7.28e-39 154
Msa0650070 AT3G43210.3 37.415 294 153 7 481 768 74 342 1.52e-38 155
Msa0650070 AT3G43210.5 37.415 294 153 7 481 768 74 342 1.52e-38 155
Msa0650070 AT3G43210.2 37.415 294 153 7 481 768 74 342 1.52e-38 155
Msa0650070 AT3G43210.4 37.415 294 153 7 481 768 74 342 1.52e-38 155
Msa0650070 AT3G43210.1 37.415 294 153 7 481 768 74 342 1.52e-38 155
Msa0650070 AT3G51150.1 35.880 301 153 8 480 769 65 336 3.33e-38 154
Msa0650070 AT3G51150.2 35.880 301 153 8 480 769 65 336 3.42e-38 154
Msa0650070 AT3G51150.4 35.880 301 153 8 480 769 65 336 3.42e-38 154
Msa0650070 AT3G51150.3 35.880 301 153 8 480 769 65 336 3.42e-38 154
Msa0650070 AT4G38950.3 34.122 296 163 6 480 768 59 329 7.42e-38 152
Msa0650070 AT4G38950.5 34.122 296 163 6 480 768 59 329 7.42e-38 152
Msa0650070 AT4G38950.4 34.122 296 163 6 480 768 59 329 7.42e-38 152
Msa0650070 AT4G38950.1 34.122 296 163 6 480 768 59 329 7.42e-38 152
Msa0650070 AT4G38950.2 34.122 296 163 6 480 768 59 329 7.42e-38 152
Msa0650070 AT5G66310.2 35.354 297 160 7 480 769 66 337 1.08e-36 149
Msa0650070 AT5G66310.3 35.354 297 160 7 480 769 66 337 1.08e-36 149
Msa0650070 AT5G66310.1 35.354 297 160 7 480 769 66 337 1.08e-36 149
Msa0650070 AT4G24170.1 35.762 302 157 8 478 769 47 321 1.34e-36 149
Msa0650070 AT4G24170.2 35.762 302 157 8 478 769 47 321 1.34e-36 149
Msa0650070 AT5G02370.1 31.534 352 191 12 434 770 20 336 2.02e-36 145
Msa0650070 AT3G20150.1 33.016 315 174 8 481 773 136 435 3.19e-36 148
Msa0650070 AT3G20150.2 33.016 315 174 8 481 773 136 435 3.99e-36 147
Msa0650070 AT3G16630.2 31.653 357 197 7 435 771 194 523 1.63e-35 145
Msa0650070 AT3G16630.1 31.653 357 197 7 435 771 194 523 1.63e-35 145
Msa0650070 AT1G59540.2 36.981 265 142 6 534 792 3 248 1.12e-34 142
Msa0650070 AT2G21300.2 33.557 298 162 8 480 768 70 340 1.47e-34 142
Msa0650070 AT2G21300.4 33.557 298 162 8 480 768 70 340 1.47e-34 142
Msa0650070 AT2G21300.3 33.557 298 162 8 480 768 70 340 1.47e-34 142
Msa0650070 AT2G21300.1 33.557 298 162 8 480 768 70 340 1.47e-34 142
Msa0650070 AT2G21300.5 33.557 298 162 8 480 768 70 340 1.47e-34 142
Msa0650070 AT4G14330.1 31.476 359 210 14 443 785 42 380 4.11e-33 137
Msa0650070 AT1G01950.4 34.276 283 142 9 516 775 1 262 1.06e-32 135
Msa0650070 AT5G42490.1 34.836 244 127 8 480 717 55 272 5.30e-24 108
Msa0650070 AT5G42490.2 34.836 244 127 8 480 717 55 272 5.66e-24 108
Msa0650070 AT5G65460.5 33.014 209 121 3 562 770 13 202 3.33e-23 106
Msa0650070 AT3G51150.5 41.975 162 77 4 618 769 29 183 1.09e-21 101
Msa0650070 AT5G23910.2 27.097 310 191 11 476 784 54 329 2.14e-16 84.0
Msa0650070 AT5G23910.1 27.097 310 191 11 476 784 50 325 2.75e-16 84.0
Msa0650070 AT1G20060.6 28.873 284 164 8 483 751 165 425 5.87e-14 76.6
Msa0650070 AT1G20060.8 28.873 284 164 8 483 751 165 425 6.01e-14 76.6
Msa0650070 AT1G20060.4 28.873 284 164 8 483 751 165 425 6.16e-14 76.6
Msa0650070 AT1G20060.10 28.873 284 164 8 483 751 165 425 6.18e-14 76.6
Msa0650070 AT1G20060.5 28.873 284 164 8 483 751 165 425 6.28e-14 76.6
Msa0650070 AT1G20060.9 28.873 284 164 8 483 751 165 425 6.39e-14 76.3
Msa0650070 AT1G20060.2 28.873 284 164 8 483 751 165 425 6.56e-14 76.3
Msa0650070 AT1G20060.7 28.873 284 164 8 483 751 165 425 6.61e-14 76.3
Msa0650070 AT1G20060.3 28.873 284 164 8 483 751 165 425 6.74e-14 76.3

Find 151 sgRNAs with CRISPR-Local

Find 274 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TCACAAGAGATATACCATTT+TGG 0.187916 4_3:+56814044 None:intergenic
AAAATTACACAATACCATTT+TGG 0.194447 4_3:-56814274 Msa0650070:intron
GAAAGAAAGGTTTAATTATA+AGG 0.248971 4_3:-56816590 Msa0650070:intron
ACAATCAAACATGACGTAAA+TGG 0.257325 4_3:-56813242 Msa0650070:CDS
TGCCTTATTCTTCCATTATA+CGG 0.258283 4_3:+56816748 None:intergenic
CCTGGACATCCTGATGAAAA+AGG 0.267155 4_3:-56813555 Msa0650070:CDS
CCAGAAGTTTCCATTGATAA+TGG 0.291607 4_3:+56814085 None:intergenic
GTGTTCACTCTTCGAATATA+TGG 0.292968 4_3:-56812842 Msa0650070:CDS
TTAGGAAAGATGTGAAAATA+TGG 0.299763 4_3:-56816109 Msa0650070:intron
GGTTCAATGAATTACCAAAA+TGG 0.302426 4_3:+56814260 None:intergenic
CAAATTTAAAAGAATGCTTC+TGG 0.303819 4_3:+56813921 None:intergenic
ATATGGTGGATTATATAAAA+AGG 0.309229 4_3:-56816092 Msa0650070:CDS
AGTAATGCTGGATCGGATTA+TGG 0.312596 4_3:-56816670 Msa0650070:CDS
AGGAAGATCATGTGCCATTC+AGG 0.324338 4_3:-56812429 Msa0650070:CDS
AGAGTAAATGCTTGTGAGAT+TGG 0.335718 4_3:-56812157 Msa0650070:CDS
TGGCACATGATCTTCCTTCT+TGG 0.336040 4_3:+56812435 None:intergenic
CCATTATCAATGGAAACTTC+TGG 0.339393 4_3:-56814085 Msa0650070:CDS
AAGATCATCCTTCTGCTTTG+TGG 0.340847 4_3:+56814911 None:intergenic
TTGATTGTGTATTGCTTTCC+AGG 0.340915 4_3:+56813257 None:intergenic
TCAGAATATAAACTTATAGA+AGG 0.341562 4_3:-56814312 Msa0650070:CDS
TTTACAAGAGAAATTGATAA+AGG 0.345900 4_3:-56815777 Msa0650070:CDS
AAGTGCTCTTGATGGTTATA+AGG 0.346220 4_3:-56813834 Msa0650070:intron
GATGTATCACGCGTGGAAAA+TGG 0.352045 4_3:-56813284 Msa0650070:CDS
GGAGAACTCTTGCATTGAAT+TGG 0.352306 4_3:-56814772 Msa0650070:CDS
GCCTATGGTCAAACAGGATC+AGG 0.373014 4_3:-56813603 Msa0650070:CDS
ATCTTTGCCTATGGTCAAAC+AGG 0.382932 4_3:-56813609 Msa0650070:CDS
TCATGAAACTAAAAGAATCT+AGG 0.388183 4_3:-56814794 Msa0650070:CDS
CTTGTACAAAGTGCTCTTGA+TGG 0.389788 4_3:-56813842 Msa0650070:CDS
