Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1258020 | XP_003608790.1 | 96.552 | 290 | 10 | 0 | 32 | 321 | 43 | 332 | 0.0 | 559 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1258020 | sp|Q8VYJ2|AHL1_ARATH | 68.382 | 272 | 67 | 12 | 61 | 318 | 89 | 355 | 1.18e-112 | 333 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0021710 | Msa1258020 | -0.809086 | 2.250743e-50 | -8.615850e-47 |
| Msa0024650 | Msa1258020 | 0.808294 | 3.323636e-50 | -8.615850e-47 |
| Msa0031650 | Msa1258020 | 0.828879 | 7.031443e-55 | -8.615850e-47 |
| Msa0032450 | Msa1258020 | -0.812483 | 4.144111e-51 | -8.615850e-47 |
| Msa0036230 | Msa1258020 | 0.814398 | 1.572569e-51 | -8.615850e-47 |
| Msa0036580 | Msa1258020 | 0.803614 | 3.204820e-49 | -8.615850e-47 |
| Msa0057740 | Msa1258020 | -0.823016 | 1.737757e-53 | -8.615850e-47 |
| Msa0080620 | Msa1258020 | -0.827663 | 1.381175e-54 | -8.615850e-47 |
| Msa0085710 | Msa1258020 | 0.800528 | 1.381861e-48 | -8.615850e-47 |
| Msa0087580 | Msa1258020 | -0.809228 | 2.099295e-50 | -8.615850e-47 |
| Msa0103060 | Msa1258020 | -0.808298 | 3.318005e-50 | -8.615850e-47 |
| Msa0120450 | Msa1258020 | 0.808439 | 3.096105e-50 | -8.615850e-47 |
| Msa0604280 | Msa1258020 | 0.828167 | 1.044856e-54 | -8.615850e-47 |
| Msa0604640 | Msa1258020 | -0.802687 | 4.984133e-49 | -8.615850e-47 |
| Msa0605480 | Msa1258020 | 0.828416 | 9.099863e-55 | -8.615850e-47 |
| Msa0623750 | Msa1258020 | 0.810187 | 1.306013e-50 | -8.615850e-47 |
| Msa0624260 | Msa1258020 | -0.808124 | 3.613357e-50 | -8.615850e-47 |
| Msa0624360 | Msa1258020 | -0.805086 | 1.581794e-49 | -8.615850e-47 |
| Msa0634290 | Msa1258020 | 0.821640 | 3.625566e-53 | -8.615850e-47 |
| Msa0638040 | Msa1258020 | -0.822598 | 2.174910e-53 | -8.615850e-47 |
| Msa0646440 | Msa1258020 | 0.818750 | 1.665630e-52 | -8.615850e-47 |
| Msa0659230 | Msa1258020 | 0.800845 | 1.190671e-48 | -8.615850e-47 |
| Msa0659260 | Msa1258020 | 0.801338 | 9.440363e-49 | -8.615850e-47 |
| Msa0667620 | Msa1258020 | 0.802534 | 5.361005e-49 | -8.615850e-47 |
| Msa0668210 | Msa1258020 | 0.802380 | 5.767833e-49 | -8.615850e-47 |
| Msa0677110 | Msa1258020 | -0.831958 | 1.242195e-55 | -8.615850e-47 |
| Msa0698900 | Msa1258020 | -0.802575 | 5.256685e-49 | -8.615850e-47 |
| Msa0705050 | Msa1258020 | -0.815408 | 9.389186e-52 | -8.615850e-47 |
| Msa0716600 | Msa1258020 | 0.813510 | 2.468344e-51 | -8.615850e-47 |
| Msa0744280 | Msa1258020 | -0.805152 | 1.532379e-49 | -8.615850e-47 |
| Msa0754790 | Msa1258020 | -0.806649 | 7.423062e-50 | -8.615850e-47 |
| Msa0758150 | Msa1258020 | 0.815859 | 7.449462e-52 | -8.615850e-47 |
| Msa0763350 | Msa1258020 | -0.820297 | 7.390782e-53 | -8.615850e-47 |
| Msa0773290 | Msa1258020 | -0.810856 | 9.361857e-51 | -8.615850e-47 |
| Msa0776340 | Msa1258020 | 0.812080 | 5.074762e-51 | -8.615850e-47 |
| Msa0776590 | Msa1258020 | -0.813716 | 2.223086e-51 | -8.615850e-47 |
| Msa0782030 | Msa1258020 | -0.804572 | 2.025866e-49 | -8.615850e-47 |
| Msa0793060 | Msa1258020 | -0.850109 | 2.099466e-60 | -8.615850e-47 |
| Msa0796610 | Msa1258020 | -0.803836 | 2.882604e-49 | -8.615850e-47 |
| Msa0813630 | Msa1258020 | -0.800996 | 1.108993e-48 | -8.615850e-47 |
| Msa0817100 | Msa1258020 | 0.826401 | 2.768603e-54 | -8.615850e-47 |
| Msa0822370 | Msa1258020 | -0.822087 | 2.856817e-53 | -8.615850e-47 |
| Msa0833910 | Msa1258020 | -0.810427 | 1.158984e-50 | -8.615850e-47 |
| Msa0834160 | Msa1258020 | -0.805276 | 1.443297e-49 | -8.615850e-47 |
| Msa0840890 | Msa1258020 | -0.805963 | 1.035614e-49 | -8.615850e-47 |
| Msa0134300 | Msa1258020 | -0.809645 | 1.708382e-50 | -8.615850e-47 |
| Msa0134380 | Msa1258020 | -0.800325 | 1.519522e-48 | -8.615850e-47 |
| Msa0137010 | Msa1258020 | -0.814779 | 1.294672e-51 | -8.615850e-47 |
| Msa0139270 | Msa1258020 | 0.810226 | 1.280497e-50 | -8.615850e-47 |
| Msa0160580 | Msa1258020 | 0.814807 | 1.276503e-51 | -8.615850e-47 |
| Msa0163340 | Msa1258020 | 0.802593 | 5.211418e-49 | -8.615850e-47 |
| Msa0163690 | Msa1258020 | 0.812510 | 4.088892e-51 | -8.615850e-47 |
| Msa0171740 | Msa1258020 | 0.831324 | 1.780422e-55 | -8.615850e-47 |
| Msa0186510 | Msa1258020 | -0.833292 | 5.799261e-56 | -8.615850e-47 |
| Msa0188560 | Msa1258020 | 0.809075 | 2.263951e-50 | -8.615850e-47 |
| Msa0195190 | Msa1258020 | 0.805953 | 1.040852e-49 | -8.615850e-47 |
| Msa0210880 | Msa1258020 | -0.801500 | 8.743654e-49 | -8.615850e-47 |
| Msa0218060 | Msa1258020 | 0.803344 | 3.646207e-49 | -8.615850e-47 |
| Msa0222070 | Msa1258020 | -0.807343 | 5.294746e-50 | -8.615850e-47 |
| Msa0222120 | Msa1258020 | -0.804105 | 2.534216e-49 | -8.615850e-47 |
| Msa0227290 | Msa1258020 | -0.818669 | 1.737220e-52 | -8.615850e-47 |
| Msa0230920 | Msa1258020 | 0.807710 | 4.424312e-50 | -8.615850e-47 |
| Msa0234120 | Msa1258020 | 0.815309 | 9.877721e-52 | -8.615850e-47 |
| Msa1233620 | Msa1258020 | 0.845869 | 3.103245e-59 | -8.615850e-47 |
| Msa1246420 | Msa1258020 | -0.815572 | 8.632959e-52 | -8.615850e-47 |
| Msa1255710 | Msa1258020 | 0.800568 | 1.356226e-48 | -8.615850e-47 |
| Msa1258020 | Msa1258100 | -0.821747 | 3.426240e-53 | -8.615850e-47 |
| Msa1258020 | Msa1266710 | 0.814933 | 1.197002e-51 | -8.615850e-47 |
| Msa1258020 | Msa1275840 | 0.855017 | 8.366580e-62 | -8.615850e-47 |
| Msa1258020 | Msa1283120 | -0.838731 | 2.416308e-57 | -8.615850e-47 |
| Msa1258020 | Msa1286660 | -0.826266 | 2.981533e-54 | -8.615850e-47 |
| Msa1258020 | Msa1299310 | 0.817456 | 3.266282e-52 | -8.615850e-47 |
| Msa1258020 | Msa1309910 | -0.801562 | 8.490188e-49 | -8.615850e-47 |
| Msa1258020 | Msa1314020 | 0.851737 | 7.305252e-61 | -8.615850e-47 |
| Msa1258020 | Msa1319010 | 0.802341 | 5.873243e-49 | -8.615850e-47 |
| Msa1258020 | Msa1329770 | 0.806744 | 7.088734e-50 | -8.615850e-47 |
| Msa1258020 | Msa1335500 | 0.805137 | 1.543581e-49 | -8.615850e-47 |
| Msa1258020 | Msa1339490 | 0.803158 | 3.984332e-49 | -8.615850e-47 |
| Msa1258020 | Msa1342400 | -0.800670 | 1.292767e-48 | -8.615850e-47 |
| Msa1258020 | Msa1348330 | 0.821230 | 4.508879e-53 | -8.615850e-47 |
| Msa1258020 | Msa1357840 | 0.820243 | 7.604339e-53 | -8.615850e-47 |
| Msa1258020 | Msa1363690 | 0.806928 | 6.482637e-50 | -8.615850e-47 |
| Msa1258020 | Msa1377190 | 0.807770 | 4.297542e-50 | -8.615850e-47 |
| Msa1258020 | Msa1378950 | 0.831087 | 2.036673e-55 | -8.615850e-47 |
| Msa1258020 | Msa1388070 | -0.805774 | 1.134896e-49 | -8.615850e-47 |
| Msa1258020 | Msa1401650 | 0.981714 | 2.885069e-153 | -8.615850e-47 |
| Msa1258020 | Msa1406230 | -0.811637 | 6.337455e-51 | -8.615850e-47 |
| Msa1258020 | Msa1407210 | 0.818501 | 1.896820e-52 | -8.615850e-47 |
| Msa1258020 | Msa1409600 | 0.815725 | 7.979863e-52 | -8.615850e-47 |
| Msa1258020 | Msa1417220 | 0.810904 | 9.139424e-51 | -8.615850e-47 |
| Msa1258020 | Msa1445780 | 0.813282 | 2.770133e-51 | -8.615850e-47 |
| Msa1258020 | Msa1449600 | -0.805182 | 1.510216e-49 | -8.615850e-47 |
| Msa1258020 | Msa1451690 | -0.823609 | 1.263040e-53 | -8.615850e-47 |
| Msa1258020 | Msa1452200 | -0.813589 | 2.371118e-51 | -8.615850e-47 |
| Msa1258020 | Msa1456830 | -0.811801 | 5.838688e-51 | -8.615850e-47 |
| Msa1258020 | Msa1459610 | 0.801122 | 1.045139e-48 | -8.615850e-47 |
| Msa0378000 | Msa1258020 | -0.809920 | 1.490429e-50 | -8.615850e-47 |
