AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1420490

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1420490 MtrunA17_Chr8g0392301 91.743 109 9 0 5 113 875 983 2.14e-63 214
Msa1420490 MtrunA17_Chr8g0392301 75.188 133 12 2 132 243 116 248 2.39e-54 189
Msa1420490 MtrunA17_Chr8g0377481 63.889 108 32 1 5 112 855 955 6.90e-39 144
Msa1420490 MtrunA17_Chr8g0377481 45.638 149 44 3 132 243 111 259 3.33e-27 110
Msa1420490 MtrunA17_Chr3g0122391 62.037 108 33 1 5 112 913 1012 3.46e-36 136
Msa1420490 MtrunA17_Chr3g0122391 47.297 148 41 3 132 242 159 306 4.80e-28 113
Msa1420490 MtrunA17_Chr5g0447641 56.410 117 42 2 4 113 1087 1201 4.09e-34 130
Msa1420490 MtrunA17_Chr5g0447641 45.223 157 50 4 125 246 332 487 2.78e-29 116
Msa1420490 MtrunA17_Chr2g0311191 67.442 86 18 3 174 258 22 98 4.64e-26 102
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1420490 AT2G01830.5 65.909 132 23 3 132 241 193 324 3.06e-43 157
Msa1420490 AT2G01830.5 68.807 109 27 1 5 113 948 1049 2.13e-42 155
Msa1420490 AT2G01830.1 65.909 132 23 3 132 241 181 312 3.45e-43 157
Msa1420490 AT2G01830.1 68.807 109 27 1 5 113 936 1037 2.18e-42 155
Msa1420490 AT2G01830.4 65.909 132 23 3 132 241 181 312 3.45e-43 157
Msa1420490 AT2G01830.4 68.807 109 27 1 5 113 936 1037 2.18e-42 155
Msa1420490 AT2G01830.6 65.909 132 23 3 132 241 181 312 3.45e-43 157
Msa1420490 AT2G01830.6 68.807 109 27 1 5 113 936 1037 2.18e-42 155
Msa1420490 AT2G01830.3 65.909 132 23 3 132 241 181 312 3.45e-43 157
Msa1420490 AT2G01830.3 68.807 109 27 1 5 113 936 1037 2.18e-42 155
Msa1420490 AT2G01830.2 65.909 132 23 3 132 241 204 335 3.90e-43 157
Msa1420490 AT2G01830.2 68.807 109 27 1 5 113 959 1060 2.32e-42 155
Msa1420490 AT1G27320.1 63.248 117 38 2 1 112 900 1016 9.34e-42 153
Msa1420490 AT1G27320.1 43.624 149 47 3 132 243 169 317 3.43e-25 105
Msa1420490 AT5G35750.1 63.248 117 38 2 5 116 1049 1165 6.82e-41 150
Msa1420490 AT5G35750.1 48.000 150 43 3 132 246 308 457 2.08e-30 120

Find 370 sgRNAs with CRISPR-Local

Find 719 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GATCTGCACCTTTCTCTTTC+TGG 0.090871 tig0024815:+47199 None:intergenic
CCTTGAGCTGTCTAGAAATT+TGG 0.120024 tig0024815:-50024 Msa1420490:five_prime_UTR
ACCTTCTTCACCTCAGTTAT+TGG 0.154797 tig0024815:+43956 None:intergenic
CATTATTAAGTTTGTACTTT+TGG 0.162606 tig0024815:-48900 Msa1420490:five_prime_UTR
TAAATTCCGTTTACCTATAT+TGG 0.165693 tig0024815:-42545 Msa1420490:CDS
ACACTGCCAGTTATGAATTT+TGG 0.177356 tig0024815:+44736 None:intergenic
AGCTACTGGTAAAGCATTTC+TGG 0.184947 tig0024815:-45548 Msa1420490:five_prime_UTR
GCTGTGCTCGTTGGCTCTTT+TGG 0.262041 tig0024815:-40745 Msa1420490:three_prime_UTR
AGCTTGCCTTCAGCAAGTTT+TGG 0.267697 tig0024815:-43273 Msa1420490:five_prime_UTR
TGAGAACCCAACAACCTAAA+AGG 0.270552 tig0024815:+41542 None:intergenic
TGAGAACCCAACAACCTAAA+AGG 0.270552 tig0024815:+45520 None:intergenic
TTGAAGCAACTCGTCGAATT+CGG 0.272691 tig0024815:-42624 Msa1420490:CDS
AGTGAGAAGGAAAGAGGTTT+TGG 0.273718 tig0024815:-46154 Msa1420490:five_prime_UTR
AATAAATTTATCGGGCCTTT+TGG 0.277715 tig0024815:-40820 Msa1420490:three_prime_UTR
TCCAATCTGAAGCTCGAAAA+TGG 0.279042 tig0024815:-50761 Msa1420490:five_prime_UTR
AGCTCTTCTGTTGTTGGGTT+GGG 0.283441 tig0024815:+41470 None:intergenic
ATTGGTTGCCATACATGATT+AGG 0.284727 tig0024815:+45020 None:intergenic
AAGAATATTGTTCTTATAGA+AGG 0.285105 tig0024815:-48603 Msa1420490:five_prime_UTR
TCTGATTAAGATTAATGTTA+TGG 0.285743 tig0024815:-44708 Msa1420490:five_prime_UTR
CTAAGCGCGAGACTAATATT+TGG 0.289326 tig0024815:-40779 Msa1420490:three_prime_UTR
AGCTGGAGATATCAAGAAAT+TGG 0.296400 tig0024815:-47515 Msa1420490:five_prime_UTR
CAAAAGTACAAACTTAATAA+TGG 0.297310 tig0024815:+48901 None:intergenic
TGAATGCTTGGATATCTATT+AGG 0.305363 tig0024815:+48372 None:intergenic
AAAACTCTTCATCAGCAATT+AGG 0.316824 tig0024815:+44276 None:intergenic
TGAAGCAACTCGTCGAATTC+GGG 0.321951 tig0024815:-42623 Msa1420490:CDS
AAGGCATGAAAATTCTATCT+TGG 0.329216 tig0024815:+44149 None:intergenic
CCATTATCTCTTTCCTATAC+AGG 0.329932 tig0024815:-47129 Msa1420490:five_prime_UTR
GTCAAAATAAATAAATTTAT+CGG 0.334602 tig0024815:-40829 Msa1420490:three_prime_UTR
GTAACAAAGCACATATAAAA+AGG 0.337845 tig0024815:-47245 Msa1420490:five_prime_UTR
CTGATTAAGATTAATGTTAT+GGG 0.339688 tig0024815:-44707 Msa1420490:five_prime_UTR
GAGTGCAGAAGTAATGTAAA+AGG 0.340817 tig0024815:-47431 Msa1420490:five_prime_UTR
GGCTTTAAACCCTCTAAAAC+TGG 0.340964 tig0024815:+43913 None:intergenic
GTGTTAGCTGGTGTTGTAAT+GGG 0.347004 tig0024815:-46369 Msa1420490:intron
GATTTCCAATGATCGGCATT+GGG 0.348809 tig0024815:+40485 None:intergenic
AGCTCTTATGTTGTTGGGTT+GGG 0.355867 tig0024815:+45448 None:intergenic
TAGAAAATAGAGGTTTATAG+AGG 0.356406 tig0024815:+48513 None:intergenic
ATCTAGACTCCGACACGTTC+CGG 0.356468 tig0024815:-40874 Msa1420490:three_prime_UTR
ATGTGCTAAACTCCGCATTC+TGG 0.359839 tig0024815:+40962 None:intergenic
CTCTGAATCTGAACAGTCTT+AGG 0.361731 tig0024815:+50116 None:intergenic
CAAGTTTGATGCTTGCTTCA+AGG 0.362213 tig0024815:-43056 Msa1420490:CDS
CTAACAACCCTCTTACTCAT+TGG 0.363261 tig0024815:-47092 Msa1420490:five_prime_UTR
TGGAAATCAAAATTTATTGA+TGG 0.364877 tig0024815:-40470 Msa1420490:three_prime_UTR
GGGAGCTTAAATTTGTAAAC+AGG 0.365651 tig0024815:+41494 None:intergenic
GGGAGCTTAAATTTGTAAAC+AGG 0.365651 tig0024815:+45472 None:intergenic
AAACATCACCTTCTTTGTAT+TGG 0.366658 tig0024815:+45002 None:intergenic
CCTCGTCGCAATGGCGGTTC+CGG 0.368561 tig0024815:-47344 Msa1420490:five_prime_UTR
TATCCGTGTATCAGTCTATA+TGG 0.368758 tig0024815:-49960 Msa1420490:five_prime_UTR
TAATGAGCTCTTATGTTGTT+GGG 0.369742 tig0024815:+45443 None:intergenic
TTAATGAGCTCTTCTGTTGT+TGG 0.370178 tig0024815:+41464 None:intergenic
CTTAGGCCACTTGTCGAATC+TGG 0.370934 tig0024815:+50133 None:intergenic
TCTAATCCTATTTGATCTCC+TGG 0.371886 tig0024815:+48332 None:intergenic
AATTTACTTGGTCAACTTGC+TGG 0.372381 tig0024815:-45077 Msa1420490:five_prime_UTR
AACTTTCAGGTTGGGTCTGC+CGG 0.373589 tig0024815:+40855 None:intergenic
TTTAAAGCCGTTGTGGTTGA+TGG 0.373929 tig0024815:-43899 Msa1420490:five_prime_UTR
TTGACTCCAACTTTCAGGTT+GGG 0.377248 tig0024815:+40847 None:intergenic
AGTCGCAAACGCCATCAATA+AGG 0.379169 tig0024815:-43816 Msa1420490:five_prime_UTR
TTATTGCATCTACAGCAAAA+TGG 0.379494 tig0024815:-46190 Msa1420490:five_prime_UTR
GATCTTCAGTGTGCGGCAAC+TGG 0.379917 tig0024815:-43436 Msa1420490:five_prime_UTR
GAAACAATGTTTACCTGTAT+AGG 0.381243 tig0024815:+47116 None:intergenic
TAATGAGCTCTTCTGTTGTT+GGG 0.382581 tig0024815:+41465 None:intergenic
GCATGACGACTTGGATTTCA+TGG 0.383364 tig0024815:-40906 Msa1420490:three_prime_UTR
TTAATGAGCTCTTATGTTGT+TGG 0.383934 tig0024815:+45442 None:intergenic
TTGGTTGCCATACATGATTA+GGG 0.384098 tig0024815:+45021 None:intergenic
CTAGTCACAGCAGCTCTAAC+AGG 0.385909 tig0024815:+43872 None:intergenic
TCAAGCTTTCCATTTGTTGC+GGG 0.386642 tig0024815:+44424 None:intergenic
ATTTAATGGACCACACACTA+TGG 0.386966 tig0024815:-48742 Msa1420490:five_prime_UTR
TTTCACTTCGCAAATTTCAT+TGG 0.387078 tig0024815:-50682 Msa1420490:five_prime_UTR
AAAGAGAGGCTTCACAGGTT+AGG 0.389296 tig0024815:-41783 Msa1420490:CDS
AAAGAGAGGCTTCACAGGTT+AGG 0.389296 tig0024815:-45766 Msa1420490:five_prime_UTR
AACTTGTTGATGCTTCAATA+TGG 0.391748 tig0024815:+48432 None:intergenic
GAAAACCCAGGAGATCAAAT+AGG 0.395401 tig0024815:-48338 Msa1420490:five_prime_UTR
GCTACAAATTCAATTAATAA+AGG 0.396305 tig0024815:+48552 None:intergenic
TCTGCTGTCATGGCCAATAT+AGG 0.397938 tig0024815:+42532 None:intergenic
GAGTCTGAAAGGAGATTAAA+CGG 0.402628 tig0024815:+50840 None:intergenic
TTATGAACAAGTCACCTAGA+TGG 0.407870 tig0024815:-44213 Msa1420490:five_prime_UTR
CTTCTGTTGTTGGGTTGGGA+GGG 0.408038 tig0024815:+41474 None:intergenic
TGAACAATTCCTTCCTCAAA+AGG 0.408776 tig0024815:+42448 None:intergenic
TGGGTAGTCTTTGTGATCAA+AGG 0.412517 tig0024815:-46134 Msa1420490:five_prime_UTR
TAAGTGCCTAGCTGAACTAA+TGG 0.413074 tig0024815:-44062 Msa1420490:five_prime_UTR
AACTCGACTTCTAGAAACTA+TGG 0.415251 tig0024815:-44112 Msa1420490:five_prime_UTR
TGTGTCGAAGACACTGGAAT+TGG 0.420012 tig0024815:-44187 Msa1420490:five_prime_UTR
CACAGAACCCAATGAGTAAG+AGG 0.421143 tig0024815:+47084 None:intergenic
GTTGCTTTGTATTCTTCTGA+TGG 0.422242 tig0024815:-46223 Msa1420490:five_prime_UTR
CTCAAGCTTTCCATTTGTTG+CGG 0.424158 tig0024815:+44423 None:intergenic
ACCGAGCCAAAATTCATAAC+TGG 0.425503 tig0024815:-44742 Msa1420490:five_prime_UTR
AACTATGGTGGTACCGGCAT+TGG 0.427397 tig0024815:-44097 Msa1420490:five_prime_UTR
TAACAACCCTCTTACTCATT+GGG 0.429622 tig0024815:-47091 Msa1420490:five_prime_UTR
TGAAATTTGCGAAGTGAAAA+CGG 0.429932 tig0024815:+50686 None:intergenic
CCAATCGGATATTGAATGCT+TGG 0.430148 tig0024815:+48360 None:intergenic
AAAACCCCAATGCCGATCAT+TGG 0.430396 tig0024815:-40490 Msa1420490:three_prime_UTR
CCTGTATAGGAAAGAGATAA+TGG 0.430433 tig0024815:+47129 None:intergenic
CTGAAGGTGGTGGAGGGGAA+AGG 0.432104 tig0024815:-47897 Msa1420490:intron
ACCGGAGCTGAAGGTGGTGG+AGG 0.432907 tig0024815:-47904 Msa1420490:intron
TTTATAAGCCGGCCACAGAT+TGG 0.433400 tig0024815:-44025 Msa1420490:five_prime_UTR
AGGCATGAAAATTCTATCTT+GGG 0.434654 tig0024815:+44150 None:intergenic
GAGCTCTTCTGTTGTTGGGT+TGG 0.436168 tig0024815:+41469 None:intergenic
AAGAGAGGCTTCACAGGTTA+GGG 0.436592 tig0024815:-41782 Msa1420490:CDS
AAGAGAGGCTTCACAGGTTA+GGG 0.436592 tig0024815:-45765 Msa1420490:five_prime_UTR
GGCTTCTACGGGTAATGTTG+TGG 0.441520 tig0024815:-40930 Msa1420490:exon
AGTGTTAGCTGGTGTTGTAA+TGG 0.441960 tig0024815:-46370 Msa1420490:intron
TTAATTGGAGGTAGTTATGT+TGG 0.442968 tig0024815:-45131 Msa1420490:intron
TTTCAACATTTAGCATGTAC+TGG 0.443851 tig0024815:-49848 Msa1420490:five_prime_UTR
TATCAGTCTATATGGTTTGT+AGG 0.444423 tig0024815:-49952 Msa1420490:five_prime_UTR
AGCGGTCCTAGCCGTATATT+CGG 0.445484 tig0024815:+45889 None:intergenic
GTTGGTGGCGATGGCGGTTG+CGG 0.446160 tig0024815:-47805 Msa1420490:five_prime_UTR
AATAGAAAGCCCGCAACAAA+TGG 0.447886 tig0024815:-44433 Msa1420490:five_prime_UTR
GCTTCTACGGGTAATGTTGT+GGG 0.449565 tig0024815:-40929 Msa1420490:exon
TCCCTTGTGGAAAATTTACT+TGG 0.449628 tig0024815:-45089 Msa1420490:five_prime_UTR
TCTTCTGTTGTTGGGTTGGG+AGG 0.450263 tig0024815:+41473 None:intergenic
GCCACCACCACCTTCAGCTC+CGG 0.450368 tig0024815:+48257 None:intergenic
TGATTTCCAATGATCGGCAT+TGG 0.452162 tig0024815:+40484 None:intergenic
CAAAGAAACAGCCTTATTGA+TGG 0.453163 tig0024815:+43805 None:intergenic
TAAGCGCGAGACTAATATTT+GGG 0.454578 tig0024815:-40778 Msa1420490:three_prime_UTR
GAAGAAGTTGTGCATACATC+TGG 0.454754 tig0024815:-44379 Msa1420490:five_prime_UTR
GGATATTCAAATGCAAGAAA+AGG 0.455195 tig0024815:-43035 Msa1420490:CDS
CATACGGGGACTGGCTTCTA+CGG 0.455310 tig0024815:-40942 Msa1420490:CDS
ACTTGAACCTTCAGCTGAAA+AGG 0.457162 tig0024815:+48458 None:intergenic
AGATGTATGCACAACTTCTT+CGG 0.457816 tig0024815:+44381 None:intergenic
TCAAAATAAATAAATTTATC+GGG 0.458085 tig0024815:-40828 Msa1420490:three_prime_UTR
TTCAAAGTTCCAAGAACAAA+CGG 0.459844 tig0024815:-46301 Msa1420490:five_prime_UTR
GGGTAGTCTTTGTGATCAAA+GGG 0.462700 tig0024815:-46133 Msa1420490:five_prime_UTR
TCCAATAACTGAGGTGAAGA+AGG 0.463469 tig0024815:-43957 Msa1420490:five_prime_UTR
TCAAAGTTCCAAGAACAAAC+GGG 0.463568 tig0024815:-46300 Msa1420490:five_prime_UTR
AATAAGGCTGTTTCTTTGTG+TGG 0.465190 tig0024815:-43800 Msa1420490:five_prime_UTR