CTCCGTATAATGGAAGAATA+AGG 0.396977 4_3:-56816750 Msa0650070:CDS
CGCTCAATGAAATGTATAAA+CGG 0.398104 4_3:-56815389 Msa0650070:CDS
AGGTCTTCCCATCATTGTAT+AGG 0.402460 4_3:+56813575 None:intergenic
TCAGAACACCTTGTACTTGT+TGG 0.402581 4_3:+56812675 None:intergenic
CATATCACCTGATCCTTCTT+CGG 0.408441 4_3:-56812215 Msa0650070:CDS
GGAATTGACCTAGCCCAAAA+TGG 0.409411 4_3:-56814058 Msa0650070:intron
CTGAATCTAATTGACCTTGC+TGG 0.411776 4_3:-56812656 Msa0650070:CDS
TTCTCTTGTATAAATTGAAA+AGG 0.414560 4_3:-56811863 Msa0650070:three_prime_UTR
TTGAAGCAGAATCTCTCAAC+TGG 0.418775 4_3:+56817021 None:intergenic
CGCGTGGAAAATGGTACTCC+TGG 0.426949 4_3:-56813275 Msa0650070:CDS
AGTAGCTCGTCTCCAGGTCT+TGG 0.431526 4_3:+56816046 None:intergenic
ATACCTGAGTTTCTCTCAAC+CGG 0.433179 4_3:+56812597 None:intergenic
TAGGTTTGCATCTTTGCCTA+TGG 0.434502 4_3:-56813618 Msa0650070:CDS
ATTGAAAGAGAATCAAATAA+AGG 0.441172 4_3:-56814622 Msa0650070:CDS
AACAAATTGAACTATTAGAA+TGG 0.449805 4_3:+56811921 None:intergenic
TTGAGAGATTCTGCTTCAAA+TGG 0.452190 4_3:-56817017 Msa0650070:exon
GATGTGTGTGTGAGTGATAA+TGG 0.455909 4_3:+56816971 None:intergenic
ATTCAGTTATCCATTATCAA+TGG 0.455935 4_3:-56814095 Msa0650070:CDS
GACATTAAAAGCAAGTGAAC+TGG 0.455991 4_3:-56814742 Msa0650070:CDS
AGCTGCAGAGAAGAAATTGC+AGG 0.462996 4_3:-56814580 Msa0650070:intron
ATGATTAAACAGCCTTGTCT+TGG 0.465469 4_3:-56812268 Msa0650070:intron
TTTGCGCTTGAGATAATTGA+CGG 0.466217 4_3:+56814832 None:intergenic
TATCAGATGGTTCCAAGACC+TGG 0.467725 4_3:-56816058 Msa0650070:CDS
CTTTCAAAGAGTGGTTCAAC+CGG 0.471546 4_3:-56812623 Msa0650070:CDS
AGAGATGCTGCTTAAAATCA+AGG 0.476914 4_3:-56815849 Msa0650070:CDS
ATGGTGGAGACTCCGTATAA+TGG 0.477995 4_3:-56816760 Msa0650070:CDS
TTAAACAGCCTTGTCTTGGC+GGG 0.484406 4_3:-56812264 Msa0650070:intron
CCCTGATCCTGTTTGACCAT+AGG 0.486954 4_3:+56813602 None:intergenic
TCTGTGCTACGACTTTCATC+TGG 0.487126 4_3:+56814127 None:intergenic
AGGGAAAACCTATACAATGA+TGG 0.487535 4_3:-56813583 Msa0650070:CDS
TAAATCAAGCTGCAAATAGC+AGG 0.488065 4_3:-56813154 Msa0650070:intron
AGTGCTCCTCCGAGTAATGC+TGG 0.490602 4_3:-56816682 Msa0650070:CDS
TTAATAGTCTTCTCAAGAAG+AGG 0.493160 4_3:-56814934 Msa0650070:intron
GAGAACATCGCCATGCTAAA+GGG 0.497657 4_3:-56815255 Msa0650070:CDS
GGCTCAAGGTTTGTATCAGA+TGG 0.498285 4_3:-56816071 Msa0650070:CDS
TCTCCACCATTGTTTCTAGC+AGG 0.498530 4_3:+56816773 None:intergenic
AGTCTCAACAACCTCAAGGC+TGG 0.498705 4_3:-56813491 Msa0650070:CDS
CATGAAACTAAAAGAATCTA+GGG 0.501905 4_3:-56814793 Msa0650070:CDS
GGAGAACATCGCCATGCTAA+AGG 0.503104 4_3:-56815256 Msa0650070:CDS
CATATTTGCCTTGGCCAAGA+AGG 0.504143 4_3:-56812449 Msa0650070:CDS
GTAAGCTTTGAGTTCCTGAA+TGG 0.504300 4_3:+56812415 None:intergenic
AGAAAAGAGGGTACCTCTGA+AGG 0.504818 4_3:+56816941 None:intergenic
CTTTAACAGTTGTGAATGGC+GGG 0.505806 4_3:-56816723 Msa0650070:CDS
TGGTTACCAAAATTCAAAAC+CGG 0.508924 4_3:-56816997 Msa0650070:CDS
AGTTTCTCTCAACCGGTCAC+CGG 0.509568 4_3:+56812604 None:intergenic
TCACCTGATCCTTCTTCGGT+TGG 0.511165 4_3:-56812211 Msa0650070:CDS
AGTGACTCGCCAACCGAAGA+AGG 0.511481 4_3:+56812202 None:intergenic
TCGCCAACCGAAGAAGGATC+AGG 0.514072 4_3:+56812208 None:intergenic
ATTAAACAGCCTTGTCTTGG+CGG 0.514238 4_3:-56812265 Msa0650070:intron
ATGCACTTGACTGCTACAAA+TGG 0.519825 4_3:+56812044 None:intergenic
ATGATCTTCCTTCTTGGCCA+AGG 0.523814 4_3:+56812441 None:intergenic
CAAGCTTTAACAGTTGTGAA+TGG 0.525226 4_3:-56816727 Msa0650070:CDS
CATTTACTCTAGAAGCAAAC+CGG 0.529939 4_3:+56812170 None:intergenic
CGACTTTCATCTGGCAACAA+AGG 0.530807 4_3:+56814136 None:intergenic
GGGAAAACCTATACAATGAT+GGG 0.535898 4_3:-56813582 Msa0650070:CDS
CAGAATATAAACTTATAGAA+GGG 0.536777 4_3:-56814311 Msa0650070:CDS
GGAAAGATGTGAAAATATGG+TGG 0.536845 4_3:-56816106 Msa0650070:CDS
GTGAATGGCGGGCACGATGT+TGG 0.538827 4_3:-56816712 Msa0650070:CDS
TGTAGATAATAAATCGCGAA+TGG 0.540795 4_3:+56813322 None:intergenic
AGAGTCAGTAGCGCGGCCAT+TGG 0.545473 4_3:+56812117 None:intergenic
CAAACGTGTAGAGAAAGAAA+AGG 0.546172 4_3:-56815289 Msa0650070:CDS
GAGGGTACCTCTGAAGGGGT+TGG 0.550883 4_3:+56816947 None:intergenic
GCCTCACGCGACAGAATACA+CGG 0.553941 4_3:+56814158 None:intergenic
GAAAAGAGGGTACCTCTGAA+GGG 0.554971 4_3:+56816942 None:intergenic
GAGACAAGGACAGAATTTGA+AGG 0.556299 4_3:-56814378 Msa0650070:CDS
TCCTCCGAGTAATGCTGGAT+CGG 0.557394 4_3:-56816677 Msa0650070:CDS
GAGTGATGTCATATTTGCCT+TGG 0.561542 4_3:-56812458 Msa0650070:CDS
AAAGGAAGAAGCAGAGAAGT+CGG 0.562965 4_3:-56815759 Msa0650070:intron
CTATTGAGTAGCTCGTCTCC+AGG 0.563163 4_3:+56816040 None:intergenic
TGTTTCTGATCTTACAGTAG+TGG 0.564567 4_3:-56813210 Msa0650070:CDS
TCGAATATATGGTGTAAATG+AGG 0.566475 4_3:-56812831 Msa0650070:intron
AGAGTGGTTCAACCGGTGAC+CGG 0.567009 4_3:-56812616 Msa0650070:CDS
ATCTACAAACAGATCATCAT+CGG 0.569372 4_3:-56813306 Msa0650070:CDS
GCTGCTTAAAATCAAGGAAG+AGG 0.570111 4_3:-56815843 Msa0650070:CDS
TTTATACATTTCATTGAGCG+AGG 0.570583 4_3:+56815392 None:intergenic
AGGCTGGAAATACGAAATGC+AGG 0.571436 4_3:-56813475 Msa0650070:intron
AGTGAAGTTTATTCTATGAG+AGG 0.574758 4_3:-56814885 Msa0650070:CDS
AGCGAGCGTCTTTCAAAGAG+TGG 0.576346 4_3:-56812632 Msa0650070:CDS
TAAACAGCCTTGTCTTGGCG+GGG 0.576562 4_3:-56812263 Msa0650070:intron
AGAAGAGGCCACAAAGCAGA+AGG 0.576631 4_3:-56814919 Msa0650070:CDS
