AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0663040

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0663040 MtrunA17_Chr8g0392301 92.661 109 8 0 5 113 875 983 9.74e-66 219
Msa0663040 MtrunA17_Chr8g0392301 94.030 67 4 0 159 225 116 182 9.83e-34 127
Msa0663040 MtrunA17_Chr8g0377481 61.667 120 37 2 5 124 855 965 3.99e-41 149
Msa0663040 MtrunA17_Chr8g0377481 54.217 83 22 1 159 225 111 193 1.51e-18 84.0
Msa0663040 MtrunA17_Chr3g0122391 62.963 108 32 1 5 112 913 1012 6.24e-38 140
Msa0663040 MtrunA17_Chr3g0122391 55.422 83 21 1 159 225 159 241 7.04e-19 85.1
Msa0663040 MtrunA17_Chr5g0447641 57.265 117 41 2 4 113 1087 1201 6.33e-36 134
Msa0663040 MtrunA17_Chr5g0447641 51.136 88 28 2 152 225 332 418 1.96e-18 83.6
Msa0663040 MtrunA17_Chr3g0136601 31.148 122 71 2 1 110 814 934 7.81e-12 64.3
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0663040 AT2G01830.1 69.725 109 26 1 5 113 936 1037 2.18e-44 159
Msa0663040 AT2G01830.1 77.941 68 14 1 159 225 181 248 5.57e-27 108
Msa0663040 AT2G01830.4 69.725 109 26 1 5 113 936 1037 2.18e-44 159
Msa0663040 AT2G01830.4 77.941 68 14 1 159 225 181 248 5.57e-27 108
Msa0663040 AT2G01830.6 69.725 109 26 1 5 113 936 1037 2.18e-44 159
Msa0663040 AT2G01830.6 77.941 68 14 1 159 225 181 248 5.57e-27 108
Msa0663040 AT2G01830.3 69.725 109 26 1 5 113 936 1037 2.18e-44 159
Msa0663040 AT2G01830.3 77.941 68 14 1 159 225 181 248 5.57e-27 108
Msa0663040 AT2G01830.5 69.725 109 26 1 5 113 948 1049 2.36e-44 159
Msa0663040 AT2G01830.5 77.941 68 14 1 159 225 193 260 6.08e-27 108
Msa0663040 AT2G01830.2 69.725 109 26 1 5 113 959 1060 2.63e-44 158
Msa0663040 AT2G01830.2 61.702 94 35 1 133 225 178 271 6.77e-27 108
Msa0663040 AT1G27320.1 61.240 129 43 3 1 124 900 1026 3.82e-44 158
Msa0663040 AT1G27320.1 53.012 83 23 1 159 225 169 251 8.92e-18 82.0
Msa0663040 AT5G35750.1 64.103 117 37 2 5 116 1049 1165 7.42e-43 154
Msa0663040 AT5G35750.1 44.776 134 53 4 113 225 255 388 2.78e-19 86.7

Find 286 sgRNAs with CRISPR-Local

Find 462 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GATCTGCACCTTTCTCTTTC+TGG 0.090871 4_4:-1196693 None:intergenic
ACCTTCTTCACCTCAGTTAT+TGG 0.154797 4_4:-1199713 None:intergenic
TAAATTCCGTTTACCTATAT+TGG 0.165693 4_4:+1201122 Msa0663040:CDS
TGCTGGTCATCAAGCAATTT+TGG 0.203159 4_4:+1198587 Msa0663040:five_prime_UTR
GTATGCACCTGTCACATTTA+TGG 0.205722 4_4:+1198100 Msa0663040:five_prime_UTR
ACACTGCCAGCTATGAATTT+TGG 0.226508 4_4:-1198928 None:intergenic
GAAGAAGAGTTCAGAGAAAT+AGG 0.240156 4_4:+1201626 Msa0663040:CDS
GAGAAAGATTCATGGGTTTA+TGG 0.252022 4_4:+1200200 Msa0663040:five_prime_UTR
AGCTTGCCTTCAGCAAGTTT+TGG 0.267697 4_4:+1200395 Msa0663040:five_prime_UTR
TGAGAACCCAACAACCTAAA+AGG 0.270552 4_4:-1198128 None:intergenic
TGAGAACCCAACAACCTAAA+AGG 0.270552 4_4:-1202125 None:intergenic
TTGAAGCAACTCGTCGAATT+CGG 0.272691 4_4:+1201043 Msa0663040:CDS
AGTGAGAAGGAAAGAGGTTT+TGG 0.273718 4_4:+1197708 Msa0663040:five_prime_UTR
AATAAATTTATCGGGCCTTT+TGG 0.277715 4_4:+1202847 Msa0663040:three_prime_UTR
AGCTCTTCTGTTGTTGGGTT+GGG 0.283441 4_4:-1202197 None:intergenic
ATTGGTTGCCATACATGATT+AGG 0.284727 4_4:-1198644 None:intergenic
CTAAGCGCGAGACTAATATT+TGG 0.289326 4_4:+1202888 Msa0663040:three_prime_UTR
GCTGTGCTCGTTAGCTCTTT+TGG 0.293049 4_4:+1202922 Msa0663040:three_prime_UTR
AAAACTCTTCATCAGCAATT+AGG 0.316824 4_4:-1199393 None:intergenic
AGCTCTTCTGTTGTTGGGTT+GGG 0.318692 4_4:-1198200 None:intergenic
TGAAGCAACTCGTCGAATTC+GGG 0.321951 4_4:+1201044 Msa0663040:CDS
AAGGCATGAAAATTCTATCT+TGG 0.329216 4_4:-1199520 None:intergenic
CCATTATCTCTTTCCTATAC+AGG 0.329932 4_4:+1196763 Msa0663040:five_prime_UTR
GTCAAAATAAATAAATTTAT+CGG 0.334602 4_4:+1202838 Msa0663040:three_prime_UTR
GTAACAAAGCACATATAAAA+AGG 0.337845 4_4:+1196647 Msa0663040:five_prime_UTR
GTGTTAGTTGGTGTTGTAAT+GGG 0.339617 4_4:+1201667 Msa0663040:CDS
GGCTTTAAACCCTCTAAAAC+TGG 0.340964 4_4:-1199756 None:intergenic
GTGTTAGCTGGTGTTGTAAT+GGG 0.347004 4_4:+1197493 Msa0663040:five_prime_UTR
GATTTCCAATGATCGGCATT+GGG 0.348809 4_4:-1203182 None:intergenic
GAATCTCCCATAACATTATC+TGG 0.353477 4_4:-1198968 None:intergenic
ATCTAGACTCCGACACGTTC+CGG 0.356468 4_4:+1202793 Msa0663040:three_prime_UTR
TTTATGAGCTCTTCTGTTGT+TGG 0.359330 4_4:-1198206 None:intergenic
ATGTGCTAAACTCCGCATTC+TGG 0.359839 4_4:-1202705 None:intergenic
CAAGTTTGATGCTTGCTTCA+AGG 0.362213 4_4:+1200612 Msa0663040:CDS
GAAAGAGATTTAGTGTTAGT+TGG 0.362266 4_4:+1201655 Msa0663040:CDS
TGGAAATCAAAATTTATTGA+TGG 0.364877 4_4:+1203197 Msa0663040:three_prime_UTR
GGGAGCTTAAATTTGTAAAC+AGG 0.365651 4_4:-1202173 None:intergenic
AAACATCACCTTCTTTGTAT+TGG 0.366658 4_4:-1198662 None:intergenic
CCTCGTCGCAATGGCGGTTC+CGG 0.368561 4_4:+1196550 Msa0663040:five_prime_UTR
AACATTATCTGGATCTTAAT+CGG 0.369883 4_4:-1198957 None:intergenic
ACTAGATTTGTTACAATTTG+TGG 0.369959 4_4:-1198991 None:intergenic
TTAATGAGCTCTTCTGTTGT+TGG 0.370178 4_4:-1202203 None:intergenic
AATTTACTTGGTCAACTTGC+TGG 0.372381 4_4:+1198570 Msa0663040:five_prime_UTR
AACTTTCAGGTTGGGTCTGC+CGG 0.373589 4_4:-1202812 None:intergenic
GGATATTCAAATGCAAGAAA+TGG 0.373656 4_4:+1200633 Msa0663040:CDS
TTTAAAGCCGTTGTGGTTGA+TGG 0.373929 4_4:+1199770 Msa0663040:five_prime_UTR
TTGACTCCAACTTTCAGGTT+GGG 0.377248 4_4:-1202820 None:intergenic
AGTCGCAAACGCCATCAATA+AGG 0.379169 4_4:+1199853 Msa0663040:five_prime_UTR
TTATTGCATCTACAGCAAAA+TGG 0.379494 4_4:+1197672 Msa0663040:five_prime_UTR
GATCTTCAGTGTGCGGCAAC+TGG 0.379917 4_4:+1200232 Msa0663040:five_prime_UTR
GAAACAATGTTTACCTGTAT+AGG 0.381243 4_4:-1196776 None:intergenic
TAATGAGCTCTTCTGTTGTT+GGG 0.382581 4_4:-1202202 None:intergenic
GCATGACGACTTGGATTTCA+TGG 0.383364 4_4:+1202761 Msa0663040:three_prime_UTR
TTGGTTGCCATACATGATTA+GGG 0.384098 4_4:-1198643 None:intergenic
CTAGTCACAGCAGCTCTAAC+AGG 0.385909 4_4:-1199797 None:intergenic
TCAAGCTTTCCATTTGTTGC+GGG 0.386642 4_4:-1199245 None:intergenic
AAAGAGAGGCTTCACAGGTT+AGG 0.389296 4_4:+1198072 Msa0663040:five_prime_UTR
AAAGAGAGGCTTCACAGGTT+AGG 0.389296 4_4:+1201884 Msa0663040:CDS
TCTGCTGTCATGGCCAATAT+AGG 0.397938 4_4:-1201135 None:intergenic
AGAGCTCATAAAGCGACAAC+AGG 0.402382 4_4:+1198217 Msa0663040:five_prime_UTR
GAGGACATCGGCGGATTTAA+CGG 0.403735 4_4:-1196531 None:intergenic
TTATGAACAAGTCACCTAGA+TGG 0.407870 4_4:+1199456 Msa0663040:five_prime_UTR
CTTCTGTTGTTGGGTTGGGA+GGG 0.408038 4_4:-1198196 None:intergenic
CTTCTGTTGTTGGGTTGGGA+GGG 0.408038 4_4:-1202193 None:intergenic
TGAACAATTCCTTCCTCAAA+AGG 0.408776 4_4:-1201219 None:intergenic
GAGCTCTTCTGTTGTTGGGT+TGG 0.410932 4_4:-1198201 None:intergenic
TTATGAGCTCTTCTGTTGTT+GGG 0.411405 4_4:-1198205 None:intergenic
TGGGTAGTCTTTGTGATCAA+AGG 0.412517 4_4:+1197728 Msa0663040:five_prime_UTR
TAAGTGCCTAGCTGAACTAA+TGG 0.413074 4_4:+1199607 Msa0663040:five_prime_UTR
TGTGTCGAAGACACTGGAAT+TGG 0.420012 4_4:+1199482 Msa0663040:five_prime_UTR
AGTGTTAGTTGGTGTTGTAA+TGG 0.422905 4_4:+1201666 Msa0663040:CDS
CTCAAGCTTTCCATTTGTTG+CGG 0.424158 4_4:-1199246 None:intergenic
AACTATGGTGGTACCGGCAT+TGG 0.427397 4_4:+1199572 Msa0663040:five_prime_UTR
AAAACCCCAATGCCGATCAT+TGG 0.430396 4_4:+1203177 Msa0663040:three_prime_UTR
CCTGTATAGGAAAGAGATAA+TGG 0.430433 4_4:-1196763 None:intergenic
CTAGATTTGTTACAATTTGT+GGG 0.431900 4_4:-1198990 None:intergenic
AGCTCGACTTCTAGAAACTA+TGG 0.431958 4_4:+1199557 Msa0663040:five_prime_UTR
AGGCATGAAAATTCTATCTT+GGG 0.434654 4_4:-1199519 None:intergenic
GAGCTCTTCTGTTGTTGGGT+TGG 0.436168 4_4:-1202198 None:intergenic
AAGAGAGGCTTCACAGGTTA+GGG 0.436592 4_4:+1198073 Msa0663040:five_prime_UTR
AAGAGAGGCTTCACAGGTTA+GGG 0.436592 4_4:+1201885 Msa0663040:CDS
TTAAGATCCAGATAATGTTA+TGG 0.440845 4_4:+1198961 Msa0663040:five_prime_UTR
TAAGATCCAGATAATGTTAT+GGG 0.440883 4_4:+1198962 Msa0663040:five_prime_UTR