| Msa0385770 | Msa1258020 | -0.813877 | 2.048539e-51 | -8.615850e-47 |
| Msa0404180 | Msa1258020 | -0.824157 | 9.399905e-54 | -8.615850e-47 |
| Msa0409250 | Msa1258020 | 0.803996 | 2.669454e-49 | -8.615850e-47 |
| Msa0409490 | Msa1258020 | 0.805513 | 1.287529e-49 | -8.615850e-47 |
| Msa0414480 | Msa1258020 | 0.815233 | 1.026606e-51 | -8.615850e-47 |
| Msa0418150 | Msa1258020 | 0.806855 | 6.714881e-50 | -8.615850e-47 |
| Msa0426860 | Msa1258020 | -0.801665 | 8.089974e-49 | -8.615850e-47 |
| Msa0426890 | Msa1258020 | -0.802696 | 4.962703e-49 | -8.615850e-47 |
| Msa0444400 | Msa1258020 | 0.810302 | 1.233354e-50 | -8.615850e-47 |
| Msa0449360 | Msa1258020 | 0.814578 | 1.434547e-51 | -8.615850e-47 |
| Msa0456480 | Msa1258020 | -0.839182 | 1.846868e-57 | -8.615850e-47 |
| Msa0475360 | Msa1258020 | -0.819391 | 1.190327e-52 | -8.615850e-47 |
| Msa0996980 | Msa1258020 | 0.842755 | 2.129958e-58 | -8.615850e-47 |
| Msa0996990 | Msa1258020 | 0.802336 | 5.886830e-49 | -8.615850e-47 |
| Msa1019220 | Msa1258020 | 0.809433 | 1.897007e-50 | -8.615850e-47 |
| Msa1019230 | Msa1258020 | 0.802974 | 4.347974e-49 | -8.615850e-47 |
| Msa1021600 | Msa1258020 | -0.807772 | 4.293941e-50 | -8.615850e-47 |
| Msa1024480 | Msa1258020 | 0.802003 | 6.895929e-49 | -8.615850e-47 |
| Msa1030430 | Msa1258020 | -0.807918 | 3.997542e-50 | -8.615850e-47 |
| Msa1036020 | Msa1258020 | 0.867676 | 1.147808e-65 | -8.615850e-47 |
| Msa1046220 | Msa1258020 | 0.820072 | 8.321242e-53 | -8.615850e-47 |
| Msa1048350 | Msa1258020 | 0.803890 | 2.809026e-49 | -8.615850e-47 |
| Msa1061670 | Msa1258020 | 0.821834 | 3.270549e-53 | -8.615850e-47 |
| Msa1063260 | Msa1258020 | 0.812688 | 3.738807e-51 | -8.615850e-47 |
| Msa1064940 | Msa1258020 | 0.835078 | 2.068982e-56 | -8.615850e-47 |
| Msa1068900 | Msa1258020 | 0.802965 | 4.368296e-49 | -8.615850e-47 |
| Msa1069440 | Msa1258020 | -0.857441 | 1.629094e-62 | -8.615850e-47 |
| Msa1076280 | Msa1258020 | 0.854995 | 8.490262e-62 | -8.615850e-47 |
| Msa1076520 | Msa1258020 | -0.800256 | 1.569794e-48 | -8.615850e-47 |
| Msa1079610 | Msa1258020 | -0.808411 | 3.139033e-50 | -8.615850e-47 |
| Msa1099640 | Msa1258020 | 0.803602 | 3.223227e-49 | -8.615850e-47 |
| Msa1100330 | Msa1258020 | 0.802446 | 5.589768e-49 | -8.615850e-47 |
| Msa1103450 | Msa1258020 | 0.822686 | 2.074677e-53 | -8.615850e-47 |
| Msa1106960 | Msa1258020 | 0.810538 | 1.096649e-50 | -8.615850e-47 |
| Msa0243970 | Msa1258020 | 0.800797 | 1.217677e-48 | -8.615850e-47 |
| Msa0245660 | Msa1258020 | 0.847879 | 8.743524e-60 | -8.615850e-47 |
| Msa0258010 | Msa1258020 | 0.813442 | 2.554801e-51 | -8.615850e-47 |
| Msa0263620 | Msa1258020 | -0.803684 | 3.099845e-49 | -8.615850e-47 |
| Msa0267710 | Msa1258020 | 0.808304 | 3.307155e-50 | -8.615850e-47 |
| Msa0270460 | Msa1258020 | -0.811808 | 5.816616e-51 | -8.615850e-47 |
| Msa0274260 | Msa1258020 | 0.810524 | 1.104554e-50 | -8.615850e-47 |
| Msa0278940 | Msa1258020 | 0.818067 | 2.377796e-52 | -8.615850e-47 |
| Msa0278960 | Msa1258020 | 0.812936 | 3.298095e-51 | -8.615850e-47 |
| Msa0301460 | Msa1258020 | -0.825011 | 5.915818e-54 | -8.615850e-47 |
| Msa0322460 | Msa1258020 | 0.829239 | 5.754011e-55 | -8.615850e-47 |
| Msa0335340 | Msa1258020 | 0.824053 | 9.939073e-54 | -8.615850e-47 |
| Msa0336640 | Msa1258020 | 0.803775 | 2.967538e-49 | -8.615850e-47 |
| Msa0338900 | Msa1258020 | -0.817267 | 3.603714e-52 | -8.615850e-47 |
| Msa0356200 | Msa1258020 | 0.866271 | 3.221385e-65 | -8.615850e-47 |
| Msa0356240 | Msa1258020 | 0.837680 | 4.506177e-57 | -8.615850e-47 |
| Msa0356250 | Msa1258020 | 0.842393 | 2.658521e-58 | -8.615850e-47 |
| Msa0356270 | Msa1258020 | 0.804827 | 1.791956e-49 | -8.615850e-47 |
| Msa0356320 | Msa1258020 | 0.812592 | 3.922420e-51 | -8.615850e-47 |
| Msa0356380 | Msa1258020 | 0.860859 | 1.539984e-63 | -8.615850e-47 |
| Msa0356410 | Msa1258020 | 0.863393 | 2.569866e-64 | -8.615850e-47 |
| Msa0364010 | Msa1258020 | -0.811365 | 7.260119e-51 | -8.615850e-47 |
| Msa1107320 | Msa1258020 | 0.812483 | 4.145383e-51 | -8.615850e-47 |
| Msa1115900 | Msa1258020 | 0.800472 | 1.418589e-48 | -8.615850e-47 |
| Msa1121580 | Msa1258020 | -0.809804 | 1.578599e-50 | -8.615850e-47 |
| Msa1122550 | Msa1258020 | 0.857981 | 1.126628e-62 | -8.615850e-47 |
| Msa1124440 | Msa1258020 | -0.815380 | 9.524870e-52 | -8.615850e-47 |
| Msa1127900 | Msa1258020 | -0.800899 | 1.160762e-48 | -8.615850e-47 |
| Msa1130660 | Msa1258020 | -0.816505 | 5.343126e-52 | -8.615850e-47 |
| Msa1130730 | Msa1258020 | -0.806725 | 7.154982e-50 | -8.615850e-47 |
| Msa1131300 | Msa1258020 | -0.809239 | 2.087717e-50 | -8.615850e-47 |
| Msa1133440 | Msa1258020 | -0.815746 | 7.892021e-52 | -8.615850e-47 |
| Msa1138600 | Msa1258020 | -0.852649 | 4.018240e-61 | -8.615850e-47 |
| Msa1156670 | Msa1258020 | 0.804414 | 2.185296e-49 | -8.615850e-47 |
| Msa1160540 | Msa1258020 | 0.813033 | 3.141658e-51 | -8.615850e-47 |
| Msa1161160 | Msa1258020 | -0.802852 | 4.609629e-49 | -8.615850e-47 |
| Msa1163340 | Msa1258020 | 0.849416 | 3.280520e-60 | -8.615850e-47 |
| Msa1168130 | Msa1258020 | -0.810418 | 1.164265e-50 | -8.615850e-47 |
| Msa1173410 | Msa1258020 | -0.805479 | 1.308467e-49 | -8.615850e-47 |
| Msa1179190 | Msa1258020 | 0.820350 | 7.185234e-53 | -8.615850e-47 |
| Msa1187810 | Msa1258020 | -0.832974 | 6.957216e-56 | -8.615850e-47 |
| Msa1190090 | Msa1258020 | 0.932067 | 1.482871e-94 | -8.615850e-47 |
| Msa1190140 | Msa1258020 | 0.829126 | 6.129127e-55 | -8.615850e-47 |
| Msa1190300 | Msa1258020 | -0.808272 | 3.360741e-50 | -8.615850e-47 |
| Msa1190320 | Msa1258020 | -0.803789 | 2.947946e-49 | -8.615850e-47 |
| Msa1203860 | Msa1258020 | -0.801290 | 9.652770e-49 | -8.615850e-47 |
| Msa1209650 | Msa1258020 | -0.801710 | 7.919477e-49 | -8.615850e-47 |
| Msa1211160 | Msa1258020 | 0.811426 | 7.041958e-51 | -8.615850e-47 |
| Msa1211320 | Msa1258020 | 0.813086 | 3.057714e-51 | -8.615850e-47 |
| Msa1219780 | Msa1258020 | 0.826553 | 2.547353e-54 | -8.615850e-47 |
| Msa1221170 | Msa1258020 | 0.800187 | 1.621213e-48 | -8.615850e-47 |
| Msa0497060 | Msa1258020 | -0.803934 | 2.750631e-49 | -8.615850e-47 |
| Msa0511600 | Msa1258020 | -0.808277 | 3.351479e-50 | -8.615850e-47 |
| Msa0532660 | Msa1258020 | 0.800038 | 1.738496e-48 | -8.615850e-47 |
| Msa0535570 | Msa1258020 | 0.801491 | 8.782869e-49 | -8.615850e-47 |
| Msa0538440 | Msa1258020 | 0.823972 | 1.038809e-53 | -8.615850e-47 |
| Msa0538450 | Msa1258020 | 0.802021 | 6.836566e-49 | -8.615850e-47 |
| Msa0538520 | Msa1258020 | 0.800206 | 1.606522e-48 | -8.615850e-47 |
| Msa0538530 | Msa1258020 | 0.811598 | 6.462181e-51 | -8.615850e-47 |
| Msa0547810 | Msa1258020 | -0.805505 | 1.292520e-49 | -8.615850e-47 |
| Msa0549330 | Msa1258020 | -0.809541 | 1.797881e-50 | -8.615850e-47 |
| Msa0549970 | Msa1258020 | 0.837581 | 4.776555e-57 | -8.615850e-47 |
| Msa0550800 | Msa1258020 | -0.805510 | 1.289507e-49 | -8.615850e-47 |
| Msa0553520 | Msa1258020 | -0.801262 | 9.783179e-49 | -8.615850e-47 |
| Msa0554660 | Msa1258020 | 0.827210 | 1.774463e-54 | -8.615850e-47 |
| Msa0568940 | Msa1258020 | 0.800554 | 1.364543e-48 | -8.615850e-47 |
| Msa0580540 | Msa1258020 | -0.800453 | 1.431024e-48 | -8.615850e-47 |
| Msa0589720 | Msa1258020 | 0.803278 | 3.762979e-49 | -8.615850e-47 |
| Msa0589740 | Msa1258020 | 0.815836 | 7.537979e-52 | -8.615850e-47 |