GCAAAATCAGCACCACCCTT+TGG 0.468680 tig0024815:-41956 Msa1420490:CDS
GCAAAATCAGCACCACCCTT+TGG 0.468680 tig0024815:-46325 Msa1420490:five_prime_UTR
TCTTATGTTGTTGGGTTGGG+AGG 0.468813 tig0024815:+45451 None:intergenic
GTGACGGCCACACCTGATAT+AGG 0.469948 tig0024815:-47404 Msa1420490:five_prime_UTR
CTTATGTTGTTGGGTTGGGA+GGG 0.470141 tig0024815:+45452 None:intergenic
ATGGATGAAGTTGGTGGCGA+TGG 0.473168 tig0024815:-47814 Msa1420490:five_prime_UTR
GTCAAATAAACTTTATAAGC+CGG 0.473292 tig0024815:-44036 Msa1420490:five_prime_UTR
CTTGGAACTTTGAAGCCAAA+GGG 0.475089 tig0024815:+46310 None:intergenic
TTTGACTCCAACTTTCAGGT+TGG 0.476261 tig0024815:+40846 None:intergenic
CAGAAGTAATGTAAAAGGTA+AGG 0.479588 tig0024815:-47426 Msa1420490:five_prime_UTR
GAGCTCTTATGTTGTTGGGT+TGG 0.479818 tig0024815:+45447 None:intergenic
AACATACTGAGAGCTCCTAC+TGG 0.482031 tig0024815:-41584 Msa1420490:CDS
AGATACCATTTGAAGAGACT+TGG 0.482768 tig0024815:-43851 Msa1420490:five_prime_UTR
ACTGATCCCCTAATCATGTA+TGG 0.483235 tig0024815:-45028 Msa1420490:five_prime_UTR
AGGACCGATGGAGTTGTAGA+TGG 0.484578 tig0024815:-47874 Msa1420490:five_prime_UTR
ACTATTGCTGCTGTGCTCGT+TGG 0.485368 tig0024815:-40754 Msa1420490:three_prime_UTR
CATGGGTTTGTGGAGAGGAC+GGG 0.486989 tig0024815:-43458 Msa1420490:five_prime_UTR
AGACGAACAAACTACCAATC+TGG 0.488070 tig0024815:-47175 Msa1420490:five_prime_UTR
TCTTCGACACAGACCCATCT+AGG 0.488222 tig0024815:+44199 None:intergenic
AAAATCCGCGGTAAATGAAA+AGG 0.489053 tig0024815:+43997 None:intergenic
CGAGTTAACTCTTTGTGCAT+AGG 0.489096 tig0024815:+45838 None:intergenic
TATGAACAAGTCACCTAGAT+GGG 0.489195 tig0024815:-44212 Msa1420490:five_prime_UTR
ATAAGGCTGTTTCTTTGTGT+GGG 0.489234 tig0024815:-43799 Msa1420490:five_prime_UTR
GAGTTATCTGCCTTCACAAA+AGG 0.489687 tig0024815:+44130 None:intergenic
TTGTAGATGGTGGTGGCGAA+AGG 0.493499 tig0024815:-47861 Msa1420490:five_prime_UTR
GAGAACCCAACAACCTAAAA+GGG 0.497618 tig0024815:+41543 None:intergenic
GAGAACCCAACAACCTAAAA+GGG 0.497618 tig0024815:+45521 None:intergenic
CCGGAGCTGAAGGTGGTGGA+GGG 0.497991 tig0024815:-47903 Msa1420490:intron
GTTGAAGTTGGCGGTGGCAC+CGG 0.498250 tig0024815:-48276 Msa1420490:five_prime_UTR
GTATCCCAAGTCTCTTCAAA+TGG 0.499078 tig0024815:+43846 None:intergenic
AAGTGCCTAGCTGAACTAAT+GGG 0.499182 tig0024815:-44061 Msa1420490:five_prime_UTR
TCATGGCCAATATAGGTAAA+CGG 0.499301 tig0024815:+42539 None:intergenic
TCTGAAAATATCACGCCAAA+AGG 0.500549 tig0024815:+40805 None:intergenic
CATCTAAAATGAGTTAAAGA+TGG 0.501537 tig0024815:+40551 None:intergenic
TTCAGATTCAGAGGAAGAAG+AGG 0.501652 tig0024815:-50106 Msa1420490:five_prime_UTR
TCTTGTAACTTTGAAGCCAA+AGG 0.501836 tig0024815:+41940 None:intergenic
GAGTTCGATGCGATGGCGAA+AGG 0.502422 tig0024815:-48311 Msa1420490:five_prime_UTR
TAAGAATATCTAGAAAATAG+AGG 0.503004 tig0024815:+48503 None:intergenic
AAGCTTGAGACTTATCGAAA+TGG 0.503401 tig0024815:-44409 Msa1420490:five_prime_UTR
AATGGAAAGAGAGGCTTCAC+AGG 0.503470 tig0024815:-41788 Msa1420490:CDS
AATGGAAAGAGAGGCTTCAC+AGG 0.503470 tig0024815:-45771 Msa1420490:five_prime_UTR
GGCGGTGGCACCGGAGCTGA+AGG 0.503621 tig0024815:-48267 Msa1420490:intron
CTTGTAACTTTGAAGCCAAA+GGG 0.504290 tig0024815:+41941 None:intergenic
TACTAAAGTGAGAAGGAAAG+AGG 0.504630 tig0024815:-46160 Msa1420490:five_prime_UTR
CTAATCCTATTTGATCTCCT+GGG 0.505911 tig0024815:+48333 None:intergenic
TTAAAGCCGTTGTGGTTGAT+GGG 0.511535 tig0024815:-43898 Msa1420490:five_prime_UTR
GGCAGACCCAACCTGAAAGT+TGG 0.512293 tig0024815:-40853 Msa1420490:three_prime_UTR
ATTGGAGGTAGTTATGTTGG+AGG 0.513150 tig0024815:-45128 Msa1420490:intron
TGAGCTATCTTGATGGATGT+AGG 0.513496 tig0024815:-49013 Msa1420490:five_prime_UTR
GATGGCGGTTGCGGTGGTGT+TGG 0.513633 tig0024815:-47796 Msa1420490:five_prime_UTR
AATGCGGAGTTTAGCACATA+CGG 0.514945 tig0024815:-40958 Msa1420490:CDS
TGCACCTGTCACATTTGCTC+AGG 0.517781 tig0024815:-45735 Msa1420490:five_prime_UTR
AGTTTAGCACATACGGGGAC+TGG 0.518029 tig0024815:-40951 Msa1420490:CDS
TTAACATGGTTTAATCATTG+AGG 0.522179 tig0024815:+49116 None:intergenic
TCATGGGTTTGTGGAGAGGA+CGG 0.522273 tig0024815:-43459 Msa1420490:five_prime_UTR
ATGAAGAGTGTTTGAAATGT+GGG 0.523905 tig0024815:-42492 Msa1420490:CDS
AACACTCTTCATATGTAGCA+TGG 0.525664 tig0024815:+42503 None:intergenic
GAAGCCACTGAGAACTAGTA+TGG 0.525821 tig0024815:-43300 Msa1420490:five_prime_UTR
GGAGGGGAAAGGAGGACCGA+TGG 0.526035 tig0024815:-47886 Msa1420490:five_prime_UTR
ATAATGATAGCTAGAGCTAC+TGG 0.526297 tig0024815:-45562 Msa1420490:five_prime_UTR
TTTAAAGACAATGGAAAGAG+AGG 0.526312 tig0024815:-45780 Msa1420490:five_prime_UTR
TTCAAATGCAAGAAAAGGAC+GGG 0.526629 tig0024815:-43030 Msa1420490:intron
GGAGATGTACATGGTGGTTG+TGG 0.527779 tig0024815:-47769 Msa1420490:five_prime_UTR
GATGGAGAGGACGGCGAATG+AGG 0.528403 tig0024815:-42599 Msa1420490:CDS
GAGCTATCTTGATGGATGTA+GGG 0.529146 tig0024815:-49012 Msa1420490:five_prime_UTR
CAAATTGTAACAAATCTAGT+TGG 0.529505 tig0024815:-44675 Msa1420490:five_prime_UTR
ATGGATTACATCTGCTGTCA+TGG 0.530208 tig0024815:+42522 None:intergenic
CTATTGATATGATGTCTTGA+GGG 0.530839 tig0024815:-45691 Msa1420490:intron
AATCTAGTCCAGAAAGAGAA+AGG 0.531970 tig0024815:-47207 Msa1420490:five_prime_UTR
CCAAATTTCTAGACAGCTCA+AGG 0.532517 tig0024815:+50024 None:intergenic
CAAACTGAAGTTGAACCATC+AGG 0.532569 tig0024815:+43215 None:intergenic
AACAGGCAAGAAGAGACAGC+CGG 0.534721 tig0024815:-43249 Msa1420490:five_prime_UTR
CATCTACAGCAAAATGGATG+TGG 0.534726 tig0024815:-46184 Msa1420490:five_prime_UTR
TCAAGCACAAACCTGGTCAA+TGG 0.535029 tig0024815:+46034 None:intergenic
AAACCCTTCTGCCATTGACC+AGG 0.535215 tig0024815:-46045 Msa1420490:intron
GTTTCCTGAGCAAATGTGAC+AGG 0.535330 tig0024815:+45731 None:intergenic
TCATTCAAGCACATAGAGCC+CGG 0.535674 tig0024815:-46260 Msa1420490:five_prime_UTR
AGTCTGAGCATAGCCACGTT+GGG 0.538627 tig0024815:+44814 None:intergenic
AACTCGTCGAATTCGGGAGA+TGG 0.539466 tig0024815:-42617 Msa1420490:CDS
TGTAATCTCAAAACGCTAAG+TGG 0.539973 tig0024815:-44352 Msa1420490:five_prime_UTR
TCTTGGAACTTTGAAGCCAA+AGG 0.542220 tig0024815:+46309 None:intergenic
GGTTGCGGTGGTGTTGGCGA+TGG 0.542582 tig0024815:-47790 Msa1420490:five_prime_UTR
TGTTGTGGGGCATGACGACT+TGG 0.542613 tig0024815:-40915 Msa1420490:three_prime_UTR
TAGCTATCATTATGTTCTCT+CGG 0.543918 tig0024815:+45572 None:intergenic
TGTTTGAAATGTGGGATGGA+TGG 0.544805 tig0024815:-42484 Msa1420490:CDS
CTGTTCCCAAAACTTGCTGA+AGG 0.546763 tig0024815:+43267 None:intergenic
CGAGGACATCACGGATTTAG+CGG 0.548208 tig0024815:+47362 None:intergenic
TTGTTGGGTTCTCATCATCT+CGG 0.549046 tig0024815:-41533 Msa1420490:CDS
TTGTTGGGTTCTCATCATCT+CGG 0.549046 tig0024815:-45511 Msa1420490:five_prime_UTR
CGAGCTTCAGATTGGAAGAG+CGG 0.549147 tig0024815:+50768 None:intergenic
AGAAAATAGAGGTTTATAGA+GGG 0.552867 tig0024815:+48514 None:intergenic
ATCAGGGCAATGGATGAAGT+TGG 0.554409 tig0024815:-47823 Msa1420490:five_prime_UTR
GGAAGCTATTCGAGAAGAAG+AGG 0.554823 tig0024815:-50163 Msa1420490:intron
GTTAACAACTCTTTGTGCAT+AGG 0.556014 tig0024815:+41858 None:intergenic
GAGAAAGATTCATGGGTTTG+TGG 0.557247 tig0024815:-43468 Msa1420490:five_prime_UTR
GAGCTCATTAAAGCGACCAC+AGG 0.557353 tig0024815:-45430 Msa1420490:five_prime_UTR
CTATGCACAAAGAGTTAACT+CGG 0.558471 tig0024815:-45837 Msa1420490:five_prime_UTR
AGGTACTTCCAATCTGTGGC+CGG 0.558714 tig0024815:+44017 None:intergenic
TGTTGGAGGATCCTTTGATG+TGG 0.558720 tig0024815:-45114 Msa1420490:five_prime_UTR
CAGAGAAGAGAGCTAAAGAT+CGG 0.559209 tig0024815:+50717 None:intergenic
AGATTCATGGGTTTGTGGAG+AGG 0.561266 tig0024815:-43463 Msa1420490:five_prime_UTR
TATGGCAACCAATACAAAGA+AGG 0.561778 tig0024815:-45010 Msa1420490:intron
CCAAGCATTCAATATCCGAT+TGG 0.562018 tig0024815:-48360 Msa1420490:five_prime_UTR
TAGGCCACTCCACTCGGTAG+CGG 0.563486 tig0024815:+41877 None:intergenic
TAGGCCACTCCACTCGGTAG+CGG 0.563486 tig0024815:+45857 None:intergenic
GATACCATTTGAAGAGACTT+GGG 0.564437 tig0024815:-43850 Msa1420490:five_prime_UTR
ATACGGGGACTGGCTTCTAC+GGG 0.565321 tig0024815:-40941 Msa1420490:CDS
ACTGATACTCAAACCAATGC+CGG 0.566091 tig0024815:+44084 None:intergenic
TATGAAGAGTGTTTGAAATG+TGG 0.566182 tig0024815:-42493 Msa1420490:CDS
CGGAGCTGAAGGTGGTGGAG+GGG 0.566193 tig0024815:-47902 Msa1420490:intron
TCTAGAAACTATGGTGGTAC+CGG 0.567665 tig0024815:-44103 Msa1420490:five_prime_UTR
AGTCTGAAAGGAGATTAAAC+GGG 0.569635 tig0024815:+50841 None:intergenic
ATGACGGATGGTGTTGAAGT+TGG 0.569733 tig0024815:-48288 Msa1420490:five_prime_UTR
TGTGCATAGGCCACTCCACT+CGG 0.569929 tig0024815:+41871 None:intergenic
TGTGCATAGGCCACTCCACT+CGG 0.569929 tig0024815:+45851 None:intergenic
ATGGTGGTGGCGAAAGGAGA+AGG 0.570011 tig0024815:-47855 Msa1420490:five_prime_UTR
ACGGATGGTGTTGAAGTTGG+CGG 0.570486 tig0024815:-48285 Msa1420490:five_prime_UTR
TACTAATATTCGTAGCAAGA+AGG 0.570683 tig0024815:+43375 None:intergenic
ACAGGCAAGAAGAGACAGCC+GGG 0.572058 tig0024815:-43248 Msa1420490:five_prime_UTR
CTTTGATGTGGAGTCCCTTG+TGG 0.572959 tig0024815:-45102 Msa1420490:five_prime_UTR
CACAAGGGACTCCACATCAA+AGG 0.573882 tig0024815:+45103 None:intergenic
CCGTGATGTCCTCGTCGCAA+TGG 0.574492 tig0024815:-47353 Msa1420490:five_prime_UTR
GGTGGCGATGGCGGTTGCGG+TGG 0.575133 tig0024815:-47802 Msa1420490:five_prime_UTR
AGGATTAGAGTTCGATGCGA+TGG 0.575134 tig0024815:-48318 Msa1420490:five_prime_UTR
TATAAAGACAATGGAAAGAG+AGG 0.575171 tig0024815:-41797 Msa1420490:CDS
TAGAGGGTTTAAAGCCGTTG+TGG 0.575392 tig0024815:-43906 Msa1420490:five_prime_UTR
ATGCGGAGTTTAGCACATAC+GGG 0.576002 tig0024815:-40957 Msa1420490:CDS
GCAGAAGGGTTTCTGTAGGA+TGG 0.576930 tig0024815:+46056 None:intergenic
GACTGCTCAAGCGTGTGGGA+AGG 0.578235 tig0024815:-44795 Msa1420490:five_prime_UTR
CTCAGACTGCTCAAGCGTGT+GGG 0.579543 tig0024815:-44799 Msa1420490:five_prime_UTR
CTAAGACTGTTCAGATTCAG+AGG 0.581573 tig0024815:-50115 Msa1420490:five_prime_UTR
TAGAGTGGTTATAAAGACAA+TGG 0.582498 tig0024815:-41806 Msa1420490:CDS
TATTGTTCTTATAGAAGGTG+AGG 0.583167 tig0024815:-48598 Msa1420490:five_prime_UTR
CAAACCTGGTCAATGGCAGA+AGG 0.584600 tig0024815:+46041 None:intergenic
AAGGTGGTGGAGGGGAAAGG+AGG 0.586200 tig0024815:-47894 Msa1420490:five_prime_UTR
CGAATGGTGAATGTAGTGAA+AGG 0.586436 tig0024815:-42573 Msa1420490:CDS
ATAACTGAAACTAAATCGAT+CGG 0.586558 tig0024815:+47312 None:intergenic
TTGGGTCTGCCGGAACGTGT+CGG 0.588603 tig0024815:+40865 None:intergenic
CGGCTAGGACCGCTTTCGAA+AGG 0.588844 tig0024815:-41900 Msa1420490:CDS
CGGTAGCGGCCTTTCGAAAG+CGG 0.589335 tig0024815:+41891 None:intergenic
CGGTAGCGGCCTTTCGAAAG+CGG 0.589335 tig0024815:+45871 None:intergenic
TGGGTCTGTGTCGAAGACAC+TGG 0.590108 tig0024815:-44193 Msa1420490:five_prime_UTR
CCACTGAGAACTAGTATGGT+GGG 0.590558 tig0024815:-43296 Msa1420490:five_prime_UTR
CAATGGAGAAAGAGTCTGAA+AGG 0.590894 tig0024815:+50829 None:intergenic
GCTCAGACTGCTCAAGCGTG+TGG 0.592158 tig0024815:-44800 Msa1420490:five_prime_UTR
AGCAAGCATCAAACTTGTGA+GGG 0.592861 tig0024815:+43062 None:intergenic
AATCGATCGGAGAGTTCTAC+CGG 0.594959 tig0024815:+47325 None:intergenic
GTTTGAGAAGCAGCATAGAG+TGG 0.595646 tig0024815:-45804 Msa1420490:five_prime_UTR
ATGCGATGGCGAAAGGATGA+CGG 0.597203 tig0024815:-48304 Msa1420490:five_prime_UTR
ATTCAAATGCAAGAAAAGGA+CGG 0.597672 tig0024815:-43031 Msa1420490:CDS
GAACACAGTTGAAACCAGAT+TGG 0.599444 tig0024815:+47161 None:intergenic
ACACTATGGCATGATAGAGT+TGG 0.601658 tig0024815:-48728 Msa1420490:five_prime_UTR
GCTGTCTAGAAATTTGGATG+TGG 0.601699 tig0024815:-50018 Msa1420490:five_prime_UTR