GGCTTCTACGGGTAATGTTG+TGG 0.441520 4_4:+1202737 Msa0663040:three_prime_UTR
AGTGTTAGCTGGTGTTGTAA+TGG 0.441960 4_4:+1197492 Msa0663040:five_prime_UTR
GGGAGCTTAAATTTGCAAAC+AGG 0.442558 4_4:-1198176 None:intergenic
GAAAGATATTTAGTGTTAGC+TGG 0.447128 4_4:+1197481 Msa0663040:five_prime_UTR
AATAGAAAGCCCGCAACAAA+TGG 0.447886 4_4:+1199236 Msa0663040:five_prime_UTR
TTTATAAGCCGGCCGCAGAT+TGG 0.449436 4_4:+1199644 Msa0663040:five_prime_UTR
GCTTCTACGGGTAATGTTGT+GGG 0.449565 4_4:+1202738 Msa0663040:three_prime_UTR
TCCCTTGTGGAAAATTTACT+TGG 0.449628 4_4:+1198558 Msa0663040:five_prime_UTR
TCTTCTGTTGTTGGGTTGGG+AGG 0.450263 4_4:-1198197 None:intergenic
TCTTCTGTTGTTGGGTTGGG+AGG 0.450263 4_4:-1202194 None:intergenic
TGATTTCCAATGATCGGCAT+TGG 0.452162 4_4:-1203183 None:intergenic
CAAAGAAACAGCCTTATTGA+TGG 0.453163 4_4:-1199864 None:intergenic
TAAGCGCGAGACTAATATTT+GGG 0.454578 4_4:+1202889 Msa0663040:three_prime_UTR
GAAGAAGTTGTGCATACATC+TGG 0.454754 4_4:+1199290 Msa0663040:five_prime_UTR
TGGTCAATGTATATGATGTC+AGG 0.454941 4_4:+1198607 Msa0663040:five_prime_UTR
CATACGGGGACTGGCTTCTA+CGG 0.455310 4_4:+1202725 Msa0663040:three_prime_UTR
AGATGTATGCACAACTTCTT+CGG 0.457816 4_4:-1199288 None:intergenic
TCAAAATAAATAAATTTATC+GGG 0.458085 4_4:+1202839 Msa0663040:three_prime_UTR
GAGTCTATTGATACGATGTC+TGG 0.458498 4_4:+1201953 Msa0663040:exon
TTCAAAGTTCCAAGAACAAA+CGG 0.459844 4_4:+1197561 Msa0663040:five_prime_UTR
CTTGTAAAATAAAGAAAGAA+AGG 0.460221 4_4:+1196615 Msa0663040:five_prime_UTR
GGGTAGTCTTTGTGATCAAA+GGG 0.462700 4_4:+1197729 Msa0663040:five_prime_UTR
TCCAATAACTGAGGTGAAGA+AGG 0.463469 4_4:+1199712 Msa0663040:five_prime_UTR
TCAAAGTTCCAAGAACAAAC+GGG 0.463568 4_4:+1197562 Msa0663040:five_prime_UTR
AATAAGGCTGTTTCTTTGTG+TGG 0.465190 4_4:+1199869 Msa0663040:five_prime_UTR
GCAAAATCAGCACCACCCTT+TGG 0.468680 4_4:+1197537 Msa0663040:five_prime_UTR
GCAAAATCAGCACCACCCTT+TGG 0.468680 4_4:+1201711 Msa0663040:CDS
CTTGGAACTTTGAAGCCAAA+GGG 0.475089 4_4:-1197552 None:intergenic
TTTGACTCCAACTTTCAGGT+TGG 0.476261 4_4:-1202821 None:intergenic
GTTGCTTTGGATCCTTCTGA+TGG 0.479307 4_4:+1197639 Msa0663040:five_prime_UTR
AACATACTGAGAGCTCCTAC+TGG 0.482031 4_4:+1202083 Msa0663040:three_prime_UTR
AGATACCATTTGAAGAGACT+TGG 0.482768 4_4:+1199818 Msa0663040:five_prime_UTR
ACTGATCCCCTAATCATGTA+TGG 0.483235 4_4:+1198636 Msa0663040:five_prime_UTR
GAGCTATCTGCCTTCACAAA+AGG 0.487515 4_4:-1199539 None:intergenic
TCTTCGACACAGACCCATCT+AGG 0.488222 4_4:-1199470 None:intergenic
AAAATCCGCGGTAAATGAAA+AGG 0.489053 4_4:-1199672 None:intergenic
TATGAACAAGTCACCTAGAT+GGG 0.489195 4_4:+1199457 Msa0663040:five_prime_UTR
ATAAGGCTGTTTCTTTGTGT+GGG 0.489234 4_4:+1199870 Msa0663040:five_prime_UTR
TTAATTGGAGGCAGTTATGT+TGG 0.493097 4_4:+1198516 Msa0663040:intron
GAGAACCCAACAACCTAAAA+GGG 0.497618 4_4:-1198127 None:intergenic
GAGAACCCAACAACCTAAAA+GGG 0.497618 4_4:-1202124 None:intergenic
GTATCCCAAGTCTCTTCAAA+TGG 0.499078 4_4:-1199823 None:intergenic
AAGTGCCTAGCTGAACTAAT+GGG 0.499182 4_4:+1199608 Msa0663040:five_prime_UTR
TCATGGCCAATATAGGTAAA+CGG 0.499301 4_4:-1201128 None:intergenic
GTCAAATAAACTTTATAAGC+CGG 0.499856 4_4:+1199633 Msa0663040:five_prime_UTR
TCTGAAAATATCACGCCAAA+AGG 0.500549 4_4:-1202862 None:intergenic
CATCTAAAATGAGTTAAAGA+TGG 0.501537 4_4:-1203116 None:intergenic
TCTTGTAACTTTGAAGCCAA+AGG 0.501836 4_4:-1201727 None:intergenic
AAGCTTGAGACTTATCGAAA+TGG 0.503401 4_4:+1199260 Msa0663040:five_prime_UTR
AATGGAAAGAGAGGCTTCAC+AGG 0.503470 4_4:+1198067 Msa0663040:five_prime_UTR
AATGGAAAGAGAGGCTTCAC+AGG 0.503470 4_4:+1201879 Msa0663040:CDS
CTTGTAACTTTGAAGCCAAA+GGG 0.504290 4_4:-1201726 None:intergenic
TACTAAAGTGAGAAGGAAAG+AGG 0.504630 4_4:+1197702 Msa0663040:five_prime_UTR
TTAAAGCCGTTGTGGTTGAT+GGG 0.511535 4_4:+1199771 Msa0663040:five_prime_UTR
AGACGAACCAACTACCAATC+TGG 0.511911 4_4:+1196717 Msa0663040:five_prime_UTR
GGCAGACCCAACCTGAAAGT+TGG 0.512293 4_4:+1202814 Msa0663040:three_prime_UTR
GAGCTCATTAAAGTGACTGC+AGG 0.512536 4_4:+1202215 Msa0663040:three_prime_UTR
AATGCGGAGTTTAGCACATA+CGG 0.514945 4_4:+1202709 Msa0663040:three_prime_UTR
AGTTTAGCACATACGGGGAC+TGG 0.518029 4_4:+1202716 Msa0663040:three_prime_UTR
GTTGAAACCAGATTGGTAGT+TGG 0.518406 4_4:-1196724 None:intergenic
TGCACCGGTCATATTTGCTC+AGG 0.519789 4_4:+1201915 Msa0663040:CDS
CGAGTTAACTCCTTGTGCAT+AGG 0.521793 4_4:-1198000 None:intergenic
TTCAAATGCAAGAAATGGAC+GGG 0.522978 4_4:+1200638 Msa0663040:CDS
ATGAAGAGTGTTTGAAATGT+GGG 0.523905 4_4:+1201175 Msa0663040:CDS
AACACTCTTCATATGTAGCA+TGG 0.525664 4_4:-1201164 None:intergenic
GAAGCCACTGAGAACTAGTA+TGG 0.525821 4_4:+1200368 Msa0663040:five_prime_UTR
TCAAGAACAAACCTGGTCAA+TGG 0.525913 4_4:-1197828 None:intergenic
TTTAAAGACAATGGAAAGAG+AGG 0.526312 4_4:+1198058 Msa0663040:five_prime_UTR
GATGGAGAGGACGGCGAATG+AGG 0.528403 4_4:+1201068 Msa0663040:CDS
ATGGATTACATCTGCTGTCA+TGG 0.530208 4_4:-1201145 None:intergenic
AATCTAGTCCAGAAAGAGAA+AGG 0.531970 4_4:+1196685 Msa0663040:five_prime_UTR
CAAACTGAAGTTGAACCATC+AGG 0.532569 4_4:-1200453 None:intergenic
AACAGGCAAGAAGAGACAGC+CGG 0.534721 4_4:+1200419 Msa0663040:five_prime_UTR
CATCTACAGCAAAATGGATG+TGG 0.534726 4_4:+1197678 Msa0663040:five_prime_UTR
AAACCCTTCTGCCATTGACC+AGG 0.535215 4_4:+1197817 Msa0663040:five_prime_UTR
CAAATTGTAACAAATCTAGT+TGG 0.537909 4_4:+1198994 Msa0663040:five_prime_UTR
AGTCTGAGCATAGCCACGTT+GGG 0.538627 4_4:-1198850 None:intergenic
AACTCGTCGAATTCGGGAGA+TGG 0.539466 4_4:+1201050 Msa0663040:CDS
TGTAATCTCAAAACGCTAAG+TGG 0.539973 4_4:+1199317 Msa0663040:five_prime_UTR
ACCGAGCCAAAATTCATAGC+TGG 0.540193 4_4:+1198922 Msa0663040:five_prime_UTR
TCTTGGAACTTTGAAGCCAA+AGG 0.542220 4_4:-1197553 None:intergenic
TGTTGTGGGGCATGACGACT+TGG 0.542613 4_4:+1202752 Msa0663040:three_prime_UTR
CGCCGATGTCCTCGTCGCAA+TGG 0.544570 4_4:+1196541 Msa0663040:five_prime_UTR
TGTTTGAAATGTGGGATGGA+TGG 0.544805 4_4:+1201183 Msa0663040:CDS
CATGGGTTTATGGAGAGGAC+GGG 0.545646 4_4:+1200210 Msa0663040:five_prime_UTR
TGTTGGAGCATCCTTTGATG+TGG 0.545960 4_4:+1198533 Msa0663040:five_prime_UTR
AGCGTGTGGGAAGGCTCTGA+TGG 0.546660 4_4:+1198878 Msa0663040:five_prime_UTR
CTGTTCCCAAAACTTGCTGA+AGG 0.546763 4_4:-1200401 None:intergenic
TCTTTCAAGCACATAGAGCC+CGG 0.548288 4_4:+1197602 Msa0663040:five_prime_UTR
TTGTTGGGTTCTCATCATCT+CGG 0.549046 4_4:+1198137 Msa0663040:five_prime_UTR
TTGTTGGGTTCTCATCATCT+CGG 0.549046 4_4:+1202134 Msa0663040:three_prime_UTR
TCATGGGTTTATGGAGAGGA+CGG 0.550693 4_4:+1200209 Msa0663040:five_prime_UTR
CAATGGCAGAAGGGTTTCTG+TGG 0.553560 4_4:-1197811 None:intergenic
GTTAACAACTCTTTGTGCAT+AGG 0.556014 4_4:-1201809 None:intergenic
GGGCTAGCCATAAATGTGAC+AGG 0.559223 4_4:-1198107 None:intergenic
TATGGCAACCAATACAAAGA+AGG 0.561778 4_4:+1198654 Msa0663040:five_prime_UTR
TAGGCCACTCCACTCGGTAG+CGG 0.563486 4_4:-1201790 None:intergenic
GATACCATTTGAAGAGACTT+GGG 0.564437 4_4:+1199819 Msa0663040:five_prime_UTR
ATACGGGGACTGGCTTCTAC+GGG 0.565321 4_4:+1202726 Msa0663040:three_prime_UTR
ACTGATACTCAAACCAATGC+CGG 0.566091 4_4:-1199585 None:intergenic
TATGAAGAGTGTTTGAAATG+TGG 0.566182 4_4:+1201174 Msa0663040:CDS
TCTAGAAACTATGGTGGTAC+CGG 0.567665 4_4:+1199566 Msa0663040:five_prime_UTR
TGTGCATAGGCCACTCCACT+CGG 0.569929 4_4:-1201796 None:intergenic
TACTAATATTCGTAGCAAGA+AGG 0.570683 4_4:-1200293 None:intergenic
ACAGGCAAGAAGAGACAGCC+GGG 0.572058 4_4:+1200420 Msa0663040:five_prime_UTR
CACAAGGGACTCCACATCAA+AGG 0.573882 4_4:-1198544 None:intergenic
TATAAAGACAATGGAAAGAG+AGG 0.575171 4_4:+1201870 Msa0663040:CDS
TAGAGGGTTTAAAGCCGTTG+TGG 0.575392 4_4:+1199763 Msa0663040:five_prime_UTR
ATGCGGAGTTTAGCACATAC+GGG 0.576002 4_4:+1202710 Msa0663040:three_prime_UTR
GTTTCCTGAGCAAATATGAC+CGG 0.576507 4_4:-1201919 None:intergenic