| Msa0591490 | Msa1258020 | 0.823045 | 1.711138e-53 | -8.615850e-47 |
| Msa0595780 | Msa1258020 | -0.800011 | 1.760201e-48 | -8.615850e-47 |
| Msa0854380 | Msa1258020 | 0.805363 | 1.383993e-49 | -8.615850e-47 |
| Msa0861800 | Msa1258020 | -0.807194 | 5.693612e-50 | -8.615850e-47 |
| Msa0890210 | Msa1258020 | 0.814045 | 1.881192e-51 | -8.615850e-47 |
| Msa0896920 | Msa1258020 | 0.879303 | 1.391401e-69 | -8.615850e-47 |
| Msa0896950 | Msa1258020 | 0.814331 | 1.627227e-51 | -8.615850e-47 |
| Msa0913500 | Msa1258020 | 0.825392 | 4.806192e-54 | -8.615850e-47 |
| Msa0932900 | Msa1258020 | 0.806762 | 7.027188e-50 | -8.615850e-47 |
| Msa0932930 | Msa1258020 | 0.812212 | 4.748463e-51 | -8.615850e-47 |
| Msa0933610 | Msa1258020 | 0.804688 | 1.916142e-49 | -8.615850e-47 |
| Msa0951060 | Msa1258020 | 0.816986 | 4.167184e-52 | -8.615850e-47 |
| Msa0962290 | Msa1258020 | 0.825632 | 4.216099e-54 | -8.615850e-47 |
| Msa0962320 | Msa1258020 | 0.830540 | 2.772775e-55 | -8.615850e-47 |
| Msa0967540 | Msa1258020 | -0.810342 | 1.208885e-50 | -8.615850e-47 |
| Msa0970790 | Msa1258020 | 0.809308 | 2.017985e-50 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1258020 | MtrunA17_Chr4g0056761 | 96.552 | 290 | 10 | 0 | 32 | 321 | 43 | 332 | 0.0 | 559 |
| Msa1258020 | MtrunA17_Chr7g0245841 | 58.929 | 280 | 87 | 7 | 61 | 319 | 60 | 332 | 1.30e-81 | 250 |
| Msa1258020 | MtrunA17_Chr8g0351761 | 53.147 | 286 | 106 | 3 | 61 | 319 | 71 | 355 | 8.20e-73 | 229 |
| Msa1258020 | MtrunA17_Chr1g0188211 | 58.547 | 234 | 74 | 8 | 57 | 271 | 42 | 271 | 2.39e-69 | 219 |
| Msa1258020 | MtrunA17_Chr5g0398621 | 50.813 | 246 | 81 | 5 | 32 | 273 | 30 | 239 | 6.90e-65 | 204 |
| Msa1258020 | MtrunA17_Chr1g0179461 | 49.321 | 221 | 99 | 7 | 61 | 273 | 69 | 284 | 3.97e-59 | 194 |
| Msa1258020 | MtrunA17_Chr6g0476061 | 52.232 | 224 | 88 | 7 | 53 | 265 | 43 | 258 | 2.74e-56 | 185 |
| Msa1258020 | MtrunA17_Chr8g0349091 | 50.952 | 210 | 94 | 4 | 54 | 262 | 82 | 283 | 2.19e-54 | 181 |
| Msa1258020 | MtrunA17_Chr5g0397551 | 49.515 | 206 | 91 | 6 | 61 | 266 | 70 | 262 | 2.20e-51 | 172 |
| Msa1258020 | MtrunA17_Chr8g0386741 | 42.857 | 259 | 124 | 5 | 5 | 262 | 58 | 293 | 5.70e-51 | 172 |
| Msa1258020 | MtrunA17_Chr4g0054661 | 46.330 | 218 | 101 | 7 | 38 | 250 | 51 | 257 | 1.39e-45 | 158 |
| Msa1258020 | MtrunA17_Chr7g0247431 | 41.935 | 279 | 135 | 8 | 50 | 316 | 80 | 343 | 1.88e-45 | 157 |
| Msa1258020 | MtrunA17_Chr7g0274821 | 43.939 | 198 | 104 | 2 | 59 | 256 | 72 | 262 | 7.92e-34 | 127 |
| Msa1258020 | MtrunA17_Chr1g0190011 | 38.942 | 208 | 116 | 4 | 43 | 249 | 25 | 222 | 8.31e-34 | 126 |
| Msa1258020 | MtrunA17_Chr4g0027371 | 51.908 | 131 | 59 | 3 | 122 | 249 | 8 | 137 | 3.00e-33 | 122 |
| Msa1258020 | MtrunA17_Chr4g0027331 | 53.600 | 125 | 54 | 3 | 122 | 243 | 8 | 131 | 3.77e-33 | 119 |
| Msa1258020 | MtrunA17_Chr4g0027351 | 55.263 | 114 | 47 | 2 | 132 | 244 | 18 | 128 | 2.28e-31 | 114 |
| Msa1258020 | MtrunA17_Chr6g0476241 | 41.509 | 212 | 101 | 8 | 48 | 258 | 107 | 296 | 2.38e-31 | 119 |
| Msa1258020 | MtrunA17_Chr4g0027301 | 45.968 | 124 | 65 | 2 | 123 | 244 | 16 | 139 | 6.57e-26 | 100 |
| Msa1258020 | MtrunA17_Chr1g0165101 | 35.897 | 234 | 115 | 9 | 39 | 249 | 57 | 278 | 1.93e-25 | 104 |
| Msa1258020 | MtrunA17_Chr5g0417581 | 40.559 | 143 | 64 | 4 | 124 | 249 | 10 | 148 | 2.47e-23 | 95.5 |
| Msa1258020 | MtrunA17_Chr5g0398591 | 43.548 | 124 | 60 | 2 | 185 | 307 | 11 | 125 | 2.67e-22 | 90.5 |
| Msa1258020 | MtrunA17_Chr3g0133051 | 38.710 | 124 | 74 | 2 | 133 | 255 | 101 | 223 | 1.19e-19 | 87.4 |
| Msa1258020 | MtrunA17_Chr3g0112131 | 43.548 | 124 | 65 | 2 | 136 | 259 | 109 | 227 | 3.33e-19 | 86.3 |
| Msa1258020 | MtrunA17_Chr5g0427311 | 38.806 | 134 | 73 | 4 | 134 | 261 | 81 | 211 | 3.62e-18 | 82.0 |
| Msa1258020 | MtrunA17_Chr5g0443311 | 30.804 | 224 | 129 | 3 | 60 | 266 | 10 | 224 | 7.18e-17 | 79.0 |
| Msa1258020 | MtrunA17_Chr3g0086021 | 36.496 | 137 | 75 | 4 | 116 | 249 | 94 | 221 | 2.86e-16 | 77.8 |
| Msa1258020 | MtrunA17_Chr1g0168121 | 41.129 | 124 | 68 | 2 | 136 | 259 | 72 | 190 | 2.92e-16 | 77.4 |
| Msa1258020 | MtrunA17_Chr4g0054651 | 43.860 | 114 | 60 | 1 | 136 | 249 | 106 | 215 | 1.12e-15 | 76.3 |
| Msa1258020 | MtrunA17_Chr7g0250031 | 45.614 | 114 | 58 | 1 | 136 | 249 | 87 | 196 | 2.93e-15 | 74.7 |
| Msa1258020 | MtrunA17_Chr5g0400531 | 39.535 | 129 | 66 | 5 | 64 | 188 | 123 | 243 | 3.52e-15 | 73.9 |
| Msa1258020 | MtrunA17_Chr5g0398531 | 42.105 | 114 | 62 | 1 | 136 | 249 | 130 | 239 | 2.55e-14 | 72.4 |
| Msa1258020 | MtrunA17_Chr8g0351651 | 43.860 | 114 | 60 | 1 | 136 | 249 | 116 | 225 | 3.77e-14 | 72.0 |
| Msa1258020 | MtrunA17_Chr1g0190051 | 40.351 | 114 | 64 | 1 | 136 | 249 | 104 | 213 | 5.73e-13 | 68.6 |
| Msa1258020 | MtrunA17_Chr5g0398601 | 57.143 | 70 | 30 | 0 | 211 | 280 | 5 | 74 | 8.01e-13 | 68.9 |
| Msa1258020 | MtrunA17_Chr5g0435681 | 39.024 | 123 | 70 | 2 | 137 | 259 | 120 | 237 | 4.49e-12 | 65.9 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1258020 | AT4G12080.1 | 68.382 | 272 | 67 | 12 | 61 | 318 | 89 | 355 | 1.20e-113 | 333 |
| Msa1258020 | AT4G22770.2 | 59.328 | 268 | 97 | 7 | 59 | 318 | 70 | 333 | 2.26e-86 | 263 |
| Msa1258020 | AT4G22770.1 | 59.328 | 268 | 97 | 7 | 59 | 318 | 70 | 333 | 2.26e-86 | 263 |
| Msa1258020 | AT4G25320.1 | 59.420 | 207 | 71 | 5 | 61 | 257 | 86 | 289 | 6.63e-72 | 228 |
| Msa1258020 | AT5G62260.1 | 55.752 | 226 | 84 | 6 | 50 | 263 | 65 | 286 | 2.35e-68 | 219 |
| Msa1258020 | AT5G62260.3 | 55.752 | 226 | 84 | 6 | 50 | 263 | 65 | 286 | 2.35e-68 | 219 |
| Msa1258020 | AT5G51590.1 | 55.455 | 220 | 69 | 4 | 61 | 252 | 78 | 296 | 1.89e-64 | 209 |
| Msa1258020 | AT5G62260.2 | 54.930 | 213 | 83 | 5 | 50 | 250 | 65 | 276 | 3.12e-64 | 205 |
| Msa1258020 | AT4G00200.2 | 60.280 | 214 | 58 | 8 | 61 | 263 | 56 | 253 | 5.34e-59 | 192 |
| Msa1258020 | AT4G00200.1 | 60.280 | 214 | 58 | 8 | 61 | 263 | 56 | 253 | 5.34e-59 | 192 |
| Msa1258020 | AT2G33620.1 | 50.435 | 230 | 98 | 7 | 59 | 287 | 95 | 309 | 7.33e-58 | 190 |
| Msa1258020 | AT2G33620.4 | 50.435 | 230 | 98 | 7 | 59 | 287 | 95 | 309 | 7.33e-58 | 190 |
| Msa1258020 | AT2G33620.2 | 50.435 | 230 | 98 | 7 | 59 | 287 | 95 | 309 | 7.33e-58 | 190 |
| Msa1258020 | AT2G33620.3 | 50.435 | 230 | 98 | 7 | 59 | 287 | 95 | 309 | 7.33e-58 | 190 |
| Msa1258020 | AT1G63470.1 | 52.062 | 194 | 87 | 4 | 61 | 252 | 105 | 294 | 3.77e-55 | 184 |
| Msa1258020 | AT2G45850.1 | 49.754 | 203 | 93 | 3 | 48 | 250 | 85 | 278 | 7.90e-53 | 177 |
| Msa1258020 | AT2G45850.2 | 49.754 | 203 | 93 | 3 | 48 | 250 | 85 | 278 | 7.90e-53 | 177 |
| Msa1258020 | AT3G61310.1 | 53.403 | 191 | 77 | 5 | 61 | 250 | 101 | 280 | 1.43e-50 | 171 |
| Msa1258020 | AT1G63480.5 | 47.291 | 203 | 94 | 4 | 61 | 263 | 93 | 282 | 6.07e-50 | 170 |
| Msa1258020 | AT1G63480.7 | 47.291 | 203 | 94 | 4 | 61 | 263 | 93 | 282 | 6.07e-50 | 170 |
| Msa1258020 | AT1G63480.4 | 47.291 | 203 | 94 | 4 | 61 | 263 | 93 | 282 | 6.07e-50 | 170 |
| Msa1258020 | AT1G63480.3 | 47.291 | 203 | 94 | 4 | 61 | 263 | 93 | 282 | 6.07e-50 | 170 |
| Msa1258020 | AT1G63480.6 | 47.291 | 203 | 94 | 4 | 61 | 263 | 93 | 282 | 6.07e-50 | 170 |
| Msa1258020 | AT1G63480.2 | 47.291 | 203 | 94 | 4 | 61 | 263 | 99 | 288 | 6.18e-50 | 170 |
| Msa1258020 | AT1G63480.1 | 47.291 | 203 | 94 | 4 | 61 | 263 | 99 | 288 | 6.18e-50 | 170 |
