AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0659260

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0659260 MtrunA17_Chr8g0383871 90.995 211 19 0 159 369 15 225 2.24e-125 360
Msa0659260 MtrunA17_Chr8g0383871 56.250 224 47 5 1 179 1 218 2.73e-63 201
Msa0659260 MtrunA17_Chr8g0383901 84.834 211 24 1 159 369 15 217 1.19e-119 345
Msa0659260 MtrunA17_Chr8g0383901 64.103 195 34 2 1 159 1 195 1.64e-69 217
Msa0659260 MtrunA17_Chr8g0383941 81.132 212 31 3 159 369 16 219 3.59e-119 343
Msa0659260 MtrunA17_Chr8g0383941 58.850 226 32 9 1 179 1 212 1.49e-68 215
Msa0659260 MtrunA17_Chr8g0383861 82.464 211 36 1 159 368 15 225 1.28e-115 335
Msa0659260 MtrunA17_Chr8g0383861 67.411 224 23 3 1 179 1 219 8.73e-88 264
Msa0659260 MtrunA17_Chr8g0383921 81.773 203 34 2 154 355 10 210 2.27e-107 313
Msa0659260 MtrunA17_Chr8g0383921 60.891 202 36 3 1 159 1 202 1.02e-67 212
Msa0659260 MtrunA17_Chr8g0383931 81.651 218 38 2 154 369 10 227 6.43e-106 310
Msa0659260 MtrunA17_Chr8g0383931 57.333 225 45 4 1 179 1 220 2.30e-60 194
Msa0659260 MtrunA17_Chr8g0383881 77.725 211 36 3 159 368 15 215 1.34e-103 304
Msa0659260 MtrunA17_Chr8g0383881 64.706 221 24 4 1 179 1 209 1.41e-78 240
Msa0659260 MtrunA17_Chr3g0129671 62.332 223 71 5 155 369 10 227 2.60e-90 271
Msa0659260 MtrunA17_Chr3g0129671 45.588 204 62 5 1 157 1 202 1.63e-46 158
Msa0659260 MtrunA17_Chr3g0128771 47.586 145 71 2 197 340 36 176 1.86e-38 135
Msa0659260 MtrunA17_Chr3g0128771 38.168 131 40 2 53 142 36 166 3.05e-20 87.0
Msa0659260 MtrunA17_Chr7g0244851 48.966 145 61 5 189 329 18 153 2.36e-38 135
Msa0659260 MtrunA17_Chr7g0244851 31.902 163 69 3 42 162 15 177 1.82e-20 87.8
Msa0659260 MtrunA17_Chr5g0407431 44.654 159 74 5 198 349 26 177 1.08e-35 129
Msa0659260 MtrunA17_Chr5g0407431 40.152 132 40 4 54 146 26 157 4.14e-18 82.0
Msa0659260 MtrunA17_Chr3g0144241 45.255 137 71 3 202 337 26 159 1.03e-33 124
Msa0659260 MtrunA17_Chr3g0144241 35.000 140 47 4 58 155 26 163 3.47e-16 76.3
Msa0659260 MtrunA17_Chr8g0370171 44.444 144 65 5 198 336 19 152 1.01e-32 121
Msa0659260 MtrunA17_Chr8g0370171 34.146 123 41 3 54 137 19 140 1.46e-15 74.7
Msa0659260 MtrunA17_Chr4g0052671 41.447 152 78 5 177 326 7 149 3.30e-29 110
Msa0659260 MtrunA17_Chr4g0052671 27.972 143 66 2 33 138 7 149 7.86e-11 60.1
Msa0659260 MtrunA17_Chr2g0297011 38.000 150 82 4 177 326 7 145 2.06e-27 105
Msa0659260 MtrunA17_Chr2g0297011 31.507 146 59 4 30 138 4 145 1.80e-11 62.0
Msa0659260 MtrunA17_Chr1g0167811 27.439 164 105 3 205 358 35 194 8.29e-20 89.0
Msa0659260 MtrunA17_Chr6g0470751 34.118 170 93 6 168 333 23 177 3.03e-19 87.4
Msa0659260 MtrunA17_Chr1g0191601 31.944 144 93 2 188 329 33 173 3.29e-19 88.2
Msa0659260 MtrunA17_Chr7g0273051 32.500 160 89 4 178 329 18 166 5.60e-19 87.0
Msa0659260 MtrunA17_Chr3g0113811 34.091 132 82 3 200 328 22 151 7.84e-19 83.2
Msa0659260 MtrunA17_Chr1g0203541 46.988 83 40 1 254 332 103 185 1.54e-18 83.2
Msa0659260 MtrunA17_Chr8g0345361 45.570 79 40 2 256 333 92 168 2.54e-18 83.6
Msa0659260 MtrunA17_Chr7g0246761 31.013 158 98 4 209 365 17 164 2.79e-18 82.0
Msa0659260 MtrunA17_Chr5g0426881 29.480 173 116 4 196 363 55 226 3.63e-18 85.1
Msa0659260 MtrunA17_Chr3g0132491 33.083 133 82 3 200 329 54 182 7.76e-18 84.0
Msa0659260 MtrunA17_Chr4g0030831 41.975 81 46 1 246 325 74 154 1.00e-17 80.1
Msa0659260 MtrunA17_Chr4g0067591 44.737 76 35 2 252 325 76 146 1.26e-17 82.0
Msa0659260 MtrunA17_Chr3g0118071 33.600 125 76 2 211 328 25 149 2.34e-17 80.1
Msa0659260 MtrunA17_Chr6g0486651 34.307 137 88 2 191 326 27 162 4.00e-17 82.0
Msa0659260 MtrunA17_Chr5g0430781 45.745 94 45 3 255 348 86 173 5.29e-17 79.0
Msa0659260 MtrunA17_Chr7g0276591 56.140 57 25 0 275 331 93 149 5.58e-17 80.5
Msa0659260 MtrunA17_Chr3g0118061 35.088 114 71 2 232 344 52 163 6.55e-17 79.0
Msa0659260 MtrunA17_Chr4g0027761 40.000 90 47 3 252 341 96 178 8.19e-17 78.2
Msa0659260 MtrunA17_Chr7g0274741 35.455 110 59 3 253 350 67 176 9.70e-17 77.4
Msa0659260 MtrunA17_Chr5g0437361 44.872 78 42 1 252 328 71 148 1.37e-16 76.6
Msa0659260 MtrunA17_Chr5g0426871 34.286 140 75 5 200 328 49 182 2.50e-16 79.7
Msa0659260 MtrunA17_Chr2g0327791 61.702 47 18 0 279 325 131 177 3.63e-16 76.6
Msa0659260 MtrunA17_Chr3g0105441 42.353 85 46 1 248 329 94 178 3.86e-16 77.4
Msa0659260 MtrunA17_Chr2g0295571 40.000 80 47 1 246 325 83 161 1.01e-15 76.6
Msa0659260 MtrunA17_Chr1g0198201 38.158 76 47 0 255 330 60 135 1.13e-15 75.5
Msa0659260 MtrunA17_Chr5g0409211 28.758 153 101 5 202 350 12 160 1.24e-15 74.3
Msa0659260 MtrunA17_Chr3g0143301 33.333 120 72 4 207 325 1 113 1.77e-15 72.4
Msa0659260 MtrunA17_Chr2g0307411 34.711 121 71 2 209 329 34 146 1.79e-15 74.3
Msa0659260 MtrunA17_Chr4g0073141 43.421 76 43 0 254 329 115 190 1.85e-15 77.8
Msa0659260 MtrunA17_Chr5g0427431 33.071 127 67 3 243 364 116 229 2.21e-15 77.0
Msa0659260 MtrunA17_Chr4g0050041 33.333 108 61 2 256 363 126 222 3.27e-15 76.3
Msa0659260 MtrunA17_Chr8g0366561 31.928 166 103 5 201 357 55 219 3.27e-15 76.3
Msa0659260 MtrunA17_Chr8g0381731 37.500 80 49 1 256 335 148 226 3.54e-15 75.5
Msa0659260 MtrunA17_Chr5g0411081 31.915 141 83 5 201 329 55 194 6.38e-15 75.5
Msa0659260 MtrunA17_Chr7g0274711 41.333 75 42 1 256 328 67 141 9.18e-15 72.0
Msa0659260 MtrunA17_Chr6g0451031 38.824 85 47 2 244 325 29 111 1.34e-14 70.1
Msa0659260 MtrunA17_Chr1g0184631 41.333 75 42 1 256 328 68 142 1.48e-14 71.2
Msa0659260 MtrunA17_Chr5g0426781 31.034 116 76 2 217 329 86 200 1.63e-14 73.9
Msa0659260 MtrunA17_Chr8g0350741 35.556 90 55 1 262 351 68 154 1.65e-14 71.2
Msa0659260 MtrunA17_Chr3g0133001 41.667 72 41 1 254 325 128 198 2.39e-14 73.9
Msa0659260 MtrunA17_Chr1g0186661 30.702 114 64 3 225 325 62 173 2.70e-14 73.2
Msa0659260 MtrunA17_Chr7g0269491 36.957 92 49 2 257 339 67 158 2.87e-14 70.9
Msa0659260 MtrunA17_Chr4g0013561 33.708 89 57 1 245 333 74 160 3.05e-14 71.2
Msa0659260 MtrunA17_Chr2g0279431 60.000 45 18 0 281 325 159 203 3.53e-14 73.2
Msa0659260 MtrunA17_Chr6g0451161 27.407 135 86 2 205 328 71 204 7.73e-14 72.0
Msa0659260 MtrunA17_Chr2g0325141 41.558 77 40 1 254 325 57 133 8.97e-14 68.2
Msa0659260 MtrunA17_Chr5g0433861 36.220 127 72 4 208 325 22 148 1.41e-13 70.9
Msa0659260 MtrunA17_Chr2g0325161 38.750 80 44 1 251 325 86 165 1.42e-13 69.7
Msa0659260 MtrunA17_Chr1g0184171 38.961 77 47 0 249 325 96 172 1.63e-13 70.9
Msa0659260 MtrunA17_Chr3g0126931 38.961 77 46 1 253 329 98 173 1.77e-13 70.9