GTCGAATTCGGGAGATGGAG+AGG 0.601823 tig0024815:-42612 Msa1420490:CDS
CTTGAGACTTATCGAAATGG+AGG 0.602255 tig0024815:-44406 Msa1420490:five_prime_UTR
GTTTGAGAAGCAGCATAGAG+TGG 0.605018 tig0024815:-41821 Msa1420490:CDS
ATCTTGATGGATGTAGGGAA+AGG 0.606230 tig0024815:-49007 Msa1420490:five_prime_UTR
CTCTATCATGCCATAGTGTG+TGG 0.606806 tig0024815:+48732 None:intergenic
GCCACTGAGAACTAGTATGG+TGG 0.607785 tig0024815:-43297 Msa1420490:five_prime_UTR
GATTTAGCGGAGGCTTTGTG+CGG 0.608415 tig0024815:+47375 None:intergenic
ATTTGACCAGATTCGACAAG+TGG 0.608851 tig0024815:-50139 Msa1420490:five_prime_UTR
TTAAACCCTCTAAAACTGGA+TGG 0.609462 tig0024815:+43917 None:intergenic
TGTAAATATTCCAAAATCCG+CGG 0.609721 tig0024815:+43985 None:intergenic
CCGGGAAAAGAGATGCCTGA+TGG 0.609734 tig0024815:-43230 Msa1420490:five_prime_UTR
ACCACCATCTACAACTCCAT+CGG 0.611181 tig0024815:+47870 None:intergenic
AGGGCAATGGATGAAGTTGG+TGG 0.612947 tig0024815:-47820 Msa1420490:five_prime_UTR
AAGCAAGCATCAAACTTGTG+AGG 0.613257 tig0024815:+43061 None:intergenic
CAGTCTGAGCATAGCCACGT+TGG 0.613747 tig0024815:+44813 None:intergenic
TTTATAGAGGGAATCACGCG+TGG 0.614222 tig0024815:+48526 None:intergenic
TAGAGTTGGTGTGTGAATGT+AGG 0.614643 tig0024815:-48714 Msa1420490:five_prime_UTR
ATATAGACTGATACACGGAT+AGG 0.615163 tig0024815:+49962 None:intergenic
GATGGAGTTGTAGATGGTGG+TGG 0.615734 tig0024815:-47868 Msa1420490:five_prime_UTR
GTAGCAAGAAGGATCATTCG+AGG 0.616557 tig0024815:+43386 None:intergenic
TGATGTCCTCGTCGCAATGG+CGG 0.616829 tig0024815:-47350 Msa1420490:five_prime_UTR
CACTGTATCACTAAAACATG+CGG 0.616849 tig0024815:+43328 None:intergenic
CTTCTACGGGTAATGTTGTG+GGG 0.617417 tig0024815:-40928 Msa1420490:exon
ACATACTGAGAGCTCCTACT+GGG 0.618378 tig0024815:-41583 Msa1420490:CDS
TCTATTGATATGATGTCTTG+AGG 0.618511 tig0024815:-45692 Msa1420490:five_prime_UTR
CATGGTTTGATCAGTCTGCA+AGG 0.618845 tig0024815:+49078 None:intergenic
AGCTCATTAAAGCGACCACA+GGG 0.619676 tig0024815:-45429 Msa1420490:intron
ATGTCAATGGAAGTGACTGC+AGG 0.620608 tig0024815:-43157 Msa1420490:CDS
TTCGAAAGGCCGCTACCGAG+TGG 0.621158 tig0024815:-41886 Msa1420490:CDS
TTCGAAAGGCCGCTACCGAG+TGG 0.621158 tig0024815:-45866 Msa1420490:five_prime_UTR
ATTTCCAATGATCGGCATTG+GGG 0.621764 tig0024815:+40486 None:intergenic
GATGGTGTTGAAGTTGGCGG+TGG 0.623232 tig0024815:-48282 Msa1420490:five_prime_UTR
TGGTTGCCATACATGATTAG+GGG 0.623830 tig0024815:+45022 None:intergenic
AGAGTGTTTGAAATGTGGGA+TGG 0.624246 tig0024815:-42488 Msa1420490:CDS
TGCACAAAGAGTTGTTAACT+CGG 0.624623 tig0024815:-41854 Msa1420490:CDS
ATGTGGATACTAAAGTGAGA+AGG 0.624715 tig0024815:-46167 Msa1420490:five_prime_UTR
GAAGCTATTCGAGAAGAAGA+GGG 0.626506 tig0024815:-50162 Msa1420490:intron
AATGGCAGAAGGGTTTCTGT+AGG 0.630365 tig0024815:+46052 None:intergenic
ACTCTTCATCAGCAATTAGG+TGG 0.632287 tig0024815:+44279 None:intergenic
AATATCCGATTGGAAAACCC+AGG 0.633825 tig0024815:-48350 Msa1420490:five_prime_UTR
ATGGCAATTGAAGCTCGTTG+AGG 0.635193 tig0024815:-50742 Msa1420490:five_prime_UTR
GGTTAGGGATGAGTATGCAC+CGG 0.635635 tig0024815:-41767 Msa1420490:intron
GATGAAGTTGGTGGCGATGG+CGG 0.635723 tig0024815:-47811 Msa1420490:five_prime_UTR
AAACCTGGTCAATGGCAGAA+GGG 0.635904 tig0024815:+46042 None:intergenic
CGGCTAGGACCGCTTTCGAA+AGG 0.636060 tig0024815:-45880 Msa1420490:five_prime_UTR
TAATGTAAAAGGTAAGGTGA+CGG 0.636801 tig0024815:-47420 Msa1420490:five_prime_UTR
AAGGCCGCTACCGAGTGGAG+TGG 0.637244 tig0024815:-41881 Msa1420490:CDS
AAGGCCGCTACCGAGTGGAG+TGG 0.637244 tig0024815:-45861 Msa1420490:five_prime_UTR
CAAAATGATGAAGAATAGCA+AGG 0.637826 tig0024815:+40621 None:intergenic
AATTCGGGAGATGGAGAGGA+CGG 0.638289 tig0024815:-42608 Msa1420490:CDS
GCTTGGATATCTATTAGGCA+TGG 0.639413 tig0024815:+48377 None:intergenic
GGAACTTTGAAGCCAAAGGG+TGG 0.640019 tig0024815:+46313 None:intergenic
GAGTTAACTCGGAAAGAAAG+CGG 0.640585 tig0024815:-45826 Msa1420490:five_prime_UTR
TTGTTAACTCGGAAAGAGAG+CGG 0.640754 tig0024815:-41843 Msa1420490:CDS
AACAACCTAAAAGGGCTAGT+CGG 0.642277 tig0024815:+41551 None:intergenic
GGGTTCTCATCATCTCGGTG+TGG 0.642737 tig0024815:-41528 Msa1420490:CDS
GGGTTCTCATCATCTCGGTG+TGG 0.642737 tig0024815:-45506 Msa1420490:five_prime_UTR
AAAATGGTGCTTCCAGCACA+GGG 0.643044 tig0024815:-43775 Msa1420490:intron
GACCGCCCATTAGTTCAGCT+AGG 0.643366 tig0024815:+44056 None:intergenic
GTAACTTTGAAGCCAAAGGG+TGG 0.650789 tig0024815:+41944 None:intergenic
GAAGTTGTGCATACATCTGG+CGG 0.651844 tig0024815:-44376 Msa1420490:five_prime_UTR
AGTCAATAACACAATTAACA+TGG 0.652172 tig0024815:+49060 None:intergenic
CCATTGCGACGAGGACATCA+CGG 0.652805 tig0024815:+47353 None:intergenic
TGCGGCAACTGGAAACAGAA+CGG 0.653414 tig0024815:-43425 Msa1420490:five_prime_UTR
ACGGCGAATGAGGAGACGAA+TGG 0.653590 tig0024815:-42589 Msa1420490:CDS
GCGAGATATTAGAAAAGCTG+AGG 0.654014 tig0024815:-47747 Msa1420490:five_prime_UTR
ATAATGCAGTTCAATAAGCG+AGG 0.657195 tig0024815:-44487 Msa1420490:intron
ACATCATATCAATAGACTCA+AGG 0.658508 tig0024815:+45699 None:intergenic
GTCGGAACAAACTTCCCAGT+AGG 0.660421 tig0024815:+41569 None:intergenic
TACAAAGAATCCAATAACTG+AGG 0.662560 tig0024815:-43966 Msa1420490:five_prime_UTR
AGGACGGGATCTTCAGTGTG+CGG 0.664290 tig0024815:-43443 Msa1420490:five_prime_UTR
GAAAAGGTACTTCCAATCTG+TGG 0.664912 tig0024815:+44013 None:intergenic
CCGGAACCGCCATTGCGACG+AGG 0.668033 tig0024815:+47344 None:intergenic
GTTGGCGATGGAGATGTACA+TGG 0.668187 tig0024815:-47778 Msa1420490:five_prime_UTR
GATGTGAAGTGTGCAGACAG+CGG 0.669637 tig0024815:-43112 Msa1420490:CDS
ACAGAACCCAATGAGTAAGA+GGG 0.670609 tig0024815:+47085 None:intergenic
TCAGTTTGAAGCCTTCTGTG+CGG 0.678971 tig0024815:-43200 Msa1420490:five_prime_UTR
TCGACTTCTAGAAACTATGG+TGG 0.680954 tig0024815:-44109 Msa1420490:five_prime_UTR
GGACATCACGGATTTAGCGG+AGG 0.683899 tig0024815:+47365 None:intergenic
CAAAGTTCCAAGAACAAACG+GGG 0.685277 tig0024815:-46299 Msa1420490:five_prime_UTR
TTATAGAGGGAATCACGCGT+GGG 0.688730 tig0024815:+48527 None:intergenic
ACCGATGGAGTTGTAGATGG+TGG 0.690749 tig0024815:-47871 Msa1420490:five_prime_UTR
GGATGGCTAGAGCATGAACA+TGG 0.693348 tig0024815:+46073 None:intergenic
TGTCAGGGAAACATTGCTGA+AGG 0.696155 tig0024815:-41011 Msa1420490:intron
TGCCTAGCTGAACTAATGGG+CGG 0.697388 tig0024815:-44058 Msa1420490:five_prime_UTR
AGGTTTCCCATCAACCACAA+CGG 0.697501 tig0024815:+43892 None:intergenic
ACAAATGCAATCATTCAACA+AGG 0.705448 tig0024815:+48955 None:intergenic
AAACCATATAGACTGATACA+CGG 0.717551 tig0024815:+49957 None:intergenic
TGCGGAGTTTAGCACATACG+GGG 0.722432 tig0024815:-40956 Msa1420490:CDS
CCCACCATACTAGTTCTCAG+TGG 0.729319 tig0024815:+43296 None:intergenic
GAATTGAACTCAACCCAACG+TGG 0.736332 tig0024815:-44827 Msa1420490:five_prime_UTR
GATGGCGAAAGGATGACGGA+TGG 0.756508 tig0024815:-48300 Msa1420490:five_prime_UTR
GGCGATGGAGATGTACATGG+TGG 0.786952 tig0024815:-47775 Msa1420490:five_prime_UTR

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TTATTAATTTTTTTTTTTTT+TGG - tig0024815:48319-48338 Msa1420490:five_prime_UTR 0.0%
!!! TGATTAATTAACTTTTTAAT+TGG - tig0024815:46162-46181 Msa1420490:five_prime_UTR 10.0%
!! ATTAAATGAGTTAAAATATT+TGG - tig0024815:47780-47799 Msa1420490:five_prime_UTR 10.0%
!! GTCAAAATAAATAAATTTAT+CGG - tig0024815:50479-50498 Msa1420490:intron 10.0%
!! TCAAAATAAATAAATTTATC+GGG - tig0024815:50480-50499 Msa1420490:intron 10.0%
!!! ACACAAAGTTTTTTATATAT+AGG + tig0024815:44843-44862 None:intergenic 15.0%
!!! TTAATTAACTTTTTAATTGG+AGG - tig0024815:46165-46184 Msa1420490:five_prime_UTR 15.0%
!!! TTTTTAGTGAATTAAAGTTA+AGG - tig0024815:47597-47616 Msa1420490:intron 15.0%
!!! ATAAAAGTATCTGAAATTTT+AGG - tig0024815:49150-49169 Msa1420490:intron 15.0%
!! ATCACTATCATTTATTAAAA+TGG + tig0024815:50224-50243 None:intergenic 15.0%
!! AAAAACTTCAGTTATTTATT+TGG + tig0024815:50638-50657 None:intergenic 15.0%
!! AATTGAATATAGAATCCTTA+GGG + tig0024815:40764-40783 None:intergenic 20.0%
!! ACTTATTTGAACTTATTTAG+TGG - tig0024815:40929-40948 Msa1420490:exon 20.0%
!!! AAGTTTTTACACAATTAACA+TGG + tig0024815:41551-41570 None:intergenic 20.0%
!! AAAAATTCAGAGAATTTCAA+TGG + tig0024815:42050-42069 None:intergenic 20.0%
!! ATAAAAGGAAATTGAGTTTA+TGG + tig0024815:42092-42111 None:intergenic 20.0%
!!! AAGTTTTAACACAATTAACA+TGG + tig0024815:42209-42228 None:intergenic 20.0%
!!! CAAAAGTACAAACTTAATAA+TGG + tig0024815:42410-42429 None:intergenic 20.0%
!!! CATTATTAAGTTTGTACTTT+TGG - tig0024815:42408-42427 Msa1420490:intron 20.0%
!! AAGAATATTGTTCTTATAGA+AGG - tig0024815:42705-42724 Msa1420490:intron 20.0%
!! GCTACAAATTCAATTAATAA+AGG + tig0024815:42759-42778 None:intergenic 20.0%
!! TAAGAATATCTAGAAAATAG+AGG + tig0024815:42808-42827 None:intergenic 20.0%
!! TCATTAAAATGCACAAATAT+TGG - tig0024815:44392-44411 Msa1420490:five_prime_UTR 20.0%
!! CAATAAAAAAAGGAAAGAAA+GGG + tig0024815:44523-44542 None:intergenic 20.0%
!! ACAATAAAAAAAGGAAAGAA+AGG + tig0024815:44524-44543 None:intergenic 20.0%
!! GAAAATTCGACAATAAAAAA+AGG + tig0024815:44533-44552 None:intergenic 20.0%
!!! TTTCTGTGTAATTTTTGAAA+TGG - tig0024815:44549-44568 Msa1420490:intron 20.0%
!!! CTGTTAATTGAGTATTTTTT+GGG - tig0024815:44864-44883 Msa1420490:intron 20.0%
!! TCTGATTAAGATTAATGTTA+TGG - tig0024815:46600-46619 Msa1420490:intron 20.0%
!! CTGATTAAGATTAATGTTAT+GGG - tig0024815:46601-46620 Msa1420490:intron 20.0%
!! TTAGTAATGCAAATAACTTA+GGG + tig0024815:46699-46718 None:intergenic 20.0%
!! ATTAGTAATGCAAATAACTT+AGG + tig0024815:46700-46719 None:intergenic 20.0%
!! CAATGTCATTAATTACAAAA+AGG + tig0024815:47574-47593 None:intergenic 20.0%
!! TCTCAACAAAAATAATATCA+GGG + tig0024815:47824-47843 None:intergenic 20.0%
!! TTCTCAACAAAAATAATATC+AGG + tig0024815:47825-47844 None:intergenic 20.0%
!!! TTTCTGTGTAATTTTTGAAA+TGG - tig0024815:44549-44568 Msa1420490:intron 20.0%
!!! ACTGTTAATTGAGTATTTTT+TGG - tig0024815:49229-49248 Msa1420490:intron 20.0%
!!! CTGTTAATTGAGTATTTTTT+GGG - tig0024815:44864-44883 Msa1420490:intron 20.0%
!! TGTGTTTAGTATAAAAATCT+TGG - tig0024815:49965-49984 Msa1420490:five_prime_UTR 20.0%
!! GTGTTTAGTATAAAAATCTT+GGG - tig0024815:49966-49985 Msa1420490:five_prime_UTR 20.0%
!!! AACTGAAGTTTTTTAAGTAA+CGG - tig0024815:50645-50664 Msa1420490:five_prime_UTR 20.0%
!!! AAATTTTGATTTCCAATGAT+CGG + tig0024815:50833-50852 None:intergenic 20.0%
!! TGGAAATCAAAATTTATTGA+TGG - tig0024815:50838-50857 Msa1420490:five_prime_UTR 20.0%
! CAATTGAATATAGAATCCTT+AGG + tig0024815:40765-40784 None:intergenic 25.0%
! CATGATACAAAAACAGAATT+TGG + tig0024815:40820-40839 None:intergenic 25.0%
! ATCAAATCTAATGTCCTTAT+TGG - tig0024815:41107-41126 Msa1420490:intron 25.0%
! TTAACATGGTTTAATCATTG+AGG + tig0024815:41537-41556 None:intergenic 25.0%
! TATTTAGCAATTGATCTGTA+TGG + tig0024815:41593-41612 None:intergenic 25.0%
! TACAGATCAATTGCTAAATA+TGG - tig0024815:41593-41612 Msa1420490:CDS 25.0%
!! ATACTTCTAAAGAAAACACT+TGG + tig0024815:41636-41655 None:intergenic 25.0%
! AAAAACTACCAAAGGAAATA+AGG + tig0024815:41699-41718 None:intergenic 25.0%
!!! TATTTCCTTTGGTAGTTTTT+TGG - tig0024815:41699-41718 Msa1420490:intron 25.0%
! TTAAACCAAAAAACTACCAA+AGG + tig0024815:41707-41726 None:intergenic 25.0%
! AAATTTGTACTACTTTGCTA+TGG - tig0024815:41899-41918 Msa1420490:CDS 25.0%
! ATTATCACTAAGTGAATCAT+TGG + tig0024815:41926-41945 None:intergenic 25.0%
! TCAATTTCCTGATTTAATTG+AGG + tig0024815:42021-42040 None:intergenic 25.0%