GACTGCTCAAGCGTGTGGGA+AGG 0.578235 4_4:+1198869 Msa0663040:five_prime_UTR
CTCAGACTGCTCAAGCGTGT+GGG 0.579543 4_4:+1198865 Msa0663040:five_prime_UTR
GCAGAAGGGTTTCTGTGGGA+TGG 0.582463 4_4:-1197806 None:intergenic
TAGAGTGGTTATAAAGACAA+TGG 0.582498 4_4:+1201861 Msa0663040:CDS
CTATGCACAAGGAGTTAACT+CGG 0.583746 4_4:+1198001 Msa0663040:five_prime_UTR
CAAACCTGGTCAATGGCAGA+AGG 0.584351 4_4:-1197821 None:intergenic
CGCCATTGCGACGAGGACAT+CGG 0.584744 4_4:-1196543 None:intergenic
CTTTGATGTGGAGTCCCTTG+TGG 0.585799 4_4:+1198545 Msa0663040:five_prime_UTR
CGAATGGTGAATGTAGTGAA+AGG 0.586436 4_4:+1201094 Msa0663040:CDS
ATAACTGAAACTAAATCGAT+CGG 0.586558 4_4:-1196582 None:intergenic
ATTCAAATGCAAGAAATGGA+CGG 0.588460 4_4:+1200637 Msa0663040:CDS
TTGGGTCTGCCGGAACGTGT+CGG 0.588603 4_4:-1202802 None:intergenic
TGGGTCTGTGTCGAAGACAC+TGG 0.590108 4_4:+1199476 Msa0663040:five_prime_UTR
CCACTGAGAACTAGTATGGT+GGG 0.590558 4_4:+1200372 Msa0663040:five_prime_UTR
GCTCAGACTGCTCAAGCGTG+TGG 0.592158 4_4:+1198864 Msa0663040:five_prime_UTR
GATTTAACGGAGGCTTTGTG+CGG 0.592454 4_4:-1196518 None:intergenic
AGCAAGCATCAAACTTGTGA+GGG 0.592861 4_4:-1200606 None:intergenic
AATCGATCGGAGAGTTCTAC+CGG 0.594959 4_4:-1196569 None:intergenic
AGATTCATGGGTTTATGGAG+AGG 0.595133 4_4:+1200205 Msa0663040:five_prime_UTR
GTTTGAGAAGCAGCATAGAG+TGG 0.595646 4_4:+1198034 Msa0663040:five_prime_UTR
GAACACAGTTGAAACCAGAT+TGG 0.599444 4_4:-1196731 None:intergenic
GTCGAATTCGGGAGATGGAG+AGG 0.601823 4_4:+1201055 Msa0663040:CDS
CTTGAGACTTATCGAAATGG+AGG 0.602255 4_4:+1199263 Msa0663040:five_prime_UTR
AACTAATTATAGCCATCAGA+AGG 0.603206 4_4:-1197651 None:intergenic
CGATGTCCTCGTCGCAATGG+CGG 0.604245 4_4:+1196544 Msa0663040:five_prime_UTR
GTTTGAGAAGCAGCATAGAG+TGG 0.605018 4_4:+1201846 Msa0663040:CDS
AGGTACTTCCAATCTGCGGC+CGG 0.607017 4_4:-1199652 None:intergenic
GCCACTGAGAACTAGTATGG+TGG 0.607785 4_4:+1200371 Msa0663040:five_prime_UTR
TTAAACCCTCTAAAACTGGA+TGG 0.609462 4_4:-1199752 None:intergenic
CCGGGAAAAGAGATGCCTGA+TGG 0.609734 4_4:+1200438 Msa0663040:five_prime_UTR
ATGTCAATGGAAGTGACTGC+AGG 0.612140 4_4:+1200511 Msa0663040:CDS
AAGCAAGCATCAAACTTGTG+AGG 0.613257 4_4:-1200607 None:intergenic
AGCTCATTAAAGTGACTGCA+GGG 0.613437 4_4:+1202216 Msa0663040:three_prime_UTR
CAGTCTGAGCATAGCCACGT+TGG 0.613747 4_4:-1198851 None:intergenic
TTCGAAAGGCCGCTACTGAG+TGG 0.614633 4_4:+1197972 Msa0663040:five_prime_UTR
AGTGGAGTGGCCTATGCACA+AGG 0.616457 4_4:+1197990 Msa0663040:five_prime_UTR
GTAGCAAGAAGGATCATTCG+AGG 0.616557 4_4:-1200282 None:intergenic
CACTGTATCACTAAAACATG+CGG 0.616849 4_4:-1200340 None:intergenic
CAGTAGCGGCCTTTCGAAAG+CGG 0.617103 4_4:-1197967 None:intergenic
CTTCTACGGGTAATGTTGTG+GGG 0.617417 4_4:+1202739 Msa0663040:three_prime_UTR
ACATACTGAGAGCTCCTACT+GGG 0.618378 4_4:+1202084 Msa0663040:three_prime_UTR
ATTTCCAATGATCGGCATTG+GGG 0.621764 4_4:-1203181 None:intergenic
TGGTTGCCATACATGATTAG+GGG 0.623830 4_4:-1198642 None:intergenic
AGAGTGTTTGAAATGTGGGA+TGG 0.624246 4_4:+1201179 Msa0663040:CDS
TGCACAAAGAGTTGTTAACT+CGG 0.624623 4_4:+1201813 Msa0663040:CDS
ATGTGGATACTAAAGTGAGA+AGG 0.624715 4_4:+1197695 Msa0663040:five_prime_UTR
TTCGAAAGGCCGCTACCGAG+TGG 0.627077 4_4:+1201781 Msa0663040:CDS
AAACCTGGTCAATGGCAGAA+GGG 0.629084 4_4:-1197820 None:intergenic
GAGTTAACTCGGAAAGAAAG+CGG 0.629773 4_4:+1198012 Msa0663040:five_prime_UTR
ACTCTTCATCAGCAATTAGG+TGG 0.632287 4_4:-1199390 None:intergenic
AATGGCAGAAGGGTTTCTGT+GGG 0.632612 4_4:-1197810 None:intergenic
GGTTAGGGATGAGTATGCAC+CGG 0.635635 4_4:+1201900 Msa0663040:CDS
CGGCTAGGACCGCTTTCGAA+AGG 0.636060 4_4:+1197958 Msa0663040:five_prime_UTR
AAGGCCGCTACCGAGTGGAG+TGG 0.637244 4_4:+1201786 Msa0663040:CDS
CAAAATGATGAAGAATAGCA+AGG 0.637826 4_4:-1203046 None:intergenic
AATTCGGGAGATGGAGAGGA+CGG 0.638289 4_4:+1201059 Msa0663040:CDS
GGAACTTTGAAGCCAAAGGG+TGG 0.640019 4_4:-1197549 None:intergenic
TTGTTAACTCGGAAAGAGAG+CGG 0.640754 4_4:+1201824 Msa0663040:CDS
AACAACCTAAAAGGGCTAGT+CGG 0.642277 4_4:-1202116 None:intergenic
GGGTTCTCATCATCTCGGTG+TGG 0.642737 4_4:+1198142 Msa0663040:five_prime_UTR
GGGTTCTCATCATCTCGGTG+TGG 0.642737 4_4:+1202139 Msa0663040:three_prime_UTR
AAAATGGTGCTTCCAGCACA+GGG 0.643044 4_4:+1199894 Msa0663040:five_prime_UTR
GACCGCCCATTAGTTCAGCT+AGG 0.643366 4_4:-1199613 None:intergenic
CGTAAATATTCCAAAATCCG+CGG 0.647005 4_4:-1199684 None:intergenic
GTAACTTTGAAGCCAAAGGG+TGG 0.650789 4_4:-1201723 None:intergenic
GAAGTTGTGCATACATCTGG+CGG 0.651844 4_4:+1199293 Msa0663040:five_prime_UTR
TATTGATACGATGTCTGGAG+AGG 0.652218 4_4:+1201958 Msa0663040:three_prime_UTR
TGCGGCAACTGGAAACAGAA+CGG 0.653414 4_4:+1200243 Msa0663040:five_prime_UTR
ACGGCGAATGAGGAGACGAA+TGG 0.653590 4_4:+1201078 Msa0663040:CDS
CGGCTAGGACTGCTTTCGAA+AGG 0.654189 4_4:+1201767 Msa0663040:CDS
ATAATGCAGTTCAATAAGCG+AGG 0.657195 4_4:+1199182 Msa0663040:intron
GTCGGAACAAACTTCCCAGT+AGG 0.660421 4_4:-1202098 None:intergenic
ACATCGTATCAATAGACTCA+AGG 0.660613 4_4:-1201949 None:intergenic
TAGGCCACTCCACTCAGTAG+CGG 0.663567 4_4:-1197981 None:intergenic
AGGACGGGATCTTCAGTGTG+CGG 0.664290 4_4:+1200225 Msa0663040:five_prime_UTR
CCGGAACCGCCATTGCGACG+AGG 0.668033 4_4:-1196550 None:intergenic
GATGTGAAGTGTGCAGACAG+CGG 0.669637 4_4:+1200556 Msa0663040:CDS
GAGCTCATAAAGCGACAACA+GGG 0.673425 4_4:+1198218 Msa0663040:five_prime_UTR
AAGGCCGCTACTGAGTGGAG+TGG 0.673580 4_4:+1197977 Msa0663040:five_prime_UTR
TCAGTTTGAAGCCTTCTGTG+CGG 0.678971 4_4:+1200468 Msa0663040:five_prime_UTR
TCGACTTCTAGAAACTATGG+TGG 0.684605 4_4:+1199560 Msa0663040:five_prime_UTR
CAAAGTTCCAAGAACAAACG+GGG 0.685277 4_4:+1197563 Msa0663040:five_prime_UTR
TACGAAGAATCCAATAACTG+AGG 0.689869 4_4:+1199703 Msa0663040:five_prime_UTR
CATTGCGACGAGGACATCGG+CGG 0.690018 4_4:-1196540 None:intergenic
GACATCGGCGGATTTAACGG+AGG 0.690939 4_4:-1196528 None:intergenic
TGTCAGGGAAACATTGCTGA+AGG 0.696155 4_4:+1202656 Msa0663040:intron
TGCCTAGCTGAACTAATGGG+CGG 0.697388 4_4:+1199611 Msa0663040:five_prime_UTR
AGGTTTCCCATCAACCACAA+CGG 0.697501 4_4:-1199777 None:intergenic
GGATGGCTAGAGCATGAACA+TGG 0.699395 4_4:-1197789 None:intergenic
GAAAAGGTACTTCCAATCTG+CGG 0.711886 4_4:-1199656 None:intergenic
TGCGGAGTTTAGCACATACG+GGG 0.722432 4_4:+1202711 Msa0663040:three_prime_UTR
CCCACCATACTAGTTCTCAG+TGG 0.729319 4_4:-1200372 None:intergenic
GAATTGAACTCAACCCAACG+TGG 0.736332 4_4:+1198837 Msa0663040:five_prime_UTR

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TTATTAATTTTTTTTTTTTT+TGG + chr4_4:1200679-1200698 Msa0663040:intron 0.0%
!! ATTAAATGAGTTAAAATATT+TGG + chr4_4:1200140-1200159 Msa0663040:intron 10.0%
!! TGATTTATAAAAAACAATAT+GGG - chr4_4:1201001-1201020 None:intergenic 10.0%
!! ATGATTTATAAAAAACAATA+TGG - chr4_4:1201002-1201021 None:intergenic 10.0%
!! GTCAAAATAAATAAATTTAT+CGG + chr4_4:1202838-1202857 Msa0663040:three_prime_UTR 10.0%
!! TCAAAATAAATAAATTTATC+GGG + chr4_4:1202839-1202858 Msa0663040:three_prime_UTR 10.0%
!!! TTTCTATGTAATTTTTGAAA+TGG + chr4_4:1197135-1197154 Msa0663040:intron 15.0%
!!! TAGTTAATTGAGTATTTTTT+GGG + chr4_4:1197418-1197437 Msa0663040:intron 15.0%
!!! CGATTAATTAACTTTTTAAT+TGG + chr4_4:1198501-1198520 Msa0663040:intron 15.0%
!!! TTAATTAACTTTTTAATTGG+AGG + chr4_4:1198504-1198523 Msa0663040:intron 15.0%
!!! TTTTTAGTGAATTAAAGTTA+AGG + chr4_4:1199957-1199976 Msa0663040:intron 15.0%
!! ATCACTATCATTTATTAAAA+TGG - chr4_4:1202583-1202602 None:intergenic 15.0%
!! AAAAACTTCAGTTATTTATT+TGG - chr4_4:1202997-1203016 None:intergenic 15.0%
!! CTTGTAAAATAAAGAAAGAA+AGG + chr4_4:1196615-1196634 Msa0663040:five_prime_UTR 20.0%
!! TCATTAAAATGCACAAATAT+TGG + chr4_4:1196976-1196995 Msa0663040:intron 20.0%
!! CAATAAAAAAAGGAAAGAAA+GGG - chr4_4:1197109-1197128 None:intergenic 20.0%
!! ACAATAAAAAAAGGAAAGAA+AGG - chr4_4:1197110-1197129 None:intergenic 20.0%