ATTTCGTATTTCCAGCCTTG+AGG 0.579367 4_3:+56813480 None:intergenic
TTGTAAATACAAGGCTGCAG+TGG 0.581447 4_3:-56815645 Msa0650070:intron
AGCACTGACCAACAAGTACA+AGG 0.583674 4_3:-56812683 Msa0650070:CDS
AGAATATAAACTTATAGAAG+GGG 0.584502 4_3:-56814310 Msa0650070:CDS
TAATCCGATCCAGCATTACT+CGG 0.584877 4_3:+56816673 None:intergenic
AGACAAGGACAGAATTTGAA+GGG 0.588012 4_3:-56814377 Msa0650070:CDS
ATAAACTTATAGAAGGGGAG+AGG 0.592107 4_3:-56814305 Msa0650070:CDS
CACATCTCCAACCCCTTCAG+AGG 0.594814 4_3:-56816954 Msa0650070:intron
GCTTTAACAGTTGTGAATGG+CGG 0.596409 4_3:-56816724 Msa0650070:CDS
TACTCGGAGGAGCACTACTT+AGG 0.596969 4_3:+56816689 None:intergenic
TTTGAGTCCCCGCCAAGACA+AGG 0.599113 4_3:+56812256 None:intergenic
TGACCGGTTGAGAGAAACTC+AGG 0.600341 4_3:-56812600 Msa0650070:intron
ACACCTCGTCGTCAGACCAA+TGG 0.603841 4_3:-56812133 Msa0650070:CDS
CCTATGGTCAAACAGGATCA+GGG 0.605281 4_3:-56813602 Msa0650070:CDS
AAGCAAGGCTTGATATTGAG+AGG 0.606395 4_3:-56815601 Msa0650070:CDS
GATTCAAAGTGCAAATCAGA+AGG 0.607548 4_3:-56815534 Msa0650070:intron
CGGCCATTGGTCTGACGACG+AGG 0.613765 4_3:+56812130 None:intergenic
GATGAAAGTCGTAGCACAGA+AGG 0.616359 4_3:-56814124 Msa0650070:CDS
AGTTTGATTAATTCTAACAA+CGG 0.617876 4_3:-56811992 Msa0650070:three_prime_UTR
TATACAATGATGGGAAGACC+TGG 0.618927 4_3:-56813573 Msa0650070:CDS
GAAAGAAAAGGCTACTGCAG+AGG 0.619356 4_3:-56815277 Msa0650070:CDS
AGTAAGTTGACCCTTTAGCA+TGG 0.622488 4_3:+56815245 None:intergenic
TCCGTGTATTCTGTCGCGTG+AGG 0.624664 4_3:-56814159 Msa0650070:CDS
GCGAGTCACTATGCTCACTC+CGG 0.627787 4_3:-56812189 Msa0650070:CDS
TCAATGGAAACTTCTGGACG+AGG 0.630866 4_3:-56814079 Msa0650070:CDS
ATTAAAAGCAAGTGAACTGG+AGG 0.633866 4_3:-56814739 Msa0650070:intron
ACTACTCTTTCCGAGGACCT+CGG 0.636188 4_3:-56815572 Msa0650070:CDS
AAAAGAGGGTACCTCTGAAG+GGG 0.638735 4_3:+56816943 None:intergenic
ACAAGTTTACAACAGTACAA+TGG 0.639259 4_3:-56815351 Msa0650070:CDS
TAAGCACCTGCTAGAAACAA+TGG 0.641863 4_3:-56816779 Msa0650070:CDS
GTGTGAGTGATAATGGAGGC+CGG 0.651317 4_3:+56816978 None:intergenic
ATCATCGGATGTATCACGCG+TGG 0.653768 4_3:-56813291 Msa0650070:CDS
GTCACATACTACTCTTTCCG+AGG 0.654450 4_3:-56815579 Msa0650070:CDS
AAACAGTCTCAACAACCTCA+AGG 0.655111 4_3:-56813495 Msa0650070:CDS
GACGAGCTACTCAATAGACC+AGG 0.656048 4_3:-56816034 Msa0650070:CDS
AAAGACGCTCGCTACCAGCA+AGG 0.659107 4_3:+56812642 None:intergenic
TTTCTAAAGAGAGAGAAGCA+AGG 0.661679 4_3:-56815616 Msa0650070:CDS
ATGTATCTGTATTCGAGACA+AGG 0.666554 4_3:-56814392 Msa0650070:CDS
AATATTTGTTCTAACGAACG+AGG 0.684845 4_3:+56813525 None:intergenic
GCACCTGCTAGAAACAATGG+TGG 0.685189 4_3:-56816776 Msa0650070:CDS
TCCGATCCAGCATTACTCGG+AGG 0.713746 4_3:+56816676 None:intergenic
TCAAACGAGAGTCAGTAGCG+CGG 0.759318 4_3:+56812110 None:intergenic
GTGTGTGTGAGTGATAATGG+AGG 0.786079 4_3:+56816974 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! ATATTTGAATTTGAAATTAA+AGG - chr4_3:56812423-56812442 Msa0650070:CDS 10.0%
!!! TATTTGAATTTGAAATTAAA+GGG - chr4_3:56812424-56812443 Msa0650070:CDS 10.0%
!!! ATTTTTTTCCAAAATTTAAA+AGG + chr4_3:56813222-56813241 None:intergenic 10.0%
!! ATATCTTTATTAGATTAAAA+TGG - chr4_3:56815881-56815900 Msa0650070:intron 10.0%
!!! ATTTGAATTTGAAATTAAAG+GGG - chr4_3:56812425-56812444 Msa0650070:CDS 15.0%
!!! TATATATTTACTTTTTAACC+AGG - chr4_3:56812665-56812684 Msa0650070:CDS 15.0%
!!! ATATATTTACTTTTTAACCA+GGG - chr4_3:56812666-56812685 Msa0650070:CDS 15.0%
!! TTGGAAAAAAATAATATGAA+AGG - chr4_3:56813230-56813249 Msa0650070:CDS 15.0%
!! AAAATATCTTTGTAAATACA+AGG - chr4_3:56813277-56813296 Msa0650070:CDS 15.0%
!! TAGTTATGATCTTATTAAAT+TGG - chr4_3:56814956-56814975 Msa0650070:intron 15.0%
!!! AAATATGATGTTTTCATTTT+AGG - chr4_3:56815294-56815313 Msa0650070:CDS 15.0%
!!! AACATAATTTGATATGATTT+TGG - chr4_3:56815921-56815940 Msa0650070:intron 15.0%
!!! TTTAATTGTATTGATTATTC+TGG - chr4_3:56816003-56816022 Msa0650070:CDS 15.0%
!! AAAAAAAAAAAAAAACACTG+TGG + chr4_3:56816366-56816385 None:intergenic 15.0%
!!! TATTTTGAAATGAGAAAAGA+GGG + chr4_3:56812005-56812024 None:intergenic 20.0%
!!! ATATTTTGAAATGAGAAAAG+AGG + chr4_3:56812006-56812025 None:intergenic 20.0%
!!! ATTAAACCTTTCTTTCTTTT+TGG + chr4_3:56812337-56812356 None:intergenic 20.0%
!! GAAAGAAAGGTTTAATTATA+AGG - chr4_3:56812341-56812360 Msa0650070:intron 20.0%
!! CTATATAGCATTTAAACTTA+AGG + chr4_3:56812393-56812412 None:intergenic 20.0%
!! AATATCAAGTTCAATGTATA+TGG - chr4_3:56812450-56812469 Msa0650070:CDS 20.0%
!!! TAACTTGTGTTTAAATACTA+CGG + chr4_3:56812543-56812562 None:intergenic 20.0%
!! CTTTCTGTTATTCAAATTTA+GGG + chr4_3:56812569-56812588 None:intergenic 20.0%
!!! AAATCGTTTTTCTTATTCAA+AGG + chr4_3:56812782-56812801 None:intergenic 20.0%
!!! TGTAACTCTTTATGTTTTTT+AGG - chr4_3:56812804-56812823 Msa0650070:intron 20.0%
!!! ATATGGTGGATTATATAAAA+AGG - chr4_3:56812839-56812858 Msa0650070:CDS 20.0%
!!! AAGCAAAAAAGTATAGAAAT+CGG - chr4_3:56812949-56812968 Msa0650070:intron 20.0%
!! ATAAATAAATCTAGGCATAT+TGG + chr4_3:56813046-56813065 None:intergenic 20.0%
!! TTTACAAGAGAAATTGATAA+AGG - chr4_3:56813154-56813173 Msa0650070:intron 20.0%
!!! TTTTCAAAGCTTATTATGAT+TGG + chr4_3:56813261-56813280 None:intergenic 20.0%
!! TTAATTATTGTCTTCATTGA+TGG - chr4_3:56813502-56813521 Msa0650070:CDS 20.0%