| Msa1258020 | AT2G45850.3 | 49.239 | 197 | 91 | 3 | 48 | 244 | 85 | 272 | 1.24e-49 | 167 |
| Msa1258020 | AT4G17950.1 | 39.837 | 246 | 103 | 7 | 61 | 274 | 131 | 363 | 8.91e-43 | 153 |
| Msa1258020 | AT5G46640.1 | 43.882 | 237 | 97 | 7 | 34 | 251 | 78 | 297 | 2.80e-40 | 145 |
| Msa1258020 | AT3G04590.1 | 43.229 | 192 | 99 | 3 | 59 | 250 | 103 | 284 | 2.22e-39 | 141 |
| Msa1258020 | AT3G04590.2 | 43.455 | 191 | 98 | 3 | 59 | 249 | 103 | 283 | 2.27e-38 | 140 |
| Msa1258020 | AT2G36560.1 | 42.975 | 121 | 68 | 1 | 130 | 249 | 102 | 222 | 3.25e-25 | 106 |
| Msa1258020 | AT3G60870.1 | 32.632 | 190 | 107 | 5 | 61 | 249 | 27 | 196 | 9.73e-19 | 84.7 |
| Msa1258020 | AT5G49700.1 | 36.765 | 136 | 82 | 3 | 133 | 264 | 83 | 218 | 7.92e-18 | 82.4 |
| Msa1258020 | AT1G14490.1 | 37.956 | 137 | 77 | 3 | 133 | 261 | 30 | 166 | 1.14e-16 | 77.8 |
| Msa1258020 | AT1G14490.2 | 37.956 | 137 | 77 | 3 | 133 | 261 | 49 | 185 | 1.28e-16 | 78.2 |
| Msa1258020 | AT2G42940.1 | 33.659 | 205 | 120 | 4 | 46 | 250 | 5 | 193 | 3.09e-16 | 77.4 |
| Msa1258020 | AT5G28590.1 | 41.322 | 121 | 46 | 3 | 129 | 249 | 26 | 121 | 5.48e-15 | 73.2 |
| Msa1258020 | AT4G14465.1 | 39.231 | 130 | 74 | 2 | 136 | 265 | 97 | 221 | 1.16e-14 | 73.6 |
| Msa1258020 | AT3G55560.1 | 41.228 | 114 | 64 | 1 | 136 | 249 | 118 | 228 | 2.25e-14 | 73.2 |
| Msa1258020 | AT4G17800.1 | 42.982 | 114 | 61 | 1 | 136 | 249 | 112 | 221 | 2.34e-14 | 72.8 |
| Msa1258020 | AT2G35270.1 | 38.462 | 130 | 75 | 2 | 136 | 265 | 108 | 232 | 3.98e-14 | 72.0 |
| Msa1258020 | AT1G76500.1 | 36.585 | 123 | 65 | 2 | 136 | 249 | 102 | 220 | 3.66e-13 | 69.3 |
| Msa1258020 | AT3G04570.1 | 39.344 | 122 | 62 | 2 | 136 | 249 | 110 | 227 | 4.85e-13 | 69.3 |
| Msa1258020 | AT4G22810.1 | 41.026 | 117 | 62 | 2 | 136 | 249 | 135 | 247 | 1.86e-11 | 64.7 |
| Msa1258020 | AT2G45430.1 | 41.525 | 118 | 61 | 3 | 136 | 249 | 119 | 232 | 2.57e-11 | 63.9 |
Find 106 sgRNAs with CRISPR-Local
Find 272 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CTTCGTCAGCCCGATTCTTC+TGG | 0.153062 | 8_2:+59124565 | Msa1258020:CDS |
| ACATCATGCTTCTGATTTCT+TGG | 0.217240 | 8_2:-59125406 | None:intergenic |
| GGAGTTTGGTTGTCTGTTCT+TGG | 0.245727 | 8_2:-59121300 | None:intergenic |
| TTTGAAATTCTGTCTTTATC+TGG | 0.274522 | 8_2:+59124792 | Msa1258020:CDS |
| CTTCCTCTCTTCTTCTTCTC+TGG | 0.315470 | 8_2:-59121432 | None:intergenic |
| TTCGTCAGCCCGATTCTTCT+GGG | 0.316075 | 8_2:+59124566 | Msa1258020:CDS |
| GATATTAATGTGTCTCTTCC+TGG | 0.316878 | 8_2:+59125568 | Msa1258020:CDS |
| CTTCCTTCCGTGGAGATAAT+TGG | 0.333200 | 8_2:+59125503 | Msa1258020:CDS |
| TGGAGGAGTAGCTGGTTTGT+TGG | 0.341681 | 8_2:+59124908 | Msa1258020:CDS |
| CATAAATGCATATATATATA+AGG | 0.342343 | 8_2:-59125611 | None:intergenic |
| TCCGCAACAACCGCCGTATA+CGG | 0.346397 | 8_2:+59121374 | Msa1258020:CDS |
| GTTCCTCCTCCACTTTCATT+TGG | 0.347793 | 8_2:-59124825 | None:intergenic |
| CTGATCCGGTGGTCGGAGTT+TGG | 0.366555 | 8_2:-59121314 | None:intergenic |
| AGGCGGCATGAGTGTGTCTT+TGG | 0.382271 | 8_2:+59124860 | Msa1258020:CDS |
| AGAAAATGAAATAACCTTCA+TGG | 0.401967 | 8_2:-59124482 | None:intergenic |
| GAATGGGTCCCTTGCTCTGT+TGG | 0.411486 | 8_2:+59124156 | Msa1258020:CDS |
| GGCGGTGGTAACGGCGTCTC+CGG | 0.413422 | 8_2:+59121395 | Msa1258020:CDS |
| GCCGCCGGTGATTGATTTCA+CGG | 0.413441 | 8_2:+59121530 | Msa1258020:CDS |
| TCCTGGAGGCTAATTTCATA+AGG | 0.419486 | 8_2:+59125585 | Msa1258020:exon |
| TTATCCTTTGCATCCGATGC+TGG | 0.421865 | 8_2:-59125535 | None:intergenic |
| TTTGTTTGTTTGTTGTGTTA+AGG | 0.439820 | 8_2:+59125688 | Msa1258020:three_prime_UTR |
| AAATTTGAGTTGGAAAATAT+AGG | 0.440668 | 8_2:+59121600 | Msa1258020:CDS |
| GGAGGAACACGAAGCAGATC+AGG | 0.444348 | 8_2:+59124840 | Msa1258020:CDS |
| GTAAAACATGGAAAACTTGT+TGG | 0.455477 | 8_2:-59125732 | None:intergenic |
| GTATGCATTCTTTCAGCAAA+TGG | 0.463040 | 8_2:+59124523 | Msa1258020:CDS |
| AACGGAGCAGACGACGATAT+CGG | 0.463859 | 8_2:-59121507 | None:intergenic |
| TGGTGTTAGTGGTGGCGTTA+CGG | 0.465659 | 8_2:+59121239 | None:intergenic |
| TAAAAGCTGAACCGCTGATC+CGG | 0.473642 | 8_2:-59121328 | None:intergenic |
| AGTCCTGATGGACGTGTTGT+TGG | 0.482154 | 8_2:+59124885 | Msa1258020:CDS |
| GCCGTTACCACCGCCGTATA+CGG | 0.484752 | 8_2:-59121387 | None:intergenic |
| TTCTTGGCTTCTGCTCATGT+TGG | 0.484881 | 8_2:-59125390 | None:intergenic |
| GTTGTTGGTGGAGGAGTAGC+TGG | 0.488351 | 8_2:+59124900 | Msa1258020:CDS |
| CCACCAACAACACGTCCATC+AGG | 0.492937 | 8_2:-59124888 | None:intergenic |
| GAGCAAAACGAAATTTGAGT+TGG | 0.494483 | 8_2:+59121590 | Msa1258020:CDS |
| GTAGGGATGGGAACAACAGC+AGG | 0.496848 | 8_2:-59125448 | None:intergenic |
| CACATCATCACTGTTAATGC+TGG | 0.504861 | 8_2:+59124195 | Msa1258020:CDS |
| GATAGAATAAATACCTGCAC+TGG | 0.507918 | 8_2:-59124942 | None:intergenic |
| GAAGTTACTGATGATAGAAT+AGG | 0.508118 | 8_2:-59125484 | None:intergenic |
| TACTGGATCAAGAGTAGGGA+TGG | 0.511973 | 8_2:-59125461 | None:intergenic |
| GCAGACGACGATATCGGCTT+CGG | 0.515428 | 8_2:-59121501 | None:intergenic |
| TCCTTATGAAATTAGCCTCC+AGG | 0.516288 | 8_2:-59125586 | None:intergenic |
| AAATCAATCACCGGCGGCAA+CGG | 0.516482 | 8_2:-59121525 | None:intergenic |
| ATGTTAGGATGTTACCATGA+AGG | 0.517184 | 8_2:+59124468 | Msa1258020:intron |
| GTCGTCTGCTCCGTTGCCGC+CGG | 0.518072 | 8_2:+59121515 | Msa1258020:CDS |
| ACTGATGATAGAATAGGTAC+TGG | 0.519373 | 8_2:-59125478 | None:intergenic |
| CCTGATGGACGTGTTGTTGG+TGG | 0.524712 | 8_2:+59124888 | Msa1258020:CDS |
| AGGAAAGTGAGCTAACTACT+AGG | 0.524794 | 8_2:-59125666 | None:intergenic |
| AGGAGTAGCTGGTTTGTTGG+TGG | 0.526402 | 8_2:+59124911 | Msa1258020:CDS |
| AGTGGTGGCGTTACGGTGGT+CGG | 0.531800 | 8_2:+59121246 | None:intergenic |
| TCTGGCACCGTCGTAACTGC+CGG | 0.535791 | 8_2:-59121414 | None:intergenic |
| GCCGTATACGGCGGTGGTAA+CGG | 0.539445 | 8_2:+59121386 | Msa1258020:CDS |
| TCGTCAGCCCGATTCTTCTG+GGG | 0.541650 | 8_2:+59124567 | Msa1258020:CDS |
| CAGCATTAACAGTGATGATG+TGG | 0.544475 | 8_2:-59124194 | None:intergenic |
| ATAGGTACTGGATCAAGAGT+AGG | 0.547053 | 8_2:-59125466 | None:intergenic |
| GGTGGCTGCAAGTCCAGTGC+AGG | 0.550883 | 8_2:+59124929 | Msa1258020:CDS |
| ATGCCAAATGAAAGTGGAGG+AGG | 0.551611 | 8_2:+59124822 | Msa1258020:CDS |
| GTGTCTTTGGCAAGTCCTGA+TGG | 0.556787 | 8_2:+59124873 | Msa1258020:CDS |
| TCGTTCATGCCAAATGAAAG+TGG | 0.559940 | 8_2:+59124816 | Msa1258020:CDS |
| GACAACCAAACTCCGACCAC+CGG | 0.563057 | 8_2:+59121309 | Msa1258020:CDS |
| AAATTTGAACCAACAGAGCA+AGG | 0.567744 | 8_2:-59124165 | None:intergenic |
| GCCGTATACGGCGGTTGTTG+CGG | 0.577945 | 8_2:-59121375 | None:intergenic |
| TAGGTACTGGATCAAGAGTA+GGG | 0.580504 | 8_2:-59125465 | None:intergenic |
| AACTCCGACCACCGGATCAG+CGG | 0.581732 | 8_2:+59121317 | Msa1258020:CDS |
| GACACATTAATATCAGCAGC+GGG | 0.589557 | 8_2:-59125559 | None:intergenic |
| GACAGGAACCTGGTAAAACA+TGG | 0.589646 | 8_2:-59125744 | None:intergenic |
| CATCACTGTTAATGCTGGAG+AGG | 0.596487 | 8_2:+59124200 | Msa1258020:CDS |
| AATTTGAACCAACAGAGCAA+GGG | 0.597677 | 8_2:-59124164 | None:intergenic |
| ACAACCGCCGTATACGGCGG+TGG | 0.597858 | 8_2:+59121380 | Msa1258020:CDS |
| TTGGTCTGCTGTGCCAGCAT+CGG | 0.597910 | 8_2:+59125522 | Msa1258020:CDS |
| GGCGTCTCCGGCAGTTACGA+CGG | 0.598191 | 8_2:+59121407 | Msa1258020:CDS |
