Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1401650 | XP_003608790.1 | 96.552 | 290 | 10 | 0 | 32 | 321 | 43 | 332 | 0.0 | 559 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1401650 | sp|Q8VYJ2|AHL1_ARATH | 68.382 | 272 | 67 | 12 | 61 | 318 | 89 | 355 | 1.18e-112 | 333 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1401650 | G7JK75 | 96.552 | 290 | 10 | 0 | 32 | 321 | 43 | 332 | 0.0 | 559 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0000220 | Msa1401650 | -0.800221 | 1.595284e-48 | -8.615850e-47 |
| Msa0010150 | Msa1401650 | 0.804119 | 2.517493e-49 | -8.615850e-47 |
| Msa0021710 | Msa1401650 | -0.810231 | 1.277298e-50 | -8.615850e-47 |
| Msa0031650 | Msa1401650 | 0.824808 | 6.604327e-54 | -8.615850e-47 |
| Msa0032450 | Msa1401650 | -0.823835 | 1.118453e-53 | -8.615850e-47 |
| Msa0036230 | Msa1401650 | 0.811451 | 6.955400e-51 | -8.615850e-47 |
| Msa0041780 | Msa1401650 | -0.800565 | 1.357835e-48 | -8.615850e-47 |
| Msa0057740 | Msa1401650 | -0.826369 | 2.817811e-54 | -8.615850e-47 |
| Msa0080620 | Msa1401650 | -0.825745 | 3.963745e-54 | -8.615850e-47 |
| Msa0087580 | Msa1401650 | -0.808418 | 3.128220e-50 | -8.615850e-47 |
| Msa0089510 | Msa1401650 | -0.801043 | 1.084490e-48 | -8.615850e-47 |
| Msa0089520 | Msa1401650 | -0.800171 | 1.633697e-48 | -8.615850e-47 |
| Msa0103060 | Msa1401650 | -0.811872 | 5.633364e-51 | -8.615850e-47 |
| Msa0120450 | Msa1401650 | 0.814523 | 1.475550e-51 | -8.615850e-47 |
| Msa1348330 | Msa1401650 | 0.836540 | 8.813930e-57 | -8.615850e-47 |
| Msa1357840 | Msa1401650 | 0.818329 | 2.074404e-52 | -8.615850e-47 |
| Msa1363690 | Msa1401650 | 0.806564 | 7.738288e-50 | -8.615850e-47 |
| Msa1377190 | Msa1401650 | 0.806866 | 6.678980e-50 | -8.615850e-47 |
| Msa1378950 | Msa1401650 | 0.836698 | 8.035719e-57 | -8.615850e-47 |
| Msa1384980 | Msa1401650 | -0.801411 | 9.117864e-49 | -8.615850e-47 |
| Msa1388070 | Msa1401650 | -0.810553 | 1.088528e-50 | -8.615850e-47 |
| Msa1401650 | Msa1406230 | -0.805711 | 1.169704e-49 | -8.615850e-47 |
| Msa1401650 | Msa1407210 | 0.820346 | 7.200435e-53 | -8.615850e-47 |
| Msa1401650 | Msa1409600 | 0.826625 | 2.447873e-54 | -8.615850e-47 |
| Msa1401650 | Msa1417220 | 0.824778 | 6.712519e-54 | -8.615850e-47 |
| Msa1401650 | Msa1445780 | 0.819182 | 1.328128e-52 | -8.615850e-47 |
| Msa1401650 | Msa1449600 | -0.816265 | 6.044256e-52 | -8.615850e-47 |
| Msa1401650 | Msa1451690 | -0.826435 | 2.716500e-54 | -8.615850e-47 |
| Msa1401650 | Msa1452200 | -0.806898 | 6.578752e-50 | -8.615850e-47 |
| Msa1401650 | Msa1456830 | -0.821725 | 3.465533e-53 | -8.615850e-47 |
| Msa1401650 | Msa1458270 | 0.806621 | 7.527050e-50 | -8.615850e-47 |
| Msa1401650 | Msa1461660 | 0.800768 | 1.234185e-48 | -8.615850e-47 |
| Msa0604280 | Msa1401650 | 0.829106 | 6.198044e-55 | -8.615850e-47 |
| Msa0605480 | Msa1401650 | 0.829902 | 3.968708e-55 | -8.615850e-47 |
| Msa0623750 | Msa1401650 | 0.800943 | 1.136694e-48 | -8.615850e-47 |
| Msa0624260 | Msa1401650 | -0.806501 | 7.977706e-50 | -8.615850e-47 |
| Msa0624360 | Msa1401650 | -0.804706 | 1.898936e-49 | -8.615850e-47 |
| Msa0630850 | Msa1401650 | -0.807857 | 4.117655e-50 | -8.615850e-47 |
| Msa0634290 | Msa1401650 | 0.829152 | 6.038981e-55 | -8.615850e-47 |
| Msa0638040 | Msa1401650 | -0.826756 | 2.277675e-54 | -8.615850e-47 |
| Msa0646440 | Msa1401650 | 0.816633 | 5.002059e-52 | -8.615850e-47 |
| Msa0659230 | Msa1401650 | 0.812408 | 4.303918e-51 | -8.615850e-47 |
| Msa0659260 | Msa1401650 | 0.807327 | 5.335521e-50 | -8.615850e-47 |
| Msa0667620 | Msa1401650 | 0.800623 | 1.321618e-48 | -8.615850e-47 |
| Msa0668210 | Msa1401650 | 0.807312 | 5.376571e-50 | -8.615850e-47 |
| Msa0677110 | Msa1401650 | -0.834066 | 3.716378e-56 | -8.615850e-47 |
| Msa0705050 | Msa1401650 | -0.821035 | 5.000933e-53 | -8.615850e-47 |
| Msa0705130 | Msa1401650 | -0.805314 | 1.416918e-49 | -8.615850e-47 |
| Msa0705240 | Msa1401650 | 0.806765 | 7.018550e-50 | -8.615850e-47 |
| Msa0716600 | Msa1401650 | 0.806000 | 1.017467e-49 | -8.615850e-47 |
| Msa0754790 | Msa1401650 | -0.804134 | 2.498992e-49 | -8.615850e-47 |
| Msa0758150 | Msa1401650 | 0.817084 | 3.960298e-52 | -8.615850e-47 |
| Msa0763350 | Msa1401650 | -0.821807 | 3.318192e-53 | -8.615850e-47 |
| Msa0776340 | Msa1401650 | 0.806876 | 6.647301e-50 | -8.615850e-47 |
| Msa0776590 | Msa1401650 | -0.818986 | 1.472109e-52 | -8.615850e-47 |
| Msa0782030 | Msa1401650 | -0.803127 | 4.043421e-49 | -8.615850e-47 |
| Msa0793060 | Msa1401650 | -0.838027 | 3.668938e-57 | -8.615850e-47 |
| Msa0796610 | Msa1401650 | -0.808559 | 2.918526e-50 | -8.615850e-47 |
| Msa0813630 | Msa1401650 | -0.804522 | 2.074552e-49 | -8.615850e-47 |
| Msa0817100 | Msa1401650 | 0.829411 | 5.225955e-55 | -8.615850e-47 |
| Msa0822370 | Msa1401650 | -0.816471 | 5.435883e-52 | -8.615850e-47 |
| Msa0827800 | Msa1401650 | 0.803385 | 3.575466e-49 | -8.615850e-47 |
| Msa0833910 | Msa1401650 | -0.813491 | 2.492110e-51 | -8.615850e-47 |
| Msa0834160 | Msa1401650 | -0.806135 | 9.528551e-50 | -8.615850e-47 |
| Msa0134300 | Msa1401650 | -0.809213 | 2.114411e-50 | -8.615850e-47 |
| Msa0134380 | Msa1401650 | -0.802689 | 4.979746e-49 | -8.615850e-47 |
| Msa0137010 | Msa1401650 | -0.822947 | 1.803585e-53 | -8.615850e-47 |
| Msa0139270 | Msa1401650 | 0.805231 | 1.474875e-49 | -8.615850e-47 |
| Msa0150910 | Msa1401650 | 0.801271 | 9.742024e-49 | -8.615850e-47 |
| Msa0153640 | Msa1401650 | -0.800046 | 1.732101e-48 | -8.615850e-47 |
| Msa0160470 | Msa1401650 | -0.801447 | 8.967442e-49 | -8.615850e-47 |
| Msa0160580 | Msa1401650 | 0.804460 | 2.137141e-49 | -8.615850e-47 |
| Msa0163690 | Msa1401650 | 0.809139 | 2.193511e-50 | -8.615850e-47 |
| Msa0171740 | Msa1401650 | 0.825779 | 3.891090e-54 | -8.615850e-47 |
| Msa0186510 | Msa1401650 | -0.835949 | 1.245351e-56 | -8.615850e-47 |
| Msa0195190 | Msa1401650 | 0.808081 | 3.690008e-50 | -8.615850e-47 |
| Msa0210880 | Msa1401650 | -0.801189 | 1.012534e-48 | -8.615850e-47 |
| Msa0218060 | Msa1401650 | 0.814827 | 1.263627e-51 | -8.615850e-47 |
| Msa0227290 | Msa1401650 | -0.811602 | 6.450729e-51 | -8.615850e-47 |
| Msa0234120 | Msa1401650 | 0.810880 | 9.249096e-51 | -8.615850e-47 |
| Msa1233620 | Msa1401650 | 0.845714 | 3.418823e-59 | -8.615850e-47 |
| Msa1246420 | Msa1401650 | -0.810836 | 9.456627e-51 | -8.615850e-47 |
| Msa1255710 | Msa1401650 | 0.805502 | 1.294183e-49 | -8.615850e-47 |
| Msa1258020 | Msa1401650 | 0.981714 | 2.885069e-153 | -8.615850e-47 |
| Msa1258100 | Msa1401650 | -0.826235 | 3.031769e-54 | -8.615850e-47 |
| Msa1266710 | Msa1401650 | 0.815485 | 9.026813e-52 | -8.615850e-47 |
| Msa1275840 | Msa1401650 | 0.851429 | 8.927314e-61 | -8.615850e-47 |
| Msa1283120 | Msa1401650 | -0.848299 | 6.696628e-60 | -8.615850e-47 |
| Msa1286660 | Msa1401650 | -0.819204 | 1.313005e-52 | -8.615850e-47 |
| Msa1295220 | Msa1401650 | -0.812728 | 3.662736e-51 | -8.615850e-47 |
| Msa1299310 | Msa1401650 | 0.806147 | 9.473230e-50 | -8.615850e-47 |
| Msa1314020 | Msa1401650 | 0.848714 | 5.140362e-60 | -8.615850e-47 |
| Msa1339490 | Msa1401650 | 0.805646 | 1.207394e-49 | -8.615850e-47 |
| Msa1342400 | Msa1401650 | -0.808144 | 3.578383e-50 | -8.615850e-47 |
| Msa0375430 | Msa1401650 | -0.802268 | 6.081694e-49 | -8.615850e-47 |
| Msa0378000 | Msa1401650 | -0.807336 | 5.313141e-50 | -8.615850e-47 |