! ATGTTGAAATGCTAGATAAA+AGG + tig0024815:42107-42126 None:intergenic 25.0%
! TTAACATGGTTTAATCATTG+AGG + tig0024815:41537-41556 None:intergenic 25.0%
! AGTCAATAACACAATTAACA+TGG + tig0024815:42251-42270 None:intergenic 25.0%
!!! TGTGTTATTGACTATGTTTT+TGG - tig0024815:42258-42277 Msa1420490:intron 25.0%
! AGCAAACGACAAAAATTTAA+TGG - tig0024815:42552-42571 Msa1420490:CDS 25.0%
!!! TAGTTGTTTTTGTGAATCAA+AGG - tig0024815:42644-42663 Msa1420490:intron 25.0%
! AGAAAATAGAGGTTTATAGA+GGG + tig0024815:42797-42816 None:intergenic 25.0%
! TAGAAAATAGAGGTTTATAG+AGG + tig0024815:42798-42817 None:intergenic 25.0%
! TGAAAATACAATTAGTGTGA+TGG + tig0024815:43741-43760 None:intergenic 25.0%
! ATAACTGAAACTAAATCGAT+CGG + tig0024815:43999-44018 None:intergenic 25.0%
! GTAACAAAGCACATATAAAA+AGG - tig0024815:44063-44082 Msa1420490:five_prime_UTR 25.0%
!!! GTGTTTTTTAAGTCAATGTT+TGG - tig0024815:44260-44279 Msa1420490:five_prime_UTR 25.0%
! AGAGAGAGAATTAAAAAGAA+GGG + tig0024815:44498-44517 None:intergenic 25.0%
! AAGAGAGAGAATTAAAAAGA+AGG + tig0024815:44499-44518 None:intergenic 25.0%
!!! GATACTTTACTTTTATCTGA+TGG + tig0024815:44775-44794 None:intergenic 25.0%
!!! AGTAAAGTATCTGAGATTTT+AGG - tig0024815:44784-44803 Msa1420490:five_prime_UTR 25.0%
!!! GCTGTTAATTGAGTATTTTT+TGG - tig0024815:44863-44882 Msa1420490:intron 25.0%
! TATGTTTCATGAGTAATTAG+AGG - tig0024815:45954-45973 Msa1420490:intron 25.0%
! GTGTTTGGTATAAAAATCTT+AGG - tig0024815:45986-46005 Msa1420490:intron 25.0%
! CAAATTGTAACAAATCTAGT+TGG - tig0024815:46633-46652 Msa1420490:intron 25.0%
! TACTAATATGCATGTTATGT+TGG - tig0024815:46713-46732 Msa1420490:intron 25.0%
! TTGTTCATAAAAATCATTCG+AGG + tig0024815:47085-47104 None:intergenic 25.0%
! GTCAAATAAACTTTATAAGC+CGG - tig0024815:47272-47291 Msa1420490:five_prime_UTR 25.0%
! TGAGTTAAAATATTTGGTTG+TGG - tig0024815:47786-47805 Msa1420490:five_prime_UTR 25.0%
!! TTTTTGTTGAGAAAGATTCA+TGG - tig0024815:47832-47851 Msa1420490:five_prime_UTR 25.0%
!! TTTTGTTGAGAAAGATTCAT+GGG - tig0024815:47833-47852 Msa1420490:five_prime_UTR 25.0%
!!! AGTTTTTTCTAAATCAGCAA+AGG + tig0024815:48371-48390 None:intergenic 25.0%
! TATCATTGAATTTATCAGCA+AGG + tig0024815:48427-48446 None:intergenic 25.0%
! ACAAACATAACATGTATAGA+GGG + tig0024815:48593-48612 None:intergenic 25.0%
! AACAAACATAACATGTATAG+AGG + tig0024815:48594-48613 None:intergenic 25.0%
!! CATGTACTTACATTATTTTC+AGG - tig0024815:48660-48679 Msa1420490:five_prime_UTR 25.0%
! TAAATTCCGTTTACCTATAT+TGG - tig0024815:48763-48782 Msa1420490:five_prime_UTR 25.0%
!!! TTGTTTTGTATGAGCATATA+TGG - tig0024815:48903-48922 Msa1420490:five_prime_UTR 25.0%
!! TGTATTAGTTAGTATTGAAC+TGG - tig0024815:48935-48954 Msa1420490:five_prime_UTR 25.0%
! AATAAAGAGAAAAGTGACAA+AGG + tig0024815:48988-49007 None:intergenic 25.0%
!!! GCACGAACTTTTTTATATAT+AGG + tig0024815:49209-49228 None:intergenic 25.0%
! TGTTTCATATGAGTAATTAG+AGG - tig0024815:49934-49953 Msa1420490:five_prime_UTR 25.0%
!!! TGATGTTTCTTTTTTATGTC+TGG - tig0024815:50118-50137 Msa1420490:five_prime_UTR 25.0%
!! CTGAATGTTGACATTTTTAT+TGG - tig0024815:50274-50293 Msa1420490:intron 25.0%
!!! GTACTTAATTTTTCAGCTAT+AGG + tig0024815:50727-50746 None:intergenic 25.0%
!! CATCTAAAATGAGTTAAAGA+TGG + tig0024815:50760-50779 None:intergenic 25.0%
!! CATCTTTAACTCATTTTAGA+TGG - tig0024815:50758-50777 Msa1420490:five_prime_UTR 25.0%
TGAAATTTGCGAAGTGAAAA+CGG + tig0024815:40625-40644 None:intergenic 30.0%
TTTCACTTCGCAAATTTCAT+TGG - tig0024815:40626-40645 Msa1420490:three_prime_UTR 30.0%
!! TATCTGATATTTGCTATCTC+AGG - tig0024815:40883-40902 Msa1420490:three_prime_UTR 30.0%
TAAACTGAAACAATCCAAAC+AGG + tig0024815:40910-40929 None:intergenic 30.0%
!! TAGTGGAATAAGTTTTGTAG+TGG - tig0024815:40946-40965 Msa1420490:CDS 30.0%
! TGACTTATTTGACTTATCTC+AGG - tig0024815:40975-40994 Msa1420490:CDS 30.0%
! GACTTATTTGACTTATCTCA+GGG - tig0024815:40976-40995 Msa1420490:CDS 30.0%
AACACCAATCAAAACAAAAC+AGG + tig0024815:41002-41021 None:intergenic 30.0%
!! AATGTCCTTATTGGTTGTTT+TGG - tig0024815:41116-41135 Msa1420490:intron 30.0%
TTCATCCAAAACAACCAATA+AGG + tig0024815:41124-41143 None:intergenic 30.0%
!!! TATTGGTTGTTTTGGATGAA+TGG - tig0024815:41124-41143 Msa1420490:intron 30.0%
AAACCATATAGACTGATACA+CGG + tig0024815:41354-41373 None:intergenic 30.0%
! TATCAGTCTATATGGTTTGT+AGG - tig0024815:41356-41375 Msa1420490:intron 30.0%
TTTCAACATTTAGCATGTAC+TGG - tig0024815:41460-41479 Msa1420490:intron 30.0%
! ATACCATACCTTATTTCCTT+TGG - tig0024815:41688-41707 Msa1420490:intron 30.0%
TGCAACTTTATCAGCTTAAA+AGG + tig0024815:41783-41802 None:intergenic 30.0%
! TTTTAAGCTGATAAAGTTGC+AGG - tig0024815:41782-41801 Msa1420490:CDS 30.0%
TGATTTAATTGAGGCAATGT+TGG + tig0024815:42012-42031 None:intergenic 30.0%
AACATTGCCTCAATTAAATC+AGG - tig0024815:42011-42030 Msa1420490:intron 30.0%
TTTCAACATTTAGCATGTAC+TGG - tig0024815:41460-41479 Msa1420490:intron 30.0%
ACAAATGCAATCATTCAACA+AGG + tig0024815:42356-42375 None:intergenic 30.0%
TATTGTTCTTATAGAAGGTG+AGG - tig0024815:42710-42729 Msa1420490:intron 30.0%
!! AACTTGTTGATGCTTCAATA+TGG + tig0024815:42879-42898 None:intergenic 30.0%
TGAATGCTTGGATATCTATT+AGG + tig0024815:42939-42958 None:intergenic 30.0%
GAGAAAGTCCAAAAGAATTA+GGG - tig0024815:43295-43314 Msa1420490:five_prime_UTR 30.0%
TCTATTATGCATTTGACACA+CGG - tig0024815:43632-43651 Msa1420490:intron 30.0%
TCGTTTGTCAGAAAAAAATG+TGG - tig0024815:43763-43782 Msa1420490:intron 30.0%
CAGAAGTAATGTAAAAGGTA+AGG - tig0024815:43882-43901 Msa1420490:five_prime_UTR 30.0%
TAATGTAAAAGGTAAGGTGA+CGG - tig0024815:43888-43907 Msa1420490:five_prime_UTR 30.0%
GAAACAATGTTTACCTGTAT+AGG + tig0024815:44195-44214 None:intergenic 30.0%
! TTTTGTCTTTAAGCAAAGAC+TGG - tig0024815:44326-44345 Msa1420490:five_prime_UTR 30.0%
TATGAAGAGTTCAGAGAAAT+AGG - tig0024815:44898-44917 Msa1420490:intron 30.0%
TTCAAAGTTCCAAGAACAAA+CGG - tig0024815:45007-45026 Msa1420490:intron 30.0%
TTATTGCATCTACAGCAAAA+TGG - tig0024815:45118-45137 Msa1420490:five_prime_UTR 30.0%
!!! ATGTTTTGATCATTCTGTGT+TGG - tig0024815:45297-45316 Msa1420490:intron 30.0%
CATACATAAAGTTTCCTGAA+GGG + tig0024815:45383-45402 None:intergenic 30.0%
!!! TAGAGTGGTTTTAAAGACAA+TGG - tig0024815:45519-45538 Msa1420490:five_prime_UTR 30.0%
TTTAAAGACAATGGAAAGAG+AGG - tig0024815:45528-45547 Msa1420490:five_prime_UTR 30.0%
ACATCATATCAATAGACTCA+AGG + tig0024815:45612-45631 None:intergenic 30.0%
TCTATTGATATGATGTCTTG+AGG - tig0024815:45616-45635 Msa1420490:intron 30.0%
CTATTGATATGATGTCTTGA+GGG - tig0024815:45617-45636 Msa1420490:intron 30.0%
ATTAAAAACAAGCAGTGGAA+TGG + tig0024815:45663-45682 None:intergenic 30.0%
!! ATTTCTCATTTTTGCAATGC+AGG - tig0024815:45709-45728 Msa1420490:five_prime_UTR 30.0%
TAGCTATCATTATGTTCTCT+CGG + tig0024815:45739-45758 None:intergenic 30.0%
TAATGAGCTCTTATGTTGTT+GGG + tig0024815:45868-45887 None:intergenic 30.0%
TTAATGAGCTCTTATGTTGT+TGG + tig0024815:45869-45888 None:intergenic 30.0%
TGTGTCAATAACACTAATAG+TGG + tig0024815:46055-46074 None:intergenic 30.0%
!! AGTAAACTGTTTCTGTTACA+AGG - tig0024815:46094-46113 Msa1420490:five_prime_UTR 30.0%
TTAATTGGAGGTAGTTATGT+TGG - tig0024815:46177-46196 Msa1420490:five_prime_UTR 30.0%
! ACCAAGTAAATTTTCCACAA+GGG + tig0024815:46223-46242 None:intergenic 30.0%
AAACATCACCTTCTTTGTAT+TGG + tig0024815:46309-46328 None:intergenic 30.0%
CCAAAAACAAGTTACATTCA+TGG + tig0024815:46339-46358 None:intergenic 30.0%
!!! CCATGAATGTAACTTGTTTT+TGG - tig0024815:46336-46355 Msa1420490:five_prime_UTR 30.0%
AAAACTCTTCATCAGCAATT+AGG + tig0024815:47035-47054 None:intergenic 30.0%
AGGCATGAAAATTCTATCTT+GGG + tig0024815:47161-47180 None:intergenic 30.0%
AAGGCATGAAAATTCTATCT+TGG + tig0024815:47162-47181 None:intergenic 30.0%
! AATTTTCATGCCTTTTGTGA+AGG - tig0024815:47168-47187 Msa1420490:five_prime_UTR 30.0%
TGTAAATATTCCAAAATCCG+CGG + tig0024815:47326-47345 None:intergenic 30.0%
TACAAAGAATCCAATAACTG+AGG - tig0024815:47342-47361 Msa1420490:five_prime_UTR 30.0%
TTAAAATATTTGGTTGTGGC+AGG - tig0024815:47790-47809 Msa1420490:five_prime_UTR 30.0%
CAACAAAAATAATATCAGGG+TGG + tig0024815:47821-47840 None:intergenic 30.0%
TACTAATATTCGTAGCAAGA+AGG + tig0024815:47936-47955 None:intergenic 30.0%
!! ATTTTAGTGGTTGATGTCAA+TGG - tig0024815:48138-48157 Msa1420490:intron 30.0%
GGATATTCAAATGCAAGAAA+AGG - tig0024815:48273-48292 Msa1420490:five_prime_UTR 30.0%
ATTCAAATGCAAGAAAAGGA+CGG - tig0024815:48277-48296 Msa1420490:five_prime_UTR 30.0%
!! TATGAAGAGTGTTTGAAATG+TGG - tig0024815:48815-48834 Msa1420490:five_prime_UTR 30.0%
!! ATGAAGAGTGTTTGAAATGT+GGG - tig0024815:48816-48835 Msa1420490:five_prime_UTR 30.0%
! TTATGTCTCAAAACCTTTTG+AGG - tig0024815:48847-48866 Msa1420490:five_prime_UTR 30.0%
! ATTAGTTAGTATTGAACTGG+TGG - tig0024815:48938-48957 Msa1420490:five_prime_UTR 30.0%
!!! TAGTCTAAGATGTTTTGGTT+TGG - tig0024815:49049-49068 Msa1420490:five_prime_UTR 30.0%
! TTTCAGATACTTTTATCTGC+TGG + tig0024815:49146-49165 None:intergenic 30.0%
TGAACTCTTCTTCATATCTA+TGG + tig0024815:49260-49279 None:intergenic 30.0%
GAAAGAGATTTAGTGTTAGT+TGG - tig0024815:49296-49315 Msa1420490:intron 30.0%
! AGAAACTTTTGCAGAATATG+CGG - tig0024815:49388-49407 Msa1420490:intron 30.0%
TAGAGTGGTTATAAAGACAA+TGG - tig0024815:49502-49521 Msa1420490:intron 30.0%
TATAAAGACAATGGAAAGAG+AGG - tig0024815:49511-49530 Msa1420490:intron 30.0%
AATAAAAACAAGCAGAGGAA+TGG + tig0024815:49645-49664 None:intergenic 30.0%
!! ATTTCTCATTTTTGCAATGC+AGG - tig0024815:45709-45728 Msa1420490:five_prime_UTR 30.0%
AGCTGAAACATAGTGAAATA+AGG + tig0024815:49888-49907 None:intergenic 30.0%
TATGAGTAATTAGAGGATGA+AGG - tig0024815:49941-49960 Msa1420490:five_prime_UTR 30.0%
!! TTGACATTTTTATTGGTGTC+AGG - tig0024815:50281-50300 Msa1420490:intron 30.0%
!!! TGACATTTTTATTGGTGTCA+GGG - tig0024815:50282-50301 Msa1420490:intron 30.0%
!! ACTTTTAACCGACTTTTTGA+TGG - tig0024815:50323-50342 Msa1420490:intron 30.0%
!!! TTATTTTGACTCCAACTTTC+AGG + tig0024815:50469-50488 None:intergenic 30.0%
! AATAAATTTATCGGGCCTTT+TGG - tig0024815:50488-50507 Msa1420490:intron 30.0%
!!! AGACTCGTTATTTTTCAACT+TGG - tig0024815:50590-50609 Msa1420490:intron 30.0%
!!! GACTCGTTATTTTTCAACTT+GGG - tig0024815:50591-50610 Msa1420490:intron 30.0%
CAAAATGATGAAGAATAGCA+AGG + tig0024815:50690-50709 None:intergenic 30.0%
! GCTATTCTTCATCATTTTGT+AGG - tig0024815:50691-50710 Msa1420490:five_prime_UTR 30.0%
AGTCTGAAAGGAGATTAAAC+GGG + tig0024815:40470-40489 None:intergenic 35.0%
GAGTCTGAAAGGAGATTAAA+CGG + tig0024815:40471-40490 None:intergenic 35.0%
TTGTGTCTGAAAAATCGCAA+TGG + tig0024815:40499-40518 None:intergenic 35.0%
GAGAAAAAAGGAGCTTCAAT+CGG + tig0024815:40657-40676 None:intergenic 35.0%
TTGCAGAGAAGAGAGAAAAA+AGG + tig0024815:40669-40688 None:intergenic 35.0%
TGCTTCGAAAACTCTTGATT+AGG - tig0024815:40723-40742 Msa1420490:three_prime_UTR 35.0%
GCTTCGAAAACTCTTGATTA+GGG - tig0024815:40724-40743 Msa1420490:three_prime_UTR 35.0%
GTTTATACTCTCAAACCCTA+AGG - tig0024815:40746-40765 Msa1420490:three_prime_UTR 35.0%
TTTGTGCTCACTGCTAAAAT+GGG + tig0024815:41051-41070 None:intergenic 35.0%
! TTTTGTGCTCACTGCTAAAA+TGG + tig0024815:41052-41071 None:intergenic 35.0%
ATATAGACTGATACACGGAT+AGG + tig0024815:41349-41368 None:intergenic 35.0%
TATCCGTGTATCAGTCTATA+TGG - tig0024815:41348-41367 Msa1420490:intron 35.0%
TATGGTTTAATCAGTCTGCA+GGG + tig0024815:41575-41594 None:intergenic 35.0%