Msa0659260 MtrunA17_Chr8g0348151 37.333 75 44 1 251 325 85 156 1.90e-13 68.6
Msa0659260 MtrunA17_Chr5g0396611 39.506 81 48 1 246 325 302 382 2.04e-13 70.9
Msa0659260 MtrunA17_Chr3g0123631 33.333 123 70 4 209 325 1 117 2.07e-13 68.2
Msa0659260 MtrunA17_Chr5g0396591 38.272 81 49 1 246 325 202 282 2.31e-13 69.7
Msa0659260 MtrunA17_Chr5g0413841 40.000 75 44 1 254 328 114 187 2.54e-13 70.5
Msa0659260 MtrunA17_Chr1g0177041 33.684 95 59 2 253 344 71 164 2.63e-13 67.4
Msa0659260 MtrunA17_Chr5g0444161 42.466 73 39 2 255 325 156 227 3.01e-13 68.9
Msa0659260 MtrunA17_Chr8g0364881 30.435 138 83 3 205 330 5 141 3.52e-13 69.7
Msa0659260 MtrunA17_Chr4g0060981 35.714 98 60 2 230 326 122 217 3.95e-13 68.2
Msa0659260 MtrunA17_Chr3g0123641 33.333 126 72 4 209 328 1 120 4.39e-13 68.2
Msa0659260 MtrunA17_Chr4g0059281 38.889 72 43 1 254 325 104 174 4.40e-13 69.3
Msa0659260 MtrunA17_Chr8g0371291 40.000 75 40 1 254 328 156 225 5.56e-13 67.8
Msa0659260 MtrunA17_Chr7g0248841 43.103 58 33 0 278 335 99 156 6.65e-13 66.2
Msa0659260 MtrunA17_Chr7g0248831 31.579 114 63 3 256 368 80 179 6.84e-13 66.6
Msa0659260 MtrunA17_Chr7g0237871 42.029 69 39 1 259 326 133 201 7.04e-13 67.8
Msa0659260 MtrunA17_Chr3g0081611 35.065 77 49 1 250 325 74 150 8.23e-13 66.2
Msa0659260 MtrunA17_Chr5g0409201 53.488 43 20 0 283 325 93 135 8.62e-13 65.9
Msa0659260 MtrunA17_Chr8g0388201 40.278 72 42 1 256 326 319 390 9.81e-13 68.9
Msa0659260 MtrunA17_Chr8g0366521 33.858 127 75 4 208 325 22 148 1.40e-12 67.8
Msa0659260 MtrunA17_Chr2g0300331 56.522 46 20 0 280 325 166 211 1.72e-12 66.6
Msa0659260 MtrunA17_Chr6g0451051 40.845 71 41 1 255 325 39 108 1.79e-12 64.7
Msa0659260 MtrunA17_Chr1g0157091 35.616 73 43 1 253 325 45 113 2.02e-12 63.9
Msa0659260 MtrunA17_Chr5g0406031 36.842 76 47 1 254 328 159 234 2.45e-12 66.2
Msa0659260 MtrunA17_Chr3g0124531 47.692 65 29 3 266 329 55 115 2.48e-12 64.3
Msa0659260 MtrunA17_Chr3g0126611 38.028 71 43 1 256 325 303 373 3.20e-12 67.4
Msa0659260 MtrunA17_Chr5g0444141 55.769 52 22 1 274 325 212 262 3.91e-12 65.9
Msa0659260 MtrunA17_Chr5g0396601 37.037 81 50 1 246 325 312 392 5.18e-12 66.6
Msa0659260 MtrunA17_Chr8g0345381 35.000 80 49 1 283 362 53 129 5.35e-12 63.2
Msa0659260 MtrunA17_Chr8g0343571 57.778 45 19 0 281 325 83 127 5.98e-12 63.5
Msa0659260 MtrunA17_Chr7g0275601 36.000 75 43 1 256 325 76 150 7.32e-12 63.2
Msa0659260 MtrunA17_Chr4g0065171 39.759 83 42 3 244 325 451 526 7.53e-12 66.6
Msa0659260 MtrunA17_Chr3g0117821 26.772 127 85 2 207 325 1 127 9.76e-12 62.4
Msa0659260 MtrunA17_Chr8g0369571 53.488 43 20 0 283 325 90 132 1.00e-11 63.2
Msa0659260 MtrunA17_Chr8g0345401 38.889 72 41 2 283 354 49 117 1.14e-11 62.0
Msa0659260 MtrunA17_Chr8g0369691 47.692 65 32 2 262 325 424 487 1.56e-11 65.5
Msa0659260 MtrunA17_Chr7g0274721 32.609 92 56 2 234 325 50 135 2.45e-11 62.0
Msa0659260 MtrunA17_Chr8g0388231 40.789 76 42 2 252 325 305 379 2.46e-11 64.7
Msa0659260 MtrunA17_Chr7g0261091 27.907 129 85 4 205 325 14 142 3.01e-11 63.9
Msa0659260 MtrunA17_Chr8g0347101 35.000 80 50 2 248 325 277 356 4.47e-11 63.5
Msa0659260 MtrunA17_Chr2g0317671 33.333 108 62 3 229 328 99 204 4.68e-11 61.6
Msa0659260 MtrunA17_Chr5g0397351 31.092 119 76 4 215 329 12 128 5.28e-11 60.1
Msa0659260 MtrunA17_Chr3g0118111 42.857 63 35 1 270 331 100 162 7.72e-11 60.8
Msa0659260 MtrunA17_Chr6g0451041 55.814 43 19 0 283 325 18 60 9.53e-11 58.2
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0659260 AT1G49230.1 49.765 213 89 4 159 367 21 219 6.97e-62 198
Msa0659260 AT1G49230.1 37.989 179 59 4 11 148 17 184 3.12e-30 115
Msa0659260 AT1G49200.1 48.585 212 90 5 165 368 24 224 1.85e-59 192
Msa0659260 AT1G49200.1 36.723 177 54 5 21 149 24 190 1.17e-25 103
Msa0659260 AT1G49220.1 50.739 203 81 5 165 359 23 214 2.34e-59 192
Msa0659260 AT1G49220.1 35.955 178 56 5 21 150 23 190 1.61e-27 109
Msa0659260 AT1G49210.1 50.000 212 87 4 165 368 23 223 3.42e-59 191
Msa0659260 AT1G49210.1 38.202 178 52 6 21 150 23 190 5.04e-27 107
Msa0659260 AT3G18773.1 48.309 207 92 4 165 368 24 218 8.65e-57 185
Msa0659260 AT3G18773.1 33.508 191 64 7 6 148 8 183 8.25e-22 92.8
Msa0659260 AT5G05280.1 52.857 140 58 3 201 339 37 169 2.60e-43 148
Msa0659260 AT5G05280.1 41.129 124 35 3 57 142 37 160 8.34e-19 83.6
Msa0659260 AT3G10910.1 49.624 133 62 2 201 329 29 160 6.00e-40 140
Msa0659260 AT3G10910.1 37.415 147 37 4 57 156 29 167 6.86e-19 84.0
Msa0659260 AT1G76410.1 43.624 149 81 3 187 334 10 156 1.22e-35 129
Msa0659260 AT1G76410.1 37.241 145 49 4 41 143 8 152 1.39e-18 83.2
Msa0659260 AT1G20823.1 45.113 133 68 2 201 329 26 157 2.07e-34 126
Msa0659260 AT1G20823.1 32.530 166 54 5 23 141 3 157 1.21e-16 78.2
Msa0659260 AT2G17450.1 40.972 144 64 5 202 336 25 156 1.52e-29 112
Msa0659260 AT5G01880.1 45.205 146 71 4 186 330 15 152 1.43e-28 109
Msa0659260 AT5G01880.1 35.088 114 39 4 66 151 53 159 1.08e-12 65.9
Msa0659260 AT5G47610.1 35.849 159 91 3 167 325 2 149 3.58e-28 108
Msa0659260 AT4G35480.1 39.333 150 71 5 202 336 23 167 4.94e-27 106
Msa0659260 AT4G17245.1 39.259 135 62 3 195 325 27 145 2.65e-24 98.2
Msa0659260 AT1G72200.1 31.977 172 95 5 189 355 47 201 1.99e-21 95.1
Msa0659260 AT3G05200.1 33.136 169 87 4 209 353 49 215 5.58e-20 90.9
Msa0659260 AT4G40070.1 33.121 157 94 4 208 358 49 200 3.47e-19 87.8
Msa0659260 AT2G35000.1 32.500 160 93 5 202 351 49 203 1.23e-17 84.0
Msa0659260 AT2G27940.1 39.080 87 51 1 250 336 109 193 2.00e-17 81.3
Msa0659260 AT1G72310.1 48.684 76 37 1 254 329 100 173 3.40e-17 82.0
Msa0659260 AT1G22500.1 31.111 135 90 2 197 329 31 164 4.87e-17 82.0
Msa0659260 AT2G25410.1 30.882 204 112 5 124 325 193 369 6.16e-17 81.6
Msa0659260 AT1G04360.1 31.061 132 80 3 205 325 45 176 6.45e-17 81.6
Msa0659260 AT3G14320.1 49.296 71 34 1 256 326 63 131 7.14e-17 79.0
Msa0659260 AT1G35330.1 32.283 127 78 3 210 328 48 174 1.07e-16 80.5
Msa0659260 AT1G53820.1 41.758 91 48 3 254 342 93 180 1.10e-16 80.5
Msa0659260 AT4G09120.1 33.065 124 75 2 207 328 51 168 1.79e-16 80.1
Msa0659260 AT1G23980.1 31.548 168 92 6 182 329 26 190 2.25e-16 80.1
Msa0659260 AT4G17920.1 34.307 137 73 5 205 328 23 155 2.39e-16 79.0
Msa0659260 AT3G16720.1 35.185 108 63 4 253 356 91 195 3.11e-16 79.0
Msa0659260 AT5G27420.1 45.122 82 41 2 252 330 91 171 3.63e-16 79.3
Msa0659260 AT4G09110.1 35.000 120 71 3 208 325 51 165 4.42e-16 78.6
Msa0659260 AT5G57750.1 41.096 73 43 0 254 326 93 165 4.51e-16 76.6
Msa0659260 AT2G20030.1 47.143 70 36 1 256 325 98 166 5.12e-16 79.3