!! TCAATTAAGTTCAATAACTT+AGG + chr4_3:56813907-56813926 None:intergenic 20.0%
!! AAGGAAATTGAATAATATAC+CGG + chr4_3:56813970-56813989 None:intergenic 20.0%
!! ATATTTAATAGAAGGAAATC+AGG + chr4_3:56814230-56814249 None:intergenic 20.0%
!! ATAGTGTGATATTTAATAGA+AGG + chr4_3:56814238-56814257 None:intergenic 20.0%
!! ATTGAAAGAGAATCAAATAA+AGG - chr4_3:56814309-56814328 Msa0650070:CDS 20.0%
!!! CAACATGATAATGATAATAA+TGG + chr4_3:56814488-56814507 None:intergenic 20.0%
!! TCAGAATATAAACTTATAGA+AGG - chr4_3:56814619-56814638 Msa0650070:CDS 20.0%
!! CAGAATATAAACTTATAGAA+GGG - chr4_3:56814620-56814639 Msa0650070:CDS 20.0%
!! AGAATATAAACTTATAGAAG+GGG - chr4_3:56814621-56814640 Msa0650070:CDS 20.0%
!!! AAAATTACACAATACCATTT+TGG - chr4_3:56814657-56814676 Msa0650070:intron 20.0%
!! CTTATAATCAACAAATCTTT+CGG + chr4_3:56814695-56814714 None:intergenic 20.0%
!! AAAACTGAGATTGTTTAATA+AGG + chr4_3:56814731-56814750 None:intergenic 20.0%
!!! TCATTTTTTACATTTTTCCT+TGG - chr4_3:56815152-56815171 Msa0650070:intron 20.0%
!! ATCTATTAATGCTACATATA+AGG - chr4_3:56815190-56815209 Msa0650070:intron 20.0%
!! TATTTCAGAATAAATCCAAA+TGG + chr4_3:56815279-56815298 None:intergenic 20.0%
!!! GTTCTTGTTATAAAATTTTC+AGG - chr4_3:56815559-56815578 Msa0650070:CDS 20.0%
!! TTCATTTATCATTTGTAATC+AGG - chr4_3:56816425-56816444 Msa0650070:intron 20.0%
!!! ACTCATTTTCATTTTTATTG+TGG + chr4_3:56816922-56816941 None:intergenic 20.0%
!! AGTTTGATTAATTCTAACAA+CGG - chr4_3:56816939-56816958 Msa0650070:intron 20.0%
!! AACAAATTGAACTATTAGAA+TGG + chr4_3:56817013-56817032 None:intergenic 20.0%
!! TTCTCTTGTATAAATTGAAA+AGG - chr4_3:56817068-56817087 Msa0650070:intron 20.0%
!! ATTCACCTCATTTTAAATTC+TGG - chr4_3:56812037-56812056 Msa0650070:three_prime_UTR 25.0%
!! TTCACCTCATTTTAAATTCT+GGG - chr4_3:56812038-56812057 Msa0650070:three_prime_UTR 25.0%
!! ATTGAAGTTTCAGAATTTTG+TGG - chr4_3:56812125-56812144 Msa0650070:CDS 25.0%
!! TTGAAGTTTCAGAATTTTGT+GGG - chr4_3:56812126-56812145 Msa0650070:CDS 25.0%
! AAAAAGCCAAAAAGAAAGAA+AGG - chr4_3:56812328-56812347 Msa0650070:intron 25.0%
!!! AGTTCAAGTTTGAAATTTTG+TGG - chr4_3:56812366-56812385 Msa0650070:intron 25.0%
! CCTTTCTGTTATTCAAATTT+AGG + chr4_3:56812570-56812589 None:intergenic 25.0%
! CCTAAATTTGAATAACAGAA+AGG - chr4_3:56812567-56812586 Msa0650070:intron 25.0%
! TTAGGAAAGATGTGAAAATA+TGG - chr4_3:56812822-56812841 Msa0650070:intron 25.0%
!!! GTGAATTCTTTAATTTTTCC+TGG + chr4_3:56812918-56812937 None:intergenic 25.0%
! GGAAAAATTAAAGAATTCAC+TGG - chr4_3:56812918-56812937 Msa0650070:intron 25.0%
!!! GATTTCTATACTTTTTTGCT+TGG + chr4_3:56812950-56812969 None:intergenic 25.0%
! GCAATAGCATTTATTTATCA+CGG + chr4_3:56813007-56813026 None:intergenic 25.0%
!! GTCTTTTGCCTTTTAAATTT+TGG - chr4_3:56813211-56813230 Msa0650070:CDS 25.0%
!! ATTGGAATTCAAGTTAGAAT+AGG - chr4_3:56813750-56813769 Msa0650070:intron 25.0%
! GGTATATTATTCAATTTCCT+TGG - chr4_3:56813969-56813988 Msa0650070:intron 25.0%
! TCATGAAACTAAAAGAATCT+AGG - chr4_3:56814137-56814156 Msa0650070:CDS 25.0%
! CATGAAACTAAAAGAATCTA+GGG - chr4_3:56814138-56814157 Msa0650070:CDS 25.0%
! TTTATTATTAGAGTCATGAC+AGG - chr4_3:56814258-56814277 Msa0650070:intron 25.0%
! TATCTTACAAAAAACACAAG+TGG + chr4_3:56814428-56814447 None:intergenic 25.0%
! AATTGCATATGTTTCTTGTT+AGG - chr4_3:56814510-56814529 Msa0650070:intron 25.0%
!!! TAAACAATCTCAGTTTTAAC+AGG - chr4_3:56814734-56814753 Msa0650070:intron 25.0%
!!! AGTTTTAACAGGAGTTAAAA+GGG - chr4_3:56814745-56814764 Msa0650070:CDS 25.0%
! ATTCAGTTATCCATTATCAA+TGG - chr4_3:56814836-56814855 Msa0650070:CDS 25.0%
! CAAATTTAAAAGAATGCTTC+TGG + chr4_3:56815013-56815032 None:intergenic 25.0%
! TACATTACAATGCAATAATG+AGG + chr4_3:56815511-56815530 None:intergenic 25.0%
!! TTTTATAACAAGAACCATCT+CGG + chr4_3:56815554-56815573 None:intergenic 25.0%
! TTAGATTAAAATGGACAAAC+TGG - chr4_3:56815890-56815909 Msa0650070:intron 25.0%
! TTATGATTATGGAAGATTGA+GGG + chr4_3:56816184-56816203 None:intergenic 25.0%
! ATCTTCCATAATCATAACAA+TGG - chr4_3:56816187-56816206 Msa0650070:intron 25.0%
!! GATGATTATTTCTTTGTCAT+TGG - chr4_3:56816600-56816619 Msa0650070:CDS 25.0%
TGGTTACCAAAATTCAAAAC+CGG - chr4_3:56811934-56811953 Msa0650070:three_prime_UTR 30.0%
! ACATCCCAGAATTTAAAATG+AGG + chr4_3:56812045-56812064 None:intergenic 30.0%
! TGCCTTATTCTTCCATTATA+CGG + chr4_3:56812186-56812205 None:intergenic 30.0%
GACAAGTATTCTTGTAAACT+GGG - chr4_3:56812517-56812536 Msa0650070:intron 30.0%
AATATGAGTAATCAAGCAGT+AGG + chr4_3:56812739-56812758 None:intergenic 30.0%
GGATTATATAAAAAGGCTCA+AGG - chr4_3:56812846-56812865 Msa0650070:CDS 30.0%
!!! TTTACCGATTTTCTTCACTT+CGG - chr4_3:56812980-56812999 Msa0650070:intron 30.0%
GAAGAAGAAAAAAAGTGGAA+AGG + chr4_3:56813456-56813475 None:intergenic 30.0%
GATTGGAAGAAGAAAAAAAG+TGG + chr4_3:56813461-56813480 None:intergenic 30.0%
AGTTTAATTCCTGCAATGAT+TGG + chr4_3:56813478-56813497 None:intergenic 30.0%
TTTATACATTTCATTGAGCG+AGG + chr4_3:56813542-56813561 None:intergenic 30.0%
CGCTCAATGAAATGTATAAA+CGG - chr4_3:56813542-56813561 Msa0650070:CDS 30.0%
ACAAGTTTACAACAGTACAA+TGG - chr4_3:56813580-56813599 Msa0650070:CDS 30.0%
! CACATGTGATTCTTTTCAAT+TGG - chr4_3:56813732-56813751 Msa0650070:intron 30.0%