| Msa0385770 | Msa1401650 | -0.818340 | 2.063257e-52 | -8.615850e-47 |
| Msa0403670 | Msa1401650 | -0.800325 | 1.519653e-48 | -8.615850e-47 |
| Msa0403720 | Msa1401650 | -0.802414 | 5.674597e-49 | -8.615850e-47 |
| Msa0404180 | Msa1401650 | -0.819016 | 1.449199e-52 | -8.615850e-47 |
| Msa0405040 | Msa1401650 | -0.800679 | 1.286788e-48 | -8.615850e-47 |
| Msa0409250 | Msa1401650 | 0.802523 | 5.387524e-49 | -8.615850e-47 |
| Msa0409490 | Msa1401650 | 0.800873 | 1.174753e-48 | -8.615850e-47 |
| Msa0414480 | Msa1401650 | 0.822369 | 2.457689e-53 | -8.615850e-47 |
| Msa0418150 | Msa1401650 | 0.802118 | 6.527776e-49 | -8.615850e-47 |
| Msa0426860 | Msa1401650 | -0.804317 | 2.289095e-49 | -8.615850e-47 |
| Msa0426890 | Msa1401650 | -0.804433 | 2.165313e-49 | -8.615850e-47 |
| Msa0444400 | Msa1401650 | 0.811089 | 8.332410e-51 | -8.615850e-47 |
| Msa0449360 | Msa1401650 | 0.812725 | 3.668609e-51 | -8.615850e-47 |
| Msa0456480 | Msa1401650 | -0.836011 | 1.201649e-56 | -8.615850e-47 |
| Msa0475360 | Msa1401650 | -0.813540 | 2.431138e-51 | -8.615850e-47 |
| Msa0986620 | Msa1401650 | -0.812861 | 3.426729e-51 | -8.615850e-47 |
| Msa0996980 | Msa1401650 | 0.841492 | 4.598130e-58 | -8.615850e-47 |
| Msa0996990 | Msa1401650 | 0.808135 | 3.593156e-50 | -8.615850e-47 |
| Msa1019220 | Msa1401650 | 0.815944 | 7.129950e-52 | -8.615850e-47 |
| Msa1019230 | Msa1401650 | 0.808045 | 3.755996e-50 | -8.615850e-47 |
| Msa1021600 | Msa1401650 | -0.813764 | 2.169787e-51 | -8.615850e-47 |
| Msa1024480 | Msa1401650 | 0.812410 | 4.299313e-51 | -8.615850e-47 |
| Msa1030430 | Msa1401650 | -0.820331 | 7.258119e-53 | -8.615850e-47 |
| Msa1036020 | Msa1401650 | 0.853970 | 1.680311e-61 | -8.615850e-47 |
| Msa1046220 | Msa1401650 | 0.821256 | 4.446866e-53 | -8.615850e-47 |
| Msa1061670 | Msa1401650 | 0.816511 | 5.324924e-52 | -8.615850e-47 |
| Msa1063260 | Msa1401650 | 0.819007 | 1.455879e-52 | -8.615850e-47 |
| Msa1064940 | Msa1401650 | 0.831024 | 2.110543e-55 | -8.615850e-47 |
| Msa1069440 | Msa1401650 | -0.861125 | 1.278147e-63 | -8.615850e-47 |
| Msa1076280 | Msa1401650 | 0.847455 | 1.143697e-59 | -8.615850e-47 |
| Msa1076520 | Msa1401650 | -0.802206 | 6.262174e-49 | -8.615850e-47 |
| Msa1099640 | Msa1401650 | 0.800800 | 1.215647e-48 | -8.615850e-47 |
| Msa1100330 | Msa1401650 | 0.801328 | 9.483204e-49 | -8.615850e-47 |
| Msa1103450 | Msa1401650 | 0.828061 | 1.108239e-54 | -8.615850e-47 |
| Msa1106960 | Msa1401650 | 0.804777 | 1.835211e-49 | -8.615850e-47 |
| Msa0245660 | Msa1401650 | 0.844657 | 6.599228e-59 | -8.615850e-47 |
| Msa0267710 | Msa1401650 | 0.812758 | 3.608912e-51 | -8.615850e-47 |
| Msa0270460 | Msa1401650 | -0.809143 | 2.188695e-50 | -8.615850e-47 |
| Msa0274260 | Msa1401650 | 0.813018 | 3.165241e-51 | -8.615850e-47 |
| Msa0278940 | Msa1401650 | 0.802533 | 5.361891e-49 | -8.615850e-47 |
| Msa0278960 | Msa1401650 | 0.811180 | 7.965832e-51 | -8.615850e-47 |
| Msa0301460 | Msa1401650 | -0.813720 | 2.218461e-51 | -8.615850e-47 |
| Msa0318370 | Msa1401650 | 0.804735 | 1.873241e-49 | -8.615850e-47 |
| Msa0322460 | Msa1401650 | 0.825765 | 3.922167e-54 | -8.615850e-47 |
| Msa0335340 | Msa1401650 | 0.807370 | 5.226403e-50 | -8.615850e-47 |
| Msa0338900 | Msa1401650 | -0.808625 | 2.825621e-50 | -8.615850e-47 |
| Msa0356200 | Msa1401650 | 0.862372 | 5.311376e-64 | -8.615850e-47 |
| Msa0356240 | Msa1401650 | 0.834491 | 2.906799e-56 | -8.615850e-47 |
| Msa0356250 | Msa1401650 | 0.836140 | 1.114072e-56 | -8.615850e-47 |
| Msa0356270 | Msa1401650 | 0.802778 | 4.772789e-49 | -8.615850e-47 |
| Msa0356320 | Msa1401650 | 0.809510 | 1.825717e-50 | -8.615850e-47 |
| Msa0356380 | Msa1401650 | 0.855113 | 7.845711e-62 | -8.615850e-47 |
| Msa0356410 | Msa1401650 | 0.859991 | 2.818380e-63 | -8.615850e-47 |
| Msa0364010 | Msa1401650 | -0.800952 | 1.132094e-48 | -8.615850e-47 |
| Msa1107320 | Msa1401650 | 0.817560 | 3.095735e-52 | -8.615850e-47 |
| Msa1109540 | Msa1401650 | 0.800711 | 1.267963e-48 | -8.615850e-47 |
| Msa1115900 | Msa1401650 | 0.804261 | 2.351725e-49 | -8.615850e-47 |
| Msa1121580 | Msa1401650 | -0.811605 | 6.439246e-51 | -8.615850e-47 |
| Msa1122550 | Msa1401650 | 0.853212 | 2.775023e-61 | -8.615850e-47 |
| Msa1124440 | Msa1401650 | -0.805653 | 1.203213e-49 | -8.615850e-47 |
| Msa1130070 | Msa1401650 | -0.802170 | 6.370173e-49 | -8.615850e-47 |
| Msa1130660 | Msa1401650 | -0.814422 | 1.553587e-51 | -8.615850e-47 |
| Msa1130730 | Msa1401650 | -0.811981 | 5.334493e-51 | -8.615850e-47 |
| Msa1131300 | Msa1401650 | -0.812139 | 4.926049e-51 | -8.615850e-47 |
| Msa1133440 | Msa1401650 | -0.825788 | 3.872091e-54 | -8.615850e-47 |
| Msa1138110 | Msa1401650 | 0.812518 | 4.073253e-51 | -8.615850e-47 |
| Msa1138600 | Msa1401650 | -0.841379 | 4.925384e-58 | -8.615850e-47 |
| Msa1150860 | Msa1401650 | 0.804881 | 1.745600e-49 | -8.615850e-47 |
| Msa1156270 | Msa1401650 | -0.800170 | 1.634222e-48 | -8.615850e-47 |
| Msa1157310 | Msa1401650 | -0.800034 | 1.741938e-48 | -8.615850e-47 |
| Msa1160540 | Msa1401650 | 0.818008 | 2.452343e-52 | -8.615850e-47 |
| Msa1161160 | Msa1401650 | -0.803877 | 2.826375e-49 | -8.615850e-47 |
| Msa1163340 | Msa1401650 | 0.841694 | 4.068433e-58 | -8.615850e-47 |
| Msa1168130 | Msa1401650 | -0.802954 | 4.389312e-49 | -8.615850e-47 |
| Msa1173410 | Msa1401650 | -0.806706 | 7.221025e-50 | -8.615850e-47 |
| Msa1179190 | Msa1401650 | 0.820060 | 8.374320e-53 | -8.615850e-47 |
| Msa1187810 | Msa1401650 | -0.835116 | 2.023849e-56 | -8.615850e-47 |
| Msa1190090 | Msa1401650 | 0.919362 | 4.949879e-87 | -8.615850e-47 |
| Msa1190140 | Msa1401650 | 0.814643 | 1.387679e-51 | -8.615850e-47 |
| Msa1190300 | Msa1401650 | -0.806444 | 8.201353e-50 | -8.615850e-47 |
| Msa1190320 | Msa1401650 | -0.806842 | 6.759434e-50 | -8.615850e-47 |
| Msa1211160 | Msa1401650 | 0.809285 | 2.040479e-50 | -8.615850e-47 |
| Msa1211320 | Msa1401650 | 0.806713 | 7.195388e-50 | -8.615850e-47 |
| Msa1219780 | Msa1401650 | 0.828026 | 1.129876e-54 | -8.615850e-47 |
| Msa1223620 | Msa1401650 | 0.804485 | 2.112253e-49 | -8.615850e-47 |
| Msa0497060 | Msa1401650 | -0.809179 | 2.150427e-50 | -8.615850e-47 |
| Msa0511600 | Msa1401650 | -0.817536 | 3.134746e-52 | -8.615850e-47 |
| Msa0514260 | Msa1401650 | -0.805575 | 1.249352e-49 | -8.615850e-47 |
| Msa0515830 | Msa1401650 | -0.802068 | 6.686007e-49 | -8.615850e-47 |
| Msa0521940 | Msa1401650 | 0.803926 | 2.760255e-49 | -8.615850e-47 |
| Msa0532660 | Msa1401650 | 0.810528 | 1.101954e-50 | -8.615850e-47 |
| Msa0533510 | Msa1401650 | 0.801475 | 8.846065e-49 | -8.615850e-47 |
| Msa0535570 | Msa1401650 | 0.803474 | 3.427329e-49 | -8.615850e-47 |
| Msa0538440 | Msa1401650 | 0.830170 | 3.415310e-55 | -8.615850e-47 |
| Msa0538450 | Msa1401650 | 0.804361 | 2.241395e-49 | -8.615850e-47 |
| Msa0538520 | Msa1401650 | 0.804350 | 2.252918e-49 | -8.615850e-47 |
| Msa0538530 | Msa1401650 | 0.819400 | 1.184670e-52 | -8.615850e-47 |
| Msa0549330 | Msa1401650 | -0.803213 | 3.881518e-49 | -8.615850e-47 |
| Msa0549970 | Msa1401650 | 0.835702 | 1.438871e-56 | -8.615850e-47 |
| Msa0550770 | Msa1401650 | -0.804547 | 2.049637e-49 | -8.615850e-47 |
| Msa0550800 | Msa1401650 | -0.809909 | 1.498825e-50 | -8.615850e-47 |
| Msa0554660 | Msa1401650 | 0.820782 | 5.719114e-53 | -8.615850e-47 |
