AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1440370

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1440370 MtrunA17_Chr8g0392301 91.743 109 9 0 5 113 875 983 2.14e-63 214
Msa1440370 MtrunA17_Chr8g0392301 75.188 133 12 2 132 243 116 248 2.39e-54 189
Msa1440370 MtrunA17_Chr8g0377481 63.889 108 32 1 5 112 855 955 6.90e-39 144
Msa1440370 MtrunA17_Chr8g0377481 45.638 149 44 3 132 243 111 259 3.33e-27 110
Msa1440370 MtrunA17_Chr3g0122391 62.037 108 33 1 5 112 913 1012 3.46e-36 136
Msa1440370 MtrunA17_Chr3g0122391 47.297 148 41 3 132 242 159 306 4.80e-28 113
Msa1440370 MtrunA17_Chr5g0447641 56.410 117 42 2 4 113 1087 1201 4.09e-34 130
Msa1440370 MtrunA17_Chr5g0447641 45.223 157 50 4 125 246 332 487 2.78e-29 116
Msa1440370 MtrunA17_Chr2g0311191 67.442 86 18 3 174 258 22 98 4.64e-26 102
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1440370 AT2G01830.5 65.909 132 23 3 132 241 193 324 3.06e-43 157
Msa1440370 AT2G01830.5 68.807 109 27 1 5 113 948 1049 2.13e-42 155
Msa1440370 AT2G01830.1 65.909 132 23 3 132 241 181 312 3.45e-43 157
Msa1440370 AT2G01830.1 68.807 109 27 1 5 113 936 1037 2.18e-42 155
Msa1440370 AT2G01830.4 65.909 132 23 3 132 241 181 312 3.45e-43 157
Msa1440370 AT2G01830.4 68.807 109 27 1 5 113 936 1037 2.18e-42 155
Msa1440370 AT2G01830.6 65.909 132 23 3 132 241 181 312 3.45e-43 157
Msa1440370 AT2G01830.6 68.807 109 27 1 5 113 936 1037 2.18e-42 155
Msa1440370 AT2G01830.3 65.909 132 23 3 132 241 181 312 3.45e-43 157
Msa1440370 AT2G01830.3 68.807 109 27 1 5 113 936 1037 2.18e-42 155
Msa1440370 AT2G01830.2 65.909 132 23 3 132 241 204 335 3.90e-43 157
Msa1440370 AT2G01830.2 68.807 109 27 1 5 113 959 1060 2.32e-42 155
Msa1440370 AT1G27320.1 63.248 117 38 2 1 112 900 1016 9.34e-42 153
Msa1440370 AT1G27320.1 43.624 149 47 3 132 243 169 317 3.43e-25 105
Msa1440370 AT5G35750.1 63.248 117 38 2 5 116 1049 1165 6.82e-41 150
Msa1440370 AT5G35750.1 48.000 150 43 3 132 246 308 457 2.08e-30 120