| GATGGACGTGTTGTTGGTGG+AGG | 0.601930 | 8_2:+59124891 | Msa1258020:CDS |
| ATTCTACAATGACAGGAACC+TGG | 0.603314 | 8_2:-59125754 | None:intergenic |
| GTATACGGCGGTTGTTGCGG+AGG | 0.606155 | 8_2:-59121372 | None:intergenic |
| TGTGCCAGCATCGGATGCAA+AGG | 0.609579 | 8_2:+59125531 | Msa1258020:CDS |
| TCATCAGTAACTTCCTTCCG+TGG | 0.610671 | 8_2:+59125493 | Msa1258020:CDS |
| GAAAGAATGCATACCGCTCG+AGG | 0.613852 | 8_2:-59124514 | None:intergenic |
| TCCGCCGTGAAATCAATCAC+CGG | 0.617619 | 8_2:-59121534 | None:intergenic |
| CATGGAAAACTTGTTGGTCA+CGG | 0.617686 | 8_2:-59125726 | None:intergenic |
| TGAACCGCTGATCCGGTGGT+CGG | 0.619667 | 8_2:-59121321 | None:intergenic |
| CCGAGAAAATATGCAGCGGA+TGG | 0.621272 | 8_2:+59121456 | Msa1258020:CDS |
| TTAACACAACAAACAAACAA+AGG | 0.622132 | 8_2:-59125686 | None:intergenic |
| GGTCGGATCAGATGCTCCGT+CGG | 0.623317 | 8_2:+59121263 | Msa1258020:CDS |
| TGTATCTACCAGGTAGTGGT+TGG | 0.624215 | 8_2:+59125349 | Msa1258020:intron |
| GTGCCAGAGAAGAAGAAGAG+AGG | 0.624418 | 8_2:+59121429 | Msa1258020:CDS |
| AGACCAATTATCTCCACGGA+AGG | 0.635192 | 8_2:-59125506 | None:intergenic |
| TTCTCAGCAAGGACCTCGAG+CGG | 0.641808 | 8_2:+59124501 | Msa1258020:CDS |
| AGCATTAACAGTGATGATGT+GGG | 0.643782 | 8_2:-59124193 | None:intergenic |
| ACTGGATCAAGAGTAGGGAT+GGG | 0.644029 | 8_2:-59125460 | None:intergenic |
| CAGCAGACCAATTATCTCCA+CGG | 0.646524 | 8_2:-59125510 | None:intergenic |
| GGAGCCACGTGGTACTCCGA+CGG | 0.654960 | 8_2:-59121279 | None:intergenic |
| GCAACAACCGCCGTATACGG+CGG | 0.658539 | 8_2:+59121377 | Msa1258020:CDS |
| AGACACATTAATATCAGCAG+CGG | 0.659162 | 8_2:-59125560 | None:intergenic |
| AACAACAGCAGGAGATGACA+CGG | 0.660123 | 8_2:-59125437 | None:intergenic |
| AGCGGATGGTTCAGTGACAG+CGG | 0.663385 | 8_2:+59121470 | Msa1258020:CDS |
| GGAACACGAAGCAGATCAGG+CGG | 0.674892 | 8_2:+59124843 | Msa1258020:CDS |
| AAGAAATCAGAAGCATGATG+TGG | 0.682976 | 8_2:+59125408 | Msa1258020:CDS |
| ATTAATGTGTCTCTTCCTGG+AGG | 0.686956 | 8_2:+59125571 | Msa1258020:CDS |
| GTTACCACCGCCGTATACGG+CGG | 0.693943 | 8_2:-59121384 | None:intergenic |
| TGTTAGTGGTGGCGTTACGG+TGG | 0.696342 | 8_2:+59121242 | None:intergenic |
| GCCGTGAAATCAATCACCGG+CGG | 0.714414 | 8_2:-59121531 | None:intergenic |
| AAGACCGAGAAAATATGCAG+CGG | 0.716009 | 8_2:+59121452 | Msa1258020:CDS |
| TTCATGCCAAATGAAAGTGG+AGG | 0.721594 | 8_2:+59124819 | Msa1258020:CDS |
| TGCTCCGTCGGAGTACCACG+TGG | 0.724270 | 8_2:+59121275 | Msa1258020:CDS |
| GCATTAACAGTGATGATGTG+GGG | 0.743775 | 8_2:-59124192 | None:intergenic |
| TGTCTGTTCTTGGAGCCACG+TGG | 0.751370 | 8_2:-59121290 | None:intergenic |
| GCCGGTGATTGATTTCACGG+CGG | 0.764503 | 8_2:+59121533 | Msa1258020:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TTACAAAAAAAAAAAAACTA+TGG | - | chr8_2:59121965-59121984 | None:intergenic | 10.0% |
| !!! | TCTATTTTATATTTTACTAA+TGG | + | chr8_2:59123338-59123357 | Msa1258020:intron | 10.0% |
| !! | AATTAAAAGTTAAACAAAAA+GGG | - | chr8_2:59123627-59123646 | None:intergenic | 10.0% |
| !! | AAATATTCAAATTCTTAATT+TGG | + | chr8_2:59124040-59124059 | Msa1258020:intron | 10.0% |
| !!! | TTTTTTGTAGAATAAAATTA+GGG | + | chr8_2:59124299-59124318 | Msa1258020:intron | 10.0% |
| !! | TAATTAGATAGTATCAATTA+AGG | - | chr8_2:59122697-59122716 | None:intergenic | 15.0% |
| !! | AGAATATTGAAAATTGAATT+TGG | - | chr8_2:59122856-59122875 | None:intergenic | 15.0% |
| !! | GAATTAAAAGTTAAACAAAA+AGG | - | chr8_2:59123628-59123647 | None:intergenic | 15.0% |
| !!! | TTTGTAATTCTCTAAAAATT+TGG | + | chr8_2:59123734-59123753 | Msa1258020:intron | 15.0% |
| !!! | TGTTAACATTTACATTTTTT+AGG | + | chr8_2:59124132-59124151 | Msa1258020:intron | 15.0% |
| !!! | GTTTTTTGTAGAATAAAATT+AGG | + | chr8_2:59124298-59124317 | Msa1258020:intron | 15.0% |
| !! | CATAAATGCATATATATATA+AGG | - | chr8_2:59125614-59125633 | None:intergenic | 15.0% |
| !!! | AAATTTGAGTTGGAAAATAT+AGG | + | chr8_2:59121600-59121619 | Msa1258020:CDS | 20.0% |
| !! | GAAAGACTTAAATATTATTG+CGG | + | chr8_2:59122108-59122127 | Msa1258020:intron | 20.0% |
| !! | AAAGACTTAAATATTATTGC+GGG | + | chr8_2:59122109-59122128 | Msa1258020:intron | 20.0% |
| !!! | CAATTGTCAATTTTCAAAAT+TGG | + | chr8_2:59122781-59122800 | Msa1258020:intron | 20.0% |
| !! | ACTATTTCAATATCTTAGTT+TGG | + | chr8_2:59123254-59123273 | Msa1258020:intron | 20.0% |
| !! | AAAACAATGTATGGAAAAAA+AGG | - | chr8_2:59123551-59123570 | None:intergenic | 20.0% |
| !! | AATTAACTCAAAACAATGTA+TGG | - | chr8_2:59123560-59123579 | None:intergenic | 20.0% |
| !! | AATTAACTCAAAACAATGTA+TGG | - | chr8_2:59123560-59123579 | None:intergenic | 20.0% |
| !! | ATATGTAAAAGCAGAAATTT+GGG | - | chr8_2:59123691-59123710 | None:intergenic | 20.0% |
| !!! | GCATTTAGTTTCATATTAAA+TGG | + | chr8_2:59123827-59123846 | Msa1258020:intron | 20.0% |
| !! | ATTGAAAATGATAAAAGTCT+CGG | - | chr8_2:59124097-59124116 | None:intergenic | 20.0% |
| !!! | ATTTACATTTTTTAGGTGAA+TGG | + | chr8_2:59124139-59124158 | Msa1258020:intron | 20.0% |
| !!! | TTTACATTTTTTAGGTGAAT+GGG | + | chr8_2:59124140-59124159 | Msa1258020:intron | 20.0% |
| !!! | TTGAATGAACCTTTTTAATT+TGG | + | chr8_2:59125029-59125048 | Msa1258020:intron | 20.0% |
| ! | ACTTATGTTTATAGCTTATG+TGG | + | chr8_2:59121781-59121800 | Msa1258020:intron | 25.0% |
| ! | ACTAAAATCTTTCCAATTCT+AGG | + | chr8_2:59121895-59121914 | Msa1258020:intron | 25.0% |
| ! | TAAATGGGATACTAACTATT+TGG | + | chr8_2:59122339-59122358 | Msa1258020:intron | 25.0% |
| ! | TTAGATAGTATCAATTAAGG+AGG | - | chr8_2:59122694-59122713 | None:intergenic | 25.0% |
| ! | ATGGTCATATATTAGTACAT+GGG | - | chr8_2:59122885-59122904 | None:intergenic | 25.0% |
| ! | AATGGTCATATATTAGTACA+TGG | - | chr8_2:59122886-59122905 | None:intergenic | 25.0% |
| !!! | CTTAGTGCAATTTTGAAAAA+AGG | - | chr8_2:59122933-59122952 | None:intergenic | 25.0% |
| ! | CTTACTTAGAATTATAGTGT+TGG | - | chr8_2:59123037-59123056 | None:intergenic | 25.0% |
| !! | ACTCATTTGTTGAGAATTTA+TGG | + | chr8_2:59123136-59123155 | Msa1258020:intron | 25.0% |
| ! | CGTCATTCATTGAAAATTAT+AGG | - | chr8_2:59123442-59123461 | None:intergenic | 25.0% |
| !!! | AAGCTTCTAAATTTGCTAAT+TGG | + | chr8_2:59123652-59123671 | Msa1258020:intron | 25.0% |
| ! | CATATGTAAAAGCAGAAATT+TGG | - | chr8_2:59123692-59123711 | None:intergenic | 25.0% |
| !!! | ACAAAGCTAAAGTTTTAAGT+TGG | - | chr8_2:59123719-59123738 | None:intergenic | 25.0% |
| ! | TCTATGCTGTCTTATATATT+AGG | + | chr8_2:59123910-59123929 | Msa1258020:intron | 25.0% |
| ! | TCTTAGAATCTTATTCTCTT+AGG | + | chr8_2:59123979-59123998 | Msa1258020:intron | 25.0% |
| !!! | TTATAAGGCGTCTATAATTT+TGG | - | chr8_2:59124066-59124085 | None:intergenic | 25.0% |
| ! | ATAAACAGAATAAAAGTGAG+AGG | + | chr8_2:59124329-59124348 | Msa1258020:intron | 25.0% |
| ! | TAAACAGAATAAAAGTGAGA+GGG | + | chr8_2:59124330-59124349 | Msa1258020:intron | 25.0% |
| ! | AGAAAATGAAATAACCTTCA+TGG | - | chr8_2:59124485-59124504 | None:intergenic | 25.0% |
| ! | TATAGAAGAGAACTTTCATT+TGG | + | chr8_2:59124645-59124664 | Msa1258020:intron | 25.0% |
| !! | TTTGAAATTCTGTCTTTATC+TGG | + | chr8_2:59124792-59124811 | Msa1258020:CDS | 25.0% |
| ! | TAAGAGTTATCTTTCTCAAA+TGG | - | chr8_2:59125136-59125155 | None:intergenic | 25.0% |
| ! | TTAACACAACAAACAAACAA+AGG | - | chr8_2:59125689-59125708 | None:intergenic | 25.0% |