ACTCATTCTTTATCTTCTTC+TGG - chr4_3:56813782-56813801 Msa0650070:intron 30.0%
CTCATTCTTTATCTTCTTCT+GGG - chr4_3:56813783-56813802 Msa0650070:intron 30.0%
GAAGACTATTAAAAGAACCA+AGG + chr4_3:56813989-56814008 None:intergenic 30.0%
TTAATAGTCTTCTCAAGAAG+AGG - chr4_3:56813997-56814016 Msa0650070:intron 30.0%
AGTGAAGTTTATTCTATGAG+AGG - chr4_3:56814046-56814065 Msa0650070:intron 30.0%
ATATAGAACCATAACAGCTT+AGG - chr4_3:56814445-56814464 Msa0650070:intron 30.0%
ATAACTATCCTAAGCTGTTA+TGG + chr4_3:56814456-56814475 None:intergenic 30.0%
GGTTCAATGAATTACCAAAA+TGG + chr4_3:56814674-56814693 None:intergenic 30.0%
!! CAGTTTTAACAGGAGTTAAA+AGG - chr4_3:56814744-56814763 Msa0650070:CDS 30.0%
! CACAAGAGATATACCATTTT+GGG + chr4_3:56814889-56814908 None:intergenic 30.0%
! TCACAAGAGATATACCATTT+TGG + chr4_3:56814890-56814909 None:intergenic 30.0%
!!! GTGACTCCTATTTTGTTTTT+AGG - chr4_3:56814987-56815006 Msa0650070:intron 30.0%
TTCTGGCCTAAAAACAAAAT+AGG + chr4_3:56814996-56815015 None:intergenic 30.0%
! CATTTTTCCTTGGATTTCTT+TGG - chr4_3:56815162-56815181 Msa0650070:intron 30.0%
AATATTTGTTCTAACGAACG+AGG + chr4_3:56815409-56815428 None:intergenic 30.0%
!!! AAATTTTCAGGTGTCAATGT+TGG - chr4_3:56815571-56815590 Msa0650070:CDS 30.0%
TGTAGATAATAAATCGCGAA+TGG + chr4_3:56815612-56815631 None:intergenic 30.0%
ATCTACAAACAGATCATCAT+CGG - chr4_3:56815625-56815644 Msa0650070:CDS 30.0%
ACAATCAAACATGACGTAAA+TGG - chr4_3:56815689-56815708 Msa0650070:intron 30.0%
!! ATTTTGGTGCAACAAAATGT+TGG - chr4_3:56815937-56815956 Msa0650070:intron 30.0%
TCGAATATATGGTGTAAATG+AGG - chr4_3:56816100-56816119 Msa0650070:CDS 30.0%
TATGATTATGGAAGATTGAG+GGG + chr4_3:56816183-56816202 None:intergenic 30.0%
GTTATGATTATGGAAGATTG+AGG + chr4_3:56816185-56816204 None:intergenic 30.0%
GTAATTATCATTCTCTCACA+TGG - chr4_3:56816552-56816571 Msa0650070:intron 30.0%
TTGAGAGATTCTGCTTCAAA+TGG - chr4_3:56811914-56811933 Msa0650070:three_prime_UTR 35.0%
ATGATACTGCAATGAAACAG+AGG + chr4_3:56812075-56812094 None:intergenic 35.0%
! CTCCGTATAATGGAAGAATA+AGG - chr4_3:56812181-56812200 Msa0650070:CDS 35.0%
! CAAGCTTTAACAGTTGTGAA+TGG - chr4_3:56812204-56812223 Msa0650070:CDS 35.0%
CGACAAGTATTCTTGTAAAC+TGG - chr4_3:56812516-56812535 Msa0650070:intron 35.0%
GAGAAAACAAGATGTGATCA+CGG + chr4_3:56812630-56812649 None:intergenic 35.0%
GGAAAGATGTGAAAATATGG+TGG - chr4_3:56812825-56812844 Msa0650070:intron 35.0%
! AGAGATGCTGCTTAAAATCA+AGG - chr4_3:56813082-56813101 Msa0650070:intron 35.0%
! TTTCTAAAGAGAGAGAAGCA+AGG - chr4_3:56813315-56813334 Msa0650070:CDS 35.0%
GATTCAAAGTGCAAATCAGA+AGG - chr4_3:56813397-56813416 Msa0650070:intron 35.0%
TTTCTTCTTCCAATCATTGC+AGG - chr4_3:56813466-56813485 Msa0650070:intron 35.0%
CAAACGTGTAGAGAAAGAAA+AGG - chr4_3:56813642-56813661 Msa0650070:intron 35.0%
TGTGAAAGCAGAACTTACAA+TGG + chr4_3:56813716-56813735 None:intergenic 35.0%
TCATTTCGTATTCATGCAAC+CGG - chr4_3:56813948-56813967 Msa0650070:intron 35.0%
TTTGCGCTTGAGATAATTGA+CGG + chr4_3:56814102-56814121 None:intergenic 35.0%
GACATTAAAAGCAAGTGAAC+TGG - chr4_3:56814189-56814208 Msa0650070:intron 35.0%
ATTAAAAGCAAGTGAACTGG+AGG - chr4_3:56814192-56814211 Msa0650070:intron 35.0%
ACAAAATTGTTGCGTGCTAT+TGG - chr4_3:56814393-56814412 Msa0650070:CDS 35.0%
ATGTATCTGTATTCGAGACA+AGG - chr4_3:56814539-56814558 Msa0650070:intron 35.0%
AGACAAGGACAGAATTTGAA+GGG - chr4_3:56814554-56814573 Msa0650070:intron 35.0%
ATAAACTTATAGAAGGGGAG+AGG - chr4_3:56814626-56814645 Msa0650070:CDS 35.0%
CCAGAAGTTTCCATTGATAA+TGG + chr4_3:56814849-56814868 None:intergenic 35.0%
CCATTATCAATGGAAACTTC+TGG - chr4_3:56814846-56814865 Msa0650070:CDS 35.0%
! AAGTGCTCTTGATGGTTATA+AGG - chr4_3:56815097-56815116 Msa0650070:intron 35.0%
ATCAGAACCAAAGAAATCCA+AGG + chr4_3:56815172-56815191 None:intergenic 35.0%
ACACATACACATCAACCATT+TGG - chr4_3:56815261-56815280 Msa0650070:CDS 35.0%
AGGGAAAACCTATACAATGA+TGG - chr4_3:56815348-56815367 Msa0650070:CDS 35.0%
GGGAAAACCTATACAATGAT+GGG - chr4_3:56815349-56815368 Msa0650070:CDS 35.0%
ATACGAAATGCAGGTAACAT+TGG - chr4_3:56815465-56815484 Msa0650070:intron 35.0%
! TTTTTGAACATGATCCGAGA+TGG - chr4_3:56815537-56815556 Msa0650070:CDS 35.0%
TTGATTGTGTATTGCTTTCC+AGG + chr4_3:56815677-56815696 None:intergenic 35.0%
! TGTTTCTGATCTTACAGTAG+TGG - chr4_3:56815721-56815740 Msa0650070:intron 35.0%
TAAATCAAGCTGCAAATAGC+AGG - chr4_3:56815777-56815796 Msa0650070:CDS 35.0%
! TTTTTGCCTCTTAGATCTGT+GGG - chr4_3:56816026-56816045 Msa0650070:CDS 35.0%
GTGTTCACTCTTCGAATATA+TGG - chr4_3:56816089-56816108 Msa0650070:CDS 35.0%
GCATGCCATTGTTATGATTA+TGG + chr4_3:56816195-56816214 None:intergenic 35.0%
CTCTGGCAGAGAAATAAATT+AGG + chr4_3:56816230-56816249 None:intergenic 35.0%
! ATGATTAAACAGCCTTGTCT+TGG - chr4_3:56816663-56816682 Msa0650070:CDS 35.0%
! CATTTACTCTAGAAGCAAAC+CGG + chr4_3:56816764-56816783 None:intergenic 35.0%
AGAGTAAATGCTTGTGAGAT+TGG - chr4_3:56816774-56816793 Msa0650070:CDS 35.0%
TTGAAGCAGAATCTCTCAAC+TGG + chr4_3:56811913-56811932 None:intergenic 40.0%
GATGTGTGTGTGAGTGATAA+TGG + chr4_3:56811963-56811982 None:intergenic 40.0%
TAAGCACCTGCTAGAAACAA+TGG - chr4_3:56812152-56812171 Msa0650070:CDS 40.0%
GCTTTAACAGTTGTGAATGG+CGG - chr4_3:56812207-56812226 Msa0650070:CDS 40.0%