Msa0659260 AT4G30400.1 43.056 72 41 0 254 325 105 176 1.11e-15 78.6
Msa0659260 AT4G09130.1 44.872 78 41 1 253 328 88 165 1.29e-15 77.8
Msa0659260 AT4G09100.1 40.506 79 45 2 249 325 49 127 1.44e-15 73.2
Msa0659260 AT2G46494.1 29.197 137 90 2 196 325 222 358 1.69e-15 77.4
Msa0659260 AT4G15975.1 38.043 92 55 1 237 328 32 121 1.95e-15 75.5
Msa0659260 AT4G17905.1 66.667 45 15 0 281 325 153 197 2.20e-15 76.6
Msa0659260 AT4G17905.2 66.667 45 15 0 281 325 179 223 2.38e-15 76.6
Msa0659260 AT2G34990.1 31.250 128 83 3 202 325 12 138 2.61e-15 76.3
Msa0659260 AT2G34990.2 31.250 128 83 3 202 325 34 160 3.09e-15 76.3
Msa0659260 AT4G28890.1 43.662 71 39 1 256 326 97 166 3.36e-15 77.0
Msa0659260 AT5G17600.1 43.056 72 40 1 254 325 114 184 3.52e-15 76.6
Msa0659260 AT1G28040.1 38.542 96 56 2 231 325 202 295 3.70e-15 75.9
Msa0659260 AT3G03550.1 59.184 49 20 0 281 329 157 205 4.35e-15 76.3
Msa0659260 AT1G74410.1 37.374 99 56 2 230 328 129 221 4.48e-15 74.3
Msa0659260 AT2G18650.1 43.421 76 43 0 254 329 97 172 5.53e-15 76.3
Msa0659260 AT4G10160.1 32.031 128 80 3 204 329 21 143 9.48e-15 73.2
Msa0659260 AT2G46493.1 38.750 80 48 1 247 325 101 180 3.64e-14 70.9
Msa0659260 AT1G32361.1 38.235 102 60 2 227 328 101 199 3.89e-14 73.2
Msa0659260 AT5G66070.5 41.558 77 42 2 252 328 148 221 4.00e-14 71.2
Msa0659260 AT5G66070.1 41.558 77 42 2 252 328 148 221 4.00e-14 71.2
Msa0659260 AT2G35420.1 43.056 72 40 1 254 325 75 145 4.77e-14 71.6
Msa0659260 AT5G05810.1 41.667 72 41 1 254 325 118 188 5.67e-14 73.2
Msa0659260 AT5G10380.1 40.541 74 43 1 256 329 109 181 6.34e-14 72.0
Msa0659260 AT5G66070.2 35.294 102 56 3 234 328 147 245 6.54e-14 71.2
Msa0659260 AT3G48030.2 37.333 75 47 0 254 328 100 174 9.24e-14 71.2
Msa0659260 AT2G35910.1 35.955 89 56 1 256 344 121 208 1.08e-13 70.1
Msa0659260 AT5G42200.1 37.500 80 49 1 246 325 68 146 1.11e-13 68.9
Msa0659260 AT3G19140.1 36.893 103 62 2 224 326 23 122 1.12e-13 68.2
Msa0659260 AT1G72220.1 57.778 45 19 0 281 325 175 219 1.15e-13 72.4
Msa0659260 AT4G33565.1 43.662 71 38 1 281 349 215 285 1.62e-13 71.6
Msa0659260 AT5G07040.1 34.568 81 51 2 248 326 57 137 1.71e-13 68.2
Msa0659260 AT3G48030.1 37.333 75 47 0 254 328 178 252 1.89e-13 71.2
Msa0659260 AT2G46495.1 32.258 124 77 4 206 325 242 362 2.34e-13 71.2
Msa0659260 AT3G62690.1 37.374 99 50 3 262 358 93 181 2.83e-13 69.7
Msa0659260 AT5G06490.1 39.474 76 40 1 256 325 96 171 2.88e-13 68.6
Msa0659260 AT2G46495.2 35.849 106 64 3 223 325 230 334 4.70e-13 70.1
Msa0659260 AT4G10150.1 27.439 164 100 6 171 329 8 157 5.38e-13 68.6
Msa0659260 AT2G46160.1 34.043 94 55 1 245 331 93 186 7.47e-13 67.8
Msa0659260 AT2G46160.2 34.043 94 55 1 245 331 93 186 7.47e-13 67.8
Msa0659260 AT5G53110.1 39.437 71 42 1 256 325 302 372 8.44e-13 69.3
Msa0659260 AT5G58580.1 40.789 76 45 0 254 329 109 184 9.33e-13 68.6
Msa0659260 AT5G43420.1 26.573 143 83 3 205 325 38 180 1.06e-12 68.9
Msa0659260 AT2G34000.1 27.972 143 98 3 205 344 11 151 1.20e-12 65.5
Msa0659260 AT3G18930.2 37.349 83 43 2 256 329 120 202 1.28e-12 68.9
Msa0659260 AT3G18930.3 37.349 83 43 2 256 329 120 202 1.28e-12 68.9
Msa0659260 AT3G18930.1 37.349 83 43 2 256 329 120 202 1.28e-12 68.9
Msa0659260 AT3G61550.1 29.861 144 75 4 231 364 80 207 1.56e-12 66.6
Msa0659260 AT1G33480.1 30.189 106 69 3 252 356 71 172 1.74e-12 67.4
Msa0659260 AT2G47560.1 33.846 130 80 2 197 325 26 150 2.73e-12 66.2
Msa0659260 AT5G36001.1 60.870 46 18 0 280 325 261 306 2.80e-12 67.4
Msa0659260 AT5G46650.1 27.451 153 99 3 188 328 8 160 2.91e-12 67.0
Msa0659260 AT2G18670.1 34.667 75 49 0 251 325 78 152 3.51e-12 65.1
Msa0659260 AT5G40250.1 50.000 48 24 0 282 329 142 189 4.06e-12 67.4
Msa0659260 AT3G11110.1 40.278 72 43 0 254 325 78 149 4.68e-12 63.9
Msa0659260 AT4G35840.1 38.750 80 41 2 254 328 160 236 7.47e-12 65.1
Msa0659260 AT2G17730.1 30.556 108 68 2 221 326 137 239 7.53e-12 65.1
Msa0659260 AT2G42360.1 38.028 71 44 0 255 325 80 150 4.25e-11 62.8
Msa0659260 AT4G26400.2 44.118 68 30 2 258 325 223 282 5.29e-11 63.9
Msa0659260 AT4G26400.1 44.118 68 30 2 258 325 223 282 5.29e-11 63.9
Msa0659260 AT2G42350.1 37.333 75 45 1 251 325 70 142 6.29e-11 62.0
Msa0659260 AT4G26580.1 35.484 93 54 2 241 328 242 333 7.39e-11 63.2
Msa0659260 AT4G26580.2 35.484 93 54 2 241 328 242 333 7.39e-11 63.2
Msa0659260 AT1G53010.1 27.811 169 71 5 205 331 19 178 8.79e-11 60.8

Find 74 sgRNAs with CRISPR-Local

Find 342 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TGAGTTGAAACTTCCAAATT+TGG 0.155862 4_3:-69544023 Msa0659260:CDS
AATTCAACTAACTCGTATTT+TGG 0.157335 4_3:-69548883 Msa0659260:CDS
AATTCAACAGACTCATATTT+TGG 0.174625 4_3:-69544271 Msa0659260:CDS
ATTGATAATCAATTGGATTT+TGG 0.213343 4_3:+69548941 None:intergenic
TTGCATTAAACTCCATTATT+AGG 0.219252 4_3:-69544180 Msa0659260:CDS
AATATGAGTCTGTTGAATTA+TGG 0.225131 4_3:+69544275 None:intergenic
TTTCTTCTTGATTCCTTTGT+TGG 0.230023 4_3:+69548699 None:intergenic
ACACACTCTGTATCCAAATT+TGG 0.282885 4_3:+69544010 None:intergenic
GTTGATGATGGCTACGTTTA+GGG 0.291505 4_3:+69548765 None:intergenic
CGTTGATGATGGCTACGTTT+AGG 0.307492 4_3:+69548764 None:intergenic
TGGATCGTTATAATAGTTTC+TGG 0.322018 4_3:+69543797 None:intergenic
CCTGCGACCCACCAATCTTC+TGG 0.323463 4_3:+69543843 None:intergenic
TGAAAACCATGGTTGCATTT+AGG 0.347715 4_3:+69543941 None:intergenic
GTTAGTGATTGATGATCAAC+TGG 0.362794 4_3:+69544322 None:intergenic
CTTGAAACTTGCCAGAAGAT+TGG 0.367066 4_3:-69543854 Msa0659260:CDS
TAGTTACGCTCCAAAGCTTC+AGG 0.368913 4_3:+69543764 None:intergenic
CCTTAAGGCACACCTAATAA+TGG 0.377306 4_3:+69544168 None:intergenic
TGGAAACCATGATTGCATTT+AGG 0.379959 4_3:+69548559 None:intergenic
ACTAGAAGAGTCGTTGTTGA+TGG 0.380702 4_3:+69544132 None:intergenic
AAGCTTTGGAGCGTAACTAT+AGG 0.382409 4_3:-69543760 Msa0659260:CDS
GAGACTTGTCGAAAGATTGT+TGG 0.388982 4_3:-69548469 Msa0659260:CDS
ACCACTAGAACCTGAAGCTT+TGG 0.391611 4_3:-69543774 Msa0659260:CDS
CAGCAACTCTTCACCTCAAT+TGG 0.392775 4_3:-69548722 Msa0659260:CDS
CCATTATTAGGTGTGCCTTA+AGG 0.397999 4_3:-69544168 Msa0659260:CDS
TCTGGCACTGGCAACACAAT+TGG 0.406141 4_3:+69543815 None:intergenic
AAGGAGGCACTGTCTGCACT+TGG 0.408731 4_3:+69548492 None:intergenic
GTTGGTGATTGATAATCAAT+TGG 0.420758 4_3:+69548934 None:intergenic
TTGTGGTTGTGTGTGAGAAC+AGG 0.421574 4_3:+69548904 None:intergenic
ATGTTCGTTGCATTGACAAA+TGG 0.437642 4_3:-69543919 Msa0659260:CDS
AGCTTTGGAGCGTAACTATA+GGG 0.446064 4_3:-69543759 Msa0659260:CDS