| !!! | TTTGTTTGTTTGTTGTGTTA+AGG | + | chr8_2:59125688-59125707 | Msa1258020:three_prime_UTR | 25.0% |
| ! | AGTGTGAAATGTTACTGTTT+TGG | + | chr8_2:59121689-59121708 | Msa1258020:intron | 30.0% |
| !!! | CAAACATTAAGTCACTTTTG+AGG | - | chr8_2:59121873-59121892 | None:intergenic | 30.0% |
| CTCAAAAGTGACTTAATGTT+TGG | + | chr8_2:59121871-59121890 | Msa1258020:intron | 30.0% | |
| TCGAACATAATACCTAGAAT+TGG | - | chr8_2:59121910-59121929 | None:intergenic | 30.0% | |
| ATACGGTATGTTTGAATTGA+CGG | - | chr8_2:59122033-59122052 | None:intergenic | 30.0% | |
| ATTCAAACATACCGTATGTT+AGG | + | chr8_2:59122036-59122055 | Msa1258020:intron | 30.0% | |
| !! | CATATTTCTAGCCTAACATA+CGG | - | chr8_2:59122050-59122069 | None:intergenic | 30.0% |
| ! | AGTTAGTTGATACTGTTAAG+TGG | + | chr8_2:59122219-59122238 | Msa1258020:intron | 30.0% |
| ATCATTATGCTTACACTTTG+CGG | - | chr8_2:59122365-59122384 | None:intergenic | 30.0% | |
| TAGGCAATTGCAAATTTCTT+GGG | - | chr8_2:59122422-59122441 | None:intergenic | 30.0% | |
| TTAGGCAATTGCAAATTTCT+TGG | - | chr8_2:59122423-59122442 | None:intergenic | 30.0% | |
| AAAACAACTCAATGAAGCTT+AGG | - | chr8_2:59122441-59122460 | None:intergenic | 30.0% | |
| !!! | GTTGTTTTTTGTGTATGAGA+TGG | + | chr8_2:59122453-59122472 | Msa1258020:intron | 30.0% |
| GTATCAATTAAAGAAGAGAG+AGG | - | chr8_2:59122723-59122742 | None:intergenic | 30.0% | |
| GATGTATCTATACAATTCCA+CGG | + | chr8_2:59122754-59122773 | Msa1258020:intron | 30.0% | |
| ! | AAATTGACAATTGATAACCG+TGG | - | chr8_2:59122774-59122793 | None:intergenic | 30.0% |
| ! | TGAATGAGCAAATTGGTAAT+GGG | - | chr8_2:59122821-59122840 | None:intergenic | 30.0% |
| TTGAATGAGCAAATTGGTAA+TGG | - | chr8_2:59122822-59122841 | None:intergenic | 30.0% | |
| GTGAAATTGAATGAGCAAAT+TGG | - | chr8_2:59122828-59122847 | None:intergenic | 30.0% | |
| AAAAAAGGAGTTGAGAAAAG+TGG | - | chr8_2:59122918-59122937 | None:intergenic | 30.0% | |
| TAGTAAGAACTTACTGACAT+AGG | - | chr8_2:59123106-59123125 | None:intergenic | 30.0% | |
| ! | TCAGTACACAGTTTTTAACA+TGG | - | chr8_2:59123292-59123311 | None:intergenic | 30.0% |
| ! | AAAAACTGTGTACTGAGTTT+TGG | + | chr8_2:59123296-59123315 | Msa1258020:intron | 30.0% |
| TATCTTATATCAGGTAGTCA+AGG | - | chr8_2:59123857-59123876 | None:intergenic | 30.0% | |
| GAGGGTAAATATCTTATATC+AGG | - | chr8_2:59123866-59123885 | None:intergenic | 30.0% | |
| ! | TGATATAAAGCATCTTGAGA+TGG | + | chr8_2:59123940-59123959 | Msa1258020:intron | 30.0% |
| TATGCTGTAATCCTGTTATT+TGG | + | chr8_2:59124247-59124266 | Msa1258020:intron | 30.0% | |
| ! | ATGCTGTAATCCTGTTATTT+GGG | + | chr8_2:59124248-59124267 | Msa1258020:intron | 30.0% |
| ! | TTTTCAATTCCCCAAATAAC+AGG | - | chr8_2:59124261-59124280 | None:intergenic | 30.0% |
| !!! | ACTTCTTTTTCAGTGATAAC+TGG | + | chr8_2:59124400-59124419 | Msa1258020:intron | 30.0% |
| TTTGTGTGTATGGTTATGTT+AGG | + | chr8_2:59124453-59124472 | Msa1258020:intron | 30.0% | |
| !! | GTTATTTCATTTTCTCAGCA+AGG | + | chr8_2:59124490-59124509 | Msa1258020:CDS | 30.0% |
| GAAAGTTCTCTTCTATAAGA+TGG | - | chr8_2:59124642-59124661 | None:intergenic | 30.0% | |
| GTAGATCATTAAATGCATTG+TGG | - | chr8_2:59124673-59124692 | None:intergenic | 30.0% | |
| AGGTATTTATTCTATCCGTA+AGG | + | chr8_2:59124949-59124968 | Msa1258020:intron | 30.0% | |
| GGTATTTATTCTATCCGTAA+GGG | + | chr8_2:59124950-59124969 | Msa1258020:intron | 30.0% | |
| ATTTGCAAAATTCTCCCTTA+CGG | - | chr8_2:59124967-59124986 | None:intergenic | 30.0% | |
| TGAATCACGCCAAATTAAAA+AGG | - | chr8_2:59125041-59125060 | None:intergenic | 30.0% | |
| ! | GAATGTTTGTTTGCTAGAAA+TGG | - | chr8_2:59125234-59125253 | None:intergenic | 30.0% |
| TCTAGCAAACAAACATTCAA+TGG | + | chr8_2:59125236-59125255 | Msa1258020:intron | 30.0% | |
| TTATAGCAACATGAATAAGC+TGG | + | chr8_2:59125267-59125286 | Msa1258020:intron | 30.0% | |
| ! | GGTAGATACATGTTTGAAAT+TGG | - | chr8_2:59125339-59125358 | None:intergenic | 30.0% |
| ATTTCAAACATGTATCTACC+AGG | + | chr8_2:59125339-59125358 | Msa1258020:intron | 30.0% | |
| GAAGTTACTGATGATAGAAT+AGG | - | chr8_2:59125487-59125506 | None:intergenic | 30.0% | |
| ! | TGCTTTTACAATGCTGTAAT+GGG | + | chr8_2:59125640-59125659 | Msa1258020:three_prime_UTR | 30.0% |
| GTAAAACATGGAAAACTTGT+TGG | - | chr8_2:59125735-59125754 | None:intergenic | 30.0% | |
| GAGCAAAACGAAATTTGAGT+TGG | + | chr8_2:59121590-59121609 | Msa1258020:CDS | 35.0% | |
| GCAACTGATGTTTAACACTT+TGG | + | chr8_2:59122069-59122088 | Msa1258020:intron | 35.0% | |
| TATCAGCAAGTAAGCTGTAA+TGG | - | chr8_2:59122254-59122273 | None:intergenic | 35.0% | |
| ! | TTACAGCTTACTTGCTGATA+TGG | + | chr8_2:59122254-59122273 | Msa1258020:intron | 35.0% |
| TGTAAGCATAATGATGAAGC+TGG | + | chr8_2:59122370-59122389 | Msa1258020:intron | 35.0% | |
| TAGTAGTAATCTCAGAAGCA+CGG | + | chr8_2:59122533-59122552 | Msa1258020:intron | 35.0% | |
| AGTTATATCAGCATCATGGT+CGG | - | chr8_2:59122601-59122620 | None:intergenic | 35.0% | |
| ACCATGATGCTGATATAACT+CGG | + | chr8_2:59122601-59122620 | Msa1258020:intron | 35.0% | |
| GTCAATTCATCTCATGTGTT+CGG | + | chr8_2:59122640-59122659 | Msa1258020:intron | 35.0% | |
| GATAGTATCAATTAAGGAGG+AGG | - | chr8_2:59122691-59122710 | None:intergenic | 35.0% | |
| !! | CAAATTGGTAATGGGATCAT+TGG | - | chr8_2:59122813-59122832 | None:intergenic | 35.0% |
| ACTGCACTACAATTATCAAG+AGG | + | chr8_2:59122955-59122974 | Msa1258020:intron | 35.0% | |
| !!! | TTCTGACATTGTGTTGCTTT+TGG | - | chr8_2:59123001-59123020 | None:intergenic | 35.0% |
| !! | AGATGATAATGCTCCTCTTT+TGG | + | chr8_2:59123080-59123099 | Msa1258020:intron | 35.0% |
| GATACAATACACATCCGATA+CGG | - | chr8_2:59123470-59123489 | None:intergenic | 35.0% | |
| GTTTCTTGTCTGTGATTCAT+AGG | + | chr8_2:59123498-59123517 | Msa1258020:intron | 35.0% | |
| AATTTGAACCAACAGAGCAA+GGG | - | chr8_2:59124167-59124186 | None:intergenic | 35.0% | |
| AAATTTGAACCAACAGAGCA+AGG | - | chr8_2:59124168-59124187 | None:intergenic | 35.0% | |
| ! | AGCATTAACAGTGATGATGT+GGG | - | chr8_2:59124196-59124215 | None:intergenic | 35.0% |
| ! | TGCTGTAATCCTGTTATTTG+GGG | + | chr8_2:59124249-59124268 | Msa1258020:intron | 35.0% |
| ! | TGTCAGCAATTTTGTGTGTA+TGG | + | chr8_2:59124443-59124462 | Msa1258020:intron | 35.0% |
| ATGTTAGGATGTTACCATGA+AGG | + | chr8_2:59124468-59124487 | Msa1258020:intron | 35.0% | |
| GTATGCATTCTTTCAGCAAA+TGG | + | chr8_2:59124523-59124542 | Msa1258020:CDS | 35.0% | |
| !! | TGCCTTTTTGAGCATATAGT+GGG | + | chr8_2:59124717-59124736 | Msa1258020:intron | 35.0% |
| ATCCCACTATATGCTCAAAA+AGG | - | chr8_2:59124722-59124741 | None:intergenic | 35.0% | |
| !! | TTTTGAGCATATAGTGGGAT+TGG | + | chr8_2:59124722-59124741 | Msa1258020:intron | 35.0% |
| GATAGAATAAATACCTGCAC+TGG | - | chr8_2:59124945-59124964 | None:intergenic | 35.0% | |
| ! | TTAATTTGGCGTGATTCAAG+TGG | + | chr8_2:59125043-59125062 | Msa1258020:intron | 35.0% |
| GAAATGGAGTTGTCATTGTA+AGG | - | chr8_2:59125218-59125237 | None:intergenic | 35.0% | |
| ACATCATGCTTCTGATTTCT+TGG | - | chr8_2:59125409-59125428 | None:intergenic | 35.0% | |
| ! | AAGAAATCAGAAGCATGATG+TGG | + | chr8_2:59125408-59125427 | Msa1258020:CDS | 35.0% |
| ACTGATGATAGAATAGGTAC+TGG | - | chr8_2:59125481-59125500 | None:intergenic | 35.0% | |
| AGACACATTAATATCAGCAG+CGG | - | chr8_2:59125563-59125582 | None:intergenic | 35.0% | |
| GATATTAATGTGTCTCTTCC+TGG | + | chr8_2:59125568-59125587 | Msa1258020:CDS | 35.0% | |