| Msa0568940 | Msa1401650 | 0.801779 | 7.666471e-49 | -8.615850e-47 |
| Msa0589740 | Msa1401650 | 0.811125 | 8.187610e-51 | -8.615850e-47 |
| Msa0591490 | Msa1401650 | 0.823053 | 1.703368e-53 | -8.615850e-47 |
| Msa0844100 | Msa1401650 | -0.802284 | 6.034715e-49 | -8.615850e-47 |
| Msa0861800 | Msa1401650 | -0.802896 | 4.512934e-49 | -8.615850e-47 |
| Msa0890210 | Msa1401650 | 0.812668 | 3.775703e-51 | -8.615850e-47 |
| Msa0896920 | Msa1401650 | 0.874290 | 7.580561e-68 | -8.615850e-47 |
| Msa0896950 | Msa1401650 | 0.810664 | 1.029937e-50 | -8.615850e-47 |
| Msa0899730 | Msa1401650 | -0.800471 | 1.419379e-48 | -8.615850e-47 |
| Msa0912110 | Msa1401650 | -0.814219 | 1.722363e-51 | -8.615850e-47 |
| Msa0913500 | Msa1401650 | 0.827403 | 1.595353e-54 | -8.615850e-47 |
| Msa0932900 | Msa1401650 | 0.812308 | 4.525192e-51 | -8.615850e-47 |
| Msa0951060 | Msa1401650 | 0.809489 | 1.844729e-50 | -8.615850e-47 |
| Msa0962290 | Msa1401650 | 0.816953 | 4.238447e-52 | -8.615850e-47 |
| Msa0962320 | Msa1401650 | 0.838905 | 2.177975e-57 | -8.615850e-47 |
| Msa0967540 | Msa1401650 | -0.819202 | 1.314172e-52 | -8.615850e-47 |
| Msa0970790 | Msa1401650 | 0.812465 | 4.183079e-51 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1401650 | MtrunA17_Chr4g0056761 | 96.552 | 290 | 10 | 0 | 32 | 321 | 43 | 332 | 0.0 | 559 |
| Msa1401650 | MtrunA17_Chr7g0245841 | 58.929 | 280 | 87 | 7 | 61 | 319 | 60 | 332 | 1.30e-81 | 250 |
| Msa1401650 | MtrunA17_Chr8g0351761 | 53.147 | 286 | 106 | 3 | 61 | 319 | 71 | 355 | 8.20e-73 | 229 |
| Msa1401650 | MtrunA17_Chr1g0188211 | 58.547 | 234 | 74 | 8 | 57 | 271 | 42 | 271 | 2.39e-69 | 219 |
| Msa1401650 | MtrunA17_Chr5g0398621 | 50.813 | 246 | 81 | 5 | 32 | 273 | 30 | 239 | 6.90e-65 | 204 |
| Msa1401650 | MtrunA17_Chr1g0179461 | 49.321 | 221 | 99 | 7 | 61 | 273 | 69 | 284 | 3.97e-59 | 194 |
| Msa1401650 | MtrunA17_Chr6g0476061 | 52.232 | 224 | 88 | 7 | 53 | 265 | 43 | 258 | 2.74e-56 | 185 |
| Msa1401650 | MtrunA17_Chr8g0349091 | 50.952 | 210 | 94 | 4 | 54 | 262 | 82 | 283 | 2.19e-54 | 181 |
| Msa1401650 | MtrunA17_Chr5g0397551 | 49.515 | 206 | 91 | 6 | 61 | 266 | 70 | 262 | 2.20e-51 | 172 |
| Msa1401650 | MtrunA17_Chr8g0386741 | 42.857 | 259 | 124 | 5 | 5 | 262 | 58 | 293 | 5.70e-51 | 172 |
| Msa1401650 | MtrunA17_Chr4g0054661 | 46.330 | 218 | 101 | 7 | 38 | 250 | 51 | 257 | 1.39e-45 | 158 |
| Msa1401650 | MtrunA17_Chr7g0247431 | 41.935 | 279 | 135 | 8 | 50 | 316 | 80 | 343 | 1.88e-45 | 157 |
| Msa1401650 | MtrunA17_Chr7g0274821 | 43.939 | 198 | 104 | 2 | 59 | 256 | 72 | 262 | 7.92e-34 | 127 |
| Msa1401650 | MtrunA17_Chr1g0190011 | 38.942 | 208 | 116 | 4 | 43 | 249 | 25 | 222 | 8.31e-34 | 126 |
| Msa1401650 | MtrunA17_Chr4g0027371 | 51.908 | 131 | 59 | 3 | 122 | 249 | 8 | 137 | 3.00e-33 | 122 |
| Msa1401650 | MtrunA17_Chr4g0027331 | 53.600 | 125 | 54 | 3 | 122 | 243 | 8 | 131 | 3.77e-33 | 119 |
| Msa1401650 | MtrunA17_Chr4g0027351 | 55.263 | 114 | 47 | 2 | 132 | 244 | 18 | 128 | 2.28e-31 | 114 |
| Msa1401650 | MtrunA17_Chr6g0476241 | 41.509 | 212 | 101 | 8 | 48 | 258 | 107 | 296 | 2.38e-31 | 119 |
| Msa1401650 | MtrunA17_Chr4g0027301 | 45.968 | 124 | 65 | 2 | 123 | 244 | 16 | 139 | 6.57e-26 | 100 |
| Msa1401650 | MtrunA17_Chr1g0165101 | 35.897 | 234 | 115 | 9 | 39 | 249 | 57 | 278 | 1.93e-25 | 104 |
| Msa1401650 | MtrunA17_Chr5g0417581 | 40.559 | 143 | 64 | 4 | 124 | 249 | 10 | 148 | 2.47e-23 | 95.5 |
| Msa1401650 | MtrunA17_Chr5g0398591 | 43.548 | 124 | 60 | 2 | 185 | 307 | 11 | 125 | 2.67e-22 | 90.5 |
| Msa1401650 | MtrunA17_Chr3g0133051 | 38.710 | 124 | 74 | 2 | 133 | 255 | 101 | 223 | 1.19e-19 | 87.4 |
| Msa1401650 | MtrunA17_Chr3g0112131 | 43.548 | 124 | 65 | 2 | 136 | 259 | 109 | 227 | 3.33e-19 | 86.3 |
| Msa1401650 | MtrunA17_Chr5g0427311 | 38.806 | 134 | 73 | 4 | 134 | 261 | 81 | 211 | 3.62e-18 | 82.0 |
| Msa1401650 | MtrunA17_Chr5g0443311 | 30.804 | 224 | 129 | 3 | 60 | 266 | 10 | 224 | 7.18e-17 | 79.0 |
| Msa1401650 | MtrunA17_Chr3g0086021 | 36.496 | 137 | 75 | 4 | 116 | 249 | 94 | 221 | 2.86e-16 | 77.8 |
| Msa1401650 | MtrunA17_Chr1g0168121 | 41.129 | 124 | 68 | 2 | 136 | 259 | 72 | 190 | 2.92e-16 | 77.4 |
| Msa1401650 | MtrunA17_Chr4g0054651 | 43.860 | 114 | 60 | 1 | 136 | 249 | 106 | 215 | 1.12e-15 | 76.3 |
| Msa1401650 | MtrunA17_Chr7g0250031 | 45.614 | 114 | 58 | 1 | 136 | 249 | 87 | 196 | 2.93e-15 | 74.7 |
| Msa1401650 | MtrunA17_Chr5g0400531 | 39.535 | 129 | 66 | 5 | 64 | 188 | 123 | 243 | 3.52e-15 | 73.9 |
| Msa1401650 | MtrunA17_Chr5g0398531 | 42.105 | 114 | 62 | 1 | 136 | 249 | 130 | 239 | 2.55e-14 | 72.4 |
| Msa1401650 | MtrunA17_Chr8g0351651 | 43.860 | 114 | 60 | 1 | 136 | 249 | 116 | 225 | 3.77e-14 | 72.0 |
| Msa1401650 | MtrunA17_Chr1g0190051 | 40.351 | 114 | 64 | 1 | 136 | 249 | 104 | 213 | 5.73e-13 | 68.6 |
| Msa1401650 | MtrunA17_Chr5g0398601 | 57.143 | 70 | 30 | 0 | 211 | 280 | 5 | 74 | 8.01e-13 | 68.9 |
| Msa1401650 | MtrunA17_Chr5g0435681 | 39.024 | 123 | 70 | 2 | 137 | 259 | 120 | 237 | 4.49e-12 | 65.9 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1401650 | AT4G12080.1 | 68.382 | 272 | 67 | 12 | 61 | 318 | 89 | 355 | 1.20e-113 | 333 |
| Msa1401650 | AT4G22770.2 | 59.328 | 268 | 97 | 7 | 59 | 318 | 70 | 333 | 2.26e-86 | 263 |
| Msa1401650 | AT4G22770.1 | 59.328 | 268 | 97 | 7 | 59 | 318 | 70 | 333 | 2.26e-86 | 263 |
| Msa1401650 | AT4G25320.1 | 59.420 | 207 | 71 | 5 | 61 | 257 | 86 | 289 | 6.63e-72 | 228 |
| Msa1401650 | AT5G62260.1 | 55.752 | 226 | 84 | 6 | 50 | 263 | 65 | 286 | 2.35e-68 | 219 |
| Msa1401650 | AT5G62260.3 | 55.752 | 226 | 84 | 6 | 50 | 263 | 65 | 286 | 2.35e-68 | 219 |
| Msa1401650 | AT5G51590.1 | 55.455 | 220 | 69 | 4 | 61 | 252 | 78 | 296 | 1.89e-64 | 209 |
| Msa1401650 | AT5G62260.2 | 54.930 | 213 | 83 | 5 | 50 | 250 | 65 | 276 | 3.12e-64 | 205 |
| Msa1401650 | AT4G00200.2 | 60.280 | 214 | 58 | 8 | 61 | 263 | 56 | 253 | 5.34e-59 | 192 |
| Msa1401650 | AT4G00200.1 | 60.280 | 214 | 58 | 8 | 61 | 263 | 56 | 253 | 5.34e-59 | 192 |
| Msa1401650 | AT2G33620.1 | 50.435 | 230 | 98 | 7 | 59 | 287 | 95 | 309 | 7.33e-58 | 190 |
| Msa1401650 | AT2G33620.4 | 50.435 | 230 | 98 | 7 | 59 | 287 | 95 | 309 | 7.33e-58 | 190 |
| Msa1401650 | AT2G33620.2 | 50.435 | 230 | 98 | 7 | 59 | 287 | 95 | 309 | 7.33e-58 | 190 |
| Msa1401650 | AT2G33620.3 | 50.435 | 230 | 98 | 7 | 59 | 287 | 95 | 309 | 7.33e-58 | 190 |
| Msa1401650 | AT1G63470.1 | 52.062 | 194 | 87 | 4 | 61 | 252 | 105 | 294 | 3.77e-55 | 184 |
| Msa1401650 | AT2G45850.1 | 49.754 | 203 | 93 | 3 | 48 | 250 | 85 | 278 | 7.90e-53 | 177 |
| Msa1401650 | AT2G45850.2 | 49.754 | 203 | 93 | 3 | 48 | 250 | 85 | 278 | 7.90e-53 | 177 |
| Msa1401650 | AT3G61310.1 | 53.403 | 191 | 77 | 5 | 61 | 250 | 101 | 280 | 1.43e-50 | 171 |
| Msa1401650 | AT1G63480.5 | 47.291 | 203 | 94 | 4 | 61 | 263 | 93 | 282 | 6.07e-50 | 170 |
| Msa1401650 | AT1G63480.7 | 47.291 | 203 | 94 | 4 | 61 | 263 | 93 | 282 | 6.07e-50 | 170 |
| Msa1401650 | AT1G63480.4 | 47.291 | 203 | 94 | 4 | 61 | 263 | 93 | 282 | 6.07e-50 | 170 |
| Msa1401650 | AT1G63480.3 | 47.291 | 203 | 94 | 4 | 61 | 263 | 93 | 282 | 6.07e-50 | 170 |
| Msa1401650 | AT1G63480.6 | 47.291 | 203 | 94 | 4 | 61 | 263 | 93 | 282 | 6.07e-50 | 170 |
| Msa1401650 | AT1G63480.2 | 47.291 | 203 | 94 | 4 | 61 | 263 | 99 | 288 | 6.18e-50 | 170 |