CTACCAAAGGAAATAAGGTA+TGG + tig0024815:41694-41713 None:intergenic 35.0%
GAAGCATGACATTATTGACA+TGG + tig0024815:41957-41976 None:intergenic 35.0%
! GTTTTCATGAGCTATCTTGA+TGG - tig0024815:42288-42307 Msa1420490:intron 35.0%
! TTCTAAGTGTGACACGTTTT+TGG + tig0024815:42508-42527 None:intergenic 35.0%
! ATTTAATGGACCACACACTA+TGG - tig0024815:42566-42585 Msa1420490:CDS 35.0%
CTAATCCTATTTGATCTCCT+GGG + tig0024815:42978-42997 None:intergenic 35.0%
TCTAATCCTATTTGATCTCC+TGG + tig0024815:42979-42998 None:intergenic 35.0%
GAGAAGGTCCAAAAGAATTA+GGG - tig0024815:43115-43134 Msa1420490:CDS 35.0%
! AACAATGGCCCTAATTCTTT+TGG + tig0024815:43126-43145 None:intergenic 35.0%
GGAGAAAGTCCAAAAGAATT+AGG - tig0024815:43294-43313 Msa1420490:five_prime_UTR 35.0%
GAGAAGGTCAAAAAGAATCA+GGG - tig0024815:43469-43488 Msa1420490:five_prime_UTR 35.0%
AAAAATGTGGAGAAACAAGC+TGG - tig0024815:43776-43795 Msa1420490:five_prime_UTR 35.0%
AGCTGGAGATATCAAGAAAT+TGG - tig0024815:43793-43812 Msa1420490:five_prime_UTR 35.0%
GAGTGCAGAAGTAATGTAAA+AGG - tig0024815:43877-43896 Msa1420490:five_prime_UTR 35.0%
AATCTAGTCCAGAAAGAGAA+AGG - tig0024815:44101-44120 Msa1420490:five_prime_UTR 35.0%
CCTGTATAGGAAAGAGATAA+TGG + tig0024815:44182-44201 None:intergenic 35.0%
CCATTATCTCTTTCCTATAC+AGG - tig0024815:44179-44198 Msa1420490:five_prime_UTR 35.0%
TAACAACCCTCTTACTCATT+GGG - tig0024815:44217-44236 Msa1420490:five_prime_UTR 35.0%
! AAATATTGGCTGTTGAGAGA+AGG - tig0024815:44406-44425 Msa1420490:five_prime_UTR 35.0%
! AATATTGGCTGTTGAGAGAA+GGG - tig0024815:44407-44426 Msa1420490:five_prime_UTR 35.0%
CAAGCTTATGTCTCAAAAGA+TGG + tig0024815:44466-44485 None:intergenic 35.0%
CCAAACATGATGAATGATTG+AGG + tig0024815:44619-44638 None:intergenic 35.0%
CCTCAATCATTCATCATGTT+TGG - tig0024815:44616-44635 Msa1420490:intron 35.0%
! TCTTGTTTCCTAAGACTCTT+AGG - tig0024815:44659-44678 Msa1420490:intron 35.0%
CTCTGAACTCTTCATATCTA+TGG + tig0024815:44894-44913 None:intergenic 35.0%
GAAAGAGATTTAGTGTTAGC+TGG - tig0024815:44927-44946 Msa1420490:intron 35.0%
TCAAAGTTCCAAGAACAAAC+GGG - tig0024815:45008-45027 Msa1420490:intron 35.0%
CAACAAAAATTTGAGAAGCC+GGG + tig0024815:45069-45088 None:intergenic 35.0%
GCAACAAAAATTTGAGAAGC+CGG + tig0024815:45070-45089 None:intergenic 35.0%
! GTTGCTTTGTATTCTTCTGA+TGG - tig0024815:45085-45104 Msa1420490:five_prime_UTR 35.0%
ATGTGGATACTAAAGTGAGA+AGG - tig0024815:45141-45160 Msa1420490:intron 35.0%
TACTAAAGTGAGAAGGAAAG+AGG - tig0024815:45148-45167 Msa1420490:intron 35.0%
AAAACATTCAAGCACAAACC+TGG + tig0024815:45284-45303 None:intergenic 35.0%
! TGCTTTTATGATTTCCCTTC+AGG - tig0024815:45366-45385 Msa1420490:intron 35.0%
GCATACATAAAGTTTCCTGA+AGG + tig0024815:45384-45403 None:intergenic 35.0%
GGAAACTTTATGTATGCTTC+AGG - tig0024815:45387-45406 Msa1420490:intron 35.0%
! GGAAACTTTTGCCGAATATA+CGG - tig0024815:45408-45427 Msa1420490:intron 35.0%
CTATGCACAAAGAGTTAACT+CGG - tig0024815:45471-45490 Msa1420490:five_prime_UTR 35.0%
CCACAATTAAAAACAAGCAG+TGG + tig0024815:45668-45687 None:intergenic 35.0%
!!! CCACTGCTTGTTTTTAATTG+TGG - tig0024815:45665-45684 Msa1420490:intron 35.0%
!!! CTGCTTGTTTTTAATTGTGG+AGG - tig0024815:45668-45687 Msa1420490:intron 35.0%
GGGAGCTTAAATTTGTAAAC+AGG + tig0024815:45839-45858 None:intergenic 35.0%
TGAAATAAGGATATACCCTG+TGG + tig0024815:45897-45916 None:intergenic 35.0%
CATGAGTAATTAGAGGATGA+AGG - tig0024815:45961-45980 Msa1420490:intron 35.0%
! AACACTAATAGTGGCATTGA+CGG + tig0024815:46046-46065 None:intergenic 35.0%
TCTGTTACAAGGCTTGTATT+TGG - tig0024815:46105-46124 Msa1420490:five_prime_UTR 35.0%
TCCCTTGTGGAAAATTTACT+TGG - tig0024815:46219-46238 Msa1420490:five_prime_UTR 35.0%
! GACCAAGTAAATTTTCCACA+AGG + tig0024815:46224-46243 None:intergenic 35.0%
AATTTACTTGGTCAACTTGC+TGG - tig0024815:46231-46250 Msa1420490:five_prime_UTR 35.0%
TTGGTTGCCATACATGATTA+GGG + tig0024815:46290-46309 None:intergenic 35.0%
ATTGGTTGCCATACATGATT+AGG + tig0024815:46291-46310 None:intergenic 35.0%
TATGGCAACCAATACAAAGA+AGG - tig0024815:46298-46317 Msa1420490:five_prime_UTR 35.0%
GGAAACATCAAATGACATGT+AGG - tig0024815:46370-46389 Msa1420490:intron 35.0%
ACATCAAATGACATGTAGGT+AGG - tig0024815:46374-46393 Msa1420490:intron 35.0%
! GCTACTGTCATTACATTTTC+TGG - tig0024815:46405-46424 Msa1420490:intron 35.0%
!!! CATTTTCTGGAACTGACTTT+CGG - tig0024815:46418-46437 Msa1420490:intron 35.0%
! ACACTGCCAGTTATGAATTT+TGG + tig0024815:46575-46594 None:intergenic 35.0%
! AACAGCAAAAGTGTACTTGA+AGG + tig0024815:46758-46777 None:intergenic 35.0%
ATAATGCAGTTCAATAAGCG+AGG - tig0024815:46821-46840 Msa1420490:intron 35.0%
AAGCTTGAGACTTATCGAAA+TGG - tig0024815:46899-46918 Msa1420490:intron 35.0%
AGATGTATGCACAACTTCTT+CGG + tig0024815:46930-46949 None:intergenic 35.0%
TGTAATCTCAAAACGCTAAG+TGG - tig0024815:46956-46975 Msa1420490:intron 35.0%
CGATGCTTCAACTAAAAAAG+TGG - tig0024815:47059-47078 Msa1420490:five_prime_UTR 35.0%
TTATGAACAAGTCACCTAGA+TGG - tig0024815:47095-47114 Msa1420490:five_prime_UTR 35.0%
TATGAACAAGTCACCTAGAT+GGG - tig0024815:47096-47115 Msa1420490:five_prime_UTR 35.0%
! AACTCGACTTCTAGAAACTA+TGG - tig0024815:47196-47215 Msa1420490:five_prime_UTR 35.0%
! AAGTACCTTTTCATTTACCG+CGG - tig0024815:47306-47325 Msa1420490:five_prime_UTR 35.0%
AAAATCCGCGGTAAATGAAA+AGG + tig0024815:47314-47333 None:intergenic 35.0%
! TTTTCATTTACCGCGGATTT+TGG - tig0024815:47313-47332 Msa1420490:five_prime_UTR 35.0%
!!! ATCTACCATCCAGTTTTAGA+GGG - tig0024815:47386-47405 Msa1420490:five_prime_UTR 35.0%
!! TTAAACCCTCTAAAACTGGA+TGG + tig0024815:47394-47413 None:intergenic 35.0%
AGATACCATTTGAAGAGACT+TGG - tig0024815:47457-47476 Msa1420490:five_prime_UTR 35.0%
GATACCATTTGAAGAGACTT+GGG - tig0024815:47458-47477 Msa1420490:five_prime_UTR 35.0%
!! CAAAGAAACAGCCTTATTGA+TGG + tig0024815:47506-47525 None:intergenic 35.0%
!! AATAAGGCTGTTTCTTTGTG+TGG - tig0024815:47508-47527 Msa1420490:five_prime_UTR 35.0%
!! ATAAGGCTGTTTCTTTGTGT+GGG - tig0024815:47509-47528 Msa1420490:five_prime_UTR 35.0%
GTTTCTTTGTGTGGGAAAAA+TGG - tig0024815:47517-47536 Msa1420490:five_prime_UTR 35.0%
ATTAAAAACTTACCCTGTGC+TGG + tig0024815:47548-47567 None:intergenic 35.0%
! CATCTAAAGTCACACATGAT+CGG - tig0024815:47642-47661 Msa1420490:intron 35.0%
! TTGCATTTGTTCTTGTTGTG+TGG - tig0024815:47741-47760 Msa1420490:five_prime_UTR 35.0%
CACTGTATCACTAAAACATG+CGG + tig0024815:47983-48002 None:intergenic 35.0%
! AAATTTTCATTCCGCACAGA+AGG + tig0024815:48122-48141 None:intergenic 35.0%
! GTGCGGAATGAAAATTTTAG+TGG - tig0024815:48125-48144 Msa1420490:intron 35.0%
TTCAAATGCAAGAAAAGGAC+GGG - tig0024815:48278-48297 Msa1420490:five_prime_UTR 35.0%
TTACGTGGATTCAATTTACG+TGG + tig0024815:48451-48470 None:intergenic 35.0%
TCATGGCCAATATAGGTAAA+CGG + tig0024815:48772-48791 None:intergenic 35.0%
AACACTCTTCATATGTAGCA+TGG + tig0024815:48808-48827 None:intergenic 35.0%
TGAACAATTCCTTCCTCAAA+AGG + tig0024815:48863-48882 None:intergenic 35.0%
!! TTTTGAGGAAGGAATTGTTC+AGG - tig0024815:48862-48881 Msa1420490:five_prime_UTR 35.0%
!! GGTCTTAGTCTAAGATGTTT+TGG - tig0024815:49044-49063 Msa1420490:five_prime_UTR 35.0%
TGCTGTAATGTTACTGTACT+TGG - tig0024815:49091-49110 Msa1420490:five_prime_UTR 35.0%
GAAGAAGAGTTCAGAGAAAT+AGG - tig0024815:49267-49286 Msa1420490:intron 35.0%
!! AGTGTTAGTTGGTGTTGTAA+TGG - tig0024815:49307-49326 Msa1420490:intron 35.0%
!! GTGTTAGTTGGTGTTGTAAT+GGG - tig0024815:49308-49327 Msa1420490:intron 35.0%
!! CTTGTAACTTTGAAGCCAAA+GGG + tig0024815:49370-49389 None:intergenic 35.0%
!! TCTTGTAACTTTGAAGCCAA+AGG + tig0024815:49371-49390 None:intergenic 35.0%
GTTAACAACTCTTTGTGCAT+AGG + tig0024815:49453-49472 None:intergenic 35.0%
TGCACAAAGAGTTGTTAACT+CGG - tig0024815:49454-49473 Msa1420490:intron 35.0%
GTTTCCTAAGCAAATATGAC+CGG + tig0024815:49563-49582 None:intergenic 35.0%
ACATCGTATCAATAGACTCA+AGG + tig0024815:49593-49612 None:intergenic 35.0%
CCACAAATAAAAACAAGCAG+AGG + tig0024815:49650-49669 None:intergenic 35.0%
!!! CCTCTGCTTGTTTTTATTTG+TGG - tig0024815:49647-49666 Msa1420490:intron 35.0%
!!! CTGCTTGTTTTTATTTGTGG+AGG - tig0024815:49650-49669 Msa1420490:intron 35.0%
GGGAGCTTAAATTTGTAAAC+AGG + tig0024815:45839-45858 None:intergenic 35.0%
TAATGAGCTCTTCTGTTGTT+GGG + tig0024815:49846-49865 None:intergenic 35.0%
TTAATGAGCTCTTCTGTTGT+TGG + tig0024815:49847-49866 None:intergenic 35.0%
! AACACTAATAGTGGCATTGA+CGG + tig0024815:46046-46065 None:intergenic 35.0%
! TGTGTCGATAACACTAATAG+TGG + tig0024815:50043-50062 None:intergenic 35.0%
GTTGAAGAAAACGTTGTACT+TGG - tig0024815:50077-50096 Msa1420490:five_prime_UTR 35.0%
TACAGTCCTTGATTTCTTGA+AGG - tig0024815:50247-50266 Msa1420490:intron 35.0%
ACAGTCCTTGATTTCTTGAA+GGG - tig0024815:50248-50267 Msa1420490:intron 35.0%
AGTTACCCTTCAAGAAATCA+AGG + tig0024815:50256-50275 None:intergenic 35.0%
TCTGAAAATATCACGCCAAA+AGG + tig0024815:50506-50525 None:intergenic 35.0%
TAAGCGCGAGACTAATATTT+GGG - tig0024815:50530-50549 Msa1420490:intron 35.0%
CAATGGAGAAAGAGTCTGAA+AGG + tig0024815:40482-40501 None:intergenic 40.0%
! TCCAATCTGAAGCTCGAAAA+TGG - tig0024815:40547-40566 Msa1420490:three_prime_UTR 40.0%
CAGAGAAGAGAGCTAAAGAT+CGG + tig0024815:40594-40613 None:intergenic 40.0%
!! TAGTCGTTTTCTCTCTCACA+AGG - tig0024815:40691-40710 Msa1420490:three_prime_UTR 40.0%
!!! AGGGCCTGTTTTGTTTTGAT+TGG - tig0024815:40995-41014 Msa1420490:CDS 40.0%
GAAGCTATTCGAGAAGAAGA+GGG - tig0024815:41146-41165 Msa1420490:intron 40.0%
ATTTGACCAGATTCGACAAG+TGG - tig0024815:41169-41188 Msa1420490:intron 40.0%
CTCTGAATCTGAACAGTCTT+AGG + tig0024815:41195-41214 None:intergenic 40.0%
CTAAGACTGTTCAGATTCAG+AGG - tig0024815:41193-41212 Msa1420490:intron 40.0%
TTCAGATTCAGAGGAAGAAG+AGG - tig0024815:41202-41221 Msa1420490:intron 40.0%
!!! AGAAGAGGATTTTGAAGCAG+AGG - tig0024815:41217-41236 Msa1420490:intron 40.0%
!!! GATTTTGAAGCAGAGGTTGA+AGG - tig0024815:41224-41243 Msa1420490:intron 40.0%
! CCAAATTTCTAGACAGCTCA+AGG + tig0024815:41287-41306 None:intergenic 40.0%
CCTTGAGCTGTCTAGAAATT+TGG - tig0024815:41284-41303 Msa1420490:intron 40.0%
GCTGTCTAGAAATTTGGATG+TGG - tig0024815:41290-41309 Msa1420490:intron 40.0%
GTATGGTTTAATCAGTCTGC+AGG + tig0024815:41576-41595 None:intergenic 40.0%
! TGAGCTATCTTGATGGATGT+AGG - tig0024815:42295-42314 Msa1420490:intron 40.0%
! GAGCTATCTTGATGGATGTA+GGG - tig0024815:42296-42315 Msa1420490:intron 40.0%
! ATCTTGATGGATGTAGGGAA+AGG - tig0024815:42301-42320 Msa1420490:intron 40.0%
ACACTATGGCATGATAGAGT+TGG - tig0024815:42580-42599 Msa1420490:CDS 40.0%
!! TAGAGTTGGTGTGTGAATGT+AGG - tig0024815:42594-42613 Msa1420490:CDS 40.0%
! AACACTACCTTTTCAGCTGA+AGG - tig0024815:42843-42862 Msa1420490:intron 40.0%
ACTTGAACCTTCAGCTGAAA+AGG + tig0024815:42853-42872 None:intergenic 40.0%
ATGGTCTCAGCGAAAAAGAA+AGG + tig0024815:42915-42934 None:intergenic 40.0%
GCTTGGATATCTATTAGGCA+TGG + tig0024815:42934-42953 None:intergenic 40.0%
CCAATCGGATATTGAATGCT+TGG + tig0024815:42951-42970 None:intergenic 40.0%
CCAAGCATTCAATATCCGAT+TGG - tig0024815:42948-42967 Msa1420490:intron 40.0%
AATATCCGATTGGAAAACCC+AGG - tig0024815:42958-42977 Msa1420490:intron 40.0%
GAAAACCCAGGAGATCAAAT+AGG - tig0024815:42970-42989 Msa1420490:intron 40.0%
ACCACCACCTACTACAATAT+CGG + tig0024815:43087-43106 None:intergenic 40.0%
! ATATTGTAGTAGGTGGTGGT+GGG - tig0024815:43087-43106 Msa1420490:CDS 40.0%
GGAGAAGGTCCAAAAGAATT+AGG - tig0024815:43114-43133 Msa1420490:CDS 40.0%