ATGTTCGTTGCATCGACAAA+TGG 0.447158 4_3:-69548537 Msa0659260:CDS
CAGCAATCCTTCACCTCAAT+CGG 0.461316 4_3:-69544104 Msa0659260:CDS
GTTATAATAGTTTCTGGCAC+TGG 0.477505 4_3:+69543803 None:intergenic
AAGCTTCAGGTTCTAGTGGT+TGG 0.485771 4_3:+69543777 None:intergenic
TTGCATTGACAAATGGCTAA+AGG 0.492896 4_3:-69543912 Msa0659260:CDS
GTGTGTGAGAACAGGGGAGC+TGG 0.495001 4_3:+69548912 None:intergenic
TTGTTGACCGATTGAGGTGA+AGG 0.495226 4_3:+69544097 None:intergenic
ATTCCTTTGTTGGCCAATTG+AGG 0.496903 4_3:+69548709 None:intergenic
GGCTACGTTTGAAAACCTTA+AGG 0.504858 4_3:+69544153 None:intergenic
AGGAGGCACTGTCTGCACTT+GGG 0.504991 4_3:+69548493 None:intergenic
ATTCCTTTGTTGACCGATTG+AGG 0.506390 4_3:+69544091 None:intergenic
GGAGGCACTGTCTGCACTTG+GGG 0.507612 4_3:+69548494 None:intergenic
GATTCCGGCACTGGCAACAT+AGG 0.508387 4_3:+69548430 None:intergenic
TTGTGGAATCTCACACAAGA+AGG 0.511006 4_3:-69544360 Msa0659260:CDS
TTGTAGAATCTCACACAAGA+AGG 0.511006 4_3:-69548972 Msa0659260:CDS
CGAAGAAGAGTCGTTGATGA+TGG 0.512398 4_3:+69548753 None:intergenic
CCAGAAGATTGGTGGGTCGC+AGG 0.513680 4_3:-69543843 Msa0659260:CDS
AATACGAGTTAGTTGAATTG+TGG 0.518921 4_3:+69548887 None:intergenic
AAGAAGGCACTGTCTACACT+TGG 0.527278 4_3:+69543874 None:intergenic
GAAACTTGCCAGAAGATTGG+TGG 0.537375 4_3:-69543851 Msa0659260:CDS
TGTGGTTGTGTGTGAGAACA+GGG 0.540709 4_3:+69548905 None:intergenic
ACTATTCAATGAGCTTCTTG+TGG 0.547062 4_3:-69544377 Msa0659260:intron
ATTTGTCGATGCAACGAACA+TGG 0.562919 4_3:+69548539 None:intergenic
TCTTCTGGCAAGTTTCAAGA+AGG 0.570889 4_3:+69543858 None:intergenic
GGCACTGGCAACATAGGAGG+CGG 0.574365 4_3:+69548436 None:intergenic
TCACCTCAATTGGCCAACAA+AGG 0.584640 4_3:-69548712 Msa0659260:CDS
TCCAAAGCTTCAGGTTCTAG+TGG 0.589399 4_3:+69543773 None:intergenic
TCCGGCACTGGCAACATAGG+AGG 0.592143 4_3:+69548433 None:intergenic
GAGATTCTACAAGAAGCTCA+TGG 0.595637 4_3:+69548983 None:intergenic
CAATCTTTCGACAAGTCTCA+AGG 0.597223 4_3:+69548473 None:intergenic
AAACTTGCCAGAAGATTGGT+GGG 0.608584 4_3:-69543850 Msa0659260:CDS
TCAGTTGAGTAGCTCACTGT+GGG 0.618570 4_3:+69544043 None:intergenic
ACAAGAAGCTCATGGAAGAG+TGG 0.629363 4_3:+69548991 None:intergenic
TCACCTCAATCGGTCAACAA+AGG 0.632009 4_3:-69544094 Msa0659260:CDS
GTGAGAACAGGGGAGCTGGT+TGG 0.655380 4_3:+69548916 None:intergenic
AGAAGGCACTGTCTACACTT+GGG 0.655706 4_3:+69543875 None:intergenic
AGCTCTCAAGACATTTCCCA+CGG 0.658312 4_3:-69548677 Msa0659260:intron
CTCAGTTGAGTAGCTCACTG+TGG 0.674782 4_3:+69544042 None:intergenic
TGTCTCTCAGAGTTCACGAA+GGG 0.679698 4_3:-69543983 Msa0659260:CDS
TGCAACGAACATGAAAACCA+TGG 0.695842 4_3:+69543930 None:intergenic
ATGTCTCTCAGAGTTCACGA+AGG 0.727660 4_3:-69543984 Msa0659260:CDS
TTAGTGATTGATGATCAACT+GGG 0.748243 4_3:+69544323 None:intergenic
GTGGTTGTGTGTGAGAACAG+GGG 0.771294 4_3:+69548906 None:intergenic
TCTTTCGACAAGTCTCAAGG+AGG 0.776052 4_3:+69548476 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAAAATAAAAAATAAAAAAT+TGG - chr4_3:69545650-69545669 Msa0659260:intron 0.0%
!! TAGTATAAGTTTATAATTAT+TGG - chr4_3:69545783-69545802 Msa0659260:intron 10.0%
!! TTTATAAAATAATTCATTTG+TGG + chr4_3:69546331-69546350 None:intergenic 10.0%
!!! TAAAAATATATACATTTTTG+GGG - chr4_3:69547009-69547028 Msa0659260:intron 10.0%
!! AATAAAACAAATATTTCATA+TGG - chr4_3:69547974-69547993 Msa0659260:intron 10.0%
!!! CTAATGTATATTTACTTTTA+GGG + chr4_3:69544473-69544492 None:intergenic 15.0%
!!! ACTAATGTATATTTACTTTT+AGG + chr4_3:69544474-69544493 None:intergenic 15.0%
!!! CAATATTAAAACTTTTGTAT+AGG - chr4_3:69544734-69544753 Msa0659260:intron 15.0%
!! ATTCAAGTAATAAAATGATT+TGG + chr4_3:69544760-69544779 None:intergenic 15.0%
!!! CATTTTTCTATTTACAATTA+TGG + chr4_3:69544807-69544826 None:intergenic 15.0%
!!! TTTTATATAAAGGGTAAATT+TGG + chr4_3:69545041-69545060 None:intergenic 15.0%
!!! ATCAATTTTTTCTTCTAAAT+CGG + chr4_3:69545378-69545397 None:intergenic 15.0%
!! TTTAGAAGAAAAAATTGATT+AGG - chr4_3:69545379-69545398 Msa0659260:intron 15.0%
!! ATTATAAACTTATACTAAAC+CGG + chr4_3:69545780-69545799 None:intergenic 15.0%
!!! ATCTATAAGAAAATATTTTG+TGG - chr4_3:69545822-69545841 Msa0659260:intron 15.0%
!!! TCTATAAGAAAATATTTTGT+GGG - chr4_3:69545823-69545842 Msa0659260:intron 15.0%
!!! TGGAATTTTTTATTATTTGT+AGG - chr4_3:69545877-69545896 Msa0659260:intron 15.0%
!!! GGAATTTTTTATTATTTGTA+GGG - chr4_3:69545878-69545897 Msa0659260:intron 15.0%
!!! GAATTTTTTATTATTTGTAG+GGG - chr4_3:69545879-69545898 Msa0659260:intron 15.0%
!! ACTATAATTAGAAATACTTT+GGG + chr4_3:69545940-69545959 None:intergenic 15.0%
!! TACTATAATTAGAAATACTT+TGG + chr4_3:69545941-69545960 None:intergenic 15.0%
!! AATAATTTAGGAATAAAACA+AGG + chr4_3:69546375-69546394 None:intergenic 15.0%
!!! TTTTATTCCTAAATTATTTG+TGG - chr4_3:69546377-69546396 Msa0659260:intron 15.0%
!! ATAGATGTCTTAAAATTATT+TGG + chr4_3:69547146-69547165 None:intergenic 15.0%
!! AATATATAATAAATCTTCGA+TGG - chr4_3:69547511-69547530 Msa0659260:intron 15.0%
!!! TATTGATTTTTTTAACTTCT+TGG + chr4_3:69547738-69547757 None:intergenic 15.0%
!! AATTTAAGTAATAAACAACT+AGG - chr4_3:69548169-69548188 Msa0659260:intron 15.0%
!! ATTTAAGTAATAAACAACTA+GGG - chr4_3:69548170-69548189 Msa0659260:intron 15.0%
!! ATTTAACTATTGCTATAATT+TGG + chr4_3:69548204-69548223 None:intergenic 15.0%
!!! ATTGATAATCAATTGGATTT+TGG + chr4_3:69543831-69543850 None:intergenic 20.0%
!!! AAAGTTTGAGATAAGAATAA+AGG - chr4_3:69544646-69544665 Msa0659260:intron 20.0%
!!! AAGTTTGAGATAAGAATAAA+GGG - chr4_3:69544647-69544666 Msa0659260:intron 20.0%
!!! AGAGGGTTATTTTATATAAA+GGG + chr4_3:69545050-69545069 None:intergenic 20.0%
!!! GGTTTGATTAATTACATTTT+TGG + chr4_3:69545320-69545339 None:intergenic 20.0%
!! AAAATGTAATTAATCAAACC+AGG - chr4_3:69545320-69545339 Msa0659260:intron 20.0%
!! TAGTGAATTAAAATTGCATA+TGG - chr4_3:69545547-69545566 Msa0659260:intron 20.0%
!! AAATATTCTCATAAGTATTC+CGG - chr4_3:69545758-69545777 Msa0659260:intron 20.0%
!!! CTATAAGAAAATATTTTGTG+GGG - chr4_3:69545824-69545843 Msa0659260:intron 20.0%
!!! TATAAGAAAATATTTTGTGG+GGG - chr4_3:69545825-69545844 Msa0659260:intron 20.0%
!! TAAACTAATGTGATAAAAAG+TGG - chr4_3:69546041-69546060 Msa0659260:intron 20.0%
!! TAAAATAATTCATTTGTGGA+CGG + chr4_3:69546327-69546346 None:intergenic 20.0%
!! AAAGTTTGAGTATTTATTGA+GGG + chr4_3:69546638-69546657 None:intergenic 20.0%
!! AAAAGTTTGAGTATTTATTG+AGG + chr4_3:69546639-69546658 None:intergenic 20.0%
!!! TGTCTTTTTCTTATAAAGTA+AGG - chr4_3:69546691-69546710 Msa0659260:intron 20.0%