| Msa1401650 | AT1G63480.1 | 47.291 | 203 | 94 | 4 | 61 | 263 | 99 | 288 | 6.18e-50 | 170 |
| Msa1401650 | AT2G45850.3 | 49.239 | 197 | 91 | 3 | 48 | 244 | 85 | 272 | 1.24e-49 | 167 |
| Msa1401650 | AT4G17950.1 | 39.837 | 246 | 103 | 7 | 61 | 274 | 131 | 363 | 8.91e-43 | 153 |
| Msa1401650 | AT5G46640.1 | 43.882 | 237 | 97 | 7 | 34 | 251 | 78 | 297 | 2.80e-40 | 145 |
| Msa1401650 | AT3G04590.1 | 43.229 | 192 | 99 | 3 | 59 | 250 | 103 | 284 | 2.22e-39 | 141 |
| Msa1401650 | AT3G04590.2 | 43.455 | 191 | 98 | 3 | 59 | 249 | 103 | 283 | 2.27e-38 | 140 |
| Msa1401650 | AT2G36560.1 | 42.975 | 121 | 68 | 1 | 130 | 249 | 102 | 222 | 3.25e-25 | 106 |
| Msa1401650 | AT3G60870.1 | 32.632 | 190 | 107 | 5 | 61 | 249 | 27 | 196 | 9.73e-19 | 84.7 |
| Msa1401650 | AT5G49700.1 | 36.765 | 136 | 82 | 3 | 133 | 264 | 83 | 218 | 7.92e-18 | 82.4 |
| Msa1401650 | AT1G14490.1 | 37.956 | 137 | 77 | 3 | 133 | 261 | 30 | 166 | 1.14e-16 | 77.8 |
| Msa1401650 | AT1G14490.2 | 37.956 | 137 | 77 | 3 | 133 | 261 | 49 | 185 | 1.28e-16 | 78.2 |
| Msa1401650 | AT2G42940.1 | 33.659 | 205 | 120 | 4 | 46 | 250 | 5 | 193 | 3.09e-16 | 77.4 |
| Msa1401650 | AT5G28590.1 | 41.322 | 121 | 46 | 3 | 129 | 249 | 26 | 121 | 5.48e-15 | 73.2 |
| Msa1401650 | AT4G14465.1 | 39.231 | 130 | 74 | 2 | 136 | 265 | 97 | 221 | 1.16e-14 | 73.6 |
| Msa1401650 | AT3G55560.1 | 41.228 | 114 | 64 | 1 | 136 | 249 | 118 | 228 | 2.25e-14 | 73.2 |
| Msa1401650 | AT4G17800.1 | 42.982 | 114 | 61 | 1 | 136 | 249 | 112 | 221 | 2.34e-14 | 72.8 |
| Msa1401650 | AT2G35270.1 | 38.462 | 130 | 75 | 2 | 136 | 265 | 108 | 232 | 3.98e-14 | 72.0 |
| Msa1401650 | AT1G76500.1 | 36.585 | 123 | 65 | 2 | 136 | 249 | 102 | 220 | 3.66e-13 | 69.3 |
| Msa1401650 | AT3G04570.1 | 39.344 | 122 | 62 | 2 | 136 | 249 | 110 | 227 | 4.85e-13 | 69.3 |
| Msa1401650 | AT4G22810.1 | 41.026 | 117 | 62 | 2 | 136 | 249 | 135 | 247 | 1.86e-11 | 64.7 |
| Msa1401650 | AT2G45430.1 | 41.525 | 118 | 61 | 3 | 136 | 249 | 119 | 232 | 2.57e-11 | 63.9 |
Find 106 sgRNAs with CRISPR-Local
Find 272 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CTTCGTCAGCCCGATTCTTC+TGG | 0.153062 | tig0022713:-22205 | Msa1401650:CDS |
| ACATCATGCTTCTGATTTCT+TGG | 0.217240 | tig0022713:+21364 | None:intergenic |
| GGAGTTTGGTTGTCTGTTCT+TGG | 0.245727 | tig0022713:+25470 | None:intergenic |
| TTTGAAATTCTGTCTTTATC+TGG | 0.274522 | tig0022713:-21978 | Msa1401650:CDS |
| CTTCCTCTCTTCTTCTTCTC+TGG | 0.315470 | tig0022713:+25338 | None:intergenic |
| TTCGTCAGCCCGATTCTTCT+GGG | 0.316075 | tig0022713:-22204 | Msa1401650:CDS |
| GATATTAATGTGTCTCTTCC+TGG | 0.316878 | tig0022713:-21202 | Msa1401650:CDS |
| CTTCCTTCCGTGGAGATAAT+TGG | 0.333200 | tig0022713:-21267 | Msa1401650:CDS |
| TGGAGGAGTAGCTGGTTTGT+TGG | 0.341681 | tig0022713:-21862 | Msa1401650:CDS |
| CATAAATGCATATATATATA+AGG | 0.342343 | tig0022713:+21159 | None:intergenic |
| TCCGCAACAACCGCCGTATA+CGG | 0.346397 | tig0022713:-25396 | Msa1401650:CDS |
| GTTCCTCCTCCACTTTCATT+TGG | 0.347793 | tig0022713:+21945 | None:intergenic |
| CTGATCCGGTGGTCGGAGTT+TGG | 0.366555 | tig0022713:+25456 | None:intergenic |
| AGGCGGCATGAGTGTGTCTT+TGG | 0.382271 | tig0022713:-21910 | Msa1401650:CDS |
| AGAAAATGAAATAACCTTCA+TGG | 0.401967 | tig0022713:+22288 | None:intergenic |
| GAATGGGTCCCTTGCTCTGT+TGG | 0.411486 | tig0022713:-22614 | Msa1401650:CDS |
| GGCGGTGGTAACGGCGTCTC+CGG | 0.413422 | tig0022713:-25375 | Msa1401650:CDS |
| GCCGCCGGTGATTGATTTCA+CGG | 0.413441 | tig0022713:-25240 | Msa1401650:CDS |
| TCCTGGAGGCTAATTTCATA+AGG | 0.419486 | tig0022713:-21185 | Msa1401650:exon |
| TTATCCTTTGCATCCGATGC+TGG | 0.421865 | tig0022713:+21235 | None:intergenic |
| TTTGTTTGTTTGTTGTGTTA+AGG | 0.439820 | tig0022713:-21082 | Msa1401650:three_prime_UTR |
| AAATTTGAGTTGGAAAATAT+AGG | 0.440668 | tig0022713:-25170 | Msa1401650:intron |
| GGAGGAACACGAAGCAGATC+AGG | 0.444348 | tig0022713:-21930 | Msa1401650:CDS |
| GTAAAACATGGAAAACTTGT+TGG | 0.455477 | tig0022713:+21038 | None:intergenic |
| GTATGCATTCTTTCAGCAAA+TGG | 0.463040 | tig0022713:-22247 | Msa1401650:CDS |
| AACGGAGCAGACGACGATAT+CGG | 0.463859 | tig0022713:+25263 | None:intergenic |
| TGGTGTTAGTGGTGGCGTTA+CGG | 0.465659 | tig0022713:-25531 | None:intergenic |
| TAAAAGCTGAACCGCTGATC+CGG | 0.473642 | tig0022713:+25442 | None:intergenic |
| AGTCCTGATGGACGTGTTGT+TGG | 0.482154 | tig0022713:-21885 | Msa1401650:CDS |
| GCCGTTACCACCGCCGTATA+CGG | 0.484752 | tig0022713:+25383 | None:intergenic |
| TTCTTGGCTTCTGCTCATGT+TGG | 0.484881 | tig0022713:+21380 | None:intergenic |
| GTTGTTGGTGGAGGAGTAGC+TGG | 0.488351 | tig0022713:-21870 | Msa1401650:CDS |
| CCACCAACAACACGTCCATC+AGG | 0.492937 | tig0022713:+21882 | None:intergenic |
| GAGCAAAACGAAATTTGAGT+TGG | 0.494483 | tig0022713:-25180 | Msa1401650:CDS |
| GTAGGGATGGGAACAACAGC+AGG | 0.496848 | tig0022713:+21322 | None:intergenic |
| CACATCATCACTGTTAATGC+TGG | 0.504861 | tig0022713:-22575 | Msa1401650:CDS |
| GATAGAATAAATACCTGCAC+TGG | 0.507918 | tig0022713:+21828 | None:intergenic |
| GAAGTTACTGATGATAGAAT+AGG | 0.508118 | tig0022713:+21286 | None:intergenic |
| TACTGGATCAAGAGTAGGGA+TGG | 0.511973 | tig0022713:+21309 | None:intergenic |
| GCAGACGACGATATCGGCTT+CGG | 0.515428 | tig0022713:+25269 | None:intergenic |
| TCCTTATGAAATTAGCCTCC+AGG | 0.516288 | tig0022713:+21184 | None:intergenic |
| AAATCAATCACCGGCGGCAA+CGG | 0.516482 | tig0022713:+25245 | None:intergenic |
| ATGTTAGGATGTTACCATGA+AGG | 0.517184 | tig0022713:-22302 | Msa1401650:intron |
| GTCGTCTGCTCCGTTGCCGC+CGG | 0.518072 | tig0022713:-25255 | Msa1401650:CDS |
| ACTGATGATAGAATAGGTAC+TGG | 0.519373 | tig0022713:+21292 | None:intergenic |
| CCTGATGGACGTGTTGTTGG+TGG | 0.524712 | tig0022713:-21882 | Msa1401650:CDS |
| AGGAAAGTGAGCTAACTACT+AGG | 0.524794 | tig0022713:+21104 | None:intergenic |
| AGGAGTAGCTGGTTTGTTGG+TGG | 0.526402 | tig0022713:-21859 | Msa1401650:CDS |
| AGTGGTGGCGTTACGGTGGT+CGG | 0.531800 | tig0022713:-25524 | Msa1401650:CDS |
| TCTGGCACCGTCGTAACTGC+CGG | 0.535791 | tig0022713:+25356 | None:intergenic |
| GCCGTATACGGCGGTGGTAA+CGG | 0.539445 | tig0022713:-25384 | Msa1401650:CDS |
| TCGTCAGCCCGATTCTTCTG+GGG | 0.541650 | tig0022713:-22203 | Msa1401650:CDS |
| CAGCATTAACAGTGATGATG+TGG | 0.544475 | tig0022713:+22576 | None:intergenic |
| ATAGGTACTGGATCAAGAGT+AGG | 0.547053 | tig0022713:+21304 | None:intergenic |
| GGTGGCTGCAAGTCCAGTGC+AGG | 0.550883 | tig0022713:-21841 | Msa1401650:intron |
| ATGCCAAATGAAAGTGGAGG+AGG | 0.551611 | tig0022713:-21948 | Msa1401650:CDS |
| GTGTCTTTGGCAAGTCCTGA+TGG | 0.556787 | tig0022713:-21897 | Msa1401650:CDS |
| TCGTTCATGCCAAATGAAAG+TGG | 0.559940 | tig0022713:-21954 | Msa1401650:CDS |
| GACAACCAAACTCCGACCAC+CGG | 0.563057 | tig0022713:-25461 | Msa1401650:CDS |
| AAATTTGAACCAACAGAGCA+AGG | 0.567744 | tig0022713:+22605 | None:intergenic |
| GCCGTATACGGCGGTTGTTG+CGG | 0.577945 | tig0022713:+25395 | None:intergenic |
| TAGGTACTGGATCAAGAGTA+GGG | 0.580504 | tig0022713:+21305 | None:intergenic |
| AACTCCGACCACCGGATCAG+CGG | 0.581732 | tig0022713:-25453 | Msa1401650:CDS |
| GACACATTAATATCAGCAGC+GGG | 0.589557 | tig0022713:+21211 | None:intergenic |
| GACAGGAACCTGGTAAAACA+TGG | 0.589646 | tig0022713:+21026 | None:intergenic |
| CATCACTGTTAATGCTGGAG+AGG | 0.596487 | tig0022713:-22570 | Msa1401650:intron |