!! GAAAATTCGACAATAAAAAA+AGG - chr4_4:1197119-1197138 None:intergenic 20.0%
!!! GATACTTTACTTTTATCTAA+TGG - chr4_4:1197358-1197377 None:intergenic 20.0%
!!! CTAGTTAATTGAGTATTTTT+TGG + chr4_4:1197417-1197436 Msa0663040:intron 20.0%
!! TTAGTAATGCAAATAACTTA+GGG - chr4_4:1199060-1199079 None:intergenic 20.0%
!! ATTAGTAATGCAAATAACTT+AGG - chr4_4:1199061-1199080 None:intergenic 20.0%
!! CAATGTCATTAATTACAAAA+AGG - chr4_4:1199935-1199954 None:intergenic 20.0%
!! TCTCAACAAAAATAATATCA+GGG - chr4_4:1200184-1200203 None:intergenic 20.0%
!! TTCTCAACAAAAATAATATC+AGG - chr4_4:1200185-1200204 None:intergenic 20.0%
!!! TTTCTGTGTAATTTTTGAAA+TGG + chr4_4:1201382-1201401 Msa0663040:intron 20.0%
!!! ATAAAAGTATCTGAGATTTT+AGG + chr4_4:1201509-1201528 Msa0663040:intron 20.0%
!!! ACTGTTAATTGAGTATTTTT+TGG + chr4_4:1201588-1201607 Msa0663040:intron 20.0%
!!! CTGTTAATTGAGTATTTTTT+GGG + chr4_4:1201589-1201608 Msa0663040:intron 20.0%
!! TGTGTTTAGTATAAAAATCT+TGG + chr4_4:1202324-1202343 Msa0663040:intron 20.0%
!! GTGTTTAGTATAAAAATCTT+GGG + chr4_4:1202325-1202344 Msa0663040:intron 20.0%
!!! AACTGAAGTTTTTTAAGTAA+CGG + chr4_4:1203004-1203023 Msa0663040:three_prime_UTR 20.0%
!!! AAATTTTGATTTCCAATGAT+CGG - chr4_4:1203192-1203211 None:intergenic 20.0%
!! TGGAAATCAAAATTTATTGA+TGG + chr4_4:1203197-1203216 Msa0663040:three_prime_UTR 20.0%
! ATAACTGAAACTAAATCGAT+CGG - chr4_4:1196585-1196604 None:intergenic 25.0%
! GTAACAAAGCACATATAAAA+AGG + chr4_4:1196647-1196666 Msa0663040:five_prime_UTR 25.0%
!!! GTGTTTTTTAAGTCAATGTT+TGG + chr4_4:1196844-1196863 Msa0663040:intron 25.0%
! AGAGAGAGAATTAAAAAGAA+GGG - chr4_4:1197082-1197101 None:intergenic 25.0%
!!! AGTAAAGTATCTGAGATTTT+AGG + chr4_4:1197367-1197386 Msa0663040:intron 25.0%
!!! TTCTCAAATTTTTGTTGCTT+TGG + chr4_4:1197626-1197645 Msa0663040:five_prime_UTR 25.0%
! TATGTTTCATGAGTAATTAG+AGG + chr4_4:1198293-1198312 Msa0663040:intron 25.0%
! GTGTTTGGTATAAAAATCTT+AGG + chr4_4:1198325-1198344 Msa0663040:intron 25.0%
! AACATTATCTGGATCTTAAT+CGG - chr4_4:1198960-1198979 None:intergenic 25.0%
! TTAAGATCCAGATAATGTTA+TGG + chr4_4:1198961-1198980 Msa0663040:five_prime_UTR 25.0%
! TAAGATCCAGATAATGTTAT+GGG + chr4_4:1198962-1198981 Msa0663040:five_prime_UTR 25.0%
!!! CTAGATTTGTTACAATTTGT+GGG - chr4_4:1198993-1199012 None:intergenic 25.0%
!!! ACTAGATTTGTTACAATTTG+TGG - chr4_4:1198994-1199013 None:intergenic 25.0%
! CAAATTGTAACAAATCTAGT+TGG + chr4_4:1198994-1199013 Msa0663040:five_prime_UTR 25.0%
! TACTAATATGCATGTTATGT+TGG + chr4_4:1199074-1199093 Msa0663040:intron 25.0%
! TTGTTCATAAAAATCATTCG+AGG - chr4_4:1199446-1199465 None:intergenic 25.0%
! GTCAAATAAACTTTATAAGC+CGG + chr4_4:1199633-1199652 Msa0663040:five_prime_UTR 25.0%
! TGAGTTAAAATATTTGGTTG+TGG + chr4_4:1200146-1200165 Msa0663040:intron 25.0%
!! TTTTTGTTGAGAAAGATTCA+TGG + chr4_4:1200192-1200211 Msa0663040:five_prime_UTR 25.0%
!! TTTTGTTGAGAAAGATTCAT+GGG + chr4_4:1200193-1200212 Msa0663040:five_prime_UTR 25.0%
!!! AGTTTTTTCTAAATCAGCAA+AGG - chr4_4:1200731-1200750 None:intergenic 25.0%
! TATCATTGAATTTATCAGCA+AGG - chr4_4:1200787-1200806 None:intergenic 25.0%
! ACAAACATAACATGTATAGA+GGG - chr4_4:1200952-1200971 None:intergenic 25.0%
! AACAAACATAACATGTATAG+AGG - chr4_4:1200953-1200972 None:intergenic 25.0%
!! CATGTACTTACATTATTTTC+AGG + chr4_4:1201019-1201038 Msa0663040:intron 25.0%
! TAAATTCCGTTTACCTATAT+TGG + chr4_4:1201122-1201141 Msa0663040:CDS 25.0%
!!! TTGTTTTGTATGAGCATATA+TGG + chr4_4:1201262-1201281 Msa0663040:intron 25.0%
!! TGTATTAGTTAGTATTGAAC+TGG + chr4_4:1201294-1201313 Msa0663040:intron 25.0%
! AATAAAGAGAAAAGTGACAA+AGG - chr4_4:1201347-1201366 None:intergenic 25.0%
!!! GCACGAACTTTTTTATATAT+AGG - chr4_4:1201568-1201587 None:intergenic 25.0%
!! AGAAACTTTTGCAGAATATA+CGG + chr4_4:1201747-1201766 Msa0663040:CDS 25.0%
! TGTTTCATATGAGTAATTAG+AGG + chr4_4:1202293-1202312 Msa0663040:intron 25.0%
!!! TGATGTTTCTTTTTTATGTC+TGG + chr4_4:1202477-1202496 Msa0663040:intron 25.0%
!! CTGAATGTTGACATTTTTAT+TGG + chr4_4:1202633-1202652 Msa0663040:intron 25.0%
!!! GTACTTAATTTTTCAGCTAT+AGG - chr4_4:1203086-1203105 None:intergenic 25.0%
!! CATCTAAAATGAGTTAAAGA+TGG - chr4_4:1203119-1203138 None:intergenic 25.0%
!! CATCTTTAACTCATTTTAGA+TGG + chr4_4:1203117-1203136 Msa0663040:three_prime_UTR 25.0%
GAAACAATGTTTACCTGTAT+AGG - chr4_4:1196779-1196798 None:intergenic 30.0%
! TTTTGTCTTTAAGCAAAGAC+TGG + chr4_4:1196910-1196929 Msa0663040:intron 30.0%
GAGAGAGAGAATTAAAAAGA+AGG - chr4_4:1197083-1197102 None:intergenic 30.0%
TGCTGTAATAATACTGTACT+TGG + chr4_4:1197303-1197322 Msa0663040:intron 30.0%
GAAAGATATTTAGTGTTAGC+TGG + chr4_4:1197481-1197500 Msa0663040:five_prime_UTR 30.0%
TTCAAAGTTCCAAGAACAAA+CGG + chr4_4:1197561-1197580 Msa0663040:five_prime_UTR 30.0%
AACTAATTATAGCCATCAGA+AGG - chr4_4:1197654-1197673 None:intergenic 30.0%
TTATTGCATCTACAGCAAAA+TGG + chr4_4:1197672-1197691 Msa0663040:five_prime_UTR 30.0%
AAAACATTCAAGAACAAACC+TGG - chr4_4:1197838-1197857 None:intergenic 30.0%
!!! ATGTTTTGATCATTCTGTGT+TGG + chr4_4:1197851-1197870 Msa0663040:intron 30.0%
! GGAAACTTTTGCAGAATATA+CGG + chr4_4:1197938-1197957 Msa0663040:intron 30.0%
!!! TAGAGTGGTTTTAAAGACAA+TGG + chr4_4:1198049-1198068 Msa0663040:five_prime_UTR 30.0%
TTTAAAGACAATGGAAAGAG+AGG + chr4_4:1198058-1198077 Msa0663040:five_prime_UTR 30.0%
!! AGTAAACTGTTTCTGTTACA+AGG + chr4_4:1198433-1198452 Msa0663040:intron 30.0%
! ACCAAGTAAATTTTCCACAA+GGG - chr4_4:1198562-1198581 None:intergenic 30.0%
AAACATCACCTTCTTTGTAT+TGG - chr4_4:1198665-1198684 None:intergenic 30.0%
CCAAAAACAAGTTACATTCA+TGG - chr4_4:1198695-1198714 None:intergenic 30.0%
!!! CCATGAATGTAACTTGTTTT+TGG + chr4_4:1198692-1198711 Msa0663040:intron 30.0%
AAAACTCTTCATCAGCAATT+AGG - chr4_4:1199396-1199415 None:intergenic 30.0%
AGGCATGAAAATTCTATCTT+GGG - chr4_4:1199522-1199541 None:intergenic 30.0%
AAGGCATGAAAATTCTATCT+TGG - chr4_4:1199523-1199542 None:intergenic 30.0%
! AATTTTCATGCCTTTTGTGA+AGG + chr4_4:1199529-1199548 Msa0663040:five_prime_UTR 30.0%
TTAAAATATTTGGTTGTGGC+AGG + chr4_4:1200150-1200169 Msa0663040:intron 30.0%
CAACAAAAATAATATCAGGG+TGG - chr4_4:1200181-1200200 None:intergenic 30.0%
TACTAATATTCGTAGCAAGA+AGG - chr4_4:1200296-1200315 None:intergenic 30.0%
!! ATTTTAGTGGTTGATGTCAA+TGG + chr4_4:1200498-1200517 Msa0663040:exon 30.0%
GGATATTCAAATGCAAGAAA+TGG + chr4_4:1200633-1200652 Msa0663040:CDS 30.0%
ATTCAAATGCAAGAAATGGA+CGG + chr4_4:1200637-1200656 Msa0663040:CDS 30.0%
!! TATGAAGAGTGTTTGAAATG+TGG + chr4_4:1201174-1201193 Msa0663040:CDS 30.0%
!! ATGAAGAGTGTTTGAAATGT+GGG + chr4_4:1201175-1201194 Msa0663040:CDS 30.0%
! TTATGTCTCAAAACCTTTTG+AGG + chr4_4:1201206-1201225 Msa0663040:CDS 30.0%
! ATTAGTTAGTATTGAACTGG+TGG + chr4_4:1201297-1201316 Msa0663040:intron 30.0%
!!! TAGTCTAAGATGTTTTGGTT+TGG + chr4_4:1201408-1201427 Msa0663040:intron 30.0%
TGAACTCTTCTTCTTATCTA+TGG - chr4_4:1201619-1201638 None:intergenic 30.0%
GAAAGAGATTTAGTGTTAGT+TGG + chr4_4:1201655-1201674 Msa0663040:CDS 30.0%
TAGAGTGGTTATAAAGACAA+TGG + chr4_4:1201861-1201880 Msa0663040:CDS 30.0%
TATAAAGACAATGGAAAGAG+AGG + chr4_4:1201870-1201889 Msa0663040:CDS 30.0%
AATAAAAACAAGCAGAGGAA+TGG - chr4_4:1202004-1202023 None:intergenic 30.0%
!! ATTTCTCATTTTTGCAATGC+AGG + chr4_4:1202049-1202068 Msa0663040:intron 30.0%
AGCTGAAACATAGTGAAATA+AGG - chr4_4:1202247-1202266 None:intergenic 30.0%
TATGAGTAATTAGAGGATGA+AGG + chr4_4:1202300-1202319 Msa0663040:intron 30.0%
!! TTGACATTTTTATTGGTGTC+AGG + chr4_4:1202640-1202659 Msa0663040:intron 30.0%
!!! TGACATTTTTATTGGTGTCA+GGG + chr4_4:1202641-1202660 Msa0663040:intron 30.0%
!! ACTTTTAACCGACTTTTTGA+TGG + chr4_4:1202682-1202701 Msa0663040:three_prime_UTR 30.0%
!!! TTATTTTGACTCCAACTTTC+AGG - chr4_4:1202828-1202847 None:intergenic 30.0%