CTTTAACAGTTGTGAATGGC+GGG - chr4_3:56812208-56812227 Msa0650070:CDS 40.0%
TAATCCGATCCAGCATTACT+CGG + chr4_3:56812261-56812280 None:intergenic 40.0%
AGTAATGCTGGATCGGATTA+TGG - chr4_3:56812261-56812280 Msa0650070:intron 40.0%
!! CAGAAAGGTATTGCAATCAG+AGG - chr4_3:56812582-56812601 Msa0650070:intron 40.0%
CAAGATGTGATCACGGAATT+TGG + chr4_3:56812623-56812642 None:intergenic 40.0%
ATCTGTTAGAACAGAAACCC+TGG + chr4_3:56812686-56812705 None:intergenic 40.0%
GCTGCTTAAAATCAAGGAAG+AGG - chr4_3:56813088-56813107 Msa0650070:intron 40.0%
AAAGGAAGAAGCAGAGAAGT+CGG - chr4_3:56813172-56813191 Msa0650070:CDS 40.0%
TTGTAAATACAAGGCTGCAG+TGG - chr4_3:56813286-56813305 Msa0650070:CDS 40.0%
AAGCAAGGCTTGATATTGAG+AGG - chr4_3:56813330-56813349 Msa0650070:CDS 40.0%
! AGTAAGTTGACCCTTTAGCA+TGG + chr4_3:56813689-56813708 None:intergenic 40.0%
AAGATCATCCTTCTGCTTTG+TGG + chr4_3:56814023-56814042 None:intergenic 40.0%
GGAGAACTCTTGCATTGAAT+TGG - chr4_3:56814159-56814178 Msa0650070:CDS 40.0%
GAGACAAGGACAGAATTTGA+AGG - chr4_3:56814553-56814572 Msa0650070:intron 40.0%
! GAGATATACCATTTTGGGCT+AGG + chr4_3:56814884-56814903 None:intergenic 40.0%
! CTTGTACAAAGTGCTCTTGA+TGG - chr4_3:56815089-56815108 Msa0650070:intron 40.0%
TAGGTTTGCATCTTTGCCTA+TGG - chr4_3:56815313-56815332 Msa0650070:CDS 40.0%
ATCTTTGCCTATGGTCAAAC+AGG - chr4_3:56815322-56815341 Msa0650070:CDS 40.0%
AGGTCTTCCCATCATTGTAT+AGG + chr4_3:56815359-56815378 None:intergenic 40.0%
! TATACAATGATGGGAAGACC+TGG - chr4_3:56815358-56815377 Msa0650070:CDS 40.0%
CTGGACATCCTGATGAAAAA+GGG - chr4_3:56815377-56815396 Msa0650070:CDS 40.0%
!! GGTATCAACCCTTTTTCATC+AGG + chr4_3:56815388-56815407 None:intergenic 40.0%
AAACAGTCTCAACAACCTCA+AGG - chr4_3:56815436-56815455 Msa0650070:intron 40.0%
ATTTCGTATTTCCAGCCTTG+AGG + chr4_3:56815454-56815473 None:intergenic 40.0%
! GTTTTTGCCTCTTAGATCTG+TGG - chr4_3:56816025-56816044 Msa0650070:CDS 40.0%
! GTTTTTCCCACAGATCTAAG+AGG + chr4_3:56816035-56816054 None:intergenic 40.0%
TCAGAACACCTTGTACTTGT+TGG + chr4_3:56816259-56816278 None:intergenic 40.0%
CTGAATCTAATTGACCTTGC+TGG - chr4_3:56816275-56816294 Msa0650070:intron 40.0%
CTTTCAAAGAGTGGTTCAAC+CGG - chr4_3:56816308-56816327 Msa0650070:intron 40.0%
ATACCTGAGTTTCTCTCAAC+CGG + chr4_3:56816337-56816356 None:intergenic 40.0%
GAGTGATGTCATATTTGCCT+TGG - chr4_3:56816473-56816492 Msa0650070:intron 40.0%
!! GTAAGCTTTGAGTTCCTGAA+TGG + chr4_3:56816519-56816538 None:intergenic 40.0%
! ATTAAACAGCCTTGTCTTGG+CGG - chr4_3:56816666-56816685 Msa0650070:CDS 40.0%
CATATCACCTGATCCTTCTT+CGG - chr4_3:56816716-56816735 Msa0650070:CDS 40.0%
ATGCACTTGACTGCTACAAA+TGG + chr4_3:56816890-56816909 None:intergenic 40.0%
!!! TGGAGGCCGGTTTTGAATTT+TGG + chr4_3:56811943-56811962 None:intergenic 45.0%
!! GTGTGTGTGAGTGATAATGG+AGG + chr4_3:56811960-56811979 None:intergenic 45.0%
!! AAAAGAGGGTACCTCTGAAG+GGG + chr4_3:56811991-56812010 None:intergenic 45.0%
!! GAAAAGAGGGTACCTCTGAA+GGG + chr4_3:56811992-56812011 None:intergenic 45.0%
!! AGAAAAGAGGGTACCTCTGA+AGG + chr4_3:56811993-56812012 None:intergenic 45.0%
!! TCTCCACCATTGTTTCTAGC+AGG + chr4_3:56812161-56812180 None:intergenic 45.0%
! ATGGTGGAGACTCCGTATAA+TGG - chr4_3:56812171-56812190 Msa0650070:CDS 45.0%
! GGTATTGCAATCAGAGGTGT+AGG - chr4_3:56812588-56812607 Msa0650070:intron 45.0%
GGCTCAAGGTTTGTATCAGA+TGG - chr4_3:56812860-56812879 Msa0650070:CDS 45.0%
TATCAGATGGTTCCAAGACC+TGG - chr4_3:56812873-56812892 Msa0650070:CDS 45.0%
CGGTCCGAAGTGAAGAAAAT+CGG + chr4_3:56812987-56813006 None:intergenic 45.0%
GTCACATACTACTCTTTCCG+AGG - chr4_3:56813352-56813371 Msa0650070:CDS 45.0%
GAAAGAAAAGGCTACTGCAG+AGG - chr4_3:56813654-56813673 Msa0650070:intron 45.0%
GAGAACATCGCCATGCTAAA+GGG - chr4_3:56813676-56813695 Msa0650070:intron 45.0%
AAAGCAAGTGAACTGGAGGT+TGG - chr4_3:56814196-56814215 Msa0650070:intron 45.0%
AGCTGCAGAGAAGAAATTGC+AGG - chr4_3:56814351-56814370 Msa0650070:CDS 45.0%
CGACTTTCATCTGGCAACAA+AGG + chr4_3:56814798-56814817 None:intergenic 45.0%
TCTGTGCTACGACTTTCATC+TGG + chr4_3:56814807-56814826 None:intergenic 45.0%
GATGAAAGTCGTAGCACAGA+AGG - chr4_3:56814807-56814826 Msa0650070:CDS 45.0%
TCAATGGAAACTTCTGGACG+AGG - chr4_3:56814852-56814871 Msa0650070:CDS 45.0%
GGAATTGACCTAGCCCAAAA+TGG - chr4_3:56814873-56814892 Msa0650070:CDS 45.0%
GCTACATATAAGGCACGTCT+TGG - chr4_3:56815200-56815219 Msa0650070:intron 45.0%
CCTATGGTCAAACAGGATCA+GGG - chr4_3:56815329-56815348 Msa0650070:CDS 45.0%
!! CCTTTTTCATCAGGATGTCC+AGG + chr4_3:56815379-56815398 None:intergenic 45.0%
CCTGGACATCCTGATGAAAA+AGG - chr4_3:56815376-56815395 Msa0650070:CDS 45.0%
AGGCTGGAAATACGAAATGC+AGG - chr4_3:56815456-56815475 Msa0650070:intron 45.0%
GATGTATCACGCGTGGAAAA+TGG - chr4_3:56815647-56815666 Msa0650070:intron 45.0%
!! AGCACTGACCAACAAGTACA+AGG - chr4_3:56816248-56816267 Msa0650070:intron 45.0%
CATATTTGCCTTGGCCAAGA+AGG - chr4_3:56816482-56816501 Msa0650070:intron 45.0%
ATGATCTTCCTTCTTGGCCA+AGG + chr4_3:56816493-56816512 None:intergenic 45.0%
TGGCACATGATCTTCCTTCT+TGG + chr4_3:56816499-56816518 None:intergenic 45.0%
! AGGAAGATCATGTGCCATTC+AGG - chr4_3:56816502-56816521 Msa0650070:intron 45.0%
! TTAAACAGCCTTGTCTTGGC+GGG - chr4_3:56816667-56816686 Msa0650070:CDS 45.0%