| AATTTGAACCAACAGAGCAA+GGG | 0.597677 | tig0022713:+22606 | None:intergenic |
| ACAACCGCCGTATACGGCGG+TGG | 0.597858 | tig0022713:-25390 | Msa1401650:CDS |
| TTGGTCTGCTGTGCCAGCAT+CGG | 0.597910 | tig0022713:-21248 | Msa1401650:CDS |
| GGCGTCTCCGGCAGTTACGA+CGG | 0.598191 | tig0022713:-25363 | Msa1401650:CDS |
| GATGGACGTGTTGTTGGTGG+AGG | 0.601930 | tig0022713:-21879 | Msa1401650:CDS |
| ATTCTACAATGACAGGAACC+TGG | 0.603314 | tig0022713:+21016 | None:intergenic |
| GTATACGGCGGTTGTTGCGG+AGG | 0.606155 | tig0022713:+25398 | None:intergenic |
| TGTGCCAGCATCGGATGCAA+AGG | 0.609579 | tig0022713:-21239 | Msa1401650:CDS |
| TCATCAGTAACTTCCTTCCG+TGG | 0.610671 | tig0022713:-21277 | Msa1401650:CDS |
| GAAAGAATGCATACCGCTCG+AGG | 0.613852 | tig0022713:+22256 | None:intergenic |
| TCCGCCGTGAAATCAATCAC+CGG | 0.617619 | tig0022713:+25236 | None:intergenic |
| CATGGAAAACTTGTTGGTCA+CGG | 0.617686 | tig0022713:+21044 | None:intergenic |
| TGAACCGCTGATCCGGTGGT+CGG | 0.619667 | tig0022713:+25449 | None:intergenic |
| CCGAGAAAATATGCAGCGGA+TGG | 0.621272 | tig0022713:-25314 | Msa1401650:CDS |
| TTAACACAACAAACAAACAA+AGG | 0.622132 | tig0022713:+21084 | None:intergenic |
| GGTCGGATCAGATGCTCCGT+CGG | 0.623317 | tig0022713:-25507 | Msa1401650:CDS |
| TGTATCTACCAGGTAGTGGT+TGG | 0.624215 | tig0022713:-21421 | Msa1401650:intron |
| GTGCCAGAGAAGAAGAAGAG+AGG | 0.624418 | tig0022713:-25341 | Msa1401650:CDS |
| AGACCAATTATCTCCACGGA+AGG | 0.635192 | tig0022713:+21264 | None:intergenic |
| TTCTCAGCAAGGACCTCGAG+CGG | 0.641808 | tig0022713:-22269 | Msa1401650:CDS |
| AGCATTAACAGTGATGATGT+GGG | 0.643782 | tig0022713:+22577 | None:intergenic |
| ACTGGATCAAGAGTAGGGAT+GGG | 0.644029 | tig0022713:+21310 | None:intergenic |
| CAGCAGACCAATTATCTCCA+CGG | 0.646524 | tig0022713:+21260 | None:intergenic |
| GGAGCCACGTGGTACTCCGA+CGG | 0.654960 | tig0022713:+25491 | None:intergenic |
| GCAACAACCGCCGTATACGG+CGG | 0.658539 | tig0022713:-25393 | Msa1401650:CDS |
| AGACACATTAATATCAGCAG+CGG | 0.659162 | tig0022713:+21210 | None:intergenic |
| AACAACAGCAGGAGATGACA+CGG | 0.660123 | tig0022713:+21333 | None:intergenic |
| AGCGGATGGTTCAGTGACAG+CGG | 0.663385 | tig0022713:-25300 | Msa1401650:CDS |
| GGAACACGAAGCAGATCAGG+CGG | 0.674892 | tig0022713:-21927 | Msa1401650:CDS |
| AAGAAATCAGAAGCATGATG+TGG | 0.682976 | tig0022713:-21362 | Msa1401650:CDS |
| ATTAATGTGTCTCTTCCTGG+AGG | 0.686956 | tig0022713:-21199 | Msa1401650:CDS |
| GTTACCACCGCCGTATACGG+CGG | 0.693943 | tig0022713:+25386 | None:intergenic |
| TGTTAGTGGTGGCGTTACGG+TGG | 0.696342 | tig0022713:-25528 | None:intergenic |
| GCCGTGAAATCAATCACCGG+CGG | 0.714414 | tig0022713:+25239 | None:intergenic |
| AAGACCGAGAAAATATGCAG+CGG | 0.716009 | tig0022713:-25318 | Msa1401650:CDS |
| TTCATGCCAAATGAAAGTGG+AGG | 0.721594 | tig0022713:-21951 | Msa1401650:CDS |
| TGCTCCGTCGGAGTACCACG+TGG | 0.724270 | tig0022713:-25495 | Msa1401650:CDS |
| GCATTAACAGTGATGATGTG+GGG | 0.743775 | tig0022713:+22578 | None:intergenic |
| TGTCTGTTCTTGGAGCCACG+TGG | 0.751370 | tig0022713:+25480 | None:intergenic |
| GCCGGTGATTGATTTCACGG+CGG | 0.764503 | tig0022713:-25237 | Msa1401650:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TTACAAAAAAAAAAAAACTA+TGG | + | tig0022713:21745-21764 | None:intergenic | 10.0% |
| !!! | TCTATTTTATATTTTACTAA+TGG | - | tig0022713:23118-23137 | Msa1401650:intron | 10.0% |
| !! | AATTAAAAGTTAAACAAAAA+GGG | + | tig0022713:23407-23426 | None:intergenic | 10.0% |
| !! | AAATATTCAAATTCTTAATT+TGG | - | tig0022713:23820-23839 | Msa1401650:intron | 10.0% |
| !!! | TTTTTTGTAGAATAAAATTA+GGG | - | tig0022713:24079-24098 | Msa1401650:intron | 10.0% |
| !! | TAATTAGATAGTATCAATTA+AGG | + | tig0022713:22477-22496 | None:intergenic | 15.0% |
| !! | AGAATATTGAAAATTGAATT+TGG | + | tig0022713:22636-22655 | None:intergenic | 15.0% |
| !! | GAATTAAAAGTTAAACAAAA+AGG | + | tig0022713:23408-23427 | None:intergenic | 15.0% |
| !!! | TTTGTAATTCTCTAAAAATT+TGG | - | tig0022713:23514-23533 | Msa1401650:intron | 15.0% |
| !!! | TGTTAACATTTACATTTTTT+AGG | - | tig0022713:23912-23931 | Msa1401650:intron | 15.0% |
| !!! | GTTTTTTGTAGAATAAAATT+AGG | - | tig0022713:24078-24097 | Msa1401650:intron | 15.0% |
| !! | CATAAATGCATATATATATA+AGG | + | tig0022713:25394-25413 | None:intergenic | 15.0% |
| !!! | AAATTTGAGTTGGAAAATAT+AGG | - | tig0022713:21380-21399 | Msa1401650:CDS | 20.0% |
| !! | GAAAGACTTAAATATTATTG+CGG | - | tig0022713:21888-21907 | Msa1401650:CDS | 20.0% |
| !! | AAAGACTTAAATATTATTGC+GGG | - | tig0022713:21889-21908 | Msa1401650:CDS | 20.0% |
| !!! | CAATTGTCAATTTTCAAAAT+TGG | - | tig0022713:22561-22580 | Msa1401650:intron | 20.0% |
| !! | ACTATTTCAATATCTTAGTT+TGG | - | tig0022713:23034-23053 | Msa1401650:intron | 20.0% |
| !! | AAAACAATGTATGGAAAAAA+AGG | + | tig0022713:23331-23350 | None:intergenic | 20.0% |
| !! | AATTAACTCAAAACAATGTA+TGG | + | tig0022713:23340-23359 | None:intergenic | 20.0% |
| !! | AATTAACTCAAAACAATGTA+TGG | + | tig0022713:23340-23359 | None:intergenic | 20.0% |
| !! | ATATGTAAAAGCAGAAATTT+GGG | + | tig0022713:23471-23490 | None:intergenic | 20.0% |
| !!! | GCATTTAGTTTCATATTAAA+TGG | - | tig0022713:23607-23626 | Msa1401650:intron | 20.0% |
| !! | ATTGAAAATGATAAAAGTCT+CGG | + | tig0022713:23877-23896 | None:intergenic | 20.0% |
| !!! | ATTTACATTTTTTAGGTGAA+TGG | - | tig0022713:23919-23938 | Msa1401650:intron | 20.0% |
| !!! | TTTACATTTTTTAGGTGAAT+GGG | - | tig0022713:23920-23939 | Msa1401650:intron | 20.0% |
| !!! | TTGAATGAACCTTTTTAATT+TGG | - | tig0022713:24809-24828 | Msa1401650:intron | 20.0% |
| ! | ACTTATGTTTATAGCTTATG+TGG | - | tig0022713:21561-21580 | Msa1401650:intron | 25.0% |
| ! | ACTAAAATCTTTCCAATTCT+AGG | - | tig0022713:21675-21694 | Msa1401650:intron | 25.0% |
| ! | TAAATGGGATACTAACTATT+TGG | - | tig0022713:22119-22138 | Msa1401650:intron | 25.0% |
| ! | TTAGATAGTATCAATTAAGG+AGG | + | tig0022713:22474-22493 | None:intergenic | 25.0% |
| ! | ATGGTCATATATTAGTACAT+GGG | + | tig0022713:22665-22684 | None:intergenic | 25.0% |
| ! | AATGGTCATATATTAGTACA+TGG | + | tig0022713:22666-22685 | None:intergenic | 25.0% |
| !!! | CTTAGTGCAATTTTGAAAAA+AGG | + | tig0022713:22713-22732 | None:intergenic | 25.0% |
| ! | CTTACTTAGAATTATAGTGT+TGG | + | tig0022713:22817-22836 | None:intergenic | 25.0% |
| !! | ACTCATTTGTTGAGAATTTA+TGG | - | tig0022713:22916-22935 | Msa1401650:intron | 25.0% |
| ! | CGTCATTCATTGAAAATTAT+AGG | + | tig0022713:23222-23241 | None:intergenic | 25.0% |
| !!! | AAGCTTCTAAATTTGCTAAT+TGG | - | tig0022713:23432-23451 | Msa1401650:intron | 25.0% |
| ! | CATATGTAAAAGCAGAAATT+TGG | + | tig0022713:23472-23491 | None:intergenic | 25.0% |
| !!! | ACAAAGCTAAAGTTTTAAGT+TGG | + | tig0022713:23499-23518 | None:intergenic | 25.0% |
| ! | TCTATGCTGTCTTATATATT+AGG | - | tig0022713:23690-23709 | Msa1401650:intron | 25.0% |
| ! | TCTTAGAATCTTATTCTCTT+AGG | - | tig0022713:23759-23778 | Msa1401650:intron | 25.0% |
| !!! | TTATAAGGCGTCTATAATTT+TGG | + | tig0022713:23846-23865 | None:intergenic | 25.0% |
| ! | ATAAACAGAATAAAAGTGAG+AGG | - | tig0022713:24109-24128 | Msa1401650:intron | 25.0% |
| ! | TAAACAGAATAAAAGTGAGA+GGG | - | tig0022713:24110-24129 | Msa1401650:intron | 25.0% |
| ! | AGAAAATGAAATAACCTTCA+TGG | + | tig0022713:24265-24284 | None:intergenic | 25.0% |