! AATAAATTTATCGGGCCTTT+TGG + chr4_4:1202847-1202866 Msa0663040:three_prime_UTR 30.0%
!!! AGACTCGTTATTTTTCAACT+TGG + chr4_4:1202949-1202968 Msa0663040:three_prime_UTR 30.0%
!!! GACTCGTTATTTTTCAACTT+GGG + chr4_4:1202950-1202969 Msa0663040:three_prime_UTR 30.0%
CAAAATGATGAAGAATAGCA+AGG - chr4_4:1203049-1203068 None:intergenic 30.0%
! GCTATTCTTCATCATTTTGT+AGG + chr4_4:1203050-1203069 Msa0663040:three_prime_UTR 30.0%
AATCTAGTCCAGAAAGAGAA+AGG + chr4_4:1196685-1196704 Msa0663040:five_prime_UTR 35.0%
CCTGTATAGGAAAGAGATAA+TGG - chr4_4:1196766-1196785 None:intergenic 35.0%
CCATTATCTCTTTCCTATAC+AGG + chr4_4:1196763-1196782 Msa0663040:five_prime_UTR 35.0%
TAACAACCCTCTTACTCATT+GGG + chr4_4:1196801-1196820 Msa0663040:intron 35.0%
! AATATTGGCTGTTGAGAGAA+TGG + chr4_4:1196991-1197010 Msa0663040:intron 35.0%
! TCTTGTTTCCTAAGACTCTT+AGG + chr4_4:1197242-1197261 Msa0663040:intron 35.0%
CTCTGAACTCTTCATATCTA+TGG - chr4_4:1197448-1197467 None:intergenic 35.0%
TCAAAGTTCCAAGAACAAAC+GGG + chr4_4:1197562-1197581 Msa0663040:five_prime_UTR 35.0%
CAACAAAAATTTGAGAAGCC+GGG - chr4_4:1197623-1197642 None:intergenic 35.0%
GCAACAAAAATTTGAGAAGC+CGG - chr4_4:1197624-1197643 None:intergenic 35.0%
ATGTGGATACTAAAGTGAGA+AGG + chr4_4:1197695-1197714 Msa0663040:five_prime_UTR 35.0%
TACTAAAGTGAGAAGGAAAG+AGG + chr4_4:1197702-1197721 Msa0663040:five_prime_UTR 35.0%
TTCTGCAAAAGTTTCCTGAA+GGG - chr4_4:1197934-1197953 None:intergenic 35.0%
ATTCTGCAAAAGTTTCCTGA+AGG - chr4_4:1197935-1197954 None:intergenic 35.0%
TTATGAGCTCTTCTGTTGTT+GGG - chr4_4:1198208-1198227 None:intergenic 35.0%
TTTATGAGCTCTTCTGTTGT+TGG - chr4_4:1198209-1198228 None:intergenic 35.0%
CATGAGTAATTAGAGGATGA+AGG + chr4_4:1198300-1198319 Msa0663040:intron 35.0%
! AACACTAATAGTGGCATTGA+CGG - chr4_4:1198385-1198404 None:intergenic 35.0%
!! AGTGTCGATAACACTAATAG+TGG - chr4_4:1198394-1198413 None:intergenic 35.0%
TCTGTTACAAGGCTTGTATT+TGG + chr4_4:1198444-1198463 Msa0663040:intron 35.0%
TTAATTGGAGGCAGTTATGT+TGG + chr4_4:1198516-1198535 Msa0663040:intron 35.0%
TCCCTTGTGGAAAATTTACT+TGG + chr4_4:1198558-1198577 Msa0663040:five_prime_UTR 35.0%
! GACCAAGTAAATTTTCCACA+AGG - chr4_4:1198563-1198582 None:intergenic 35.0%
AATTTACTTGGTCAACTTGC+TGG + chr4_4:1198570-1198589 Msa0663040:five_prime_UTR 35.0%
TGGTCAATGTATATGATGTC+AGG + chr4_4:1198607-1198626 Msa0663040:five_prime_UTR 35.0%
TTGGTTGCCATACATGATTA+GGG - chr4_4:1198646-1198665 None:intergenic 35.0%
ATTGGTTGCCATACATGATT+AGG - chr4_4:1198647-1198666 None:intergenic 35.0%
TATGGCAACCAATACAAAGA+AGG + chr4_4:1198654-1198673 Msa0663040:five_prime_UTR 35.0%
GCTACTGTCATTACATATTC+TGG + chr4_4:1198761-1198780 Msa0663040:intron 35.0%
!! CATATTCTGGAACTGACTTT+CGG + chr4_4:1198774-1198793 Msa0663040:intron 35.0%
GAATCTCCCATAACATTATC+TGG - chr4_4:1198971-1198990 None:intergenic 35.0%
! AACAGCAAAAGTGTACTTGA+AGG - chr4_4:1199119-1199138 None:intergenic 35.0%
ATAATGCAGTTCAATAAGCG+AGG + chr4_4:1199182-1199201 Msa0663040:intron 35.0%
AAGCTTGAGACTTATCGAAA+TGG + chr4_4:1199260-1199279 Msa0663040:five_prime_UTR 35.0%
AGATGTATGCACAACTTCTT+CGG - chr4_4:1199291-1199310 None:intergenic 35.0%
TGTAATCTCAAAACGCTAAG+TGG + chr4_4:1199317-1199336 Msa0663040:five_prime_UTR 35.0%
CGATGCTTCAACTAAAAAAG+TGG + chr4_4:1199420-1199439 Msa0663040:five_prime_UTR 35.0%
TTATGAACAAGTCACCTAGA+TGG + chr4_4:1199456-1199475 Msa0663040:five_prime_UTR 35.0%
TATGAACAAGTCACCTAGAT+GGG + chr4_4:1199457-1199476 Msa0663040:five_prime_UTR 35.0%
! AAGTACCTTTTCATTTACCG+CGG + chr4_4:1199667-1199686 Msa0663040:five_prime_UTR 35.0%
AAAATCCGCGGTAAATGAAA+AGG - chr4_4:1199675-1199694 None:intergenic 35.0%
! TTTTCATTTACCGCGGATTT+TGG + chr4_4:1199674-1199693 Msa0663040:five_prime_UTR 35.0%
CGTAAATATTCCAAAATCCG+CGG - chr4_4:1199687-1199706 None:intergenic 35.0%
TACGAAGAATCCAATAACTG+AGG + chr4_4:1199703-1199722 Msa0663040:five_prime_UTR 35.0%
!!! ATCTACCATCCAGTTTTAGA+GGG + chr4_4:1199747-1199766 Msa0663040:five_prime_UTR 35.0%
!! TTAAACCCTCTAAAACTGGA+TGG - chr4_4:1199755-1199774 None:intergenic 35.0%
AGATACCATTTGAAGAGACT+TGG + chr4_4:1199818-1199837 Msa0663040:five_prime_UTR 35.0%
GATACCATTTGAAGAGACTT+GGG + chr4_4:1199819-1199838 Msa0663040:five_prime_UTR 35.0%
!! CAAAGAAACAGCCTTATTGA+TGG - chr4_4:1199867-1199886 None:intergenic 35.0%
!! AATAAGGCTGTTTCTTTGTG+TGG + chr4_4:1199869-1199888 Msa0663040:five_prime_UTR 35.0%
!! ATAAGGCTGTTTCTTTGTGT+GGG + chr4_4:1199870-1199889 Msa0663040:five_prime_UTR 35.0%
GTTTCTTTGTGTGGGAAAAA+TGG + chr4_4:1199878-1199897 Msa0663040:five_prime_UTR 35.0%
ATTAAAAACTTACCCTGTGC+TGG - chr4_4:1199909-1199928 None:intergenic 35.0%
CATCTATAGTCACACATGAT+CGG + chr4_4:1200002-1200021 Msa0663040:intron 35.0%
! TTGCATTTGTTCTTGTTGTG+TGG + chr4_4:1200101-1200120 Msa0663040:intron 35.0%
GAGAAAGATTCATGGGTTTA+TGG + chr4_4:1200200-1200219 Msa0663040:five_prime_UTR 35.0%
CACTGTATCACTAAAACATG+CGG - chr4_4:1200343-1200362 None:intergenic 35.0%
TTCAAATGCAAGAAATGGAC+GGG + chr4_4:1200638-1200657 Msa0663040:CDS 35.0%
TTACGTGCATTCAATTTACG+TGG - chr4_4:1200811-1200830 None:intergenic 35.0%
TCATGGCCAATATAGGTAAA+CGG - chr4_4:1201131-1201150 None:intergenic 35.0%
AACACTCTTCATATGTAGCA+TGG - chr4_4:1201167-1201186 None:intergenic 35.0%
TGAACAATTCCTTCCTCAAA+AGG - chr4_4:1201222-1201241 None:intergenic 35.0%
!! TTTTGAGGAAGGAATTGTTC+AGG + chr4_4:1201221-1201240 Msa0663040:CDS 35.0%
!! GGTCTTAGTCTAAGATGTTT+TGG + chr4_4:1201403-1201422 Msa0663040:intron 35.0%
! TCTCAGATACTTTTATCTGC+TGG - chr4_4:1201505-1201524 None:intergenic 35.0%
GAAGAAGAGTTCAGAGAAAT+AGG + chr4_4:1201626-1201645 Msa0663040:CDS 35.0%
!! AGTGTTAGTTGGTGTTGTAA+TGG + chr4_4:1201666-1201685 Msa0663040:CDS 35.0%
!! GTGTTAGTTGGTGTTGTAAT+GGG + chr4_4:1201667-1201686 Msa0663040:CDS 35.0%
!! CTTGTAACTTTGAAGCCAAA+GGG - chr4_4:1201729-1201748 None:intergenic 35.0%
!! TCTTGTAACTTTGAAGCCAA+AGG - chr4_4:1201730-1201749 None:intergenic 35.0%
GTTAACAACTCTTTGTGCAT+AGG - chr4_4:1201812-1201831 None:intergenic 35.0%
TGCACAAAGAGTTGTTAACT+CGG + chr4_4:1201813-1201832 Msa0663040:CDS 35.0%
ACATCGTATCAATAGACTCA+AGG - chr4_4:1201952-1201971 None:intergenic 35.0%
CCACAAATAAAAACAAGCAG+AGG - chr4_4:1202009-1202028 None:intergenic 35.0%
!!! CCTCTGCTTGTTTTTATTTG+TGG + chr4_4:1202006-1202025 Msa0663040:intron 35.0%
!!! CTGCTTGTTTTTATTTGTGG+AGG + chr4_4:1202009-1202028 Msa0663040:intron 35.0%
GGGAGCTTAAATTTGTAAAC+AGG - chr4_4:1202176-1202195 None:intergenic 35.0%
TAATGAGCTCTTCTGTTGTT+GGG - chr4_4:1202205-1202224 None:intergenic 35.0%
TTAATGAGCTCTTCTGTTGT+TGG - chr4_4:1202206-1202225 None:intergenic 35.0%
! AACACTAATAGTGGCATTGA+CGG - chr4_4:1198385-1198404 None:intergenic 35.0%
! TGTGTCGATAACACTAATAG+TGG - chr4_4:1202402-1202421 None:intergenic 35.0%
GTTGAAGAAAACGTTGTACT+TGG + chr4_4:1202436-1202455 Msa0663040:intron 35.0%
AGAAGACAATGCAAACTGTA+GGG - chr4_4:1202547-1202566 None:intergenic 35.0%
TACAGTCCTTGATTTCTTGA+AGG + chr4_4:1202606-1202625 Msa0663040:intron 35.0%
ACAGTCCTTGATTTCTTGAA+GGG + chr4_4:1202607-1202626 Msa0663040:intron 35.0%
AGTTACCCTTCAAGAAATCA+AGG - chr4_4:1202615-1202634 None:intergenic 35.0%
TCTGAAAATATCACGCCAAA+AGG - chr4_4:1202865-1202884 None:intergenic 35.0%
TAAGCGCGAGACTAATATTT+GGG + chr4_4:1202889-1202908 Msa0663040:three_prime_UTR 35.0%
! GTTGAAACCAGATTGGTAGT+TGG - chr4_4:1196727-1196746 None:intergenic 40.0%
GAACACAGTTGAAACCAGAT+TGG - chr4_4:1196734-1196753 None:intergenic 40.0%
CTAACAACCCTCTTACTCAT+TGG + chr4_4:1196800-1196819 Msa0663040:intron 40.0%
ACAGAACCCAATGAGTAAGA+GGG - chr4_4:1196810-1196829 None:intergenic 40.0%
GAGTACTAATCATGCTCTCT+AGG - chr4_4:1196943-1196962 None:intergenic 40.0%
AGGGAAATTGAGACAAGCTT+GGG - chr4_4:1197063-1197082 None:intergenic 40.0%