| !! | CTGCTTTTACAATGCTGTAA+TGG | + | chr8_2:59125639-59125658 | Msa1258020:three_prime_UTR | 35.0% |
| ! | CAAGTTTTCCATGTTTTACC+AGG | + | chr8_2:59125736-59125755 | Msa1258020:three_prime_UTR | 35.0% |
| AAGACCGAGAAAATATGCAG+CGG | + | chr8_2:59121452-59121471 | Msa1258020:CDS | 40.0% | |
| ! | TTTTGGATTGTGTTGTGCTG+TGG | + | chr8_2:59121706-59121725 | Msa1258020:intron | 40.0% |
| AGTGAGTTCAGATTCAGATG+TGG | + | chr8_2:59121805-59121824 | Msa1258020:intron | 40.0% | |
| GTGAGTTCAGATTCAGATGT+GGG | + | chr8_2:59121806-59121825 | Msa1258020:intron | 40.0% | |
| AGAGTAGACCACAACTATTG+AGG | - | chr8_2:59121833-59121852 | None:intergenic | 40.0% | |
| !! | GGTCTACTCTTGATAATGTG+AGG | + | chr8_2:59121843-59121862 | Msa1258020:intron | 40.0% |
| CGCTGAGTTTGACTAAATCA+CGG | + | chr8_2:59121934-59121953 | Msa1258020:intron | 40.0% | |
| ! | GTTGACATCTGTTCCTCTTT+TGG | + | chr8_2:59122156-59122175 | Msa1258020:intron | 40.0% |
| !! | GTTCCTCTTTTGGTCTTTTG+TGG | + | chr8_2:59122166-59122185 | Msa1258020:intron | 40.0% |
| TGACCACAAAAGACCAAAAG+AGG | - | chr8_2:59122172-59122191 | None:intergenic | 40.0% | |
| TCCGAGTTATATCAGCATCA+TGG | - | chr8_2:59122605-59122624 | None:intergenic | 40.0% | |
| GAGATGAATTGACTGTATCG+CGG | - | chr8_2:59122633-59122652 | None:intergenic | 40.0% | |
| AAGGAGTTGAGAAAAGTGGT+AGG | - | chr8_2:59122914-59122933 | None:intergenic | 40.0% | |
| TTACTGACATAGGCCAAAAG+AGG | - | chr8_2:59123096-59123115 | None:intergenic | 40.0% | |
| GTCTCGGCGTTTCAATTATA+AGG | - | chr8_2:59124081-59124100 | None:intergenic | 40.0% | |
| ! | GCATTAACAGTGATGATGTG+GGG | - | chr8_2:59124195-59124214 | None:intergenic | 40.0% |
| ! | CAGCATTAACAGTGATGATG+TGG | - | chr8_2:59124197-59124216 | None:intergenic | 40.0% |
| CACATCATCACTGTTAATGC+TGG | + | chr8_2:59124195-59124214 | Msa1258020:CDS | 40.0% | |
| AGTGATCACACAGATATGAC+AGG | - | chr8_2:59124379-59124398 | None:intergenic | 40.0% | |
| !! | GTGCCTTTTTGAGCATATAG+TGG | + | chr8_2:59124716-59124735 | Msa1258020:intron | 40.0% |
| !! | ACTTATCTCGGTGTTTCTAC+AGG | + | chr8_2:59124764-59124783 | Msa1258020:intron | 40.0% |
| !! | CTTATCTCGGTGTTTCTACA+GGG | + | chr8_2:59124765-59124784 | Msa1258020:intron | 40.0% |
| TCGTTCATGCCAAATGAAAG+TGG | + | chr8_2:59124816-59124835 | Msa1258020:CDS | 40.0% | |
| TTCATGCCAAATGAAAGTGG+AGG | + | chr8_2:59124819-59124838 | Msa1258020:CDS | 40.0% | |
| GTTTGAGTCTCTTAAGCATG+TGG | + | chr8_2:59125072-59125091 | Msa1258020:intron | 40.0% | |
| AACATGTATCTACCAGGTAG+TGG | + | chr8_2:59125345-59125364 | Msa1258020:intron | 40.0% | |
| TAAAACTACCAACCACTACC+TGG | - | chr8_2:59125360-59125379 | None:intergenic | 40.0% | |
| !!! | GGTAGTGGTTGGTAGTTTTA+TGG | + | chr8_2:59125360-59125379 | Msa1258020:intron | 40.0% |
| !! | TAGGTACTGGATCAAGAGTA+GGG | - | chr8_2:59125468-59125487 | None:intergenic | 40.0% |
| !! | ATAGGTACTGGATCAAGAGT+AGG | - | chr8_2:59125469-59125488 | None:intergenic | 40.0% |
| GACACATTAATATCAGCAGC+GGG | - | chr8_2:59125562-59125581 | None:intergenic | 40.0% | |
| ATTAATGTGTCTCTTCCTGG+AGG | + | chr8_2:59125571-59125590 | Msa1258020:CDS | 40.0% | |
| TCCTGGAGGCTAATTTCATA+AGG | + | chr8_2:59125585-59125604 | Msa1258020:exon | 40.0% | |
| ! | TCCTTATGAAATTAGCCTCC+AGG | - | chr8_2:59125589-59125608 | None:intergenic | 40.0% |
| AGGAAAGTGAGCTAACTACT+AGG | - | chr8_2:59125669-59125688 | None:intergenic | 40.0% | |
| !! | CATGGAAAACTTGTTGGTCA+CGG | - | chr8_2:59125729-59125748 | None:intergenic | 40.0% |
| GGAGTTTGGTTGTCTGTTCT+TGG | - | chr8_2:59121303-59121322 | None:intergenic | 45.0% | |
| TAAAAGCTGAACCGCTGATC+CGG | - | chr8_2:59121331-59121350 | None:intergenic | 45.0% | |
| ! | ATCAGCGGTTCAGCTTTTAG+CGG | + | chr8_2:59121332-59121351 | Msa1258020:CDS | 45.0% |
| CTTCCTCTCTTCTTCTTCTC+TGG | - | chr8_2:59121435-59121454 | None:intergenic | 45.0% | |
| ! | CCATCCGCTGCATATTTTCT+CGG | - | chr8_2:59121459-59121478 | None:intergenic | 45.0% |
| ! | GTTTTGCTCACAGAGCTAAC+TGG | - | chr8_2:59121579-59121598 | None:intergenic | 45.0% |
| ATGTGGGACCTCAATAGTTG+TGG | + | chr8_2:59121822-59121841 | Msa1258020:intron | 45.0% | |
| GAAGCACGGATACACTAAAG+TGG | + | chr8_2:59122547-59122566 | Msa1258020:intron | 45.0% | |
| ATACACTAAAGTGGCTTCCG+AGG | + | chr8_2:59122556-59122575 | Msa1258020:intron | 45.0% | |
| GAAAAGTGGTAGGAGGTCAA+TGG | - | chr8_2:59122904-59122923 | None:intergenic | 45.0% | |
| GAGTTGAGAAAAGTGGTAGG+AGG | - | chr8_2:59122911-59122930 | None:intergenic | 45.0% | |
| CTGAGTTGCATGCAATCTAC+CGG | + | chr8_2:59123203-59123222 | Msa1258020:intron | 45.0% | |
| TGAATGACGAATCGCCGTAT+CGG | + | chr8_2:59123453-59123472 | Msa1258020:intron | 45.0% | |
| CATCACTGTTAATGCTGGAG+AGG | + | chr8_2:59124200-59124219 | Msa1258020:CDS | 45.0% | |
| GCACGCACAGTTACTTATCT+CGG | + | chr8_2:59124752-59124771 | Msa1258020:intron | 45.0% | |
| ATGCCAAATGAAAGTGGAGG+AGG | + | chr8_2:59124822-59124841 | Msa1258020:CDS | 45.0% | |
| GTTCCTCCTCCACTTTCATT+TGG | - | chr8_2:59124828-59124847 | None:intergenic | 45.0% | |
| TTTGGCGTGATTCAAGTGGT+CGG | + | chr8_2:59125047-59125066 | Msa1258020:intron | 45.0% | |
| GTCTCTTAAGCATGTGGTCA+TGG | + | chr8_2:59125078-59125097 | Msa1258020:intron | 45.0% | |
| ! | TGTATCTACCAGGTAGTGGT+TGG | + | chr8_2:59125349-59125368 | Msa1258020:intron | 45.0% |
| !!! | GTGGTTGGTAGTTTTATGGC+AGG | + | chr8_2:59125364-59125383 | Msa1258020:CDS | 45.0% |
| TTCTTGGCTTCTGCTCATGT+TGG | - | chr8_2:59125393-59125412 | None:intergenic | 45.0% | |
| AACAACAGCAGGAGATGACA+CGG | - | chr8_2:59125440-59125459 | None:intergenic | 45.0% | |
| ACTGGATCAAGAGTAGGGAT+GGG | - | chr8_2:59125463-59125482 | None:intergenic | 45.0% | |
| TACTGGATCAAGAGTAGGGA+TGG | - | chr8_2:59125464-59125483 | None:intergenic | 45.0% | |
| TCATCAGTAACTTCCTTCCG+TGG | + | chr8_2:59125493-59125512 | Msa1258020:CDS | 45.0% | |
| CTTCCTTCCGTGGAGATAAT+TGG | + | chr8_2:59125503-59125522 | Msa1258020:CDS | 45.0% | |
| AGACCAATTATCTCCACGGA+AGG | - | chr8_2:59125509-59125528 | None:intergenic | 45.0% | |
| CAGCAGACCAATTATCTCCA+CGG | - | chr8_2:59125513-59125532 | None:intergenic | 45.0% | |
| TTATCCTTTGCATCCGATGC+TGG | - | chr8_2:59125538-59125557 | None:intergenic | 45.0% | |
| !!! | ATTTAATTTAATTTAATCAT+AGG | - | chr8_2:59122324-59122343 | None:intergenic | 5.0% |
| !! | TATGATTAAATTAAATTAAA+TGG | + | chr8_2:59122323-59122342 | Msa1258020:intron | 5.0% |
| !! | ATGATTAAATTAAATTAAAT+GGG | + | chr8_2:59122324-59122343 | Msa1258020:intron | 5.0% |
| GTGCCAGAGAAGAAGAAGAG+AGG | + | chr8_2:59121429-59121448 | Msa1258020:CDS | 50.0% | |
| CCGAGAAAATATGCAGCGGA+TGG | + | chr8_2:59121456-59121475 | Msa1258020:CDS | 50.0% | |
| AACGGAGCAGACGACGATAT+CGG | - | chr8_2:59121510-59121529 | None:intergenic | 50.0% | |
| AAATCAATCACCGGCGGCAA+CGG | - | chr8_2:59121528-59121547 | None:intergenic | 50.0% | |
| TCCGCCGTGAAATCAATCAC+CGG | - | chr8_2:59121537-59121556 | None:intergenic | 50.0% | |
| GTGTTGTGCTGTGGTGTGTT+TGG | + | chr8_2:59121715-59121734 | Msa1258020:intron | 50.0% | |
| GGGCAGTGTATTGTGTCAAG+AGG | + | chr8_2:59122129-59122148 | Msa1258020:intron | 50.0% | |
| GCATCATGGTCGGCACATAT+CGG | - | chr8_2:59122591-59122610 | None:intergenic | 50.0% | |
| TGCATGCAATCTACCGGTGT+TGG | + | chr8_2:59123209-59123228 | Msa1258020:intron | 50.0% | |