| ! | TATAGAAGAGAACTTTCATT+TGG | - | tig0022713:24425-24444 | Msa1401650:intron | 25.0% |
| !! | TTTGAAATTCTGTCTTTATC+TGG | - | tig0022713:24572-24591 | Msa1401650:intron | 25.0% |
| ! | TAAGAGTTATCTTTCTCAAA+TGG | + | tig0022713:24916-24935 | None:intergenic | 25.0% |
| ! | TTAACACAACAAACAAACAA+AGG | + | tig0022713:25469-25488 | None:intergenic | 25.0% |
| !!! | TTTGTTTGTTTGTTGTGTTA+AGG | - | tig0022713:25468-25487 | Msa1401650:CDS | 25.0% |
| ! | AGTGTGAAATGTTACTGTTT+TGG | - | tig0022713:21469-21488 | Msa1401650:intron | 30.0% |
| !!! | CAAACATTAAGTCACTTTTG+AGG | + | tig0022713:21653-21672 | None:intergenic | 30.0% |
| CTCAAAAGTGACTTAATGTT+TGG | - | tig0022713:21651-21670 | Msa1401650:intron | 30.0% | |
| TCGAACATAATACCTAGAAT+TGG | + | tig0022713:21690-21709 | None:intergenic | 30.0% | |
| ATACGGTATGTTTGAATTGA+CGG | + | tig0022713:21813-21832 | None:intergenic | 30.0% | |
| ATTCAAACATACCGTATGTT+AGG | - | tig0022713:21816-21835 | Msa1401650:intron | 30.0% | |
| !! | CATATTTCTAGCCTAACATA+CGG | + | tig0022713:21830-21849 | None:intergenic | 30.0% |
| ! | AGTTAGTTGATACTGTTAAG+TGG | - | tig0022713:21999-22018 | Msa1401650:intron | 30.0% |
| ATCATTATGCTTACACTTTG+CGG | + | tig0022713:22145-22164 | None:intergenic | 30.0% | |
| TAGGCAATTGCAAATTTCTT+GGG | + | tig0022713:22202-22221 | None:intergenic | 30.0% | |
| TTAGGCAATTGCAAATTTCT+TGG | + | tig0022713:22203-22222 | None:intergenic | 30.0% | |
| AAAACAACTCAATGAAGCTT+AGG | + | tig0022713:22221-22240 | None:intergenic | 30.0% | |
| !!! | GTTGTTTTTTGTGTATGAGA+TGG | - | tig0022713:22233-22252 | Msa1401650:CDS | 30.0% |
| GTATCAATTAAAGAAGAGAG+AGG | + | tig0022713:22503-22522 | None:intergenic | 30.0% | |
| GATGTATCTATACAATTCCA+CGG | - | tig0022713:22534-22553 | Msa1401650:intron | 30.0% | |
| ! | AAATTGACAATTGATAACCG+TGG | + | tig0022713:22554-22573 | None:intergenic | 30.0% |
| ! | TGAATGAGCAAATTGGTAAT+GGG | + | tig0022713:22601-22620 | None:intergenic | 30.0% |
| TTGAATGAGCAAATTGGTAA+TGG | + | tig0022713:22602-22621 | None:intergenic | 30.0% | |
| GTGAAATTGAATGAGCAAAT+TGG | + | tig0022713:22608-22627 | None:intergenic | 30.0% | |
| AAAAAAGGAGTTGAGAAAAG+TGG | + | tig0022713:22698-22717 | None:intergenic | 30.0% | |
| TAGTAAGAACTTACTGACAT+AGG | + | tig0022713:22886-22905 | None:intergenic | 30.0% | |
| ! | TCAGTACACAGTTTTTAACA+TGG | + | tig0022713:23072-23091 | None:intergenic | 30.0% |
| ! | AAAAACTGTGTACTGAGTTT+TGG | - | tig0022713:23076-23095 | Msa1401650:intron | 30.0% |
| TATCTTATATCAGGTAGTCA+AGG | + | tig0022713:23637-23656 | None:intergenic | 30.0% | |
| GAGGGTAAATATCTTATATC+AGG | + | tig0022713:23646-23665 | None:intergenic | 30.0% | |
| ! | TGATATAAAGCATCTTGAGA+TGG | - | tig0022713:23720-23739 | Msa1401650:intron | 30.0% |
| TATGCTGTAATCCTGTTATT+TGG | - | tig0022713:24027-24046 | Msa1401650:intron | 30.0% | |
| ! | ATGCTGTAATCCTGTTATTT+GGG | - | tig0022713:24028-24047 | Msa1401650:intron | 30.0% |
| ! | TTTTCAATTCCCCAAATAAC+AGG | + | tig0022713:24041-24060 | None:intergenic | 30.0% |
| !!! | ACTTCTTTTTCAGTGATAAC+TGG | - | tig0022713:24180-24199 | Msa1401650:intron | 30.0% |
| TTTGTGTGTATGGTTATGTT+AGG | - | tig0022713:24233-24252 | Msa1401650:intron | 30.0% | |
| !! | GTTATTTCATTTTCTCAGCA+AGG | - | tig0022713:24270-24289 | Msa1401650:intron | 30.0% |
| GAAAGTTCTCTTCTATAAGA+TGG | + | tig0022713:24422-24441 | None:intergenic | 30.0% | |
| GTAGATCATTAAATGCATTG+TGG | + | tig0022713:24453-24472 | None:intergenic | 30.0% | |
| AGGTATTTATTCTATCCGTA+AGG | - | tig0022713:24729-24748 | Msa1401650:intron | 30.0% | |
| GGTATTTATTCTATCCGTAA+GGG | - | tig0022713:24730-24749 | Msa1401650:intron | 30.0% | |
| ATTTGCAAAATTCTCCCTTA+CGG | + | tig0022713:24747-24766 | None:intergenic | 30.0% | |
| TGAATCACGCCAAATTAAAA+AGG | + | tig0022713:24821-24840 | None:intergenic | 30.0% | |
| ! | GAATGTTTGTTTGCTAGAAA+TGG | + | tig0022713:25014-25033 | None:intergenic | 30.0% |
| TCTAGCAAACAAACATTCAA+TGG | - | tig0022713:25016-25035 | Msa1401650:intron | 30.0% | |
| TTATAGCAACATGAATAAGC+TGG | - | tig0022713:25047-25066 | Msa1401650:intron | 30.0% | |
| ! | GGTAGATACATGTTTGAAAT+TGG | + | tig0022713:25119-25138 | None:intergenic | 30.0% |
| ATTTCAAACATGTATCTACC+AGG | - | tig0022713:25119-25138 | Msa1401650:intron | 30.0% | |
| GAAGTTACTGATGATAGAAT+AGG | + | tig0022713:25267-25286 | None:intergenic | 30.0% | |
| ! | TGCTTTTACAATGCTGTAAT+GGG | - | tig0022713:25420-25439 | Msa1401650:intron | 30.0% |
| GTAAAACATGGAAAACTTGT+TGG | + | tig0022713:25515-25534 | None:intergenic | 30.0% | |
| GAGCAAAACGAAATTTGAGT+TGG | - | tig0022713:21370-21389 | Msa1401650:CDS | 35.0% | |
| GCAACTGATGTTTAACACTT+TGG | - | tig0022713:21849-21868 | Msa1401650:CDS | 35.0% | |
| TATCAGCAAGTAAGCTGTAA+TGG | + | tig0022713:22034-22053 | None:intergenic | 35.0% | |
| ! | TTACAGCTTACTTGCTGATA+TGG | - | tig0022713:22034-22053 | Msa1401650:intron | 35.0% |
| TGTAAGCATAATGATGAAGC+TGG | - | tig0022713:22150-22169 | Msa1401650:intron | 35.0% | |
| TAGTAGTAATCTCAGAAGCA+CGG | - | tig0022713:22313-22332 | Msa1401650:intron | 35.0% | |
| AGTTATATCAGCATCATGGT+CGG | + | tig0022713:22381-22400 | None:intergenic | 35.0% | |
| ACCATGATGCTGATATAACT+CGG | - | tig0022713:22381-22400 | Msa1401650:intron | 35.0% | |
| GTCAATTCATCTCATGTGTT+CGG | - | tig0022713:22420-22439 | Msa1401650:intron | 35.0% | |
| GATAGTATCAATTAAGGAGG+AGG | + | tig0022713:22471-22490 | None:intergenic | 35.0% | |
| !! | CAAATTGGTAATGGGATCAT+TGG | + | tig0022713:22593-22612 | None:intergenic | 35.0% |
| ACTGCACTACAATTATCAAG+AGG | - | tig0022713:22735-22754 | Msa1401650:intron | 35.0% | |
| !!! | TTCTGACATTGTGTTGCTTT+TGG | + | tig0022713:22781-22800 | None:intergenic | 35.0% |
| !! | AGATGATAATGCTCCTCTTT+TGG | - | tig0022713:22860-22879 | Msa1401650:intron | 35.0% |
| GATACAATACACATCCGATA+CGG | + | tig0022713:23250-23269 | None:intergenic | 35.0% | |
| GTTTCTTGTCTGTGATTCAT+AGG | - | tig0022713:23278-23297 | Msa1401650:intron | 35.0% | |
| AATTTGAACCAACAGAGCAA+GGG | + | tig0022713:23947-23966 | None:intergenic | 35.0% | |
| AAATTTGAACCAACAGAGCA+AGG | + | tig0022713:23948-23967 | None:intergenic | 35.0% | |
| ! | AGCATTAACAGTGATGATGT+GGG | + | tig0022713:23976-23995 | None:intergenic | 35.0% |
| ! | TGCTGTAATCCTGTTATTTG+GGG | - | tig0022713:24029-24048 | Msa1401650:intron | 35.0% |
| ! | TGTCAGCAATTTTGTGTGTA+TGG | - | tig0022713:24223-24242 | Msa1401650:intron | 35.0% |
| ATGTTAGGATGTTACCATGA+AGG | - | tig0022713:24248-24267 | Msa1401650:intron | 35.0% | |
| GTATGCATTCTTTCAGCAAA+TGG | - | tig0022713:24303-24322 | Msa1401650:intron | 35.0% | |
| !! | TGCCTTTTTGAGCATATAGT+GGG | - | tig0022713:24497-24516 | Msa1401650:intron | 35.0% |
| ATCCCACTATATGCTCAAAA+AGG | + | tig0022713:24502-24521 | None:intergenic | 35.0% | |
| !! | TTTTGAGCATATAGTGGGAT+TGG | - | tig0022713:24502-24521 | Msa1401650:intron | 35.0% |
| GATAGAATAAATACCTGCAC+TGG | + | tig0022713:24725-24744 | None:intergenic | 35.0% | |
| ! | TTAATTTGGCGTGATTCAAG+TGG | - | tig0022713:24823-24842 | Msa1401650:intron | 35.0% |
| GAAATGGAGTTGTCATTGTA+AGG | + | tig0022713:24998-25017 | None:intergenic | 35.0% | |
| ACATCATGCTTCTGATTTCT+TGG | + | tig0022713:25189-25208 | None:intergenic | 35.0% | |
| ! | AAGAAATCAGAAGCATGATG+TGG | - | tig0022713:25188-25207 | Msa1401650:CDS | 35.0% |