AAGGGAAATTGAGACAAGCT+TGG - chr4_4:1197064-1197083 None:intergenic 40.0%
GCTCAATCATTCATCATGCT+TGG + chr4_4:1197199-1197218 Msa0663040:intron 40.0%
! ACTCTTAGGCTAAGAGGTTT+TGG + chr4_4:1197256-1197275 Msa0663040:intron 40.0%
!!! TAGGCTAAGAGGTTTTGGTT+TGG + chr4_4:1197261-1197280 Msa0663040:intron 40.0%
!! AGTGTTAGCTGGTGTTGTAA+TGG + chr4_4:1197492-1197511 Msa0663040:five_prime_UTR 40.0%
!! GTGTTAGCTGGTGTTGTAAT+GGG + chr4_4:1197493-1197512 Msa0663040:five_prime_UTR 40.0%
!! CTTGGAACTTTGAAGCCAAA+GGG - chr4_4:1197555-1197574 None:intergenic 40.0%
!! TCTTGGAACTTTGAAGCCAA+AGG - chr4_4:1197556-1197575 None:intergenic 40.0%
CAAAGTTCCAAGAACAAACG+GGG + chr4_4:1197563-1197582 Msa0663040:five_prime_UTR 40.0%
! TTTTGTTCCCCGTTTGTTCT+TGG - chr4_4:1197573-1197592 None:intergenic 40.0%
CATCTACAGCAAAATGGATG+TGG + chr4_4:1197678-1197697 Msa0663040:five_prime_UTR 40.0%
! AGTGAGAAGGAAAGAGGTTT+TGG + chr4_4:1197708-1197727 Msa0663040:five_prime_UTR 40.0%
! GTGAGAAGGAAAGAGGTTTT+GGG + chr4_4:1197709-1197728 Msa0663040:five_prime_UTR 40.0%
TGGGTAGTCTTTGTGATCAA+AGG + chr4_4:1197728-1197747 Msa0663040:five_prime_UTR 40.0%
GGGTAGTCTTTGTGATCAAA+GGG + chr4_4:1197729-1197748 Msa0663040:five_prime_UTR 40.0%
TCAAGAACAAACCTGGTCAA+TGG - chr4_4:1197831-1197850 None:intergenic 40.0%
TCTGCAAAAGTTTCCTGAAG+GGG - chr4_4:1197933-1197952 None:intergenic 40.0%
! CTTTTGCAGAATATACGGCT+AGG + chr4_4:1197943-1197962 Msa0663040:five_prime_UTR 40.0%
CTATGCACAAGGAGTTAACT+CGG + chr4_4:1198001-1198020 Msa0663040:five_prime_UTR 40.0%
GAGTTAACTCGGAAAGAAAG+CGG + chr4_4:1198012-1198031 Msa0663040:five_prime_UTR 40.0%
GTATGCACCTGTCACATTTA+TGG + chr4_4:1198100-1198119 Msa0663040:five_prime_UTR 40.0%
!! CATTTATGGCTAGCCCTTTT+AGG + chr4_4:1198114-1198133 Msa0663040:five_prime_UTR 40.0%
GAGAACCCAACAACCTAAAA+GGG - chr4_4:1198130-1198149 None:intergenic 40.0%
TGAGAACCCAACAACCTAAA+AGG - chr4_4:1198131-1198150 None:intergenic 40.0%
TTGTTGGGTTCTCATCATCT+CGG + chr4_4:1198137-1198156 Msa0663040:five_prime_UTR 40.0%
GGGAGCTTAAATTTGCAAAC+AGG - chr4_4:1198179-1198198 None:intergenic 40.0%
AGCTGACACGTAGTGAAAAA+AGG - chr4_4:1198249-1198268 None:intergenic 40.0%
! TGCTGGTCATCAAGCAATTT+TGG + chr4_4:1198587-1198606 Msa0663040:five_prime_UTR 40.0%
ACTGATCCCCTAATCATGTA+TGG + chr4_4:1198636-1198655 Msa0663040:five_prime_UTR 40.0%
TGGTTGCCATACATGATTAG+GGG - chr4_4:1198645-1198664 None:intergenic 40.0%
!!! TTGTTTTTGGAGATCCACAC+AGG + chr4_4:1198705-1198724 Msa0663040:intron 40.0%
GGAAACATCGAATGACATGT+AGG + chr4_4:1198726-1198745 Msa0663040:intron 40.0%
ACATCGAATGACATGTAGGT+AGG + chr4_4:1198730-1198749 Msa0663040:intron 40.0%
! ACACTGCCAGCTATGAATTT+TGG - chr4_4:1198931-1198950 None:intergenic 40.0%
GGCAACTCTGTTAAAGTAAG+TGG + chr4_4:1199015-1199034 Msa0663040:intron 40.0%
AATAGAAAGCCCGCAACAAA+TGG + chr4_4:1199236-1199255 Msa0663040:five_prime_UTR 40.0%
! TCAAGCTTTCCATTTGTTGC+GGG - chr4_4:1199248-1199267 None:intergenic 40.0%
! CTCAAGCTTTCCATTTGTTG+CGG - chr4_4:1199249-1199268 None:intergenic 40.0%
CTTGAGACTTATCGAAATGG+AGG + chr4_4:1199263-1199282 Msa0663040:five_prime_UTR 40.0%
GAAGAAGTTGTGCATACATC+TGG + chr4_4:1199290-1199309 Msa0663040:five_prime_UTR 40.0%
ACTCTTCATCAGCAATTAGG+TGG - chr4_4:1199393-1199412 None:intergenic 40.0%
! AGCTCGACTTCTAGAAACTA+TGG + chr4_4:1199557-1199576 Msa0663040:five_prime_UTR 40.0%
! TCGACTTCTAGAAACTATGG+TGG + chr4_4:1199560-1199579 Msa0663040:five_prime_UTR 40.0%
TCTAGAAACTATGGTGGTAC+CGG + chr4_4:1199566-1199585 Msa0663040:five_prime_UTR 40.0%
ACTGATACTCAAACCAATGC+CGG - chr4_4:1199588-1199607 None:intergenic 40.0%
TAAGTGCCTAGCTGAACTAA+TGG + chr4_4:1199607-1199626 Msa0663040:five_prime_UTR 40.0%
AAGTGCCTAGCTGAACTAAT+GGG + chr4_4:1199608-1199627 Msa0663040:five_prime_UTR 40.0%
!! GAAAAGGTACTTCCAATCTG+CGG - chr4_4:1199659-1199678 None:intergenic 40.0%
TCCAATAACTGAGGTGAAGA+AGG + chr4_4:1199712-1199731 Msa0663040:five_prime_UTR 40.0%
ACCTTCTTCACCTCAGTTAT+TGG - chr4_4:1199716-1199735 None:intergenic 40.0%
!! GATCTACCATCCAGTTTTAG+AGG + chr4_4:1199746-1199765 Msa0663040:five_prime_UTR 40.0%
!! GGCTTTAAACCCTCTAAAAC+TGG - chr4_4:1199759-1199778 None:intergenic 40.0%
! TTTAAAGCCGTTGTGGTTGA+TGG + chr4_4:1199770-1199789 Msa0663040:five_prime_UTR 40.0%
TTAAAGCCGTTGTGGTTGAT+GGG + chr4_4:1199771-1199790 Msa0663040:five_prime_UTR 40.0%
GTATCCCAAGTCTCTTCAAA+TGG - chr4_4:1199826-1199845 None:intergenic 40.0%
CGATCATGTGTGACTATAGA+TGG - chr4_4:1200004-1200023 None:intergenic 40.0%
AGATTCATGGGTTTATGGAG+AGG + chr4_4:1200205-1200224 Msa0663040:five_prime_UTR 40.0%
CAAACTGAAGTTGAACCATC+AGG - chr4_4:1200456-1200475 None:intergenic 40.0%
! ATCCGCTCCAAAGTTTTTCA+AGG - chr4_4:1200539-1200558 None:intergenic 40.0%
AGCAAGCATCAAACTTGTGA+GGG - chr4_4:1200609-1200628 None:intergenic 40.0%
AAGCAAGCATCAAACTTGTG+AGG - chr4_4:1200610-1200629 None:intergenic 40.0%
CAAGTTTGATGCTTGCTTCA+AGG + chr4_4:1200612-1200631 Msa0663040:CDS 40.0%
! AATGCACGTAACTTGCATGT+TGG + chr4_4:1200820-1200839 Msa0663040:intron 40.0%
TTGAAGCAACTCGTCGAATT+CGG + chr4_4:1201043-1201062 Msa0663040:CDS 40.0%
CGAATGGTGAATGTAGTGAA+AGG + chr4_4:1201094-1201113 Msa0663040:CDS 40.0%
! ATGGATTACATCTGCTGTCA+TGG - chr4_4:1201148-1201167 None:intergenic 40.0%
! AGAGTGTTTGAAATGTGGGA+TGG + chr4_4:1201179-1201198 Msa0663040:CDS 40.0%
! TGTTTGAAATGTGGGATGGA+TGG + chr4_4:1201183-1201202 Msa0663040:CDS 40.0%
!! GTCTCAAAACCTTTTGAGGA+AGG + chr4_4:1201210-1201229 Msa0663040:CDS 40.0%
! CTTTTGCAGAATATACGGCT+AGG + chr4_4:1197943-1197962 Msa0663040:five_prime_UTR 40.0%
TTGTTAACTCGGAAAGAGAG+CGG + chr4_4:1201824-1201843 Msa0663040:CDS 40.0%
GTTTCCTGAGCAAATATGAC+CGG - chr4_4:1201922-1201941 None:intergenic 40.0%
GAGTCTATTGATACGATGTC+TGG + chr4_4:1201953-1201972 Msa0663040:exon 40.0%
TATTGATACGATGTCTGGAG+AGG + chr4_4:1201958-1201977 Msa0663040:three_prime_UTR 40.0%
! GAGCTCTCAGTATGTTTTCT+CGG - chr4_4:1202079-1202098 None:intergenic 40.0%
! AACAACCTAAAAGGGCTAGT+CGG - chr4_4:1202119-1202138 None:intergenic 40.0%
!!! ACTAGCCCTTTTAGGTTGTT+GGG + chr4_4:1202119-1202138 Msa0663040:three_prime_UTR 40.0%
GAGAACCCAACAACCTAAAA+GGG - chr4_4:1198130-1198149 None:intergenic 40.0%
TGAGAACCCAACAACCTAAA+AGG - chr4_4:1198131-1198150 None:intergenic 40.0%
TTGTTGGGTTCTCATCATCT+CGG + chr4_4:1198137-1198156 Msa0663040:five_prime_UTR 40.0%
AGCTCATTAAAGTGACTGCA+GGG + chr4_4:1202216-1202235 Msa0663040:three_prime_UTR 40.0%
GAAGACAATGCAAACTGTAG+GGG - chr4_4:1202546-1202565 None:intergenic 40.0%
GAGAAGACAATGCAAACTGT+AGG - chr4_4:1202548-1202567 None:intergenic 40.0%
CATTCTGGCCATCAAAAAGT+CGG - chr4_4:1202693-1202712 None:intergenic 40.0%
!! ACTTTTTGATGGCCAGAATG+CGG + chr4_4:1202693-1202712 Msa0663040:three_prime_UTR 40.0%
AATGCGGAGTTTAGCACATA+CGG + chr4_4:1202709-1202728 Msa0663040:three_prime_UTR 40.0%
!! TTGACTCCAACTTTCAGGTT+GGG - chr4_4:1202823-1202842 None:intergenic 40.0%
! TTTGACTCCAACTTTCAGGT+TGG - chr4_4:1202824-1202843 None:intergenic 40.0%
CTAAGCGCGAGACTAATATT+TGG + chr4_4:1202888-1202907 Msa0663040:three_prime_UTR 40.0%
ATTTCCAATGATCGGCATTG+GGG - chr4_4:1203184-1203203 None:intergenic 40.0%
GATTTCCAATGATCGGCATT+GGG - chr4_4:1203185-1203204 None:intergenic 40.0%
TGATTTCCAATGATCGGCAT+TGG - chr4_4:1203186-1203205 None:intergenic 40.0%
! GTGCGGCTTTTACCTATATC+AGG - chr4_4:1196504-1196523 None:intergenic 45.0%
! GATTTAACGGAGGCTTTGTG+CGG - chr4_4:1196521-1196540 None:intergenic 45.0%
AATCGATCGGAGAGTTCTAC+CGG - chr4_4:1196572-1196591 None:intergenic 45.0%
GATCTGCACCTTTCTCTTTC+TGG - chr4_4:1196696-1196715 None:intergenic 45.0%
AGACGAACCAACTACCAATC+TGG + chr4_4:1196717-1196736 Msa0663040:five_prime_UTR 45.0%
CACAGAACCCAATGAGTAAG+AGG - chr4_4:1196811-1196830 None:intergenic 45.0%
!! GAATGGAGAAGGTGCTTCTT+TGG + chr4_4:1197008-1197027 Msa0663040:intron 45.0%