ATTAGGGCCATTGTTGAAGT+TGG - tig0024815:43131-43150 Msa1420490:CDS 40.0%
!! TAGATGGTGGTGGAGAAATA+AGG - tig0024815:43174-43193 Msa1420490:exon 40.0%
! AACCATGGCCCTAATTCTTT+TGG + tig0024815:43306-43325 None:intergenic 40.0%
GGAGAAGGTCAAAAAGAATC+AGG - tig0024815:43468-43487 Msa1420490:five_prime_UTR 40.0%
GTCAAAAAGAATCAGGGCAA+TGG - tig0024815:43475-43494 Msa1420490:five_prime_UTR 40.0%
GCGAGATATTAGAAAAGCTG+AGG - tig0024815:43561-43580 Msa1420490:intron 40.0%
TGAAATGGAGCTATGAAGCA+CGG + tig0024815:43715-43734 None:intergenic 40.0%
TGCTTCATAGCTCCATTTCA+AGG - tig0024815:43715-43734 Msa1420490:intron 40.0%
! TTAGTGTGATGGCCTTGAAA+TGG + tig0024815:43730-43749 None:intergenic 40.0%
! GCTTTTACCTATATCAGGTG+TGG + tig0024815:43914-43933 None:intergenic 40.0%
AGACGAACAAACTACCAATC+TGG - tig0024815:44133-44152 Msa1420490:five_prime_UTR 40.0%
GAACACAGTTGAAACCAGAT+TGG + tig0024815:44150-44169 None:intergenic 40.0%
CTAACAACCCTCTTACTCAT+TGG - tig0024815:44216-44235 Msa1420490:five_prime_UTR 40.0%
ACAGAACCCAATGAGTAAGA+GGG + tig0024815:44226-44245 None:intergenic 40.0%
! ACTCTTAGGCTAAGAGGTTT+TGG - tig0024815:44673-44692 Msa1420490:five_prime_UTR 40.0%
!!! TAGGCTAAGAGGTTTTGGTT+TGG - tig0024815:44678-44697 Msa1420490:five_prime_UTR 40.0%
!! AGTGTTAGCTGGTGTTGTAA+TGG - tig0024815:44938-44957 Msa1420490:intron 40.0%
!! GTGTTAGCTGGTGTTGTAAT+GGG - tig0024815:44939-44958 Msa1420490:intron 40.0%
!! CTTGGAACTTTGAAGCCAAA+GGG + tig0024815:45001-45020 None:intergenic 40.0%
!! TCTTGGAACTTTGAAGCCAA+AGG + tig0024815:45002-45021 None:intergenic 40.0%
CAAAGTTCCAAGAACAAACG+GGG - tig0024815:45009-45028 Msa1420490:intron 40.0%
! TTTTGTTCCCCGTTTGTTCT+TGG + tig0024815:45019-45038 None:intergenic 40.0%
CATCTACAGCAAAATGGATG+TGG - tig0024815:45124-45143 Msa1420490:intron 40.0%
! AGTGAGAAGGAAAGAGGTTT+TGG - tig0024815:45154-45173 Msa1420490:intron 40.0%
! GTGAGAAGGAAAGAGGTTTT+GGG - tig0024815:45155-45174 Msa1420490:intron 40.0%
TGGGTAGTCTTTGTGATCAA+AGG - tig0024815:45174-45193 Msa1420490:intron 40.0%
GGGTAGTCTTTGTGATCAAA+GGG - tig0024815:45175-45194 Msa1420490:intron 40.0%
CGAGTTAACTCTTTGTGCAT+AGG + tig0024815:45473-45492 None:intergenic 40.0%
GAGTTAACTCGGAAAGAAAG+CGG - tig0024815:45482-45501 Msa1420490:five_prime_UTR 40.0%
GAGAACCCAACAACCTAAAA+GGG + tig0024815:45790-45809 None:intergenic 40.0%
TGAGAACCCAACAACCTAAA+AGG + tig0024815:45791-45810 None:intergenic 40.0%
TTGTTGGGTTCTCATCATCT+CGG - tig0024815:45797-45816 Msa1420490:five_prime_UTR 40.0%
AGCTCTTATGTTGTTGGGTT+GGG + tig0024815:45863-45882 None:intergenic 40.0%
AGCTGACACGTAGTGAAATA+AGG + tig0024815:45910-45929 None:intergenic 40.0%
ATTGGAGGTAGTTATGTTGG+AGG - tig0024815:46180-46199 Msa1420490:five_prime_UTR 40.0%
ACTGATCCCCTAATCATGTA+TGG - tig0024815:46280-46299 Msa1420490:five_prime_UTR 40.0%
TGGTTGCCATACATGATTAG+GGG + tig0024815:46289-46308 None:intergenic 40.0%
!!! TTGTTTTTGGAGATCCACAC+AGG - tig0024815:46349-46368 Msa1420490:five_prime_UTR 40.0%
GTCATTTGATGTTTCCTGTG+TGG + tig0024815:46366-46385 None:intergenic 40.0%
! GACATGTAGGTAGGTTTTTC+TGG - tig0024815:46383-46402 Msa1420490:intron 40.0%
ACCGAGCCAAAATTCATAAC+TGG - tig0024815:46566-46585 Msa1420490:intron 40.0%
!!! GCCAGTTATGAATTTTGGCT+CGG + tig0024815:46570-46589 None:intergenic 40.0%
AATAGAAAGCCCGCAACAAA+TGG - tig0024815:46875-46894 Msa1420490:intron 40.0%
! TCAAGCTTTCCATTTGTTGC+GGG + tig0024815:46887-46906 None:intergenic 40.0%
! CTCAAGCTTTCCATTTGTTG+CGG + tig0024815:46888-46907 None:intergenic 40.0%
CTTGAGACTTATCGAAATGG+AGG - tig0024815:46902-46921 Msa1420490:intron 40.0%
GAAGAAGTTGTGCATACATC+TGG - tig0024815:46929-46948 Msa1420490:intron 40.0%
ACTCTTCATCAGCAATTAGG+TGG + tig0024815:47032-47051 None:intergenic 40.0%
GAGTTATCTGCCTTCACAAA+AGG + tig0024815:47181-47200 None:intergenic 40.0%
! TCGACTTCTAGAAACTATGG+TGG - tig0024815:47199-47218 Msa1420490:five_prime_UTR 40.0%
TCTAGAAACTATGGTGGTAC+CGG - tig0024815:47205-47224 Msa1420490:five_prime_UTR 40.0%
ACTGATACTCAAACCAATGC+CGG + tig0024815:47227-47246 None:intergenic 40.0%
TAAGTGCCTAGCTGAACTAA+TGG - tig0024815:47246-47265 Msa1420490:five_prime_UTR 40.0%
AAGTGCCTAGCTGAACTAAT+GGG - tig0024815:47247-47266 Msa1420490:five_prime_UTR 40.0%
!! GAAAAGGTACTTCCAATCTG+TGG + tig0024815:47298-47317 None:intergenic 40.0%
TCCAATAACTGAGGTGAAGA+AGG - tig0024815:47351-47370 Msa1420490:five_prime_UTR 40.0%
ACCTTCTTCACCTCAGTTAT+TGG + tig0024815:47355-47374 None:intergenic 40.0%
!! GATCTACCATCCAGTTTTAG+AGG - tig0024815:47385-47404 Msa1420490:five_prime_UTR 40.0%
!! GGCTTTAAACCCTCTAAAAC+TGG + tig0024815:47398-47417 None:intergenic 40.0%
! TTTAAAGCCGTTGTGGTTGA+TGG - tig0024815:47409-47428 Msa1420490:five_prime_UTR 40.0%
TTAAAGCCGTTGTGGTTGAT+GGG - tig0024815:47410-47429 Msa1420490:five_prime_UTR 40.0%
GTATCCCAAGTCTCTTCAAA+TGG + tig0024815:47465-47484 None:intergenic 40.0%
CGATCATGTGTGACTTTAGA+TGG + tig0024815:47644-47663 None:intergenic 40.0%
GAGAAAGATTCATGGGTTTG+TGG - tig0024815:47840-47859 Msa1420490:five_prime_UTR 40.0%
CAAACTGAAGTTGAACCATC+AGG + tig0024815:48096-48115 None:intergenic 40.0%
! TGCCTTGAAAAACTTTGGAG+CGG - tig0024815:48174-48193 Msa1420490:intron 40.0%
! ATCCGCTCCAAAGTTTTTCA+AGG + tig0024815:48179-48198 None:intergenic 40.0%
AGCAAGCATCAAACTTGTGA+GGG + tig0024815:48249-48268 None:intergenic 40.0%
AAGCAAGCATCAAACTTGTG+AGG + tig0024815:48250-48269 None:intergenic 40.0%
CAAGTTTGATGCTTGCTTCA+AGG - tig0024815:48252-48271 Msa1420490:intron 40.0%
! AATCCACGTAACTTGCATGT+TGG - tig0024815:48460-48479 Msa1420490:five_prime_UTR 40.0%
TTGAAGCAACTCGTCGAATT+CGG - tig0024815:48684-48703 Msa1420490:five_prime_UTR 40.0%
CGAATGGTGAATGTAGTGAA+AGG - tig0024815:48735-48754 Msa1420490:five_prime_UTR 40.0%
! ATGGATTACATCTGCTGTCA+TGG + tig0024815:48789-48808 None:intergenic 40.0%
! AGAGTGTTTGAAATGTGGGA+TGG - tig0024815:48820-48839 Msa1420490:five_prime_UTR 40.0%
! TGTTTGAAATGTGGGATGGA+TGG - tig0024815:48824-48843 Msa1420490:five_prime_UTR 40.0%
!! GTCTCAAAACCTTTTGAGGA+AGG - tig0024815:48851-48870 Msa1420490:five_prime_UTR 40.0%
TTGTTAACTCGGAAAGAGAG+CGG - tig0024815:49465-49484 Msa1420490:intron 40.0%
GAGTCTATTGATACGATGTC+TGG - tig0024815:49594-49613 Msa1420490:intron 40.0%
TATTGATACGATGTCTGGAG+AGG - tig0024815:49599-49618 Msa1420490:intron 40.0%
! GAGCTCTCAGTATGTTTTCT+CGG + tig0024815:49720-49739 None:intergenic 40.0%
! AACAACCTAAAAGGGCTAGT+CGG + tig0024815:49760-49779 None:intergenic 40.0%
!!! ACTAGCCCTTTTAGGTTGTT+GGG - tig0024815:49760-49779 Msa1420490:intron 40.0%
GAGAACCCAACAACCTAAAA+GGG + tig0024815:45790-45809 None:intergenic 40.0%
TGAGAACCCAACAACCTAAA+AGG + tig0024815:45791-45810 None:intergenic 40.0%
TTGTTGGGTTCTCATCATCT+CGG - tig0024815:45797-45816 Msa1420490:five_prime_UTR 40.0%
AGCTCATTAAAGTGACTGCA+GGG - tig0024815:49857-49876 Msa1420490:five_prime_UTR 40.0%
AGAAGACAATGCAAACTGCA+GGG + tig0024815:50188-50207 None:intergenic 40.0%
CATTCTGGCCATCAAAAAGT+CGG + tig0024815:50334-50353 None:intergenic 40.0%
!! ACTTTTTGATGGCCAGAATG+CGG - tig0024815:50334-50353 Msa1420490:intron 40.0%
AATGCGGAGTTTAGCACATA+CGG - tig0024815:50350-50369 Msa1420490:intron 40.0%
!! TTGACTCCAACTTTCAGGTT+GGG + tig0024815:50464-50483 None:intergenic 40.0%
! TTTGACTCCAACTTTCAGGT+TGG + tig0024815:50465-50484 None:intergenic 40.0%
CTAAGCGCGAGACTAATATT+TGG - tig0024815:50529-50548 Msa1420490:intron 40.0%
ATTTCCAATGATCGGCATTG+GGG + tig0024815:50825-50844 None:intergenic 40.0%
GATTTCCAATGATCGGCATT+GGG + tig0024815:50826-50845 None:intergenic 40.0%
TGATTTCCAATGATCGGCAT+TGG + tig0024815:50827-50846 None:intergenic 40.0%
GAAGAGCGGAAAAATCGCAA+TGG + tig0024815:40529-40548 None:intergenic 45.0%
!! GCCATTTTCGAGCTTCAGAT+TGG + tig0024815:40551-40570 None:intergenic 45.0%
ATGGCAATTGAAGCTCGTTG+AGG - tig0024815:40566-40585 Msa1420490:three_prime_UTR 45.0%
TTGCTATCTCAGGTCCTGTT+TGG - tig0024815:40893-40912 Msa1420490:three_prime_UTR 45.0%
GGAAGCTATTCGAGAAGAAG+AGG - tig0024815:41145-41164 Msa1420490:intron 45.0%
CATGGTTTGATCAGTCTGCA+AGG + tig0024815:42233-42252 None:intergenic 45.0%
CTCTATCATGCCATAGTGTG+TGG + tig0024815:42579-42598 None:intergenic 45.0%
TTATAGAGGGAATCACGCGT+GGG + tig0024815:42784-42803 None:intergenic 45.0%
TTTATAGAGGGAATCACGCG+TGG + tig0024815:42785-42804 None:intergenic 45.0%
! GATCTCCTGGGTTTTCCAAT+CGG + tig0024815:42966-42985 None:intergenic 45.0%
AGGATTAGAGTTCGATGCGA+TGG - tig0024815:42990-43009 Msa1420490:intron 45.0%
!! ATGACGGATGGTGTTGAAGT+TGG - tig0024815:43020-43039 Msa1420490:intron 45.0%
AGGAGGACCGATATTGTAGT+AGG - tig0024815:43077-43096 Msa1420490:CDS 45.0%
AGGACCGATATTGTAGTAGG+TGG - tig0024815:43080-43099 Msa1420490:CDS 45.0%
ACCGATATTGTAGTAGGTGG+TGG - tig0024815:43083-43102 Msa1420490:CDS 45.0%
! GATATTGTAGTAGGTGGTGG+TGG - tig0024815:43086-43105 Msa1420490:CDS 45.0%
! TATTGTAGTAGGTGGTGGTG+GGG - tig0024815:43088-43107 Msa1420490:CDS 45.0%
!! TGGTGGTGGAGAAATAAGGA+TGG - tig0024815:43178-43197 Msa1420490:exon 45.0%
GGTGGAGAAATAAGGATGGA+TGG - tig0024815:43182-43201 Msa1420490:five_prime_UTR 45.0%
! AGGATGGATGGTGTTGAAGT+TGG - tig0024815:43194-43213 Msa1420490:five_prime_UTR 45.0%
! ATGGATGGTGTTGAAGTTGG+CGG - tig0024815:43197-43216 Msa1420490:five_prime_UTR 45.0%
AGGAGGACAGATGGTGTAAT+AGG - tig0024815:43257-43276 Msa1420490:five_prime_UTR 45.0%
AGGACAGATGGTGTAATAGG+TGG - tig0024815:43260-43279 Msa1420490:five_prime_UTR 45.0%
ACAGATGGTGTAATAGGTGG+TGG - tig0024815:43263-43282 Msa1420490:five_prime_UTR 45.0%
! ATGGTGTAATAGGTGGTGGT+GGG - tig0024815:43267-43286 Msa1420490:five_prime_UTR 45.0%
GTCCAAAAGAATTAGGGCCA+TGG - tig0024815:43121-43140 Msa1420490:CDS 45.0%
ATTAGGGCCATGGTTGAAGT+TGG - tig0024815:43311-43330 Msa1420490:five_prime_UTR 45.0%
!! TAGATGGTGGTGGAGAAATG+AGG - tig0024815:43354-43373 Msa1420490:five_prime_UTR 45.0%
! AGGATGGATGGTGTTGAAGT+TGG - tig0024815:43194-43213 Msa1420490:five_prime_UTR 45.0%
! ATGGATGGTGTTGAAGTTGG+CGG - tig0024815:43197-43216 Msa1420490:five_prime_UTR 45.0%
ACCACCATCTACAACTCCAT+CGG + tig0024815:43441-43460 None:intergenic 45.0%
ATCAGGGCAATGGATGAAGT+TGG - tig0024815:43485-43504 Msa1420490:five_prime_UTR 45.0%
TGTGTCTGACACGACACTTA+TGG + tig0024815:43665-43684 None:intergenic 45.0%
! GTGCGGCTTTTACCTATATC+AGG + tig0024815:43919-43938 None:intergenic 45.0%
AATCGATCGGAGAGTTCTAC+CGG + tig0024815:43986-44005 None:intergenic 45.0%
GATCTGCACCTTTCTCTTTC+TGG + tig0024815:44112-44131 None:intergenic 45.0%
CACAGAACCCAATGAGTAAG+AGG + tig0024815:44227-44246 None:intergenic 45.0%
!!! AAAGACTGGTTTTGCGCCTA+GGG - tig0024815:44340-44359 Msa1420490:five_prime_UTR 45.0%
GAGTACTAATCATGCTCCCT+AGG + tig0024815:44359-44378 None:intergenic 45.0%
CCTCTTAGCCTAAGAGTCTT+AGG + tig0024815:44670-44689 None:intergenic 45.0%
CCTAAGACTCTTAGGCTAAG+AGG - tig0024815:44667-44686 Msa1420490:five_prime_UTR 45.0%
TCATTCAAGCACATAGAGCC+CGG - tig0024815:45048-45067 Msa1420490:five_prime_UTR 45.0%
AATGGCAGAAGGGTTTCTGT+AGG + tig0024815:45259-45278 None:intergenic 45.0%
AAACCTGGTCAATGGCAGAA+GGG + tig0024815:45269-45288 None:intergenic 45.0%
TCAAGCACAAACCTGGTCAA+TGG + tig0024815:45277-45296 None:intergenic 45.0%
! CTTTTGCCGAATATACGGCT+AGG - tig0024815:45413-45432 Msa1420490:intron 45.0%
GTTTGAGAAGCAGCATAGAG+TGG - tig0024815:45504-45523 Msa1420490:five_prime_UTR 45.0%
AATGGAAAGAGAGGCTTCAC+AGG - tig0024815:45537-45556 Msa1420490:five_prime_UTR 45.0%