!! TAAATAAAATAAATAAATCT+AGG + chr4_3:56813054-56813073 None:intergenic 5.0%
!! GTGTGAGTGATAATGGAGGC+CGG + chr4_3:56811956-56811975 None:intergenic 50.0%
GCACCTGCTAGAAACAATGG+TGG - chr4_3:56812155-56812174 Msa0650070:CDS 50.0%
!! TACTCGGAGGAGCACTACTT+AGG + chr4_3:56812245-56812264 None:intergenic 50.0%
TCCTCCGAGTAATGCTGGAT+CGG - chr4_3:56812254-56812273 Msa0650070:CDS 50.0%
CTATTGAGTAGCTCGTCTCC+AGG + chr4_3:56812894-56812913 None:intergenic 50.0%
GACGAGCTACTCAATAGACC+AGG - chr4_3:56812897-56812916 Msa0650070:intron 50.0%
ACTACTCTTTCCGAGGACCT+CGG - chr4_3:56813359-56813378 Msa0650070:intron 50.0%
! TTCAGCTTTTCCGAGGTCCT+CGG + chr4_3:56813372-56813391 None:intergenic 50.0%
! TCTCTCGTTCAGCTTTTCCG+AGG + chr4_3:56813379-56813398 None:intergenic 50.0%
GGAGAACATCGCCATGCTAA+AGG - chr4_3:56813675-56813694 Msa0650070:intron 50.0%
AGAAGAGGCCACAAAGCAGA+AGG - chr4_3:56814012-56814031 Msa0650070:intron 50.0%
ACAGGACGAGTTTCTTTCGC+AGG - chr4_3:56814276-56814295 Msa0650070:CDS 50.0%
GCCTATGGTCAAACAGGATC+AGG - chr4_3:56815328-56815347 Msa0650070:CDS 50.0%
CCCTGATCCTGTTTGACCAT+AGG + chr4_3:56815332-56815351 None:intergenic 50.0%
AGTCTCAACAACCTCAAGGC+TGG - chr4_3:56815440-56815459 Msa0650070:intron 50.0%
ATCATCGGATGTATCACGCG+TGG - chr4_3:56815640-56815659 Msa0650070:intron 50.0%
! GTACTTGTTGGTCAGTGCTC+TGG + chr4_3:56816247-56816266 None:intergenic 50.0%
AGCGAGCGTCTTTCAAAGAG+TGG - chr4_3:56816299-56816318 Msa0650070:intron 50.0%
AGTTTCTCTCAACCGGTCAC+CGG + chr4_3:56816330-56816349 None:intergenic 50.0%
TGACCGGTTGAGAGAAACTC+AGG - chr4_3:56816331-56816350 Msa0650070:intron 50.0%
! TAAACAGCCTTGTCTTGGCG+GGG - chr4_3:56816668-56816687 Msa0650070:CDS 50.0%
TCACCTGATCCTTCTTCGGT+TGG - chr4_3:56816720-56816739 Msa0650070:CDS 50.0%
TCAAACGAGAGTCAGTAGCG+CGG + chr4_3:56816824-56816843 None:intergenic 50.0%
CACATCTCCAACCCCTTCAG+AGG - chr4_3:56811977-56811996 Msa0650070:three_prime_UTR 55.0%
AGTGCTCCTCCGAGTAATGC+TGG - chr4_3:56812249-56812268 Msa0650070:CDS 55.0%
TCCGATCCAGCATTACTCGG+AGG + chr4_3:56812258-56812277 None:intergenic 55.0%
AGTAGCTCGTCTCCAGGTCT+TGG + chr4_3:56812888-56812907 None:intergenic 55.0%
TCCGTGTATTCTGTCGCGTG+AGG - chr4_3:56814772-56814791 Msa0650070:CDS 55.0%
GCCTCACGCGACAGAATACA+CGG + chr4_3:56814776-56814795 None:intergenic 55.0%
CGCGTGGAAAATGGTACTCC+TGG - chr4_3:56815656-56815675 Msa0650070:intron 55.0%
AAAGACGCTCGCTACCAGCA+AGG + chr4_3:56816292-56816311 None:intergenic 55.0%
AGAGTGGTTCAACCGGTGAC+CGG - chr4_3:56816315-56816334 Msa0650070:intron 55.0%
TTTGAGTCCCCGCCAAGACA+AGG + chr4_3:56816678-56816697 None:intergenic 55.0%
TCGCCAACCGAAGAAGGATC+AGG + chr4_3:56816726-56816745 None:intergenic 55.0%
AGTGACTCGCCAACCGAAGA+AGG + chr4_3:56816732-56816751 None:intergenic 55.0%
GCGAGTCACTATGCTCACTC+CGG - chr4_3:56816742-56816761 Msa0650070:CDS 55.0%
ACACCTCGTCGTCAGACCAA+TGG - chr4_3:56816798-56816817 Msa0650070:CDS 55.0%
!! GAGGGTACCTCTGAAGGGGT+TGG + chr4_3:56811987-56812006 None:intergenic 60.0%
!! GTGAATGGCGGGCACGATGT+TGG - chr4_3:56812219-56812238 Msa0650070:CDS 60.0%
AGAGTCAGTAGCGCGGCCAT+TGG + chr4_3:56816817-56816836 None:intergenic 60.0%
! CGGCCATTGGTCTGACGACG+AGG + chr4_3:56816804-56816823 None:intergenic 65.0%
Chromosome Type Strat End Strand Name
chr4_3 gene 56811854 56817099 56811854 ID=Msa0650070;Name=Msa0650070
chr4_3 mRNA 56811854 56817099 56811854 ID=Msa0650070-mRNA-1;Parent=Msa0650070;Name=Msa0650070-mRNA-1;_AED=0.14;_eAED=0.14;_QI=59|1|1|1|0.88|0.83|18|245|795
chr4_3 exon 56811854 56812278 56811854 ID=Msa0650070-mRNA-1:exon:14908;Parent=Msa0650070-mRNA-1
chr4_3 exon 56812402 56812506 56812402 ID=Msa0650070-mRNA-1:exon:14907;Parent=Msa0650070-mRNA-1
chr4_3 exon 56812601 56812705 56812601 ID=Msa0650070-mRNA-1:exon:14906;Parent=Msa0650070-mRNA-1
chr4_3 exon 56812832 56812913 56812832 ID=Msa0650070-mRNA-1:exon:14905;Parent=Msa0650070-mRNA-1
chr4_3 exon 56813155 56813372 56813155 ID=Msa0650070-mRNA-1:exon:14904;Parent=Msa0650070-mRNA-1
chr4_3 exon 56813476 56813637 56813476 ID=Msa0650070-mRNA-1:exon:14903;Parent=Msa0650070-mRNA-1
chr4_3 exon 56813835 56813944 56813835 ID=Msa0650070-mRNA-1:exon:14902;Parent=Msa0650070-mRNA-1
chr4_3 exon 56814059 56814197 56814059 ID=Msa0650070-mRNA-1:exon:14901;Parent=Msa0650070-mRNA-1
chr4_3 exon 56814275 56814421 56814275 ID=Msa0650070-mRNA-1:exon:14900;Parent=Msa0650070-mRNA-1
chr4_3 exon 56814581 56814655 56814581 ID=Msa0650070-mRNA-1:exon:14899;Parent=Msa0650070-mRNA-1
chr4_3 exon 56814740 56814949 56814740 ID=Msa0650070-mRNA-1:exon:14898;Parent=Msa0650070-mRNA-1
chr4_3 exon 56815236 56815418 56815236 ID=Msa0650070-mRNA-1:exon:14897;Parent=Msa0650070-mRNA-1
chr4_3 exon 56815535 56815654 56815535 ID=Msa0650070-mRNA-1:exon:14896;Parent=Msa0650070-mRNA-1
chr4_3 exon 56815760 56815869 56815760 ID=Msa0650070-mRNA-1:exon:14895;Parent=Msa0650070-mRNA-1
chr4_3 exon 56815983 56816127 56815983 ID=Msa0650070-mRNA-1:exon:14894;Parent=Msa0650070-mRNA-1
chr4_3 exon 56816591 56816821 56816591 ID=Msa0650070-mRNA-1:exon:14893;Parent=Msa0650070-mRNA-1
chr4_3 exon 56816955 56817059 56816955 ID=Msa0650070-mRNA-1:exon:14892;Parent=Msa0650070-mRNA-1
chr4_3 exon 56817080 56817099 56817080 ID=Msa0650070-mRNA-1:exon:14891;Parent=Msa0650070-mRNA-1