!!! GTCTTTTTCTTATAAAGTAA+GGG - chr4_3:69546692-69546711 Msa0659260:intron 20.0%
!! ATTTGAAAGAATAGAAAACA+CGG + chr4_3:69546838-69546857 None:intergenic 20.0%
!!! AATTTGTTTTTTTAGGAGAA+AGG + chr4_3:69547207-69547226 None:intergenic 20.0%
!!! CTTATCGAATTTGTTTTTTT+AGG + chr4_3:69547214-69547233 None:intergenic 20.0%
!! TTTAAATAAGTTAAAGGTTG+AGG - chr4_3:69547554-69547573 Msa0659260:intron 20.0%
!! TTAAATAAGTTAAAGGTTGA+GGG - chr4_3:69547555-69547574 Msa0659260:intron 20.0%
!!! TTTCATGATTTTTTTTACCT+AGG + chr4_3:69547631-69547650 None:intergenic 20.0%
!! AGAGAAGAAAATTTATACTA+AGG + chr4_3:69547667-69547686 None:intergenic 20.0%
!! AAATATTTCATATGGCAAAA+GGG - chr4_3:69547982-69548001 Msa0659260:intron 20.0%
!!! AAAAGGGATTTAATTTGTTT+CGG - chr4_3:69547998-69548017 Msa0659260:intron 20.0%
!! GATCCAAACATATTATAATA+CGG - chr4_3:69548020-69548039 Msa0659260:intron 20.0%
!! ATACCGTATTATAATATGTT+TGG + chr4_3:69548026-69548045 None:intergenic 20.0%
!! AATTCAACTAACTCGTATTT+TGG - chr4_3:69543886-69543905 Msa0659260:CDS 25.0%
! TGAATCCTAATAATAGATTC+CGG + chr4_3:69544357-69544376 None:intergenic 25.0%
!! AAGCTTTTGAATGTAACTAT+AGG - chr4_3:69544391-69544410 Msa0659260:intron 25.0%
!! AGCTTTTGAATGTAACTATA+GGG - chr4_3:69544392-69544411 Msa0659260:intron 25.0%
!!! TGAAGGCATTTTTATATCAT+CGG + chr4_3:69544554-69544573 None:intergenic 25.0%
!!! GAGAGGGTTATTTTATATAA+AGG + chr4_3:69545051-69545070 None:intergenic 25.0%
! AAAAGAATACAATCATGGAA+GGG + chr4_3:69545075-69545094 None:intergenic 25.0%
! ATTGGAAAAGAATACAATCA+TGG + chr4_3:69545080-69545099 None:intergenic 25.0%
!! TGATTGTATTCTTTTCCAAT+CGG - chr4_3:69545080-69545099 Msa0659260:intron 25.0%
!!! TTTTTTTCCTGTAGCTATTT+TGG + chr4_3:69545204-69545223 None:intergenic 25.0%
!!! ATTTTTGGCTAAGTTTTTCT+GGG + chr4_3:69545305-69545324 None:intergenic 25.0%
! ATAAGTGATGAGGAAAAAAT+GGG - chr4_3:69545448-69545467 Msa0659260:intron 25.0%
!! AACACGTTGTGAAATAATTT+TGG + chr4_3:69545693-69545712 None:intergenic 25.0%
!!! ATTTTATCCCTTTTGTTGTT+TGG + chr4_3:69545857-69545876 None:intergenic 25.0%
! AACAACAAAAGGGATAAAAT+TGG - chr4_3:69545857-69545876 Msa0659260:intron 25.0%
!!! ACTGTTTTATAGTTCTAAGT+AGG - chr4_3:69545995-69546014 Msa0659260:intron 25.0%
!!! CTGTTTTATAGTTCTAAGTA+GGG - chr4_3:69545996-69546015 Msa0659260:intron 25.0%
! TATCATATAGGTTAATTGAG+CGG + chr4_3:69546247-69546266 None:intergenic 25.0%
!! TCTTTCCTTGTTATATAGAT+TGG + chr4_3:69546498-69546517 None:intergenic 25.0%
!! GGAGTACATATTTAGAATTT+AGG + chr4_3:69546549-69546568 None:intergenic 25.0%
!!! AAGTGACATTCATTTTGAAA+CGG + chr4_3:69546574-69546593 None:intergenic 25.0%
! AAATTTGACACTTATCAACA+AGG - chr4_3:69546893-69546912 Msa0659260:intron 25.0%
! GTTGTATATAAACCCTAAAA+CGG - chr4_3:69546960-69546979 Msa0659260:intron 25.0%
! GAAAACACTGTCAAATTAAA+AGG - chr4_3:69547068-69547087 Msa0659260:intron 25.0%
! GGATTCACTTATAGATATAT+AGG + chr4_3:69547186-69547205 None:intergenic 25.0%
! TAAGAGAGAAATTAAGAGAA+AGG + chr4_3:69547357-69547376 None:intergenic 25.0%
!!! TTGAATGTATCTTGATTTGT+TGG + chr4_3:69547441-69547460 None:intergenic 25.0%
! TGAGGGTTTAAATAAGTTAA+AGG - chr4_3:69547548-69547567 Msa0659260:intron 25.0%
! CTTAACATAACAATTAACCT+AGG - chr4_3:69547611-69547630 Msa0659260:intron 25.0%
! GAAAATTTATACTAAGGTCT+CGG + chr4_3:69547661-69547680 None:intergenic 25.0%
! AATTACAATCTTTATGCAAG+TGG + chr4_3:69547952-69547971 None:intergenic 25.0%
! CAAATATTTCATATGGCAAA+AGG - chr4_3:69547981-69548000 Msa0659260:intron 25.0%
! TATTATAATACGGTATAGCT+AGG - chr4_3:69548030-69548049 Msa0659260:intron 25.0%
! AAAATGTAGTGCATTCATAT+AGG - chr4_3:69548137-69548156 Msa0659260:intron 25.0%
!! TAGATGGGGTATTATATATA+GGG + chr4_3:69548278-69548297 None:intergenic 25.0%
!! TTAGATGGGGTATTATATAT+AGG + chr4_3:69548279-69548298 None:intergenic 25.0%
! ATTGAATAGTTGTGAAGTAA+AGG + chr4_3:69548382-69548401 None:intergenic 25.0%
!!! TGTTGAATTATGGTTTTTTG+TGG + chr4_3:69548487-69548506 None:intergenic 25.0%
! AATATGAGTCTGTTGAATTA+TGG + chr4_3:69548497-69548516 None:intergenic 25.0%
!! AATTCAACAGACTCATATTT+TGG - chr4_3:69548498-69548517 Msa0659260:CDS 25.0%
! TTGCATTAAACTCCATTATT+AGG - chr4_3:69548589-69548608 Msa0659260:intron 25.0%
!! GTTGGTGATTGATAATCAAT+TGG + chr4_3:69543838-69543857 None:intergenic 30.0%
AATACGAGTTAGTTGAATTG+TGG + chr4_3:69543885-69543904 None:intergenic 30.0%
AGCAAATAATAGCACACAAT+AGG + chr4_3:69543954-69543973 None:intergenic 30.0%
TTGCATTAAACTCCATTGTA+AGG - chr4_3:69543977-69543996 Msa0659260:CDS 30.0%
TTTCTTCTTGATTCCTTTGT+TGG + chr4_3:69544073-69544092 None:intergenic 30.0%
! ATTTTGCCTAAATGCAATCA+TGG - chr4_3:69544204-69544223 Msa0659260:CDS 30.0%
AGTTACATTCAAAAGCTTCA+TGG + chr4_3:69544389-69544408 None:intergenic 30.0%
!! ATTTTTCAACAACATTCTGC+AGG - chr4_3:69544513-69544532 Msa0659260:intron 30.0%
TTCTATCAAAGTCACTGATA+AGG + chr4_3:69544707-69544726 None:intergenic 30.0%
TTAATGGTTTGAGAGTCATA+TGG - chr4_3:69544851-69544870 Msa0659260:intron 30.0%
! CATATGGTTTGTGATCTTAA+TGG - chr4_3:69544867-69544886 Msa0659260:intron 30.0%
! GTAGTTTGTATGAAATGTTG+GGG + chr4_3:69545019-69545038 None:intergenic 30.0%
! GGTAGTTTGTATGAAATGTT+GGG + chr4_3:69545020-69545039 None:intergenic 30.0%
! TGGTAGTTTGTATGAAATGT+TGG + chr4_3:69545021-69545040 None:intergenic 30.0%
GAAAAGAATACAATCATGGA+AGG + chr4_3:69545076-69545095 None:intergenic 30.0%
!!! CATTTTTGGCTAAGTTTTTC+TGG + chr4_3:69545306-69545325 None:intergenic 30.0%
! GAAATTATCCAATTTTGCCA+TGG + chr4_3:69545356-69545375 None:intergenic 30.0%
!! CTTTCTGGTTCAAAACTAAA+AGG + chr4_3:69545423-69545442 None:intergenic 30.0%
CATAAGTGATGAGGAAAAAA+TGG - chr4_3:69545447-69545466 Msa0659260:intron 30.0%
TAAGTGATGAGGAAAAAATG+GGG - chr4_3:69545449-69545468 Msa0659260:intron 30.0%
GGCGATAAATAAATAGAACT+GGG - chr4_3:69545470-69545489 Msa0659260:intron 30.0%
!! AAATAGAACTGGGTTTTATG+TGG - chr4_3:69545480-69545499 Msa0659260:intron 30.0%
!! AATAGAACTGGGTTTTATGT+GGG - chr4_3:69545481-69545500 Msa0659260:intron 30.0%
! AAATTGTTGATGTGTTGTTG+TGG - chr4_3:69545580-69545599 Msa0659260:intron 30.0%
! AATTGTTGATGTGTTGTTGT+GGG - chr4_3:69545581-69545600 Msa0659260:intron 30.0%
AGAAAGAGAAGAAGATTAAG+AGG - chr4_3:69545624-69545643 Msa0659260:intron 30.0%
GAAAGAGAAGAAGATTAAGA+GGG - chr4_3:69545625-69545644 Msa0659260:intron 30.0%
AAAGAGAAGAAGATTAAGAG+GGG - chr4_3:69545626-69545645 Msa0659260:intron 30.0%