| ACTGATGATAGAATAGGTAC+TGG | + | tig0022713:25261-25280 | None:intergenic | 35.0% | |
| AGACACATTAATATCAGCAG+CGG | + | tig0022713:25343-25362 | None:intergenic | 35.0% | |
| GATATTAATGTGTCTCTTCC+TGG | - | tig0022713:25348-25367 | Msa1401650:CDS | 35.0% | |
| !! | CTGCTTTTACAATGCTGTAA+TGG | - | tig0022713:25419-25438 | Msa1401650:intron | 35.0% |
| ! | CAAGTTTTCCATGTTTTACC+AGG | - | tig0022713:25516-25535 | Msa1401650:CDS | 35.0% |
| AAGACCGAGAAAATATGCAG+CGG | - | tig0022713:21232-21251 | Msa1401650:CDS | 40.0% | |
| ! | TTTTGGATTGTGTTGTGCTG+TGG | - | tig0022713:21486-21505 | Msa1401650:intron | 40.0% |
| AGTGAGTTCAGATTCAGATG+TGG | - | tig0022713:21585-21604 | Msa1401650:intron | 40.0% | |
| GTGAGTTCAGATTCAGATGT+GGG | - | tig0022713:21586-21605 | Msa1401650:intron | 40.0% | |
| AGAGTAGACCACAACTATTG+AGG | + | tig0022713:21613-21632 | None:intergenic | 40.0% | |
| !! | GGTCTACTCTTGATAATGTG+AGG | - | tig0022713:21623-21642 | Msa1401650:intron | 40.0% |
| CGCTGAGTTTGACTAAATCA+CGG | - | tig0022713:21714-21733 | Msa1401650:intron | 40.0% | |
| ! | GTTGACATCTGTTCCTCTTT+TGG | - | tig0022713:21936-21955 | Msa1401650:CDS | 40.0% |
| !! | GTTCCTCTTTTGGTCTTTTG+TGG | - | tig0022713:21946-21965 | Msa1401650:CDS | 40.0% |
| TGACCACAAAAGACCAAAAG+AGG | + | tig0022713:21952-21971 | None:intergenic | 40.0% | |
| TCCGAGTTATATCAGCATCA+TGG | + | tig0022713:22385-22404 | None:intergenic | 40.0% | |
| GAGATGAATTGACTGTATCG+CGG | + | tig0022713:22413-22432 | None:intergenic | 40.0% | |
| AAGGAGTTGAGAAAAGTGGT+AGG | + | tig0022713:22694-22713 | None:intergenic | 40.0% | |
| TTACTGACATAGGCCAAAAG+AGG | + | tig0022713:22876-22895 | None:intergenic | 40.0% | |
| GTCTCGGCGTTTCAATTATA+AGG | + | tig0022713:23861-23880 | None:intergenic | 40.0% | |
| ! | GCATTAACAGTGATGATGTG+GGG | + | tig0022713:23975-23994 | None:intergenic | 40.0% |
| ! | CAGCATTAACAGTGATGATG+TGG | + | tig0022713:23977-23996 | None:intergenic | 40.0% |
| CACATCATCACTGTTAATGC+TGG | - | tig0022713:23975-23994 | Msa1401650:intron | 40.0% | |
| AGTGATCACACAGATATGAC+AGG | + | tig0022713:24159-24178 | None:intergenic | 40.0% | |
| !! | GTGCCTTTTTGAGCATATAG+TGG | - | tig0022713:24496-24515 | Msa1401650:intron | 40.0% |
| !! | ACTTATCTCGGTGTTTCTAC+AGG | - | tig0022713:24544-24563 | Msa1401650:intron | 40.0% |
| !! | CTTATCTCGGTGTTTCTACA+GGG | - | tig0022713:24545-24564 | Msa1401650:intron | 40.0% |
| TCGTTCATGCCAAATGAAAG+TGG | - | tig0022713:24596-24615 | Msa1401650:intron | 40.0% | |
| TTCATGCCAAATGAAAGTGG+AGG | - | tig0022713:24599-24618 | Msa1401650:intron | 40.0% | |
| GTTTGAGTCTCTTAAGCATG+TGG | - | tig0022713:24852-24871 | Msa1401650:intron | 40.0% | |
| AACATGTATCTACCAGGTAG+TGG | - | tig0022713:25125-25144 | Msa1401650:intron | 40.0% | |
| TAAAACTACCAACCACTACC+TGG | + | tig0022713:25140-25159 | None:intergenic | 40.0% | |
| !!! | GGTAGTGGTTGGTAGTTTTA+TGG | - | tig0022713:25140-25159 | Msa1401650:intron | 40.0% |
| !! | TAGGTACTGGATCAAGAGTA+GGG | + | tig0022713:25248-25267 | None:intergenic | 40.0% |
| !! | ATAGGTACTGGATCAAGAGT+AGG | + | tig0022713:25249-25268 | None:intergenic | 40.0% |
| GACACATTAATATCAGCAGC+GGG | + | tig0022713:25342-25361 | None:intergenic | 40.0% | |
| ATTAATGTGTCTCTTCCTGG+AGG | - | tig0022713:25351-25370 | Msa1401650:CDS | 40.0% | |
| TCCTGGAGGCTAATTTCATA+AGG | - | tig0022713:25365-25384 | Msa1401650:CDS | 40.0% | |
| ! | TCCTTATGAAATTAGCCTCC+AGG | + | tig0022713:25369-25388 | None:intergenic | 40.0% |
| AGGAAAGTGAGCTAACTACT+AGG | + | tig0022713:25449-25468 | None:intergenic | 40.0% | |
| !! | CATGGAAAACTTGTTGGTCA+CGG | + | tig0022713:25509-25528 | None:intergenic | 40.0% |
| GGAGTTTGGTTGTCTGTTCT+TGG | + | tig0022713:21083-21102 | None:intergenic | 45.0% | |
| TAAAAGCTGAACCGCTGATC+CGG | + | tig0022713:21111-21130 | None:intergenic | 45.0% | |
| ! | ATCAGCGGTTCAGCTTTTAG+CGG | - | tig0022713:21112-21131 | Msa1401650:three_prime_UTR | 45.0% |
| CTTCCTCTCTTCTTCTTCTC+TGG | + | tig0022713:21215-21234 | None:intergenic | 45.0% | |
| ! | CCATCCGCTGCATATTTTCT+CGG | + | tig0022713:21239-21258 | None:intergenic | 45.0% |
| ! | GTTTTGCTCACAGAGCTAAC+TGG | + | tig0022713:21359-21378 | None:intergenic | 45.0% |
| ATGTGGGACCTCAATAGTTG+TGG | - | tig0022713:21602-21621 | Msa1401650:intron | 45.0% | |
| GAAGCACGGATACACTAAAG+TGG | - | tig0022713:22327-22346 | Msa1401650:intron | 45.0% | |
| ATACACTAAAGTGGCTTCCG+AGG | - | tig0022713:22336-22355 | Msa1401650:intron | 45.0% | |
| GAAAAGTGGTAGGAGGTCAA+TGG | + | tig0022713:22684-22703 | None:intergenic | 45.0% | |
| GAGTTGAGAAAAGTGGTAGG+AGG | + | tig0022713:22691-22710 | None:intergenic | 45.0% | |
| CTGAGTTGCATGCAATCTAC+CGG | - | tig0022713:22983-23002 | Msa1401650:intron | 45.0% | |
| TGAATGACGAATCGCCGTAT+CGG | - | tig0022713:23233-23252 | Msa1401650:intron | 45.0% | |
| CATCACTGTTAATGCTGGAG+AGG | - | tig0022713:23980-23999 | Msa1401650:intron | 45.0% | |
| GCACGCACAGTTACTTATCT+CGG | - | tig0022713:24532-24551 | Msa1401650:intron | 45.0% | |
| ATGCCAAATGAAAGTGGAGG+AGG | - | tig0022713:24602-24621 | Msa1401650:intron | 45.0% | |
| GTTCCTCCTCCACTTTCATT+TGG | + | tig0022713:24608-24627 | None:intergenic | 45.0% | |
| TTTGGCGTGATTCAAGTGGT+CGG | - | tig0022713:24827-24846 | Msa1401650:intron | 45.0% | |
| GTCTCTTAAGCATGTGGTCA+TGG | - | tig0022713:24858-24877 | Msa1401650:intron | 45.0% | |
| ! | TGTATCTACCAGGTAGTGGT+TGG | - | tig0022713:25129-25148 | Msa1401650:intron | 45.0% |
| !!! | GTGGTTGGTAGTTTTATGGC+AGG | - | tig0022713:25144-25163 | Msa1401650:intron | 45.0% |
| TTCTTGGCTTCTGCTCATGT+TGG | + | tig0022713:25173-25192 | None:intergenic | 45.0% | |
| AACAACAGCAGGAGATGACA+CGG | + | tig0022713:25220-25239 | None:intergenic | 45.0% | |
| ACTGGATCAAGAGTAGGGAT+GGG | + | tig0022713:25243-25262 | None:intergenic | 45.0% | |
| TACTGGATCAAGAGTAGGGA+TGG | + | tig0022713:25244-25263 | None:intergenic | 45.0% | |
| TCATCAGTAACTTCCTTCCG+TGG | - | tig0022713:25273-25292 | Msa1401650:CDS | 45.0% | |
| CTTCCTTCCGTGGAGATAAT+TGG | - | tig0022713:25283-25302 | Msa1401650:CDS | 45.0% | |
| AGACCAATTATCTCCACGGA+AGG | + | tig0022713:25289-25308 | None:intergenic | 45.0% | |
| CAGCAGACCAATTATCTCCA+CGG | + | tig0022713:25293-25312 | None:intergenic | 45.0% | |
| TTATCCTTTGCATCCGATGC+TGG | + | tig0022713:25318-25337 | None:intergenic | 45.0% | |
| !!! | ATTTAATTTAATTTAATCAT+AGG | + | tig0022713:22104-22123 | None:intergenic | 5.0% |
| !! | TATGATTAAATTAAATTAAA+TGG | - | tig0022713:22103-22122 | Msa1401650:intron | 5.0% |
| !! | ATGATTAAATTAAATTAAAT+GGG | - | tig0022713:22104-22123 | Msa1401650:intron | 5.0% |
| GTGCCAGAGAAGAAGAAGAG+AGG | - | tig0022713:21209-21228 | Msa1401650:CDS | 50.0% | |
| CCGAGAAAATATGCAGCGGA+TGG | - | tig0022713:21236-21255 | Msa1401650:CDS | 50.0% | |
| AACGGAGCAGACGACGATAT+CGG | + | tig0022713:21290-21309 | None:intergenic | 50.0% | |
| AAATCAATCACCGGCGGCAA+CGG | + | tig0022713:21308-21327 | None:intergenic | 50.0% | |
| TCCGCCGTGAAATCAATCAC+CGG | + | tig0022713:21317-21336 | None:intergenic | 50.0% | |
| GTGTTGTGCTGTGGTGTGTT+TGG | - | tig0022713:21495-21514 | Msa1401650:intron | 50.0% | |
| GGGCAGTGTATTGTGTCAAG+AGG | - | tig0022713:21909-21928 | Msa1401650:CDS | 50.0% | |
| GCATCATGGTCGGCACATAT+CGG | + | tig0022713:22371-22390 | None:intergenic | 50.0% | |
| TGCATGCAATCTACCGGTGT+TGG | - | tig0022713:22989-23008 | Msa1401650:intron | 50.0% | |