CAAGCTTGGGTCTCAAAAGA+TGG - chr4_4:1197050-1197069 None:intergenic 45.0%
CCTCTTAGCCTAAGAGTCTT+AGG - chr4_4:1197253-1197272 None:intergenic 45.0%
CCTAAGACTCTTAGGCTAAG+AGG + chr4_4:1197250-1197269 Msa0663040:intron 45.0%
TCTTTCAAGCACATAGAGCC+CGG + chr4_4:1197602-1197621 Msa0663040:five_prime_UTR 45.0%
! GTTGCTTTGGATCCTTCTGA+TGG + chr4_4:1197639-1197658 Msa0663040:five_prime_UTR 45.0%
AATGGCAGAAGGGTTTCTGT+GGG - chr4_4:1197813-1197832 None:intergenic 45.0%
AAACCTGGTCAATGGCAGAA+GGG - chr4_4:1197823-1197842 None:intergenic 45.0%
! TGCTTTGATGATTCCCCTTC+AGG + chr4_4:1197917-1197936 Msa0663040:intron 45.0%
CGAGTTAACTCCTTGTGCAT+AGG - chr4_4:1198003-1198022 None:intergenic 45.0%
GTTTGAGAAGCAGCATAGAG+TGG + chr4_4:1198034-1198053 Msa0663040:five_prime_UTR 45.0%
AATGGAAAGAGAGGCTTCAC+AGG + chr4_4:1198067-1198086 Msa0663040:five_prime_UTR 45.0%
AAAGAGAGGCTTCACAGGTT+AGG + chr4_4:1198072-1198091 Msa0663040:five_prime_UTR 45.0%
AAGAGAGGCTTCACAGGTTA+GGG + chr4_4:1198073-1198092 Msa0663040:five_prime_UTR 45.0%
!!! GCTAGCCCTTTTAGGTTGTT+GGG + chr4_4:1198122-1198141 Msa0663040:five_prime_UTR 45.0%
AGCTCTTCTGTTGTTGGGTT+GGG - chr4_4:1198203-1198222 None:intergenic 45.0%
AGAGCTCATAAAGCGACAAC+AGG + chr4_4:1198217-1198236 Msa0663040:five_prime_UTR 45.0%
GAGCTCATAAAGCGACAACA+GGG + chr4_4:1198218-1198237 Msa0663040:five_prime_UTR 45.0%
TAGAGGATGAAGGTCGTGTT+TGG + chr4_4:1198310-1198329 Msa0663040:intron 45.0%
! TGTTGGAGCATCCTTTGATG+TGG + chr4_4:1198533-1198552 Msa0663040:five_prime_UTR 45.0%
GTCATTCGATGTTTCCTGTG+TGG - chr4_4:1198722-1198741 None:intergenic 45.0%
GACATGTAGGTAGGTTCTTC+TGG + chr4_4:1198739-1198758 Msa0663040:intron 45.0%
GAATTGAACTCAACCCAACG+TGG + chr4_4:1198837-1198856 Msa0663040:five_prime_UTR 45.0%
ACCGAGCCAAAATTCATAGC+TGG + chr4_4:1198922-1198941 Msa0663040:five_prime_UTR 45.0%
!!! GCCAGCTATGAATTTTGGCT+CGG - chr4_4:1198926-1198945 None:intergenic 45.0%
GAAGTTGTGCATACATCTGG+CGG + chr4_4:1199293-1199312 Msa0663040:five_prime_UTR 45.0%
TGTGTCGAAGACACTGGAAT+TGG + chr4_4:1199482-1199501 Msa0663040:five_prime_UTR 45.0%
GAGCTATCTGCCTTCACAAA+AGG - chr4_4:1199542-1199561 None:intergenic 45.0%
! TAGAGGGTTTAAAGCCGTTG+TGG + chr4_4:1199763-1199782 Msa0663040:five_prime_UTR 45.0%
AGGTTTCCCATCAACCACAA+CGG - chr4_4:1199780-1199799 None:intergenic 45.0%
AGTCGCAAACGCCATCAATA+AGG + chr4_4:1199853-1199872 Msa0663040:five_prime_UTR 45.0%
AAAAATGGTGCTTCCAGCAC+AGG + chr4_4:1199893-1199912 Msa0663040:five_prime_UTR 45.0%
AAAATGGTGCTTCCAGCACA+GGG + chr4_4:1199894-1199913 Msa0663040:five_prime_UTR 45.0%
TCATGGGTTTATGGAGAGGA+CGG + chr4_4:1200209-1200228 Msa0663040:five_prime_UTR 45.0%
GTAGCAAGAAGGATCATTCG+AGG - chr4_4:1200285-1200304 None:intergenic 45.0%
GAAGCCACTGAGAACTAGTA+TGG + chr4_4:1200368-1200387 Msa0663040:five_prime_UTR 45.0%
CCACTGAGAACTAGTATGGT+GGG + chr4_4:1200372-1200391 Msa0663040:five_prime_UTR 45.0%
! AGCTTGCCTTCAGCAAGTTT+TGG + chr4_4:1200395-1200414 Msa0663040:five_prime_UTR 45.0%
! GCTTGCCTTCAGCAAGTTTT+GGG + chr4_4:1200396-1200415 Msa0663040:five_prime_UTR 45.0%
!! CTGTTCCCAAAACTTGCTGA+AGG - chr4_4:1200404-1200423 None:intergenic 45.0%
!!! CTTCAGCAAGTTTTGGGAAC+AGG + chr4_4:1200402-1200421 Msa0663040:five_prime_UTR 45.0%
! TCAGTTTGAAGCCTTCTGTG+CGG + chr4_4:1200468-1200487 Msa0663040:five_prime_UTR 45.0%
ATGTCAATGGAAGTGACTGC+AGG + chr4_4:1200511-1200530 Msa0663040:CDS 45.0%
! CGCCTTGAAAAACTTTGGAG+CGG + chr4_4:1200534-1200553 Msa0663040:CDS 45.0%
TGAAGCAACTCGTCGAATTC+GGG + chr4_4:1201044-1201063 Msa0663040:CDS 45.0%
TCTGCTGTCATGGCCAATAT+AGG - chr4_4:1201138-1201157 None:intergenic 45.0%
!! GTAACTTTGAAGCCAAAGGG+TGG - chr4_4:1201726-1201745 None:intergenic 45.0%
GTTTGAGAAGCAGCATAGAG+TGG + chr4_4:1198034-1198053 Msa0663040:five_prime_UTR 45.0%
AATGGAAAGAGAGGCTTCAC+AGG + chr4_4:1198067-1198086 Msa0663040:five_prime_UTR 45.0%
AAAGAGAGGCTTCACAGGTT+AGG + chr4_4:1198072-1198091 Msa0663040:five_prime_UTR 45.0%
AAGAGAGGCTTCACAGGTTA+GGG + chr4_4:1198073-1198092 Msa0663040:five_prime_UTR 45.0%
AACATACTGAGAGCTCCTAC+TGG + chr4_4:1202083-1202102 Msa0663040:three_prime_UTR 45.0%
ACATACTGAGAGCTCCTACT+GGG + chr4_4:1202084-1202103 Msa0663040:three_prime_UTR 45.0%
!! TTGTTCCGACTAGCCCTTTT+AGG + chr4_4:1202111-1202130 Msa0663040:three_prime_UTR 45.0%
!!! GACTAGCCCTTTTAGGTTGT+TGG + chr4_4:1202118-1202137 Msa0663040:three_prime_UTR 45.0%
AGCTCTTCTGTTGTTGGGTT+GGG - chr4_4:1198203-1198222 None:intergenic 45.0%
GAGCTCATTAAAGTGACTGC+AGG + chr4_4:1202215-1202234 Msa0663040:three_prime_UTR 45.0%
TGTCAGGGAAACATTGCTGA+AGG + chr4_4:1202656-1202675 Msa0663040:intron 45.0%
ATGTGCTAAACTCCGCATTC+TGG - chr4_4:1202708-1202727 None:intergenic 45.0%
ATGCGGAGTTTAGCACATAC+GGG + chr4_4:1202710-1202729 Msa0663040:three_prime_UTR 45.0%
GCTTCTACGGGTAATGTTGT+GGG + chr4_4:1202738-1202757 Msa0663040:three_prime_UTR 45.0%
CTTCTACGGGTAATGTTGTG+GGG + chr4_4:1202739-1202758 Msa0663040:three_prime_UTR 45.0%
! GCATGACGACTTGGATTTCA+TGG + chr4_4:1202761-1202780 Msa0663040:three_prime_UTR 45.0%
AAAACCCCAATGCCGATCAT+TGG + chr4_4:1203177-1203196 Msa0663040:three_prime_UTR 45.0%
! GAGGACATCGGCGGATTTAA+CGG - chr4_4:1196534-1196553 None:intergenic 50.0%
GGCTGTTGAGAGAATGGAGA+AGG + chr4_4:1196997-1197016 Msa0663040:intron 50.0%
GCAAAATCAGCACCACCCTT+TGG + chr4_4:1197537-1197556 Msa0663040:five_prime_UTR 50.0%
!! GGAACTTTGAAGCCAAAGGG+TGG - chr4_4:1197552-1197571 None:intergenic 50.0%
GGATGGCTAGAGCATGAACA+TGG - chr4_4:1197792-1197811 None:intergenic 50.0%
CAATGGCAGAAGGGTTTCTG+TGG - chr4_4:1197814-1197833 None:intergenic 50.0%
AAACCCTTCTGCCATTGACC+AGG + chr4_4:1197817-1197836 Msa0663040:five_prime_UTR 50.0%
CAAACCTGGTCAATGGCAGA+AGG - chr4_4:1197824-1197843 None:intergenic 50.0%
!! GGGCTAGCCATAAATGTGAC+AGG - chr4_4:1198110-1198129 None:intergenic 50.0%
!!! GGCTAGCCCTTTTAGGTTGT+TGG + chr4_4:1198121-1198140 Msa0663040:five_prime_UTR 50.0%
!! CTTCTGTTGTTGGGTTGGGA+GGG - chr4_4:1198199-1198218 None:intergenic 50.0%
!! TCTTCTGTTGTTGGGTTGGG+AGG - chr4_4:1198200-1198219 None:intergenic 50.0%
GAGCTCTTCTGTTGTTGGGT+TGG - chr4_4:1198204-1198223 None:intergenic 50.0%
CACAAGGGACTCCACATCAA+AGG - chr4_4:1198547-1198566 None:intergenic 50.0%
CTTTGATGTGGAGTCCCTTG+TGG + chr4_4:1198545-1198564 Msa0663040:five_prime_UTR 50.0%
AGTCTGAGCATAGCCACGTT+GGG - chr4_4:1198853-1198872 None:intergenic 50.0%
TCTTCGACACAGACCCATCT+AGG - chr4_4:1199473-1199492 None:intergenic 50.0%
!! AACTATGGTGGTACCGGCAT+TGG + chr4_4:1199572-1199591 Msa0663040:five_prime_UTR 50.0%
TGCCTAGCTGAACTAATGGG+CGG + chr4_4:1199611-1199630 Msa0663040:five_prime_UTR 50.0%
TTTATAAGCCGGCCGCAGAT+TGG + chr4_4:1199644-1199663 Msa0663040:five_prime_UTR 50.0%
! CTAGTCACAGCAGCTCTAAC+AGG - chr4_4:1199800-1199819 None:intergenic 50.0%
CATGGGTTTATGGAGAGGAC+GGG + chr4_4:1200210-1200229 Msa0663040:five_prime_UTR 50.0%
TGCGGCAACTGGAAACAGAA+CGG + chr4_4:1200243-1200262 Msa0663040:five_prime_UTR 50.0%
GCCACTGAGAACTAGTATGG+TGG + chr4_4:1200371-1200390 Msa0663040:five_prime_UTR 50.0%
! CCCACCATACTAGTTCTCAG+TGG - chr4_4:1200375-1200394 None:intergenic 50.0%
AACAGGCAAGAAGAGACAGC+CGG + chr4_4:1200419-1200438 Msa0663040:five_prime_UTR 50.0%
! CCATCAGGCATCTCTTTTCC+CGG - chr4_4:1200441-1200460 None:intergenic 50.0%
GCAGGCGCCTTGAAAAACTT+TGG + chr4_4:1200529-1200548 Msa0663040:CDS 50.0%
GATGTGAAGTGTGCAGACAG+CGG + chr4_4:1200556-1200575 Msa0663040:CDS 50.0%
AACTCGTCGAATTCGGGAGA+TGG + chr4_4:1201050-1201069 Msa0663040:CDS 50.0%
AATTCGGGAGATGGAGAGGA+CGG + chr4_4:1201059-1201078 Msa0663040:CDS 50.0%
GCAAAATCAGCACCACCCTT+TGG + chr4_4:1197537-1197556 Msa0663040:five_prime_UTR 50.0%
GGTTAGGGATGAGTATGCAC+CGG + chr4_4:1198088-1198107 Msa0663040:five_prime_UTR 50.0%