AATTATTTCACAACGTGTTC+TGG - chr4_3:69545694-69545713 Msa0659260:intron 30.0%
ATTATTTCACAACGTGTTCT+GGG - chr4_3:69545695-69545714 Msa0659260:intron 30.0%
TTTATTATTTGTAGGGGTGA+TGG - chr4_3:69545885-69545904 Msa0659260:intron 30.0%
!!! TATAGTTCTAAGTAGGGTTT+TGG - chr4_3:69546002-69546021 Msa0659260:intron 30.0%
ATCATATAGGTTAATTGAGC+GGG + chr4_3:69546246-69546265 None:intergenic 30.0%
GGATCTTAATGCTATCATAT+AGG + chr4_3:69546259-69546278 None:intergenic 30.0%
! TGACTAGCCACAAATAATTT+AGG + chr4_3:69546387-69546406 None:intergenic 30.0%
GATCTCCAATCTATATAACA+AGG - chr4_3:69546490-69546509 Msa0659260:intron 30.0%
GTATTTATTGAGGGTAAAGT+TGG + chr4_3:69546629-69546648 None:intergenic 30.0%
! TTTGACAGTGTTTTCTTTAG+AGG + chr4_3:69547063-69547082 None:intergenic 30.0%
ACACTGTCAAATTAAAAGGT+AGG - chr4_3:69547072-69547091 Msa0659260:intron 30.0%
TCAAATTAAAAGGTAGGCTA+TGG - chr4_3:69547078-69547097 Msa0659260:intron 30.0%
! AAGAATTAAGTGTTGTCAAG+AGG - chr4_3:69547115-69547134 Msa0659260:intron 30.0%
ATCAAGATACATTCAAGTAG+TGG - chr4_3:69547445-69547464 Msa0659260:intron 30.0%
! ATAAATTTTCTTCTCTTCCG+CGG - chr4_3:69547671-69547690 Msa0659260:intron 30.0%
! TCTTGGCTTGATTATAACAA+TGG + chr4_3:69547721-69547740 None:intergenic 30.0%
! TTTTATAGGGAAAATGCTTG+TGG + chr4_3:69547792-69547811 None:intergenic 30.0%
TCCTAACAACTGATCAAATT+GGG + chr4_3:69547891-69547910 None:intergenic 30.0%
TTCCTAACAACTGATCAAAT+TGG + chr4_3:69547892-69547911 None:intergenic 30.0%
TTGGTATGTTATCTTAGATG+GGG + chr4_3:69548292-69548311 None:intergenic 30.0%
GTTGGTATGTTATCTTAGAT+GGG + chr4_3:69548293-69548312 None:intergenic 30.0%
TGTTGGTATGTTATCTTAGA+TGG + chr4_3:69548294-69548313 None:intergenic 30.0%
GAGTTAGTTAATTAGAGCTT+GGG + chr4_3:69548318-69548337 None:intergenic 30.0%
TGAGTTAGTTAATTAGAGCT+TGG + chr4_3:69548319-69548338 None:intergenic 30.0%
!!! AGCATACATGTTTTTTCTTG+AGG + chr4_3:69548352-69548371 None:intergenic 30.0%
! TTAGTGATTGATGATCAACT+GGG + chr4_3:69548449-69548468 None:intergenic 30.0%
!!! TATGGTTTTTTGTGGAAACA+GGG + chr4_3:69548479-69548498 None:intergenic 30.0%
!!! TTATGGTTTTTTGTGGAAAC+AGG + chr4_3:69548480-69548499 None:intergenic 30.0%
! TGAGTTGAAACTTCCAAATT+TGG - chr4_3:69548746-69548765 Msa0659260:CDS 30.0%
TGGATCGTTATAATAGTTTC+TGG + chr4_3:69548975-69548994 None:intergenic 30.0%
TTGTAGAATCTCACACAAGA+AGG - chr4_3:69543797-69543816 Msa0659260:CDS 35.0%
! TGAGTTGAAACTACCAAGTT+TGG - chr4_3:69544128-69544147 Msa0659260:CDS 35.0%
ATGTCTCTCAGATTTCACAA+AGG - chr4_3:69544167-69544186 Msa0659260:CDS 35.0%
TGTCTCTCAGATTTCACAAA+GGG - chr4_3:69544168-69544187 Msa0659260:CDS 35.0%
AGATTTCACAAAGGGTGAAA+AGG - chr4_3:69544176-69544195 Msa0659260:CDS 35.0%
TGGAAACCATGATTGCATTT+AGG + chr4_3:69544213-69544232 None:intergenic 35.0%
TAATCCAAGTGAGAGATTCT+TGG - chr4_3:69544622-69544641 Msa0659260:intron 35.0%
TTTACCAAGAATCTCTCACT+TGG + chr4_3:69544629-69544648 None:intergenic 35.0%
TCAAACCATTAAGATCACAG+CGG + chr4_3:69544843-69544862 None:intergenic 35.0%
GATCACATACTTTGTGTCTT+GGG + chr4_3:69544936-69544955 None:intergenic 35.0%
AAGTATGTGATCGTAAGTAG+CGG - chr4_3:69544944-69544963 Msa0659260:intron 35.0%
AAGTAGCGGTATCAAAGTAT+TGG - chr4_3:69544958-69544977 Msa0659260:intron 35.0%
GGGTTAAGGTATAAATGTAG+GGG + chr4_3:69544999-69545018 None:intergenic 35.0%
GGGGTTAAGGTATAAATGTA+GGG + chr4_3:69545000-69545019 None:intergenic 35.0%
TGGGGTTAAGGTATAAATGT+AGG + chr4_3:69545001-69545020 None:intergenic 35.0%
TGTATGAAATGTTGGGGTTA+AGG + chr4_3:69545013-69545032 None:intergenic 35.0%
CAAGCGGAAGTTATACTAAT+TGG + chr4_3:69545124-69545143 None:intergenic 35.0%
CAATTAGTATAACTTCCGCT+TGG - chr4_3:69545122-69545141 Msa0659260:intron 35.0%
!! ATGGTGATGACTGGTTTAAT+TGG + chr4_3:69545158-69545177 None:intergenic 35.0%
AACTTAGTCCATGGCAAAAT+TGG - chr4_3:69545345-69545364 Msa0659260:intron 35.0%
GGGCGATAAATAAATAGAAC+TGG - chr4_3:69545469-69545488 Msa0659260:intron 35.0%
!! ATAGAACTGGGTTTTATGTG+GGG - chr4_3:69545482-69545501 Msa0659260:intron 35.0%
! GGGTGCAGTTTAATAGTTTT+CGG - chr4_3:69545735-69545754 Msa0659260:intron 35.0%
GTGAAAGCCAAACAACAAAA+GGG - chr4_3:69545847-69545866 Msa0659260:intron 35.0%
! ATAGATCTCTTGTCGTTTGT+CGG + chr4_3:69546201-69546220 None:intergenic 35.0%
ATTTGTGGACGGTAATTGTT+AGG + chr4_3:69546316-69546335 None:intergenic 35.0%
! TCCAGTTTTCTTGATTTCTC+TGG - chr4_3:69546426-69546445 Msa0659260:intron 35.0%
ACCAGAGAAATCAAGAAAAC+TGG + chr4_3:69546430-69546449 None:intergenic 35.0%
GATCACTTAGTACTCATGTA+TGG + chr4_3:69546474-69546493 None:intergenic 35.0%
!!! GACATTCATTTTGAAACGGA+GGG + chr4_3:69546570-69546589 None:intergenic 35.0%
!!! TGACATTCATTTTGAAACGG+AGG + chr4_3:69546571-69546590 None:intergenic 35.0%
AAGTAAGGGCAGTTTAGTAA+AGG - chr4_3:69546706-69546725 Msa0659260:intron 35.0%
ATTGCACACAGATTAAGGAA+TGG + chr4_3:69546757-69546776 None:intergenic 35.0%
TTCCTTAATCTGTGTGCAAT+TGG - chr4_3:69546757-69546776 Msa0659260:intron 35.0%
TCCTTAATCTGTGTGCAATT+GGG - chr4_3:69546758-69546777 Msa0659260:intron 35.0%
! AAACGACACTCACTTTGAAA+CGG - chr4_3:69546783-69546802 Msa0659260:intron 35.0%
AGGGAGGACATTATTAAGTT+TGG - chr4_3:69546806-69546825 Msa0659260:intron 35.0%
GGGAGGACATTATTAAGTTT+GGG - chr4_3:69546807-69546826 Msa0659260:intron 35.0%
GGAGGACATTATTAAGTTTG+GGG - chr4_3:69546808-69546827 Msa0659260:intron 35.0%
GAGAGAAATTAAGAGAAAGG+TGG + chr4_3:69547354-69547373 None:intergenic 35.0%
! CTTTAAAAGCGATGCTTATG+TGG + chr4_3:69547488-69547507 None:intergenic 35.0%
!!! TAACACTTTTTCTCTTTGCC+AGG + chr4_3:69547588-69547607 None:intergenic 35.0%
TTATACTAAGGTCTCGGTTT+AGG + chr4_3:69547655-69547674 None:intergenic 35.0%
! TCTACAGCTGTGCTTTTATA+GGG + chr4_3:69547805-69547824 None:intergenic 35.0%
TCCCAATTTGATCAGTTGTT+AGG - chr4_3:69547887-69547906 Msa0659260:intron 35.0%
TACACATAGTATCATGTACG+AGG - chr4_3:69548076-69548095 Msa0659260:intron 35.0%
AAGATACCATATCCTACCAT+AGG - chr4_3:69548242-69548261 Msa0659260:intron 35.0%
TATACTCCTATGGTAGGATA+TGG + chr4_3:69548251-69548270 None:intergenic 35.0%
ATAGGGAAGTTATACTCCTA+TGG + chr4_3:69548261-69548280 None:intergenic 35.0%
! TTAATTAGAGCTTGGGTTGT+TGG + chr4_3:69548311-69548330 None:intergenic 35.0%
ACTATTCAATGAGCTTCTTG+TGG - chr4_3:69548392-69548411 Msa0659260:intron 35.0%
! GTTAGTGATTGATGATCAAC+TGG + chr4_3:69548450-69548469 None:intergenic 35.0%
!!! ATGGTTTTTTGTGGAAACAG+GGG + chr4_3:69548478-69548497 None:intergenic 35.0%
ACACACTCTGTATCCAAATT+TGG + chr4_3:69548762-69548781 None:intergenic 35.0%