chr4_3 five_prime_UTR 56817080 56817099 56817080 ID=Msa0650070-mRNA-1:five_prime_utr;Parent=Msa0650070-mRNA-1
chr4_3 five_prime_UTR 56817021 56817059 56817021 ID=Msa0650070-mRNA-1:five_prime_utr;Parent=Msa0650070-mRNA-1
chr4_3 CDS 56816955 56817020 56816955 ID=Msa0650070-mRNA-1:cds;Parent=Msa0650070-mRNA-1
chr4_3 CDS 56816591 56816821 56816591 ID=Msa0650070-mRNA-1:cds;Parent=Msa0650070-mRNA-1
chr4_3 CDS 56815983 56816127 56815983 ID=Msa0650070-mRNA-1:cds;Parent=Msa0650070-mRNA-1
chr4_3 CDS 56815760 56815869 56815760 ID=Msa0650070-mRNA-1:cds;Parent=Msa0650070-mRNA-1
chr4_3 CDS 56815535 56815654 56815535 ID=Msa0650070-mRNA-1:cds;Parent=Msa0650070-mRNA-1
chr4_3 CDS 56815236 56815418 56815236 ID=Msa0650070-mRNA-1:cds;Parent=Msa0650070-mRNA-1
chr4_3 CDS 56814740 56814949 56814740 ID=Msa0650070-mRNA-1:cds;Parent=Msa0650070-mRNA-1
chr4_3 CDS 56814581 56814655 56814581 ID=Msa0650070-mRNA-1:cds;Parent=Msa0650070-mRNA-1
chr4_3 CDS 56814275 56814421 56814275 ID=Msa0650070-mRNA-1:cds;Parent=Msa0650070-mRNA-1
chr4_3 CDS 56814059 56814197 56814059 ID=Msa0650070-mRNA-1:cds;Parent=Msa0650070-mRNA-1
chr4_3 CDS 56813835 56813944 56813835 ID=Msa0650070-mRNA-1:cds;Parent=Msa0650070-mRNA-1
chr4_3 CDS 56813476 56813637 56813476 ID=Msa0650070-mRNA-1:cds;Parent=Msa0650070-mRNA-1
chr4_3 CDS 56813155 56813372 56813155 ID=Msa0650070-mRNA-1:cds;Parent=Msa0650070-mRNA-1
chr4_3 CDS 56812832 56812913 56812832 ID=Msa0650070-mRNA-1:cds;Parent=Msa0650070-mRNA-1
chr4_3 CDS 56812601 56812705 56812601 ID=Msa0650070-mRNA-1:cds;Parent=Msa0650070-mRNA-1
chr4_3 CDS 56812402 56812506 56812402 ID=Msa0650070-mRNA-1:cds;Parent=Msa0650070-mRNA-1
chr4_3 CDS 56812099 56812278 56812099 ID=Msa0650070-mRNA-1:cds;Parent=Msa0650070-mRNA-1
chr4_3 three_prime_UTR 56811854 56812098 56811854 ID=Msa0650070-mRNA-1:three_prime_utr;Parent=Msa0650070-mRNA-1
Gene Sequence

>Msa0650070

ATGGTTACCAAAATTCAAAACCGGCCTCCATTATCACTCACACACACATCTCCAACCCCTTCAGAGTTTCAGAATTTTGTGGGAGATAAGCACCTGCTAGAAACAATGGTGGAGACTCCGTATAATGGAAGAATAAGGCAAGCTTTAACAGTTGTGAATGGCGGGCACGATGTTGGCCTAAGTAGTGCTCCTCCGAGTAATGCTGGATCGGATTATGGTGTAATAGAGTTCACAAGAGAAGATGTAGAAGCATTGCTAAATGAAAAAGCCAAAAAGAAAGAAAGGTTTAATTATAAGGAAAGATGTGAAAATATGGTGGATTATATAAAAAGGCTCAAGGTTTGTATCAGATGGTTCCAAGACCTGGAGACGAGCTACTCAATAGACCAGGAAAAATTAAAGAATTCACTGGAAATGACCAAGCAAAAAAGTATAGAAATCGAGATGCTGCTTAAAATCAAGGAAGAGGAGCTGAATTTAATTATTATAGAAATGAGAAAGAATTGCACTTCTTTACAAGAGAAATTGATAAAGGAAGAAGCAGAGAAGTCGGCTGCAGTGGAATCTCTTTCTAAAGAGAGAGAAGCAAGGCTTGATATTGAGAGGTCACATACTACTCTTTCCGAGGACCTCGGAAAAGCTGAACGAGAGATTCAAAGTGCAAATCAGAAGATATCCTCGCTCAATGAAATGTATAAACGGTTACAAGAATACATAACAAGTTTACAACAGTACAATGGAAAACTTCATACTGAGCTTTCATCAGTTGAAGATGAACTCAAACGTGTAGAGAAAGAAAAGGCTACTGCAGAGGAGAACATCGCCATGCTAAAGGGTCAACTTACTTTATCCATTTCTTCTCAAGAAGAGGCCACAAAGCAGAAGGATGATCTTGCTAGTGAAGTTTATTCTATGAGAGGAGAGTTGAAACAAGTAAGAGATGATAGAGACCGTCAATTATCTCAAGCGCAAAGTTTAAATGCTGAGTTCATGAAACTAAAAGAATCTAGGGAGAACTCTTGCATTGAATTGGACAGCTTGACATTAAAAGCAAGTGAACTGGAGGAAAAAAGTTCATTGAAAGAGAATCAAATAAAGGCATTGCAAGAAAAGTTAGCAGCTGCAGAGAAGAAATTGCAGGTGACTGATGTATCTGTATTCGAGACAAGGACAGAATTTGAAGGGCAACAAAAACTTGTTGACGAGTTGCAAAGACGCTTAGAAGATTCAGAATATAAACTTATAGAAGGGGAGAGGCTGCGAAAAAAATTACACAATACCATTTTGGAGTTAAAAGGGAACATCCGTGTATTCTGTCGCGTGAGGCCTTTGTTGCCAGATGAAAGTCGTAGCACAGAAGGCAAGATATTCAGTTATCCATTATCAATGGAAACTTCTGGACGAGGAATTGACCTAGCCCAAAATGGCCAGAAGCATTCTTTTAAATTTGATAAAGTTTTTATACAAGACGTATCACAAGAAGAAGTGTTTGTAGAAGTTTCACAGCTTGTACAAAGTGCTCTTGATGGTTATAAGGTTTGCATCTTTGCCTATGGTCAAACAGGATCAGGGAAAACCTATACAATGATGGGAAGACCTGGACATCCTGATGAAAAAGGGTTGATACCTCGTTCGTTAGAACAAATATTTCAAGCAAAACAGTCTCAACAACCTCAAGGCTGGAAATACGAAATGCAGGTGTCAATGTTGGAAATATACAACGAAACCATTCGCGATTTATTATCTACAAACAGATCATCATCGGATGTATCACGCGTGGAAAATGGTACTCCTGGAAAGCAATACACAATCAAACATGACGTAAATGGAAATACACATGTTTCTGATCTTACAGTAGTGGATGTACACAGTGCGAAAGAAGTCGCGTTTCTTTTAAATCAAGCTGCAAATAGCAGATCTGTGGGAAAAACTCAGATGAATGAACAATCGTCAAGAAGTCATTTCGTGTTCACTCTTCGAATATATGGTGTAAATGAGAGCACTGACCAACAAGTACAAGGTGTTCTGAATCTAATTGACCTTGCTGGTAGCGAGCGTCTTTCAAAGAGTGGTTCAACCGGTGACCGGTTGAGAGAAACTCAGGCAATTAACAAAAGCTTGTCATCATTGAGTGATGTCATATTTGCCTTGGCCAAGAAGGAAGATCATGTGCCATTCAGGAACTCAAAGCTTACATATCTTCTTCAACCTTGTCTTGGCGGGGACTCAAAGACGTTAATGTTTGTAAACATATCACCTGATCCTTCTTCGGTTGGCGAGTCACTATGCTCACTCCGGTTTGCTTCTAGAGTAAATGCTTGTGAGATTGGAACACCTCGTCGTCAGACCAATGGCCGCGCTACTGACTCTCGTTTGAGCTATTTCTGA

Protein sequence

>Msa0650070

MVTKIQNRPPLSLTHTSPTPSEFQNFVGDKHLLETMVETPYNGRIRQALTVVNGGHDVGLSSAPPSNAGSDYGVIEFTREDVEALLNEKAKKKERFNYKERCENMVDYIKRLKVCIRWFQDLETSYSIDQEKLKNSLEMTKQKSIEIEMLLKIKEEELNLIIIEMRKNCTSLQEKLIKEEAEKSAAVESLSKEREARLDIERSHTTLSEDLGKAEREIQSANQKISSLNEMYKRLQEYITSLQQYNGKLHTELSSVEDELKRVEKEKATAEENIAMLKGQLTLSISSQEEATKQKDDLASEVYSMRGELKQVRDDRDRQLSQAQSLNAEFMKLKESRENSCIELDSLTLKASELEEKSSLKENQIKALQEKLAAAEKKLQVTDVSVFETRTEFEGQQKLVDELQRRLEDSEYKLIEGERLRKKLHNTILELKGNIRVFCRVRPLLPDESRSTEGKIFSYPLSMETSGRGIDLAQNGQKHSFKFDKVFIQDVSQEEVFVEVSQLVQSALDGYKVCIFAYGQTGSGKTYTMMGRPGHPDEKGLIPRSLEQIFQAKQSQQPQGWKYEMQVSMLEIYNETIRDLLSTNRSSSDVSRVENGTPGKQYTIKHDVNGNTHVSDLTVVDVHSAKEVAFLLNQAANSRSVGKTQMNEQSSRSHFVFTLRIYGVNESTDQQVQGVLNLIDLAGSERLSKSGSTGDRLRETQAINKSLSSLSDVIFALAKKEDHVPFRNSKLTYLLQPCLGGDSKTLMFVNISPDPSSVGESLCSLRFASRVNACEIGTPRRQTNGRATDSRLSYF*