! TGCACCGGTCATATTTGCTC+AGG + chr4_4:1201915-1201934 Msa0663040:CDS 50.0%
GTCGGAACAAACTTCCCAGT+AGG - chr4_4:1202101-1202120 None:intergenic 50.0%
!! CTTCTGTTGTTGGGTTGGGA+GGG - chr4_4:1198199-1198218 None:intergenic 50.0%
!! TCTTCTGTTGTTGGGTTGGG+AGG - chr4_4:1198200-1198219 None:intergenic 50.0%
GAGCTCTTCTGTTGTTGGGT+TGG - chr4_4:1198204-1198223 None:intergenic 50.0%
TGCGGAGTTTAGCACATACG+GGG + chr4_4:1202711-1202730 Msa0663040:three_prime_UTR 50.0%
AGTTTAGCACATACGGGGAC+TGG + chr4_4:1202716-1202735 Msa0663040:three_prime_UTR 50.0%
GGCTTCTACGGGTAATGTTG+TGG + chr4_4:1202737-1202756 Msa0663040:three_prime_UTR 50.0%
ATCTAGACTCCGACACGTTC+CGG + chr4_4:1202793-1202812 Msa0663040:three_prime_UTR 50.0%
!! AACTTTCAGGTTGGGTCTGC+CGG - chr4_4:1202815-1202834 None:intergenic 50.0%
!! GCTGTGCTCGTTAGCTCTTT+TGG + chr4_4:1202922-1202941 Msa0663040:three_prime_UTR 50.0%
! GACATCGGCGGATTTAACGG+AGG - chr4_4:1196531-1196550 None:intergenic 55.0%
GCAGAAGGGTTTCTGTGGGA+TGG - chr4_4:1197809-1197828 None:intergenic 55.0%
CAGTAGCGGCCTTTCGAAAG+CGG - chr4_4:1197970-1197989 None:intergenic 55.0%
TTCGAAAGGCCGCTACTGAG+TGG + chr4_4:1197972-1197991 Msa0663040:five_prime_UTR 55.0%
TAGGCCACTCCACTCAGTAG+CGG - chr4_4:1197984-1198003 None:intergenic 55.0%
AGTGGAGTGGCCTATGCACA+AGG + chr4_4:1197990-1198009 Msa0663040:five_prime_UTR 55.0%
GGGTTCTCATCATCTCGGTG+TGG + chr4_4:1198142-1198161 Msa0663040:five_prime_UTR 55.0%
CAGTCTGAGCATAGCCACGT+TGG - chr4_4:1198854-1198873 None:intergenic 55.0%
CTCAGACTGCTCAAGCGTGT+GGG + chr4_4:1198865-1198884 Msa0663040:five_prime_UTR 55.0%
TGGGTCTGTGTCGAAGACAC+TGG + chr4_4:1199476-1199495 Msa0663040:five_prime_UTR 55.0%
GACCGCCCATTAGTTCAGCT+AGG - chr4_4:1199616-1199635 None:intergenic 55.0%
AGGTACTTCCAATCTGCGGC+CGG - chr4_4:1199655-1199674 None:intergenic 55.0%
AGGACGGGATCTTCAGTGTG+CGG + chr4_4:1200225-1200244 Msa0663040:five_prime_UTR 55.0%
GATCTTCAGTGTGCGGCAAC+TGG + chr4_4:1200232-1200251 Msa0663040:five_prime_UTR 55.0%
ACAGGCAAGAAGAGACAGCC+GGG + chr4_4:1200420-1200439 Msa0663040:five_prime_UTR 55.0%
CCGGGAAAAGAGATGCCTGA+TGG + chr4_4:1200438-1200457 Msa0663040:five_prime_UTR 55.0%
GTCGAATTCGGGAGATGGAG+AGG + chr4_4:1201055-1201074 Msa0663040:CDS 55.0%
ACGGCGAATGAGGAGACGAA+TGG + chr4_4:1201078-1201097 Msa0663040:CDS 55.0%
CGGCTAGGACTGCTTTCGAA+AGG + chr4_4:1201767-1201786 Msa0663040:CDS 55.0%
TGTGCATAGGCCACTCCACT+CGG - chr4_4:1197990-1198009 None:intergenic 55.0%
GGGTTCTCATCATCTCGGTG+TGG + chr4_4:1198142-1198161 Msa0663040:five_prime_UTR 55.0%
!! CATACGGGGACTGGCTTCTA+CGG + chr4_4:1202725-1202744 Msa0663040:three_prime_UTR 55.0%
!! ATACGGGGACTGGCTTCTAC+GGG + chr4_4:1202726-1202745 Msa0663040:three_prime_UTR 55.0%
TGTTGTGGGGCATGACGACT+TGG + chr4_4:1202752-1202771 Msa0663040:three_prime_UTR 55.0%
GGCAGACCCAACCTGAAAGT+TGG + chr4_4:1202814-1202833 Msa0663040:three_prime_UTR 55.0%
CATTGCGACGAGGACATCGG+CGG - chr4_4:1196543-1196562 None:intergenic 60.0%
CGCCATTGCGACGAGGACAT+CGG - chr4_4:1196546-1196565 None:intergenic 60.0%
CGATGTCCTCGTCGCAATGG+CGG + chr4_4:1196544-1196563 Msa0663040:five_prime_UTR 60.0%
CGGCTAGGACCGCTTTCGAA+AGG + chr4_4:1197958-1197977 Msa0663040:five_prime_UTR 60.0%
AAGGCCGCTACTGAGTGGAG+TGG + chr4_4:1197977-1197996 Msa0663040:five_prime_UTR 60.0%
GCTCAGACTGCTCAAGCGTG+TGG + chr4_4:1198864-1198883 Msa0663040:five_prime_UTR 60.0%
GACTGCTCAAGCGTGTGGGA+AGG + chr4_4:1198869-1198888 Msa0663040:five_prime_UTR 60.0%
! AGCGTGTGGGAAGGCTCTGA+TGG + chr4_4:1198878-1198897 Msa0663040:five_prime_UTR 60.0%
GATGGAGAGGACGGCGAATG+AGG + chr4_4:1201068-1201087 Msa0663040:CDS 60.0%
TTCGAAAGGCCGCTACCGAG+TGG + chr4_4:1201781-1201800 Msa0663040:CDS 60.0%
TAGGCCACTCCACTCGGTAG+CGG - chr4_4:1201793-1201812 None:intergenic 60.0%
TTGGGTCTGCCGGAACGTGT+CGG - chr4_4:1202805-1202824 None:intergenic 60.0%
CGCCGATGTCCTCGTCGCAA+TGG + chr4_4:1196541-1196560 Msa0663040:five_prime_UTR 65.0%
CCTCGTCGCAATGGCGGTTC+CGG + chr4_4:1196550-1196569 Msa0663040:five_prime_UTR 65.0%
AAGGCCGCTACCGAGTGGAG+TGG + chr4_4:1201786-1201805 Msa0663040:CDS 65.0%
CCGGAACCGCCATTGCGACG+AGG - chr4_4:1196553-1196572 None:intergenic 70.0%
Chromosome Type Strat End Strand Name
chr4_4 gene 1196498 1203223 1196498 ID=Msa0663040;Name=Msa0663040
chr4_4 mRNA 1196498 1203223 1196498 ID=Msa0663040-mRNA-1;Parent=Msa0663040;Name=Msa0663040-mRNA-1;_AED=0.16;_eAED=0.16;_QI=2404|1|1|1|0.3|0.27|11|754|227
chr4_4 exon 1196498 1196784 1196498 ID=Msa0663040-mRNA-1:exon:414;Parent=Msa0663040-mRNA-1
chr4_4 exon 1197451 1197838 1197451 ID=Msa0663040-mRNA-1:exon:415;Parent=Msa0663040-mRNA-1
chr4_4 exon 1197939 1198239 1197939 ID=Msa0663040-mRNA-1:exon:416;Parent=Msa0663040-mRNA-1
chr4_4 exon 1198530 1198675 1198530 ID=Msa0663040-mRNA-1:exon:417;Parent=Msa0663040-mRNA-1
chr4_4 exon 1198812 1199029 1198812 ID=Msa0663040-mRNA-1:exon:418;Parent=Msa0663040-mRNA-1
chr4_4 exon 1199191 1199915 1199191 ID=Msa0663040-mRNA-1:exon:419;Parent=Msa0663040-mRNA-1
chr4_4 exon 1200172 1200659 1200172 ID=Msa0663040-mRNA-1:exon:420;Parent=Msa0663040-mRNA-1
chr4_4 exon 1201041 1201242 1201041 ID=Msa0663040-mRNA-1:exon:421;Parent=Msa0663040-mRNA-1
chr4_4 exon 1201622 1201979 1201622 ID=Msa0663040-mRNA-1:exon:422;Parent=Msa0663040-mRNA-1
chr4_4 exon 1202071 1202237 1202071 ID=Msa0663040-mRNA-1:exon:423;Parent=Msa0663040-mRNA-1
chr4_4 exon 1202662 1203223 1202662 ID=Msa0663040-mRNA-1:exon:424;Parent=Msa0663040-mRNA-1
chr4_4 five_prime_UTR 1196498 1196784 1196498 ID=Msa0663040-mRNA-1:five_prime_utr;Parent=Msa0663040-mRNA-1
chr4_4 five_prime_UTR 1197451 1197838 1197451 ID=Msa0663040-mRNA-1:five_prime_utr;Parent=Msa0663040-mRNA-1
chr4_4 five_prime_UTR 1197939 1198239 1197939 ID=Msa0663040-mRNA-1:five_prime_utr;Parent=Msa0663040-mRNA-1
chr4_4 five_prime_UTR 1198530 1198675 1198530 ID=Msa0663040-mRNA-1:five_prime_utr;Parent=Msa0663040-mRNA-1
chr4_4 five_prime_UTR 1198812 1199029 1198812 ID=Msa0663040-mRNA-1:five_prime_utr;Parent=Msa0663040-mRNA-1
chr4_4 five_prime_UTR 1199191 1199915 1199191 ID=Msa0663040-mRNA-1:five_prime_utr;Parent=Msa0663040-mRNA-1
chr4_4 five_prime_UTR 1200172 1200510 1200172 ID=Msa0663040-mRNA-1:five_prime_utr;Parent=Msa0663040-mRNA-1
chr4_4 CDS 1200511 1200659 1200511 ID=Msa0663040-mRNA-1:cds;Parent=Msa0663040-mRNA-1
chr4_4 CDS 1201041 1201242 1201041 ID=Msa0663040-mRNA-1:cds;Parent=Msa0663040-mRNA-1
chr4_4 CDS 1201622 1201954 1201622 ID=Msa0663040-mRNA-1:cds;Parent=Msa0663040-mRNA-1
chr4_4 three_prime_UTR 1201955 1201979 1201955 ID=Msa0663040-mRNA-1:three_prime_utr;Parent=Msa0663040-mRNA-1
chr4_4 three_prime_UTR 1202071 1202237 1202071 ID=Msa0663040-mRNA-1:three_prime_utr;Parent=Msa0663040-mRNA-1
chr4_4 three_prime_UTR 1202662 1203223 1202662 ID=Msa0663040-mRNA-1:three_prime_utr;Parent=Msa0663040-mRNA-1
Gene Sequence

>Msa0663040

ATGTCAATGGAAGTGACTGCAGGCGCCTTGAAAAACTTTGGAGCGGATGTGAAGTGTGCAGACAGCGGCAAAGCTGCTCTTGAAATGCTTCTATTCCCTCACAAGTTTGATGCTTGCTTCAAGGATATTCAAATGCAAGAAATGGACGGGTTTGAAGCAACTCGTCGAATTCGGGAGATGGAGAGGACGGCGAATGAGGAGACGAATGGTGAATGTAGTGAAAGGAAAAGTAAATTCCGTTTACCTATATTGGCCATGACAGCAGATGTAATCCATGCTACATATGAAGAGTGTTTGAAATGTGGGATGGATGGTTATGTCTCAAAACCTTTTGAGGAAGGAATTGTTCAGATAAGAAGAAGAGTTCAGAGAAATAGGCAGAAAGAAAGAGATTTAGTGTTAGTTGGTGTTGTAATGGGTCTTCTCTTGAAGATGAAGATGCAAAATCAGCACCACCCTTTGGCTTCAAAGTTACAAGAAACTTTTGCAGAATATACGGCTAGGACTGCTTTCGAAAGGCCGCTACCGAGTGGAGTGGCCTATGCACAAAGAGTTGTTAACTCGGAAAGAGAGCGGTTTGAGAAGCAGCATAGAGTGGTTATAAAGACAATGGAAAGAGAGGCTTCACAGGTTAGGGATGAGTATGCACCGGTCATATTTGCTCAGGAAACTGTCTTACCTTGA
Protein sequence

>Msa0663040

MSMEVTAGALKNFGADVKCADSGKAALEMLLFPHKFDACFKDIQMQEMDGFEATRRIREMERTANEETNGECSERKSKFRLPILAMTADVIHATYEECLKCGMDGYVSKPFEEGIVQIRRRVQRNRQKERDLVLVGVVMGLLLKMKMQNQHHPLASKLQETFAEYTARTAFERPLPSGVAYAQRVVNSERERFEKQHRVVIKTMEREASQVRDEYAPVIFAQETVLP*