! ATTTTGCCTAAATGCAACCA+TGG - chr4_3:69548822-69548841 Msa0659260:intron 35.0%
TGAAAACCATGGTTGCATTT+AGG + chr4_3:69548831-69548850 None:intergenic 35.0%
! ATGTTCGTTGCATTGACAAA+TGG - chr4_3:69548850-69548869 Msa0659260:CDS 35.0%
! TTGCATTGACAAATGGCTAA+AGG - chr4_3:69548857-69548876 Msa0659260:CDS 35.0%
!! GTTATAATAGTTTCTGGCAC+TGG + chr4_3:69548969-69548988 None:intergenic 35.0%
GAGATTCTACAAGAAGCTCA+TGG + chr4_3:69543789-69543808 None:intergenic 40.0%
!! GTTGATGATGGCTACGTTTA+GGG + chr4_3:69544007-69544026 None:intergenic 40.0%
ATTCCTTTGTTGGCCAATTG+AGG + chr4_3:69544063-69544082 None:intergenic 40.0%
ATACACTCTGCATCCAAACT+TGG + chr4_3:69544144-69544163 None:intergenic 40.0%
ATTTGTCGATGCAACGAACA+TGG + chr4_3:69544233-69544252 None:intergenic 40.0%
! ATGTTCGTTGCATCGACAAA+TGG - chr4_3:69544232-69544251 Msa0659260:CDS 40.0%
CAATCTTTCGACAAGTCTCA+AGG + chr4_3:69544299-69544318 None:intergenic 40.0%
GAGACTTGTCGAAAGATTGT+TGG - chr4_3:69544300-69544319 Msa0659260:CDS 40.0%
CTAATAATAGATTCCGGCAC+TGG + chr4_3:69544351-69544370 None:intergenic 40.0%
! CAGTGCCGGAATCTATTATT+AGG - chr4_3:69544349-69544368 Msa0659260:CDS 40.0%
TCAAAAGCTTCATGGTCTAG+TGG + chr4_3:69544381-69544400 None:intergenic 40.0%
CGATCACATACTTTGTGTCT+TGG + chr4_3:69544937-69544956 None:intergenic 40.0%
! GTATTCTTTTCCAATCGGTG+AGG - chr4_3:69545085-69545104 Msa0659260:intron 40.0%
! TTCTTTTCATCCTCACCGAT+TGG + chr4_3:69545098-69545117 None:intergenic 40.0%
!! GTGATGACTGGTTTAATTGG+AGG + chr4_3:69545155-69545174 None:intergenic 40.0%
! ATGCTTACTATGGTGATGAC+TGG + chr4_3:69545167-69545186 None:intergenic 40.0%
CATCACCATAGTAAGCATCA+TGG - chr4_3:69545169-69545188 Msa0659260:intron 40.0%
GACTTCCATGATGCTTACTA+TGG + chr4_3:69545177-69545196 None:intergenic 40.0%
GTCATCACCAAAATAGCTAC+AGG - chr4_3:69545194-69545213 Msa0659260:intron 40.0%
AACCAGGAAAACTTAGTCCA+TGG - chr4_3:69545336-69545355 Msa0659260:intron 40.0%
CATCACTTATGCTCACTTTC+TGG + chr4_3:69545438-69545457 None:intergenic 40.0%
GAAAGTGAGCATAAGTGATG+AGG - chr4_3:69545438-69545457 Msa0659260:intron 40.0%
!! TAGAACTGGGTTTTATGTGG+GGG - chr4_3:69545483-69545502 Msa0659260:intron 40.0%
! TGGGTTTCAAGTCTTCTTCA+AGG - chr4_3:69545714-69545733 Msa0659260:intron 40.0%
! GGGTTTCAAGTCTTCTTCAA+GGG - chr4_3:69545715-69545734 Msa0659260:intron 40.0%
GGTGAAAGCCAAACAACAAA+AGG - chr4_3:69545846-69545865 Msa0659260:intron 40.0%
!! GTTCTAAGTAGGGTTTTGGT+AGG - chr4_3:69546006-69546025 Msa0659260:intron 40.0%
GCGACGTGTGAATATATCTA+TGG + chr4_3:69546159-69546178 None:intergenic 40.0%
! TAGATCTCTTGTCGTTTGTC+GGG + chr4_3:69546200-69546219 None:intergenic 40.0%
ATAGCATTAAGATCCGACAG+TGG - chr4_3:69546264-69546283 Msa0659260:intron 40.0%
TAATTGTTAGGAGTAGGGCT+AGG + chr4_3:69546304-69546323 None:intergenic 40.0%
GACGGTAATTGTTAGGAGTA+GGG + chr4_3:69546309-69546328 None:intergenic 40.0%
ACCCAATTGCACACAGATTA+AGG + chr4_3:69546762-69546781 None:intergenic 40.0%
TCTCTCTTATCATCACTTGC+AGG - chr4_3:69547368-69547387 Msa0659260:intron 40.0%
TATCATCACTTGCAGGATGT+AGG - chr4_3:69547375-69547394 Msa0659260:intron 40.0%
TCTTCGATGGATAGCTTACT+TGG - chr4_3:69547524-69547543 Msa0659260:intron 40.0%
ATGGATAGCTTACTTGGTTG+AGG - chr4_3:69547530-69547549 Msa0659260:intron 40.0%
TGGATAGCTTACTTGGTTGA+GGG - chr4_3:69547531-69547550 Msa0659260:intron 40.0%
CAAACAGTGATTAGTAACCG+CGG + chr4_3:69547691-69547710 None:intergenic 40.0%
! CTCTACAGCTGTGCTTTTAT+AGG + chr4_3:69547806-69547825 None:intergenic 40.0%
ATACGGTATAGCTAGGAAAG+TGG - chr4_3:69548037-69548056 Msa0659260:intron 40.0%
TACGGTATAGCTAGGAAAGT+GGG - chr4_3:69548038-69548057 Msa0659260:intron 40.0%
CATAGTATCATGTACGAGGA+TGG - chr4_3:69548080-69548099 Msa0659260:intron 40.0%
GGAAGTTATACTCCTATGGT+AGG + chr4_3:69548257-69548276 None:intergenic 40.0%
TTGTGGAATCTCACACAAGA+AGG - chr4_3:69548409-69548428 Msa0659260:intron 40.0%
CCTTAAGGCACACCTAATAA+TGG + chr4_3:69548604-69548623 None:intergenic 40.0%
CCATTATTAGGTGTGCCTTA+AGG - chr4_3:69548601-69548620 Msa0659260:intron 40.0%
GGCTACGTTTGAAAACCTTA+AGG + chr4_3:69548619-69548638 None:intergenic 40.0%
ACTAGAAGAGTCGTTGTTGA+TGG + chr4_3:69548640-69548659 None:intergenic 40.0%
ATTCCTTTGTTGACCGATTG+AGG + chr4_3:69548681-69548700 None:intergenic 40.0%
TGCAACGAACATGAAAACCA+TGG + chr4_3:69548842-69548861 None:intergenic 40.0%
TCTTCTGGCAAGTTTCAAGA+AGG + chr4_3:69548914-69548933 None:intergenic 40.0%
CTTGAAACTTGCCAGAAGAT+TGG - chr4_3:69548915-69548934 Msa0659260:CDS 40.0%
AAACTTGCCAGAAGATTGGT+GGG - chr4_3:69548919-69548938 Msa0659260:CDS 40.0%
!! AAGCTTTGGAGCGTAACTAT+AGG - chr4_3:69549009-69549028 Msa0659260:CDS 40.0%
!! AGCTTTGGAGCGTAACTATA+GGG - chr4_3:69549010-69549029 Msa0659260:CDS 40.0%
ACAAGAAGCTCATGGAAGAG+TGG + chr4_3:69543781-69543800 None:intergenic 45.0%
TGTGGTTGTGTGTGAGAACA+GGG + chr4_3:69543867-69543886 None:intergenic 45.0%
TTGTGGTTGTGTGTGAGAAC+AGG + chr4_3:69543868-69543887 None:intergenic 45.0%
! GTTTAGGGCACACCTTACAA+TGG + chr4_3:69543992-69544011 None:intergenic 45.0%
!! CGTTGATGATGGCTACGTTT+AGG + chr4_3:69544008-69544027 None:intergenic 45.0%
! CGAAGAAGAGTCGTTGATGA+TGG + chr4_3:69544019-69544038 None:intergenic 45.0%
CAGCAACTCTTCACCTCAAT+TGG - chr4_3:69544047-69544066 Msa0659260:CDS 45.0%
TCACCTCAATTGGCCAACAA+AGG - chr4_3:69544057-69544076 Msa0659260:CDS 45.0%
AGCTCTCAAGACATTTCCCA+CGG - chr4_3:69544092-69544111 Msa0659260:CDS 45.0%
TCAGTTGAGTAGTTCACCGT+GGG + chr4_3:69544111-69544130 None:intergenic 45.0%
TCTTTCGACAAGTCTCAAGG+AGG + chr4_3:69544296-69544315 None:intergenic 45.0%
TAGAGCCGCTGTGATCTTAA+TGG - chr4_3:69544835-69544854 Msa0659260:intron 45.0%
! GGTATAAATGTAGGGGTGTG+AGG + chr4_3:69544992-69545011 None:intergenic 45.0%
ACAATCATGGAAGGGTGAGA+GGG + chr4_3:69545067-69545086 None:intergenic 45.0%
TACAATCATGGAAGGGTGAG+AGG + chr4_3:69545068-69545087 None:intergenic 45.0%
!! TGCCATGGACTAAGTTTTCC+TGG + chr4_3:69545341-69545360 None:intergenic 45.0%
!! AGAACTGGGTTTTATGTGGG+GGG - chr4_3:69545484-69545503 Msa0659260:intron 45.0%
! GGGTGATGGTACAACTGTTA+GGG - chr4_3:69545899-69545918 Msa0659260:intron 45.0%
GGTACAACTGTTAGGGTGTA+TGG - chr4_3:69545906-69545925 Msa0659260:intron 45.0%
TTACAGGTGCAAACCACTGT+CGG + chr4_3:69546280-69546299 None:intergenic 45.0%
GGACGGTAATTGTTAGGAGT+AGG + chr4_3:69546310-69546329 None:intergenic 45.0%
!! GACACTCACTTTGAAACGGA+GGG - chr4_3:69546787-69546806 Msa0659260:intron 45.0%
GCTCTGCAAAGAATGGAAGA+AGG + chr4_3:69546937-69546956 None:intergenic 45.0%