| !! | CAATCTACCGGTGTTGGTGA+AGG | - | tig0022713:22995-23014 | Msa1401650:intron | 50.0% |
| ATCTCCTCCTTCACCAACAC+CGG | + | tig0022713:23005-23024 | None:intergenic | 50.0% | |
| AGTGCAGCAGCAATCTGAGA+GGG | + | tig0022713:23664-23683 | None:intergenic | 50.0% | |
| GAAAGAATGCATACCGCTCG+AGG | + | tig0022713:24297-24316 | None:intergenic | 50.0% | |
| TTCGTCAGCCCGATTCTTCT+GGG | - | tig0022713:24346-24365 | Msa1401650:intron | 50.0% | |
| AATGTGCCCCCAGAAGAATC+GGG | + | tig0022713:24357-24376 | None:intergenic | 50.0% | |
| CAATGTGCCCCCAGAAGAAT+CGG | + | tig0022713:24358-24377 | None:intergenic | 50.0% | |
| ! | TGGGGGCACATTGACATATG+AGG | - | tig0022713:24365-24384 | Msa1401650:intron | 50.0% |
| GTGTCTTTGGCAAGTCCTGA+TGG | - | tig0022713:24653-24672 | Msa1401650:intron | 50.0% | |
| ! | AGTCCTGATGGACGTGTTGT+TGG | - | tig0022713:24665-24684 | Msa1401650:intron | 50.0% |
| !! | TGGAGGAGTAGCTGGTTTGT+TGG | - | tig0022713:24688-24707 | Msa1401650:intron | 50.0% |
| !! | AGGAGTAGCTGGTTTGTTGG+TGG | - | tig0022713:24691-24710 | Msa1401650:intron | 50.0% |
| TGTCTGTTCTTGGAGCCACG+TGG | + | tig0022713:21073-21092 | None:intergenic | 55.0% | |
| GACAACCAAACTCCGACCAC+CGG | - | tig0022713:21089-21108 | Msa1401650:three_prime_UTR | 55.0% | |
| ! | AGCGGTTCAGCTTTTAGCGG+CGG | - | tig0022713:21115-21134 | Msa1401650:three_prime_UTR | 55.0% |
| ! | CTTTTAGCGGCGGTTCAAGC+AGG | - | tig0022713:21125-21144 | Msa1401650:three_prime_UTR | 55.0% |
| TCCGCAACAACCGCCGTATA+CGG | - | tig0022713:21154-21173 | Msa1401650:three_prime_UTR | 55.0% | |
| AGCGGATGGTTCAGTGACAG+CGG | - | tig0022713:21250-21269 | Msa1401650:CDS | 55.0% | |
| !! | GCAGACGACGATATCGGCTT+CGG | + | tig0022713:21284-21303 | None:intergenic | 55.0% |
| ! | GCCGCCGGTGATTGATTTCA+CGG | - | tig0022713:21310-21329 | Msa1401650:CDS | 55.0% |
| GCCGTGAAATCAATCACCGG+CGG | + | tig0022713:21314-21333 | None:intergenic | 55.0% | |
| ! | GCCGGTGATTGATTTCACGG+CGG | - | tig0022713:21313-21332 | Msa1401650:CDS | 55.0% |
| AAGTGGCTTCCGAGGCGTAT+CGG | - | tig0022713:22344-22363 | Msa1401650:intron | 55.0% | |
| !! | TCTACCGGTGTTGGTGAAGG+AGG | - | tig0022713:22998-23017 | Msa1401650:intron | 55.0% |
| CAGTGCAGCAGCAATCTGAG+AGG | + | tig0022713:23665-23684 | None:intergenic | 55.0% | |
| GAATGGGTCCCTTGCTCTGT+TGG | - | tig0022713:23936-23955 | Msa1401650:intron | 55.0% | |
| TTCTCAGCAAGGACCTCGAG+CGG | - | tig0022713:24281-24300 | Msa1401650:intron | 55.0% | |
| CTTCGTCAGCCCGATTCTTC+TGG | - | tig0022713:24345-24364 | Msa1401650:intron | 55.0% | |
| TCGTCAGCCCGATTCTTCTG+GGG | - | tig0022713:24347-24366 | Msa1401650:intron | 55.0% | |
| GGAGGAACACGAAGCAGATC+AGG | - | tig0022713:24620-24639 | Msa1401650:intron | 55.0% | |
| GGAACACGAAGCAGATCAGG+CGG | - | tig0022713:24623-24642 | Msa1401650:intron | 55.0% | |
| AGGCGGCATGAGTGTGTCTT+TGG | - | tig0022713:24640-24659 | Msa1401650:intron | 55.0% | |
| CCACCAACAACACGTCCATC+AGG | + | tig0022713:24671-24690 | None:intergenic | 55.0% | |
| ! | CCTGATGGACGTGTTGTTGG+TGG | - | tig0022713:24668-24687 | Msa1401650:intron | 55.0% |
| ! | GATGGACGTGTTGTTGGTGG+AGG | - | tig0022713:24671-24690 | Msa1401650:intron | 55.0% |
| ! | GTTGTTGGTGGAGGAGTAGC+TGG | - | tig0022713:24680-24699 | Msa1401650:intron | 55.0% |
| GTAGGGATGGGAACAACAGC+AGG | + | tig0022713:25231-25250 | None:intergenic | 55.0% | |
| TTGGTCTGCTGTGCCAGCAT+CGG | - | tig0022713:25302-25321 | Msa1401650:CDS | 55.0% | |
| ! | TGTGCCAGCATCGGATGCAA+AGG | - | tig0022713:25311-25330 | Msa1401650:CDS | 55.0% |
| GGTCGGATCAGATGCTCCGT+CGG | - | tig0022713:21043-21062 | Msa1401650:three_prime_UTR | 60.0% | |
| CTGATCCGGTGGTCGGAGTT+TGG | + | tig0022713:21097-21116 | None:intergenic | 60.0% | |
| AACTCCGACCACCGGATCAG+CGG | - | tig0022713:21097-21116 | Msa1401650:three_prime_UTR | 60.0% | |
| TGAACCGCTGATCCGGTGGT+CGG | + | tig0022713:21104-21123 | None:intergenic | 60.0% | |
| AAGCTGAACCGCTGATCCGG+TGG | + | tig0022713:21108-21127 | None:intergenic | 60.0% | |
| GTATACGGCGGTTGTTGCGG+AGG | + | tig0022713:21155-21174 | None:intergenic | 60.0% | |
| GCCGTATACGGCGGTTGTTG+CGG | + | tig0022713:21158-21177 | None:intergenic | 60.0% | |
| GCAACAACCGCCGTATACGG+CGG | - | tig0022713:21157-21176 | Msa1401650:three_prime_UTR | 60.0% | |
| GTTACCACCGCCGTATACGG+CGG | + | tig0022713:21167-21186 | None:intergenic | 60.0% | |
| GCCGTATACGGCGGTGGTAA+CGG | - | tig0022713:21166-21185 | Msa1401650:three_prime_UTR | 60.0% | |
| GCCGTTACCACCGCCGTATA+CGG | + | tig0022713:21170-21189 | None:intergenic | 60.0% | |
| TCTGGCACCGTCGTAACTGC+CGG | + | tig0022713:21197-21216 | None:intergenic | 60.0% | |
| AGTGGCTTCCGAGGCGTATC+GGG | - | tig0022713:22345-22364 | Msa1401650:intron | 60.0% | |
| CATATCGGCCCGATACGCCT+CGG | + | tig0022713:22356-22375 | None:intergenic | 60.0% | |
| CGTCAGCCCGATTCTTCTGG+GGG | - | tig0022713:24348-24367 | Msa1401650:intron | 60.0% | |
| GGCGTGATTCAAGTGGTCGG+TGG | - | tig0022713:24830-24849 | Msa1401650:intron | 60.0% | |
| ! | TGCTCCGTCGGAGTACCACG+TGG | - | tig0022713:21055-21074 | Msa1401650:three_prime_UTR | 65.0% |
| GGAGCCACGTGGTACTCCGA+CGG | + | tig0022713:21062-21081 | None:intergenic | 65.0% | |
| ACAACCGCCGTATACGGCGG+TGG | - | tig0022713:21160-21179 | Msa1401650:three_prime_UTR | 65.0% | |
| GGCGTCTCCGGCAGTTACGA+CGG | - | tig0022713:21187-21206 | Msa1401650:exon | 65.0% | |
| GGTGGCTGCAAGTCCAGTGC+AGG | - | tig0022713:24709-24728 | Msa1401650:intron | 65.0% | |
| !! | GGCGGTGGTAACGGCGTCTC+CGG | - | tig0022713:21175-21194 | Msa1401650:three_prime_UTR | 70.0% |
| GTCGTCTGCTCCGTTGCCGC+CGG | - | tig0022713:21295-21314 | Msa1401650:CDS | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| tig0022713 | gene | 21028 | 25544 | 21028 | ID=Msa1401650;Name=Msa1401650 |
| tig0022713 | mRNA | 21028 | 25544 | 21028 | ID=Msa1401650-mRNA-1;Parent=Msa1401650;Name=Msa1401650-mRNA-1;_AED=0.10;_eAED=0.10;_QI=0|0.8|0.66|1|0.6|0.66|6|167|321 |
| tig0022713 | exon | 21028 | 21431 | 21028 | ID=Msa1401650-mRNA-1:exon:18507;Parent=Msa1401650-mRNA-1 |
| tig0022713 | exon | 21842 | 22006 | 21842 | ID=Msa1401650-mRNA-1:exon:18506;Parent=Msa1401650-mRNA-1 |
| tig0022713 | exon | 22186 | 22317 | 22186 | ID=Msa1401650-mRNA-1:exon:18505;Parent=Msa1401650-mRNA-1 |
| tig0022713 | exon | 22571 | 22638 | 22571 | ID=Msa1401650-mRNA-1:exon:18504;Parent=Msa1401650-mRNA-1 |
| tig0022713 | exon | 25171 | 25425 | 25171 | ID=Msa1401650-mRNA-1:exon:18503;Parent=Msa1401650-mRNA-1 |
| tig0022713 | exon | 25436 | 25544 | 25436 | ID=Msa1401650-mRNA-1:exon:18502;Parent=Msa1401650-mRNA-1 |
| tig0022713 | CDS | 25436 | 25544 | 25436 | ID=Msa1401650-mRNA-1:cds;Parent=Msa1401650-mRNA-1 |
| tig0022713 | CDS | 25171 | 25425 | 25171 | ID=Msa1401650-mRNA-1:cds;Parent=Msa1401650-mRNA-1 |
| tig0022713 | CDS | 22571 | 22638 | 22571 | ID=Msa1401650-mRNA-1:cds;Parent=Msa1401650-mRNA-1 |
| tig0022713 | CDS | 22186 | 22317 | 22186 | ID=Msa1401650-mRNA-1:cds;Parent=Msa1401650-mRNA-1 |
| tig0022713 | CDS | 21842 | 22006 | 21842 | ID=Msa1401650-mRNA-1:cds;Parent=Msa1401650-mRNA-1 |
| tig0022713 | CDS | 21195 | 21431 | 21195 | ID=Msa1401650-mRNA-1:cds;Parent=Msa1401650-mRNA-1 |
| tig0022713 | three_prime_UTR | 21028 | 21194 | 21028 | ID=Msa1401650-mRNA-1:three_prime_utr;Parent=Msa1401650-mRNA-1 |
| Gene Sequence |
| Protein sequence |