| !! | CAATCTACCGGTGTTGGTGA+AGG | + | chr8_2:59123215-59123234 | Msa1258020:intron | 50.0% |
| ATCTCCTCCTTCACCAACAC+CGG | - | chr8_2:59123225-59123244 | None:intergenic | 50.0% | |
| AGTGCAGCAGCAATCTGAGA+GGG | - | chr8_2:59123884-59123903 | None:intergenic | 50.0% | |
| GAAAGAATGCATACCGCTCG+AGG | - | chr8_2:59124517-59124536 | None:intergenic | 50.0% | |
| TTCGTCAGCCCGATTCTTCT+GGG | + | chr8_2:59124566-59124585 | Msa1258020:CDS | 50.0% | |
| AATGTGCCCCCAGAAGAATC+GGG | - | chr8_2:59124577-59124596 | None:intergenic | 50.0% | |
| CAATGTGCCCCCAGAAGAAT+CGG | - | chr8_2:59124578-59124597 | None:intergenic | 50.0% | |
| ! | TGGGGGCACATTGACATATG+AGG | + | chr8_2:59124585-59124604 | Msa1258020:CDS | 50.0% |
| GTGTCTTTGGCAAGTCCTGA+TGG | + | chr8_2:59124873-59124892 | Msa1258020:CDS | 50.0% | |
| ! | AGTCCTGATGGACGTGTTGT+TGG | + | chr8_2:59124885-59124904 | Msa1258020:CDS | 50.0% |
| !! | TGGAGGAGTAGCTGGTTTGT+TGG | + | chr8_2:59124908-59124927 | Msa1258020:CDS | 50.0% |
| !! | AGGAGTAGCTGGTTTGTTGG+TGG | + | chr8_2:59124911-59124930 | Msa1258020:CDS | 50.0% |
| TGTCTGTTCTTGGAGCCACG+TGG | - | chr8_2:59121293-59121312 | None:intergenic | 55.0% | |
| GACAACCAAACTCCGACCAC+CGG | + | chr8_2:59121309-59121328 | Msa1258020:CDS | 55.0% | |
| ! | AGCGGTTCAGCTTTTAGCGG+CGG | + | chr8_2:59121335-59121354 | Msa1258020:CDS | 55.0% |
| ! | CTTTTAGCGGCGGTTCAAGC+AGG | + | chr8_2:59121345-59121364 | Msa1258020:intron | 55.0% |
| TCCGCAACAACCGCCGTATA+CGG | + | chr8_2:59121374-59121393 | Msa1258020:CDS | 55.0% | |
| AGCGGATGGTTCAGTGACAG+CGG | + | chr8_2:59121470-59121489 | Msa1258020:CDS | 55.0% | |
| !! | GCAGACGACGATATCGGCTT+CGG | - | chr8_2:59121504-59121523 | None:intergenic | 55.0% |
| ! | GCCGCCGGTGATTGATTTCA+CGG | + | chr8_2:59121530-59121549 | Msa1258020:CDS | 55.0% |
| GCCGTGAAATCAATCACCGG+CGG | - | chr8_2:59121534-59121553 | None:intergenic | 55.0% | |
| ! | GCCGGTGATTGATTTCACGG+CGG | + | chr8_2:59121533-59121552 | Msa1258020:CDS | 55.0% |
| AAGTGGCTTCCGAGGCGTAT+CGG | + | chr8_2:59122564-59122583 | Msa1258020:intron | 55.0% | |
| !! | TCTACCGGTGTTGGTGAAGG+AGG | + | chr8_2:59123218-59123237 | Msa1258020:intron | 55.0% |
| CAGTGCAGCAGCAATCTGAG+AGG | - | chr8_2:59123885-59123904 | None:intergenic | 55.0% | |
| GAATGGGTCCCTTGCTCTGT+TGG | + | chr8_2:59124156-59124175 | Msa1258020:CDS | 55.0% | |
| TTCTCAGCAAGGACCTCGAG+CGG | + | chr8_2:59124501-59124520 | Msa1258020:CDS | 55.0% | |
| CTTCGTCAGCCCGATTCTTC+TGG | + | chr8_2:59124565-59124584 | Msa1258020:CDS | 55.0% | |
| TCGTCAGCCCGATTCTTCTG+GGG | + | chr8_2:59124567-59124586 | Msa1258020:CDS | 55.0% | |
| GGAGGAACACGAAGCAGATC+AGG | + | chr8_2:59124840-59124859 | Msa1258020:CDS | 55.0% | |
| GGAACACGAAGCAGATCAGG+CGG | + | chr8_2:59124843-59124862 | Msa1258020:CDS | 55.0% | |
| AGGCGGCATGAGTGTGTCTT+TGG | + | chr8_2:59124860-59124879 | Msa1258020:CDS | 55.0% | |
| CCACCAACAACACGTCCATC+AGG | - | chr8_2:59124891-59124910 | None:intergenic | 55.0% | |
| ! | CCTGATGGACGTGTTGTTGG+TGG | + | chr8_2:59124888-59124907 | Msa1258020:CDS | 55.0% |
| ! | GATGGACGTGTTGTTGGTGG+AGG | + | chr8_2:59124891-59124910 | Msa1258020:CDS | 55.0% |
| ! | GTTGTTGGTGGAGGAGTAGC+TGG | + | chr8_2:59124900-59124919 | Msa1258020:CDS | 55.0% |
| GTAGGGATGGGAACAACAGC+AGG | - | chr8_2:59125451-59125470 | None:intergenic | 55.0% | |
| TTGGTCTGCTGTGCCAGCAT+CGG | + | chr8_2:59125522-59125541 | Msa1258020:CDS | 55.0% | |
| ! | TGTGCCAGCATCGGATGCAA+AGG | + | chr8_2:59125531-59125550 | Msa1258020:CDS | 55.0% |
| GGTCGGATCAGATGCTCCGT+CGG | + | chr8_2:59121263-59121282 | Msa1258020:CDS | 60.0% | |
| CTGATCCGGTGGTCGGAGTT+TGG | - | chr8_2:59121317-59121336 | None:intergenic | 60.0% | |
| AACTCCGACCACCGGATCAG+CGG | + | chr8_2:59121317-59121336 | Msa1258020:CDS | 60.0% | |
| TGAACCGCTGATCCGGTGGT+CGG | - | chr8_2:59121324-59121343 | None:intergenic | 60.0% | |
| AAGCTGAACCGCTGATCCGG+TGG | - | chr8_2:59121328-59121347 | None:intergenic | 60.0% | |
| GTATACGGCGGTTGTTGCGG+AGG | - | chr8_2:59121375-59121394 | None:intergenic | 60.0% | |
| GCCGTATACGGCGGTTGTTG+CGG | - | chr8_2:59121378-59121397 | None:intergenic | 60.0% | |
| GCAACAACCGCCGTATACGG+CGG | + | chr8_2:59121377-59121396 | Msa1258020:CDS | 60.0% | |
| GTTACCACCGCCGTATACGG+CGG | - | chr8_2:59121387-59121406 | None:intergenic | 60.0% | |
| GCCGTATACGGCGGTGGTAA+CGG | + | chr8_2:59121386-59121405 | Msa1258020:CDS | 60.0% | |
| GCCGTTACCACCGCCGTATA+CGG | - | chr8_2:59121390-59121409 | None:intergenic | 60.0% | |
| TCTGGCACCGTCGTAACTGC+CGG | - | chr8_2:59121417-59121436 | None:intergenic | 60.0% | |
| AGTGGCTTCCGAGGCGTATC+GGG | + | chr8_2:59122565-59122584 | Msa1258020:intron | 60.0% | |
| CATATCGGCCCGATACGCCT+CGG | - | chr8_2:59122576-59122595 | None:intergenic | 60.0% | |
| CGTCAGCCCGATTCTTCTGG+GGG | + | chr8_2:59124568-59124587 | Msa1258020:CDS | 60.0% | |
| GGCGTGATTCAAGTGGTCGG+TGG | + | chr8_2:59125050-59125069 | Msa1258020:intron | 60.0% | |
| ! | TGCTCCGTCGGAGTACCACG+TGG | + | chr8_2:59121275-59121294 | Msa1258020:CDS | 65.0% |
| GGAGCCACGTGGTACTCCGA+CGG | - | chr8_2:59121282-59121301 | None:intergenic | 65.0% | |
| ACAACCGCCGTATACGGCGG+TGG | + | chr8_2:59121380-59121399 | Msa1258020:CDS | 65.0% | |
| GGCGTCTCCGGCAGTTACGA+CGG | + | chr8_2:59121407-59121426 | Msa1258020:CDS | 65.0% | |
| GGTGGCTGCAAGTCCAGTGC+AGG | + | chr8_2:59124929-59124948 | Msa1258020:CDS | 65.0% | |
| !! | GGCGGTGGTAACGGCGTCTC+CGG | + | chr8_2:59121395-59121414 | Msa1258020:CDS | 70.0% |
| GTCGTCTGCTCCGTTGCCGC+CGG | + | chr8_2:59121515-59121534 | Msa1258020:CDS | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8_2 | gene | 59121248 | 59125764 | 59121248 | ID=Msa1258020;Name=Msa1258020 |
| chr8_2 | mRNA | 59121248 | 59125764 | 59121248 | ID=Msa1258020-mRNA-1;Parent=Msa1258020;Name=Msa1258020-mRNA-1;_AED=0.11;_eAED=0.11;_QI=0|0.8|0.66|1|0.6|0.66|6|167|321 |
| chr8_2 | exon | 59121248 | 59121356 | 59121248 | ID=Msa1258020-mRNA-1:exon:18317;Parent=Msa1258020-mRNA-1 |
| chr8_2 | exon | 59121367 | 59121621 | 59121367 | ID=Msa1258020-mRNA-1:exon:18318;Parent=Msa1258020-mRNA-1 |
| chr8_2 | exon | 59124154 | 59124221 | 59124154 | ID=Msa1258020-mRNA-1:exon:18319;Parent=Msa1258020-mRNA-1 |
| chr8_2 | exon | 59124475 | 59124606 | 59124475 | ID=Msa1258020-mRNA-1:exon:18320;Parent=Msa1258020-mRNA-1 |
| chr8_2 | exon | 59124786 | 59124950 | 59124786 | ID=Msa1258020-mRNA-1:exon:18321;Parent=Msa1258020-mRNA-1 |
| chr8_2 | exon | 59125361 | 59125764 | 59125361 | ID=Msa1258020-mRNA-1:exon:18322;Parent=Msa1258020-mRNA-1 |
| chr8_2 | CDS | 59121248 | 59121356 | 59121248 | ID=Msa1258020-mRNA-1:cds;Parent=Msa1258020-mRNA-1 |
| chr8_2 | CDS | 59121367 | 59121621 | 59121367 | ID=Msa1258020-mRNA-1:cds;Parent=Msa1258020-mRNA-1 |
| chr8_2 | CDS | 59124154 | 59124221 | 59124154 | ID=Msa1258020-mRNA-1:cds;Parent=Msa1258020-mRNA-1 |
| chr8_2 | CDS | 59124475 | 59124606 | 59124475 | ID=Msa1258020-mRNA-1:cds;Parent=Msa1258020-mRNA-1 |
| chr8_2 | CDS | 59124786 | 59124950 | 59124786 | ID=Msa1258020-mRNA-1:cds;Parent=Msa1258020-mRNA-1 |
| chr8_2 | CDS | 59125361 | 59125597 | 59125361 | ID=Msa1258020-mRNA-1:cds;Parent=Msa1258020-mRNA-1 |
| chr8_2 | three_prime_UTR | 59125598 | 59125764 | 59125598 | ID=Msa1258020-mRNA-1:three_prime_utr;Parent=Msa1258020-mRNA-1 |
| Gene Sequence |
| Protein sequence |