CAACTCTGCTCTGCAAAGAA+TGG + chr4_3:69546944-69546963 None:intergenic 45.0%
!! CCAAAAACGACGCCGTTTTA+GGG + chr4_3:69546975-69546994 None:intergenic 45.0%
!!! CCTAAAACGGCGTCGTTTTT+GGG - chr4_3:69546973-69546992 Msa0659260:intron 45.0%
!!! CTAAAACGGCGTCGTTTTTG+GGG - chr4_3:69546974-69546993 Msa0659260:intron 45.0%
!!! TATACATTTTTGGGGTGCCG+TGG - chr4_3:69547017-69547036 Msa0659260:intron 45.0%
! AAGGTTGAGGGTGTAAATCC+TGG - chr4_3:69547567-69547586 Msa0659260:intron 45.0%
! TTTTGTGGAAACAGGGGAGT+TGG + chr4_3:69548472-69548491 None:intergenic 45.0%
CAGCAATCCTTCACCTCAAT+CGG - chr4_3:69548665-69548684 Msa0659260:intron 45.0%
TTGTTGACCGATTGAGGTGA+AGG + chr4_3:69548675-69548694 None:intergenic 45.0%
TCACCTCAATCGGTCAACAA+AGG - chr4_3:69548675-69548694 Msa0659260:intron 45.0%
TCAGTTGAGTAGCTCACTGT+GGG + chr4_3:69548729-69548748 None:intergenic 45.0%
ATGTCTCTCAGAGTTCACGA+AGG - chr4_3:69548785-69548804 Msa0659260:intron 45.0%
TGTCTCTCAGAGTTCACGAA+GGG - chr4_3:69548786-69548805 Msa0659260:intron 45.0%
!! AGAAGGCACTGTCTACACTT+GGG + chr4_3:69548897-69548916 None:intergenic 45.0%
!! AAGAAGGCACTGTCTACACT+TGG + chr4_3:69548898-69548917 None:intergenic 45.0%
GAAACTTGCCAGAAGATTGG+TGG - chr4_3:69548918-69548937 Msa0659260:CDS 45.0%
! AAGCTTCAGGTTCTAGTGGT+TGG + chr4_3:69548995-69549014 None:intergenic 45.0%
ACCACTAGAACCTGAAGCTT+TGG - chr4_3:69548995-69549014 Msa0659260:CDS 45.0%
! TCCAAAGCTTCAGGTTCTAG+TGG + chr4_3:69548999-69549018 None:intergenic 45.0%
TAGTTACGCTCCAAAGCTTC+AGG + chr4_3:69549008-69549027 None:intergenic 45.0%
!!! TATAAAATTAAATTTTTTGA+AGG + chr4_3:69544571-69544590 None:intergenic 5.0%
!!! TATAAAAATATATACATTTT+TGG - chr4_3:69547007-69547026 Msa0659260:intron 5.0%
!!! ATAAAAATATATACATTTTT+GGG - chr4_3:69547008-69547027 Msa0659260:intron 5.0%
GTGGTTGTGTGTGAGAACAG+GGG + chr4_3:69543866-69543885 None:intergenic 50.0%
CTCAGTTGAGTAGTTCACCG+TGG + chr4_3:69544112-69544131 None:intergenic 50.0%
ATTGGAGGTAGACGACCAAG+CGG + chr4_3:69545140-69545159 None:intergenic 50.0%
! GGGGTGATGGTACAACTGTT+AGG - chr4_3:69545898-69545917 Msa0659260:intron 50.0%
AGGAGTAGGGCTAGGTTTAC+AGG + chr4_3:69546296-69546315 None:intergenic 50.0%
!! CGACACTCACTTTGAAACGG+AGG - chr4_3:69546786-69546805 Msa0659260:intron 50.0%
!! ACTCACTTTGAAACGGAGGG+AGG - chr4_3:69546790-69546809 Msa0659260:intron 50.0%
!! CCCTAAAACGGCGTCGTTTT+TGG - chr4_3:69546972-69546991 Msa0659260:intron 50.0%
!! CCCAAAAACGACGCCGTTTT+AGG + chr4_3:69546976-69546995 None:intergenic 50.0%
TTGAGAGCCACAAGATGCCA+CGG + chr4_3:69547037-69547056 None:intergenic 50.0%
ACTTGCAGGATGTAGGTGCA+AGG - chr4_3:69547382-69547401 Msa0659260:intron 50.0%
CTCAGTTGAGTAGCTCACTG+TGG + chr4_3:69548730-69548749 None:intergenic 50.0%
!! TCTGGCACTGGCAACACAAT+TGG + chr4_3:69548957-69548976 None:intergenic 50.0%
!! AGGAGGCACTGTCTGCACTT+GGG + chr4_3:69544279-69544298 None:intergenic 55.0%
!! AAGGAGGCACTGTCTGCACT+TGG + chr4_3:69544280-69544299 None:intergenic 55.0%
!! GATTCCGGCACTGGCAACAT+AGG + chr4_3:69544342-69544361 None:intergenic 55.0%
TACGAGGATGGTGCAGCATC+AGG - chr4_3:69548092-69548111 Msa0659260:intron 55.0%
GTGAGAACAGGGGAGCTGGT+TGG + chr4_3:69543856-69543875 None:intergenic 60.0%
GTGTGTGAGAACAGGGGAGC+TGG + chr4_3:69543860-69543879 None:intergenic 60.0%
!! GGAGGCACTGTCTGCACTTG+GGG + chr4_3:69544278-69544297 None:intergenic 60.0%
!! GGCACTGGCAACATAGGAGG+CGG + chr4_3:69544336-69544355 None:intergenic 60.0%
GCCTCCTATGTTGCCAGTGC+CGG - chr4_3:69544335-69544354 Msa0659260:CDS 60.0%
!! TCCGGCACTGGCAACATAGG+AGG + chr4_3:69544339-69544358 None:intergenic 60.0%
CCTGCGACCCACCAATCTTC+TGG + chr4_3:69548929-69548948 None:intergenic 60.0%
! CCAGAAGATTGGTGGGTCGC+AGG - chr4_3:69548926-69548945 Msa0659260:CDS 60.0%
!! TGGGGTGCCGTGGCATCTTG+TGG - chr4_3:69547027-69547046 Msa0659260:intron 65.0%
Chromosome Type Strat End Strand Name
chr4_3 gene 69543751 69549040 69543751 ID=Msa0659260;Name=Msa0659260
chr4_3 mRNA 69543751 69549040 69543751 ID=Msa0659260-mRNA-1;Parent=Msa0659260;Name=Msa0659260-mRNA-1;_AED=0.09;_eAED=0.09;_QI=0|0|0|1|0|0|4|0|369
chr4_3 exon 69548835 69549040 69548835 ID=Msa0659260-mRNA-1:exon:20439;Parent=Msa0659260-mRNA-1
chr4_3 exon 69548678 69548792 69548678 ID=Msa0659260-mRNA-1:exon:20438;Parent=Msa0659260-mRNA-1
chr4_3 exon 69548441 69548593 69548441 ID=Msa0659260-mRNA-1:exon:20437;Parent=Msa0659260-mRNA-1
chr4_3 exon 69543751 69544386 69543751 ID=Msa0659260-mRNA-1:exon:20436;Parent=Msa0659260-mRNA-1
chr4_3 CDS 69548835 69549040 69548835 ID=Msa0659260-mRNA-1:cds;Parent=Msa0659260-mRNA-1
chr4_3 CDS 69548678 69548792 69548678 ID=Msa0659260-mRNA-1:cds;Parent=Msa0659260-mRNA-1
chr4_3 CDS 69548441 69548593 69548441 ID=Msa0659260-mRNA-1:cds;Parent=Msa0659260-mRNA-1
chr4_3 CDS 69543751 69544386 69543751 ID=Msa0659260-mRNA-1:cds;Parent=Msa0659260-mRNA-1
Gene Sequence

>Msa0659260

ATGTATGCTTCTACTTCTTTTACTTCACCACTCTTCCATGAGCTTCTTGTAGAATCTCACACAAGAAGGTTGCTCTTCCAAAATCCAATTGATTATCAATCACCAACCAGCTCCCCTGTTCTCACACACAACCACAATTCAACTAACTCGTATTTTGGTGCTCGTGAGTTTGAATCAAATGTTGTGATGATAGTTGCTGTCCTATTGTGTGCCCTAAACGTAGCCATCATCAACGACTCTTCTTCGAGTTCTAGCAGCAACTCTTCACCTCAATTGGCCAACAAAGGAATCAAGAAGAAAGCTCTCAAGACATTTCCCACGGTGCGCATTTTGCCTAAATGCAATCATGGTTTCCATGTTCGTTGCATCGACAAATGGCTAAAAGCACATTCATCATGCCCCAAGTGCAGACAGTGCCTCCTTGAGACTTGTCGAAAGATTGTTGGATCAGAAGCACCGCCTCCTATGTTGCCACTTCTTGTGGAATCTCACACAAGAAGGTTACTCATTCAAAACCCAGTTGATCATCAATCACTAACCAACTCCCCTGTTTCCACAAAAAACCATAATTCAACAGACTCATATTTTGGAGCTCGTGAATTTGATTCAAAAGTTGTGATGATACTTGCAGTCATATTATGTGTTTTTATTTGCTCACTTGCATTAAACTCCATTATTAGGTGTGCCTTAAGGTTTTCAAACGTAGCCATCAACAACGACTCTTCTAGTTCAAACAGCAATCCTTCACCTCAATCGGTCAACAAAGGAATCAAGAAGAAAGCTCTCAAGACATTTCCCACAGTGAGCTACTCAACTGAGTTGAAACTTCCAAATTTGGATACAGAGTGTGTGATATGTCTCTCAGAGTTCACGAAGGGTGAAAAGATACGCATTTTGCCTAAATGCAACCATGGTTTTCATGTTCGTTGCATTGACAAATGGCTAAAGGAACACTCATCATGTCCCAAGTGTAGACAGTGCCTTCTTGAAACTTGCCAGAAGATTGGTGGGTCGCAGGTGCAACCAATTGTGTTGCCAGTGCCAGAAACTATTATAACGATCCAACCACTAGAACCTGAAGCTTTGGAGCGTAACTATAGGGAAATATAA
Protein sequence

>Msa0659260

MYASTSFTSPLFHELLVESHTRRLLFQNPIDYQSPTSSPVLTHNHNSTNSYFGAREFESNVVMIVAVLLCALNVAIINDSSSSSSSNSSPQLANKGIKKKALKTFPTVRILPKCNHGFHVRCIDKWLKAHSSCPKCRQCLLETCRKIVGSEAPPPMLPLLVESHTRRLLIQNPVDHQSLTNSPVSTKNHNSTDSYFGAREFDSKVVMILAVILCVFICSLALNSIIRCALRFSNVAINNDSSSSNSNPSPQSVNKGIKKKALKTFPTVSYSTELKLPNLDTECVICLSEFTKGEKIRILPKCNHGFHVRCIDKWLKEHSSCPKCRQCLLETCQKIGGSQVQPIVLPVPETIITIQPLEPEALERNYREI*