AAAGAGAGGCTTCACAGGTT+AGG - tig0024815:45542-45561 Msa1420490:five_prime_UTR 45.0%
AAGAGAGGCTTCACAGGTTA+GGG - tig0024815:45543-45562 Msa1420490:five_prime_UTR 45.0%
GTTTCCTGAGCAAATGTGAC+AGG + tig0024815:45580-45599 None:intergenic 45.0%
AGCAGTGGAATGGTTCACAA+GGG + tig0024815:45653-45672 None:intergenic 45.0%
AAGCAGTGGAATGGTTCACA+AGG + tig0024815:45654-45673 None:intergenic 45.0%
!!! CATTTCTGGCTAGCCCTTTT+AGG - tig0024815:45774-45793 Msa1420490:five_prime_UTR 45.0%
!!! GCTAGCCCTTTTAGGTTGTT+GGG - tig0024815:45782-45801 Msa1420490:five_prime_UTR 45.0%
!! CTTATGTTGTTGGGTTGGGA+GGG + tig0024815:45859-45878 None:intergenic 45.0%
!! TCTTATGTTGTTGGGTTGGG+AGG + tig0024815:45860-45879 None:intergenic 45.0%
GAGCTCTTATGTTGTTGGGT+TGG + tig0024815:45864-45883 None:intergenic 45.0%
AGCTCATTAAAGCGACCACA+GGG - tig0024815:45879-45898 Msa1420490:five_prime_UTR 45.0%
TAGAGGATGAAGGTCGTGTT+TGG - tig0024815:45971-45990 Msa1420490:intron 45.0%
TGTTGGAGGATCCTTTGATG+TGG - tig0024815:46194-46213 Msa1420490:five_prime_UTR 45.0%
GAATTGAACTCAACCCAACG+TGG - tig0024815:46481-46500 Msa1420490:intron 45.0%
GGCAACTCTGTTGAAGTAAG+TGG - tig0024815:46654-46673 Msa1420490:intron 45.0%
GAAGTTGTGCATACATCTGG+CGG - tig0024815:46932-46951 Msa1420490:intron 45.0%
TGTGTCGAAGACACTGGAAT+TGG - tig0024815:47121-47140 Msa1420490:five_prime_UTR 45.0%
TTTATAAGCCGGCCACAGAT+TGG - tig0024815:47283-47302 Msa1420490:five_prime_UTR 45.0%
! TAGAGGGTTTAAAGCCGTTG+TGG - tig0024815:47402-47421 Msa1420490:five_prime_UTR 45.0%
AGGTTTCCCATCAACCACAA+CGG + tig0024815:47419-47438 None:intergenic 45.0%
AGTCGCAAACGCCATCAATA+AGG - tig0024815:47492-47511 Msa1420490:five_prime_UTR 45.0%
AAAAATGGTGCTTCCAGCAC+AGG - tig0024815:47532-47551 Msa1420490:five_prime_UTR 45.0%
AAAATGGTGCTTCCAGCACA+GGG - tig0024815:47533-47552 Msa1420490:five_prime_UTR 45.0%
AGATTCATGGGTTTGTGGAG+AGG - tig0024815:47845-47864 Msa1420490:five_prime_UTR 45.0%
GTAGCAAGAAGGATCATTCG+AGG + tig0024815:47925-47944 None:intergenic 45.0%
GAAGCCACTGAGAACTAGTA+TGG - tig0024815:48008-48027 Msa1420490:intron 45.0%
CCACTGAGAACTAGTATGGT+GGG - tig0024815:48012-48031 Msa1420490:intron 45.0%
! AGCTTGCCTTCAGCAAGTTT+TGG - tig0024815:48035-48054 Msa1420490:intron 45.0%
! GCTTGCCTTCAGCAAGTTTT+GGG - tig0024815:48036-48055 Msa1420490:intron 45.0%
!! CTGTTCCCAAAACTTGCTGA+AGG + tig0024815:48044-48063 None:intergenic 45.0%
!!! CTTCAGCAAGTTTTGGGAAC+AGG - tig0024815:48042-48061 Msa1420490:intron 45.0%
! TCAGTTTGAAGCCTTCTGTG+CGG - tig0024815:48108-48127 Msa1420490:intron 45.0%
ATGTCAATGGAAGTGACTGC+AGG - tig0024815:48151-48170 Msa1420490:intron 45.0%
GCAGGTGCCTTGAAAAACTT+TGG - tig0024815:48169-48188 Msa1420490:intron 45.0%
TAGCCAACATGCAAGTTACG+TGG + tig0024815:48466-48485 None:intergenic 45.0%
TGAAGCAACTCGTCGAATTC+GGG - tig0024815:48685-48704 Msa1420490:five_prime_UTR 45.0%
TCTGCTGTCATGGCCAATAT+AGG + tig0024815:48779-48798 None:intergenic 45.0%
!! GTAACTTTGAAGCCAAAGGG+TGG + tig0024815:49367-49386 None:intergenic 45.0%
! CTTTTGCAGAATATGCGGCT+AGG - tig0024815:49393-49412 Msa1420490:intron 45.0%
GTTTGAGAAGCAGCATAGAG+TGG - tig0024815:45504-45523 Msa1420490:five_prime_UTR 45.0%
AATGGAAAGAGAGGCTTCAC+AGG - tig0024815:45537-45556 Msa1420490:five_prime_UTR 45.0%
AAAGAGAGGCTTCACAGGTT+AGG - tig0024815:45542-45561 Msa1420490:five_prime_UTR 45.0%
AAGAGAGGCTTCACAGGTTA+GGG - tig0024815:45543-45562 Msa1420490:five_prime_UTR 45.0%
! TGCACCGGTCATATTTGCTT+AGG - tig0024815:49556-49575 Msa1420490:intron 45.0%
AACATACTGAGAGCTCCTAC+TGG - tig0024815:49724-49743 Msa1420490:intron 45.0%
ACATACTGAGAGCTCCTACT+GGG - tig0024815:49725-49744 Msa1420490:intron 45.0%
!! TTGTTCCGACTAGCCCTTTT+AGG - tig0024815:49752-49771 Msa1420490:intron 45.0%
!!! GACTAGCCCTTTTAGGTTGT+TGG - tig0024815:49759-49778 Msa1420490:intron 45.0%
AGCTCTTCTGTTGTTGGGTT+GGG + tig0024815:49841-49860 None:intergenic 45.0%
GAGCTCATTAAAGTGACTGC+AGG - tig0024815:49856-49875 Msa1420490:five_prime_UTR 45.0%
GAAGACAATGCAAACTGCAG+GGG + tig0024815:50187-50206 None:intergenic 45.0%
GAGAAGACAATGCAAACTGC+AGG + tig0024815:50189-50208 None:intergenic 45.0%
TGTCAGGGAAACATTGCTGA+AGG - tig0024815:50297-50316 Msa1420490:intron 45.0%
ATGTGCTAAACTCCGCATTC+TGG + tig0024815:50349-50368 None:intergenic 45.0%
ATGCGGAGTTTAGCACATAC+GGG - tig0024815:50351-50370 Msa1420490:intron 45.0%
GCTTCTACGGGTAATGTTGT+GGG - tig0024815:50379-50398 Msa1420490:intron 45.0%
CTTCTACGGGTAATGTTGTG+GGG - tig0024815:50380-50399 Msa1420490:intron 45.0%
! GCATGACGACTTGGATTTCA+TGG - tig0024815:50402-50421 Msa1420490:intron 45.0%
AAAACCCCAATGCCGATCAT+TGG - tig0024815:50818-50837 Msa1420490:five_prime_UTR 45.0%
CGAGCTTCAGATTGGAAGAG+CGG + tig0024815:40543-40562 None:intergenic 50.0%
CTTAGGCCACTTGTCGAATC+TGG + tig0024815:41178-41197 None:intergenic 50.0%
ATGCGATGGCGAAAGGATGA+CGG - tig0024815:43004-43023 Msa1420490:intron 50.0%
! ACGGATGGTGTTGAAGTTGG+CGG - tig0024815:43023-43042 Msa1420490:intron 50.0%
AGGGCCATTGTTGAAGTTGG+TGG - tig0024815:43134-43153 Msa1420490:CDS 50.0%
!! GCCATTGTTGAAGTTGGTGG+CGG - tig0024815:43137-43156 Msa1420490:CDS 50.0%
ACCGCCACCAACTTCAACAA+TGG + tig0024815:43141-43160 None:intergenic 50.0%
!! ATTGTTGAAGTTGGTGGCGG+TGG - tig0024815:43140-43159 Msa1420490:CDS 50.0%
! AATGAGGCTGTAGATGGTGG+TGG - tig0024815:43164-43183 Msa1420490:exon 50.0%
! GATGGTGTAATAGGTGGTGG+TGG - tig0024815:43266-43285 Msa1420490:five_prime_UTR 50.0%
! TGGTGTAATAGGTGGTGGTG+GGG - tig0024815:43268-43287 Msa1420490:five_prime_UTR 50.0%
!! TAATAGGTGGTGGTGGGGAA+AGG - tig0024815:43273-43292 Msa1420490:five_prime_UTR 50.0%
! AATGAGGCTGTAGATGGTGG+TGG - tig0024815:43164-43183 Msa1420490:exon 50.0%
!! TGGTGGTGGAGAAATGAGGA+TGG - tig0024815:43358-43377 Msa1420490:five_prime_UTR 50.0%
GGTGGAGAAATGAGGATGGA+TGG - tig0024815:43362-43381 Msa1420490:five_prime_UTR 50.0%
AGGACCGATGGAGTTGTAGA+TGG - tig0024815:43434-43453 Msa1420490:five_prime_UTR 50.0%
ACCGATGGAGTTGTAGATGG+TGG - tig0024815:43437-43456 Msa1420490:five_prime_UTR 50.0%
! GATGGAGTTGTAGATGGTGG+TGG - tig0024815:43440-43459 Msa1420490:five_prime_UTR 50.0%
!! TTGTAGATGGTGGTGGCGAA+AGG - tig0024815:43447-43466 Msa1420490:five_prime_UTR 50.0%
AGGGCAATGGATGAAGTTGG+TGG - tig0024815:43488-43507 Msa1420490:five_prime_UTR 50.0%
!! ATGGATGAAGTTGGTGGCGA+TGG - tig0024815:43494-43513 Msa1420490:five_prime_UTR 50.0%
GTTGGCGATGGAGATGTACA+TGG - tig0024815:43530-43549 Msa1420490:intron 50.0%
GGAGATGTACATGGTGGTTG+TGG - tig0024815:43539-43558 Msa1420490:intron 50.0%
! AAGTGTCGTGTCAGACACAC+CGG - tig0024815:43666-43685 Msa1420490:intron 50.0%
TATGAAGCACGGACACTCCT+CGG + tig0024815:43704-43723 None:intergenic 50.0%
! GATTTAGCGGAGGCTTTGTG+CGG + tig0024815:43936-43955 None:intergenic 50.0%
CGAGGACATCACGGATTTAG+CGG + tig0024815:43949-43968 None:intergenic 50.0%
!!! CAAAGACTGGTTTTGCGCCT+AGG - tig0024815:44339-44358 Msa1420490:five_prime_UTR 50.0%
GCAAAATCAGCACCACCCTT+TGG - tig0024815:44983-45002 Msa1420490:intron 50.0%
!! GGAACTTTGAAGCCAAAGGG+TGG + tig0024815:44998-45017 None:intergenic 50.0%
GGATGGCTAGAGCATGAACA+TGG + tig0024815:45238-45257 None:intergenic 50.0%
GCAGAAGGGTTTCTGTAGGA+TGG + tig0024815:45255-45274 None:intergenic 50.0%
AAACCCTTCTGCCATTGACC+AGG - tig0024815:45263-45282 Msa1420490:intron 50.0%
CAAACCTGGTCAATGGCAGA+AGG + tig0024815:45270-45289 None:intergenic 50.0%
AGCGGTCCTAGCCGTATATT+CGG + tig0024815:45422-45441 None:intergenic 50.0%
TGCACCTGTCACATTTGCTC+AGG - tig0024815:45573-45592 Msa1420490:five_prime_UTR 50.0%
!!! GGCTAGCCCTTTTAGGTTGT+TGG - tig0024815:45781-45800 Msa1420490:five_prime_UTR 50.0%
GAGCTCATTAAAGCGACCAC+AGG - tig0024815:45878-45897 Msa1420490:five_prime_UTR 50.0%
CACAAGGGACTCCACATCAA+AGG + tig0024815:46208-46227 None:intergenic 50.0%
CTTTGATGTGGAGTCCCTTG+TGG - tig0024815:46206-46225 Msa1420490:five_prime_UTR 50.0%
AGTCTGAGCATAGCCACGTT+GGG + tig0024815:46497-46516 None:intergenic 50.0%
TCTTCGACACAGACCCATCT+AGG + tig0024815:47112-47131 None:intergenic 50.0%
!! AACTATGGTGGTACCGGCAT+TGG - tig0024815:47211-47230 Msa1420490:five_prime_UTR 50.0%
TGCCTAGCTGAACTAATGGG+CGG - tig0024815:47250-47269 Msa1420490:five_prime_UTR 50.0%
AGGTACTTCCAATCTGTGGC+CGG + tig0024815:47294-47313 None:intergenic 50.0%
! CTAGTCACAGCAGCTCTAAC+AGG + tig0024815:47439-47458 None:intergenic 50.0%
TCATGGGTTTGTGGAGAGGA+CGG - tig0024815:47849-47868 Msa1420490:five_prime_UTR 50.0%
TGCGGCAACTGGAAACAGAA+CGG - tig0024815:47883-47902 Msa1420490:five_prime_UTR 50.0%
GCCACTGAGAACTAGTATGG+TGG - tig0024815:48011-48030 Msa1420490:intron 50.0%
! CCCACCATACTAGTTCTCAG+TGG + tig0024815:48015-48034 None:intergenic 50.0%
AACAGGCAAGAAGAGACAGC+CGG - tig0024815:48059-48078 Msa1420490:intron 50.0%
! CCATCAGGCATCTCTTTTCC+CGG + tig0024815:48081-48100 None:intergenic 50.0%
GATGTGAAGTGTGCAGACAG+CGG - tig0024815:48196-48215 Msa1420490:intron 50.0%
AACTCGTCGAATTCGGGAGA+TGG - tig0024815:48691-48710 Msa1420490:five_prime_UTR 50.0%
AATTCGGGAGATGGAGAGGA+CGG - tig0024815:48700-48719 Msa1420490:five_prime_UTR 50.0%
GCAAAATCAGCACCACCCTT+TGG - tig0024815:44983-45002 Msa1420490:intron 50.0%
GGTTAGGGATGAGTATGCAC+CGG - tig0024815:45558-45577 Msa1420490:five_prime_UTR 50.0%
GTCGGAACAAACTTCCCAGT+AGG + tig0024815:49742-49761 None:intergenic 50.0%
!! CTTCTGTTGTTGGGTTGGGA+GGG + tig0024815:49837-49856 None:intergenic 50.0%
!! TCTTCTGTTGTTGGGTTGGG+AGG + tig0024815:49838-49857 None:intergenic 50.0%
GAGCTCTTCTGTTGTTGGGT+TGG + tig0024815:49842-49861 None:intergenic 50.0%
TGCGGAGTTTAGCACATACG+GGG - tig0024815:50352-50371 Msa1420490:intron 50.0%
AGTTTAGCACATACGGGGAC+TGG - tig0024815:50357-50376 Msa1420490:intron 50.0%
GGCTTCTACGGGTAATGTTG+TGG - tig0024815:50378-50397 Msa1420490:intron 50.0%
ATCTAGACTCCGACACGTTC+CGG - tig0024815:50434-50453 Msa1420490:intron 50.0%
!! AACTTTCAGGTTGGGTCTGC+CGG + tig0024815:50456-50475 None:intergenic 50.0%
ACTATTGCTGCTGTGCTCGT+TGG - tig0024815:50554-50573 Msa1420490:intron 50.0%
GAGTTCGATGCGATGGCGAA+AGG - tig0024815:42997-43016 Msa1420490:intron 55.0%
!! GATGGCGAAAGGATGACGGA+TGG - tig0024815:43008-43027 Msa1420490:intron 55.0%
! GATGGTGTTGAAGTTGGCGG+TGG - tig0024815:43026-43045 Msa1420490:intron 55.0%
!! TAGTAGGTGGTGGTGGGGAA+AGG - tig0024815:43093-43112 Msa1420490:CDS 55.0%
GGTGGCAATGAGGCTGTAGA+TGG - tig0024815:43158-43177 Msa1420490:CDS 55.0%
GGCAATGAGGCTGTAGATGG+TGG - tig0024815:43161-43180 Msa1420490:exon 55.0%
! GATGGTGTTGAAGTTGGCGG+TGG - tig0024815:43026-43045 Msa1420490:intron 55.0%
AGGGCCATGGTTGAAGTTGG+TGG - tig0024815:43314-43333 Msa1420490:five_prime_UTR 55.0%
!! GCCATGGTTGAAGTTGGTGG+CGG - tig0024815:43317-43336 Msa1420490:five_prime_UTR 55.0%
ACCGCCACCAACTTCAACCA+TGG + tig0024815:43321-43340 None:intergenic 55.0%
!! ATGGTTGAAGTTGGTGGCGG+TGG - tig0024815:43320-43339 Msa1420490:five_prime_UTR 55.0%
GGTGGCAATGAGGCTGTAGA+TGG - tig0024815:43158-43177 Msa1420490:CDS 55.0%
GGCAATGAGGCTGTAGATGG+TGG - tig0024815:43161-43180 Msa1420490:exon 55.0%
! GATGGTGTTGAAGTTGGCGG+TGG - tig0024815:43026-43045 Msa1420490:intron 55.0%
!! ATGGTGGTGGCGAAAGGAGA+AGG - tig0024815:43453-43472 Msa1420490:five_prime_UTR 55.0%
!! GATGAAGTTGGTGGCGATGG+CGG - tig0024815:43497-43516 Msa1420490:five_prime_UTR 55.0%
GGCGATGGAGATGTACATGG+TGG - tig0024815:43533-43552 Msa1420490:intron 55.0%
AGTGTCGTGTCAGACACACC+GGG - tig0024815:43667-43686 Msa1420490:intron 55.0%
GTGACGGCCACACCTGATAT+AGG - tig0024815:43904-43923 Msa1420490:five_prime_UTR 55.0%
GGACATCACGGATTTAGCGG+AGG + tig0024815:43946-43965 None:intergenic 55.0%
CCATTGCGACGAGGACATCA+CGG + tig0024815:43958-43977 None:intergenic 55.0%
TGATGTCCTCGTCGCAATGG+CGG - tig0024815:43958-43977 Msa1420490:five_prime_UTR 55.0%
GGCTGTTGAGAGAAGGGAGA+AGG - tig0024815:44413-44432 Msa1420490:five_prime_UTR 55.0%
TGTGCATAGGCCACTCCACT+CGG + tig0024815:45460-45479 None:intergenic 55.0%
GGGTTCTCATCATCTCGGTG+TGG - tig0024815:45802-45821 Msa1420490:five_prime_UTR 55.0%
CAGTCTGAGCATAGCCACGT+TGG + tig0024815:46498-46517 None:intergenic 55.0%
CTCAGACTGCTCAAGCGTGT+GGG - tig0024815:46509-46528 Msa1420490:intron 55.0%
TGGGTCTGTGTCGAAGACAC+TGG - tig0024815:47115-47134 Msa1420490:five_prime_UTR 55.0%
GACCGCCCATTAGTTCAGCT+AGG + tig0024815:47255-47274 None:intergenic 55.0%
CATGGGTTTGTGGAGAGGAC+GGG - tig0024815:47850-47869 Msa1420490:five_prime_UTR 55.0%
AGGACGGGATCTTCAGTGTG+CGG - tig0024815:47865-47884 Msa1420490:five_prime_UTR 55.0%
GATCTTCAGTGTGCGGCAAC+TGG - tig0024815:47872-47891 Msa1420490:five_prime_UTR 55.0%
ACAGGCAAGAAGAGACAGCC+GGG - tig0024815:48060-48079 Msa1420490:intron 55.0%
CCGGGAAAAGAGATGCCTGA+TGG - tig0024815:48078-48097 Msa1420490:intron 55.0%
GTCGAATTCGGGAGATGGAG+AGG - tig0024815:48696-48715 Msa1420490:five_prime_UTR 55.0%
ACGGCGAATGAGGAGACGAA+TGG - tig0024815:48719-48738 Msa1420490:five_prime_UTR 55.0%
TGTGCATAGGCCACTCCACT+CGG + tig0024815:45460-45479 None:intergenic 55.0%
GGGTTCTCATCATCTCGGTG+TGG - tig0024815:45802-45821 Msa1420490:five_prime_UTR 55.0%
!! CATACGGGGACTGGCTTCTA+CGG - tig0024815:50366-50385 Msa1420490:intron 55.0%
!! ATACGGGGACTGGCTTCTAC+GGG - tig0024815:50367-50386 Msa1420490:intron 55.0%
TGTTGTGGGGCATGACGACT+TGG - tig0024815:50393-50412 Msa1420490:intron 55.0%
GGCAGACCCAACCTGAAAGT+TGG - tig0024815:50455-50474 Msa1420490:intron 55.0%
!!! GCTGTGCTCGTTGGCTCTTT+TGG - tig0024815:50563-50582 Msa1420490:intron 55.0%
GTTGAAGTTGGCGGTGGCAC+CGG - tig0024815:43032-43051 Msa1420490:CDS 60.0%
!! CTGAAGGTGGTGGTGGCGAA+AGG - tig0024815:43057-43076 Msa1420490:CDS 60.0%
!! AAGGTGGTGGTGGCGAAAGG+AGG - tig0024815:43060-43079 Msa1420490:CDS 60.0%
!! GTGGTGGTGGGGAAAGGAGA+AGG - tig0024815:43099-43118 Msa1420490:CDS 60.0%
!! AGTTGGTGGCGGTGGCAATG+AGG - tig0024815:43148-43167 Msa1420490:CDS 60.0%
! GGTGTTGAAGTTGGCGGTGG+CGG - tig0024815:43029-43048 Msa1420490:intron 60.0%
! ACCAGAGCTGAAGGTGGTGG+TGG - tig0024815:43230-43249 Msa1420490:five_prime_UTR 60.0%
!! CTGAAGGTGGTGGTGGCGAA+AGG - tig0024815:43057-43076 Msa1420490:CDS 60.0%
!! AAGGTGGTGGTGGCGAAAGG+AGG - tig0024815:43060-43079 Msa1420490:CDS 60.0%
GGTGGCGAAAGGAGGACAGA+TGG - tig0024815:43248-43267 Msa1420490:five_prime_UTR 60.0%
!! AGTTGGTGGCGGTGGCAATG+AGG - tig0024815:43148-43167 Msa1420490:CDS 60.0%
GTTGAAGTTGGCGGTGGCAC+CGG - tig0024815:43032-43051 Msa1420490:CDS 60.0%
!! CTGAAGGTGGTGGAGGGGAA+AGG - tig0024815:43411-43430 Msa1420490:five_prime_UTR 60.0%
!! AAGGTGGTGGAGGGGAAAGG+AGG - tig0024815:43414-43433 Msa1420490:five_prime_UTR 60.0%
! ACGGACACTCCTCGGATTGG+GGG + tig0024815:43696-43715 None:intergenic 60.0%
CACGGACACTCCTCGGATTG+GGG + tig0024815:43697-43716 None:intergenic 60.0%
GCACGGACACTCCTCGGATT+GGG + tig0024815:43698-43717 None:intergenic 60.0%
AGCACGGACACTCCTCGGAT+TGG + tig0024815:43699-43718 None:intergenic 60.0%
CCGTGATGTCCTCGTCGCAA+TGG - tig0024815:43955-43974 Msa1420490:five_prime_UTR 60.0%
CGGCTAGGACCGCTTTCGAA+AGG - tig0024815:45428-45447 Msa1420490:intron 60.0%
! CGGTAGCGGCCTTTCGAAAG+CGG + tig0024815:45440-45459 None:intergenic 60.0%
TTCGAAAGGCCGCTACCGAG+TGG - tig0024815:45442-45461 Msa1420490:five_prime_UTR 60.0%
TAGGCCACTCCACTCGGTAG+CGG + tig0024815:45454-45473 None:intergenic 60.0%
GCTCAGACTGCTCAAGCGTG+TGG - tig0024815:46508-46527 Msa1420490:intron 60.0%
GACTGCTCAAGCGTGTGGGA+AGG - tig0024815:46513-46532 Msa1420490:intron 60.0%
GATGGAGAGGACGGCGAATG+AGG - tig0024815:48709-48728 Msa1420490:five_prime_UTR 60.0%
CGGCTAGGACCGCTTTCGAA+AGG - tig0024815:45428-45447 Msa1420490:intron 60.0%
! CGGTAGCGGCCTTTCGAAAG+CGG + tig0024815:45440-45459 None:intergenic 60.0%
TTCGAAAGGCCGCTACCGAG+TGG - tig0024815:45442-45461 Msa1420490:five_prime_UTR 60.0%
TAGGCCACTCCACTCGGTAG+CGG + tig0024815:45454-45473 None:intergenic 60.0%
TTGGGTCTGCCGGAACGTGT+CGG + tig0024815:50446-50465 None:intergenic 60.0%
! ACCGGAGCTGAAGGTGGTGG+TGG - tig0024815:43050-43069 Msa1420490:CDS 65.0%
GCCACCACCACCTTCAGCTC+CGG + tig0024815:43054-43073 None:intergenic 65.0%
! GTTGAAGTTGGCGGTGGCGG+TGG - tig0024815:43206-43225 Msa1420490:five_prime_UTR 65.0%
GGTGGCACCAGAGCTGAAGG+TGG - tig0024815:43224-43243 Msa1420490:five_prime_UTR 65.0%
GGCACCAGAGCTGAAGGTGG+TGG - tig0024815:43227-43246 Msa1420490:five_prime_UTR 65.0%
GCCACCACCACCTTCAGCTC+TGG + tig0024815:43054-43073 None:intergenic 65.0%
! ACCGGAGCTGAAGGTGGTGG+AGG - tig0024815:43050-43069 Msa1420490:CDS 65.0%
CCCTCCACCACCTTCAGCTC+CGG + tig0024815:43408-43427 None:intergenic 65.0%
!! CCGGAGCTGAAGGTGGTGGA+GGG - tig0024815:43405-43424 Msa1420490:five_prime_UTR 65.0%
!! CGGAGCTGAAGGTGGTGGAG+GGG - tig0024815:43406-43425 Msa1420490:five_prime_UTR 65.0%
GGAGGGGAAAGGAGGACCGA+TGG - tig0024815:43422-43441 Msa1420490:five_prime_UTR 65.0%
!! GTTGGTGGCGATGGCGGTTG+CGG - tig0024815:43503-43522 Msa1420490:intron 65.0%
! GATGGCGGTTGCGGTGGTGT+TGG - tig0024815:43512-43531 Msa1420490:intron 65.0%
!! GGTTGCGGTGGTGTTGGCGA+TGG - tig0024815:43518-43537 Msa1420490:intron 65.0%
!! TCCTCGGATTGGGGGTGTCC+CGG + tig0024815:43688-43707 None:intergenic 65.0%
CCTCGTCGCAATGGCGGTTC+CGG - tig0024815:43964-43983 Msa1420490:five_prime_UTR 65.0%
AAGGCCGCTACCGAGTGGAG+TGG - tig0024815:45447-45466 Msa1420490:five_prime_UTR 65.0%
AAGGCCGCTACCGAGTGGAG+TGG - tig0024815:45447-45466 Msa1420490:five_prime_UTR 65.0%
! GGTGGCACCGGAGCTGAAGG+TGG - tig0024815:43044-43063 Msa1420490:CDS 70.0%
! GGCACCGGAGCTGAAGGTGG+TGG - tig0024815:43047-43066 Msa1420490:CDS 70.0%
GGCGGTGGCACCAGAGCTGA+AGG - tig0024815:43221-43240 Msa1420490:five_prime_UTR 70.0%
! GGTGGCACCGGAGCTGAAGG+TGG - tig0024815:43044-43063 Msa1420490:CDS 70.0%
! GGCACCGGAGCTGAAGGTGG+TGG - tig0024815:43047-43066 Msa1420490:CDS 70.0%
ACCGGGACACCCCCAATCCG+AGG - tig0024815:43684-43703 Msa1420490:intron 70.0%
CCGGAACCGCCATTGCGACG+AGG + tig0024815:43967-43986 None:intergenic 70.0%
! GGCGGTGGCACCGGAGCTGA+AGG - tig0024815:43041-43060 Msa1420490:CDS 75.0%
! GGCGGTGGCACCGGAGCTGA+AGG - tig0024815:43041-43060 Msa1420490:CDS 75.0%
! GGTGGCGATGGCGGTTGCGG+TGG - tig0024815:43506-43525 Msa1420490:intron 75.0%
Chromosome Type Strat End Strand Name
tig0024815 gene 40466 50864 40466 ID=Msa1420490;Name=Msa1420490
tig0024815 mRNA 40466 50864 40466 ID=Msa1420490-mRNA-1;Parent=Msa1420490;Name=Msa1420490-mRNA-1;_AED=0.11;_eAED=0.12;_QI=4341|0.8|0.87|1|0.26|0.18|16|472|271
tig0024815 exon 40466 41027 40466 ID=Msa1420490-mRNA-1:exon:1533;Parent=Msa1420490-mRNA-1
tig0024815 exon 41463 41618 41463 ID=Msa1420490-mRNA-1:exon:1532;Parent=Msa1420490-mRNA-1
tig0024815 exon 41768 41986 41768 ID=Msa1420490-mRNA-1:exon:1531;Parent=Msa1420490-mRNA-1
tig0024815 exon 42447 42648 42447 ID=Msa1420490-mRNA-1:exon:1530;Parent=Msa1420490-mRNA-1
tig0024815 exon 43031 43518 43031 ID=Msa1420490-mRNA-1:exon:1529;Parent=Msa1420490-mRNA-1
tig0024815 exon 43776 44500 43776 ID=Msa1420490-mRNA-1:exon:1528;Parent=Msa1420490-mRNA-1
tig0024815 exon 44662 44874 44662 ID=Msa1420490-mRNA-1:exon:1527;Parent=Msa1420490-mRNA-1
tig0024815 exon 45011 45139 45011 ID=Msa1420490-mRNA-1:exon:1526;Parent=Msa1420490-mRNA-1
tig0024815 exon 45430 45599 45430 ID=Msa1420490-mRNA-1:exon:1525;Parent=Msa1420490-mRNA-1
tig0024815 exon 45692 45921 45692 ID=Msa1420490-mRNA-1:exon:1524;Parent=Msa1420490-mRNA-1
tig0024815 exon 46046 46384 46046 ID=Msa1420490-mRNA-1:exon:1523;Parent=Msa1420490-mRNA-1
tig0024815 exon 47049 47556 47049 ID=Msa1420490-mRNA-1:exon:1522;Parent=Msa1420490-mRNA-1
tig0024815 exon 47728 47913 47728 ID=Msa1420490-mRNA-1:exon:1521;Parent=Msa1420490-mRNA-1
tig0024815 exon 48268 49151 48268 ID=Msa1420490-mRNA-1:exon:1520;Parent=Msa1420490-mRNA-1
tig0024815 exon 49810 50180 49810 ID=Msa1420490-mRNA-1:exon:1519;Parent=Msa1420490-mRNA-1
tig0024815 exon 50618 50864 50618 ID=Msa1420490-mRNA-1:exon:1518;Parent=Msa1420490-mRNA-1
tig0024815 five_prime_UTR 50618 50864 50618 ID=Msa1420490-mRNA-1:five_prime_utr;Parent=Msa1420490-mRNA-1
tig0024815 five_prime_UTR 49810 50180 49810 ID=Msa1420490-mRNA-1:five_prime_utr;Parent=Msa1420490-mRNA-1
tig0024815 five_prime_UTR 48268 49151 48268 ID=Msa1420490-mRNA-1:five_prime_utr;Parent=Msa1420490-mRNA-1
tig0024815 five_prime_UTR 47728 47913 47728 ID=Msa1420490-mRNA-1:five_prime_utr;Parent=Msa1420490-mRNA-1
tig0024815 five_prime_UTR 47049 47556 47049 ID=Msa1420490-mRNA-1:five_prime_utr;Parent=Msa1420490-mRNA-1
tig0024815 five_prime_UTR 46046 46384 46046 ID=Msa1420490-mRNA-1:five_prime_utr;Parent=Msa1420490-mRNA-1
tig0024815 five_prime_UTR 45692 45921 45692 ID=Msa1420490-mRNA-1:five_prime_utr;Parent=Msa1420490-mRNA-1
tig0024815 five_prime_UTR 45430 45599 45430 ID=Msa1420490-mRNA-1:five_prime_utr;Parent=Msa1420490-mRNA-1
tig0024815 five_prime_UTR 45011 45139 45011 ID=Msa1420490-mRNA-1:five_prime_utr;Parent=Msa1420490-mRNA-1
tig0024815 five_prime_UTR 44662 44874 44662 ID=Msa1420490-mRNA-1:five_prime_utr;Parent=Msa1420490-mRNA-1
tig0024815 five_prime_UTR 43776 44500 43776 ID=Msa1420490-mRNA-1:five_prime_utr;Parent=Msa1420490-mRNA-1
tig0024815 five_prime_UTR 43180 43518 43180 ID=Msa1420490-mRNA-1:five_prime_utr;Parent=Msa1420490-mRNA-1
tig0024815 CDS 43031 43179 43031 ID=Msa1420490-mRNA-1:cds;Parent=Msa1420490-mRNA-1
tig0024815 CDS 42447 42648 42447 ID=Msa1420490-mRNA-1:cds;Parent=Msa1420490-mRNA-1
tig0024815 CDS 41768 41986 41768 ID=Msa1420490-mRNA-1:cds;Parent=Msa1420490-mRNA-1
tig0024815 CDS 41463 41618 41463 ID=Msa1420490-mRNA-1:cds;Parent=Msa1420490-mRNA-1
tig0024815 CDS 40938 41027 40938 ID=Msa1420490-mRNA-1:cds;Parent=Msa1420490-mRNA-1
tig0024815 three_prime_UTR 40466 40937 40466 ID=Msa1420490-mRNA-1:three_prime_utr;Parent=Msa1420490-mRNA-1
Gene Sequence

>Msa1420490

ATGTCAATGGAAGTGACTGCAGGTGCCTTGAAAAACTTTGGAGCGGATGTGAAGTGTGCAGACAGCGGCAAAGCTGCTCTTGAAATGCTTCTATTCCCTCACAAGTTTGATGCTTGCTTCAAGGATATTCAAATGCAAGAAAAGGACGGGTTTGAAGCAACTCGTCGAATTCGGGAGATGGAGAGGACGGCGAATGAGGAGACGAATGGTGAATGTAGTGAAAGGAAAAGTAAATTCCGTTTACCTATATTGGCCATGACAGCAGATGTAATCCATGCTACATATGAAGAGTGTTTGAAATGTGGGATGGATGGTTATGTCTCAAAACCTTTTGAGGAAGGAATTGTTCAGATGAAGATGCAAAATCAGCACCACCCTTTGGCTTCAAAGTTACAAGAAACTTTTGCAGAATATGCGGCTAGGACCGCTTTCGAAAGGCCGCTACCGAGTGGAGTGGCCTATGCACAAAGAGTTGTTAACTCGGAAAGAGAGCGGTTTGAGAAGCAGCATAGAGTGGTTATAAAGACAATGGAAAGAGAGGCTTCACAGGTTAGGGATGAGTATGCACCGGATGACCGAGAAAACATACTGAGAGCTCCTACTGGGAAGTTTGTTCCGACTAGCCCTTTTAGGTTGTTGGGTTCTCATCATCTCGGTGTGGTTTTAACATTTCCTGTTTACAAATTTAAGCTCCCTCCCAACCCAACAACAGAAGAGCTCATTAAAGGAAACATTGCTGAAGGTGCACTTTTAACCGACTTTTTGATGGCCAGAATGCGGAGTTTAGCACATACGGGGACTGGCTTCTACGGGTAA
Protein sequence

>Msa1420490

MSMEVTAGALKNFGADVKCADSGKAALEMLLFPHKFDACFKDIQMQEKDGFEATRRIREMERTANEETNGECSERKSKFRLPILAMTADVIHATYEECLKCGMDGYVSKPFEEGIVQMKMQNQHHPLASKLQETFAEYAARTAFERPLPSGVAYAQRVVNSERERFEKQHRVVIKTMEREASQVRDEYAPDDRENILRAPTGKFVPTSPFRLLGSHHLGVVLTFPVYKFKLPPNPTTEELIKGNIAEGALLTDFLMARMRSLAHTGTGFYG*