Find 370 sgRNAs with CRISPR-Local

Find 719 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GATCTGCACCTTTCTCTTTC+TGG 0.090871 tig0029079:+24859 None:intergenic
CCTTGAGCTGTCTAGAAATT+TGG 0.120024 tig0029079:-27685 Msa1440370:five_prime_UTR
ACCTTCTTCACCTCAGTTAT+TGG 0.154797 tig0029079:+21616 None:intergenic
CATTATTAAGTTTGTACTTT+TGG 0.162606 tig0029079:-26561 Msa1440370:five_prime_UTR
TAAATTCCGTTTACCTATAT+TGG 0.165693 tig0029079:-20206 Msa1440370:CDS
ACACTGCCAGTTATGAATTT+TGG 0.177356 tig0029079:+22396 None:intergenic
AGCTACTGGTAAAGCATTTC+TGG 0.184947 tig0029079:-23208 Msa1440370:five_prime_UTR
GCTGTGCTCGTTGGCTCTTT+TGG 0.262041 tig0029079:-18406 Msa1440370:three_prime_UTR
AGCTTGCCTTCAGCAAGTTT+TGG 0.267697 tig0029079:-20933 Msa1440370:five_prime_UTR
TGAGAACCCAACAACCTAAA+AGG 0.270552 tig0029079:+19203 None:intergenic
TGAGAACCCAACAACCTAAA+AGG 0.270552 tig0029079:+23180 None:intergenic
TTGAAGCAACTCGTCGAATT+CGG 0.272691 tig0029079:-20285 Msa1440370:CDS
AGTGAGAAGGAAAGAGGTTT+TGG 0.273718 tig0029079:-23814 Msa1440370:five_prime_UTR
AATAAATTTATCGGGCCTTT+TGG 0.277715 tig0029079:-18481 Msa1440370:three_prime_UTR
TCCAATCTGAAGCTCGAAAA+TGG 0.279042 tig0029079:-28422 Msa1440370:five_prime_UTR
AGCTCTTCTGTTGTTGGGTT+GGG 0.283441 tig0029079:+19131 None:intergenic
ATTGGTTGCCATACATGATT+AGG 0.284727 tig0029079:+22680 None:intergenic
AAGAATATTGTTCTTATAGA+AGG 0.285105 tig0029079:-26264 Msa1440370:five_prime_UTR
TCTGATTAAGATTAATGTTA+TGG 0.285743 tig0029079:-22368 Msa1440370:five_prime_UTR
CTAAGCGCGAGACTAATATT+TGG 0.289326 tig0029079:-18440 Msa1440370:three_prime_UTR
AGCTGGAGATATCAAGAAAT+TGG 0.296400 tig0029079:-25176 Msa1440370:five_prime_UTR
CAAAAGTACAAACTTAATAA+TGG 0.297310 tig0029079:+26562 None:intergenic
TGAATGCTTGGATATCTATT+AGG 0.305363 tig0029079:+26033 None:intergenic
AAAACTCTTCATCAGCAATT+AGG 0.316824 tig0029079:+21936 None:intergenic
TGAAGCAACTCGTCGAATTC+GGG 0.321951 tig0029079:-20284 Msa1440370:CDS
AAGGCATGAAAATTCTATCT+TGG 0.329216 tig0029079:+21809 None:intergenic
CCATTATCTCTTTCCTATAC+AGG 0.329932 tig0029079:-24789 Msa1440370:five_prime_UTR
GTCAAAATAAATAAATTTAT+CGG 0.334602 tig0029079:-18490 Msa1440370:three_prime_UTR
GTAACAAAGCACATATAAAA+AGG 0.337845 tig0029079:-24905 Msa1440370:five_prime_UTR
CTGATTAAGATTAATGTTAT+GGG 0.339688 tig0029079:-22367 Msa1440370:five_prime_UTR
GAGTGCAGAAGTAATGTAAA+AGG 0.340817 tig0029079:-25092 Msa1440370:five_prime_UTR
GGCTTTAAACCCTCTAAAAC+TGG 0.340964 tig0029079:+21573 None:intergenic
GTGTTAGCTGGTGTTGTAAT+GGG 0.347004 tig0029079:-24029 Msa1440370:intron
GATTTCCAATGATCGGCATT+GGG 0.348809 tig0029079:+18146 None:intergenic
AGCTCTTATGTTGTTGGGTT+GGG 0.355867 tig0029079:+23108 None:intergenic
TAGAAAATAGAGGTTTATAG+AGG 0.356406 tig0029079:+26174 None:intergenic
ATCTAGACTCCGACACGTTC+CGG 0.356468 tig0029079:-18535 Msa1440370:three_prime_UTR
ATGTGCTAAACTCCGCATTC+TGG 0.359839 tig0029079:+18623 None:intergenic
CTCTGAATCTGAACAGTCTT+AGG 0.361731 tig0029079:+27777 None:intergenic
CAAGTTTGATGCTTGCTTCA+AGG 0.362213 tig0029079:-20716 Msa1440370:CDS
CTAACAACCCTCTTACTCAT+TGG 0.363261 tig0029079:-24752 Msa1440370:five_prime_UTR
TGGAAATCAAAATTTATTGA+TGG 0.364877 tig0029079:-18131 Msa1440370:three_prime_UTR
GGGAGCTTAAATTTGTAAAC+AGG 0.365651 tig0029079:+19155 None:intergenic
GGGAGCTTAAATTTGTAAAC+AGG 0.365651 tig0029079:+23132 None:intergenic
AAACATCACCTTCTTTGTAT+TGG 0.366658 tig0029079:+22662 None:intergenic
CCTCGTCGCAATGGCGGTTC+CGG 0.368561 tig0029079:-25005 Msa1440370:five_prime_UTR
TATCCGTGTATCAGTCTATA+TGG 0.368758 tig0029079:-27621 Msa1440370:five_prime_UTR
TAATGAGCTCTTATGTTGTT+GGG 0.369742 tig0029079:+23103 None:intergenic
TTAATGAGCTCTTCTGTTGT+TGG 0.370178 tig0029079:+19125 None:intergenic
CTTAGGCCACTTGTCGAATC+TGG 0.370934 tig0029079:+27794 None:intergenic
TCTAATCCTATTTGATCTCC+TGG 0.371886 tig0029079:+25993 None:intergenic
AATTTACTTGGTCAACTTGC+TGG 0.372381 tig0029079:-22737 Msa1440370:five_prime_UTR
AACTTTCAGGTTGGGTCTGC+CGG 0.373589 tig0029079:+18516 None:intergenic
TTTAAAGCCGTTGTGGTTGA+TGG 0.373929 tig0029079:-21559 Msa1440370:five_prime_UTR
TTGACTCCAACTTTCAGGTT+GGG 0.377248 tig0029079:+18508 None:intergenic
AGTCGCAAACGCCATCAATA+AGG 0.379169 tig0029079:-21476 Msa1440370:five_prime_UTR
TTATTGCATCTACAGCAAAA+TGG 0.379494 tig0029079:-23850 Msa1440370:five_prime_UTR
GATCTTCAGTGTGCGGCAAC+TGG 0.379917 tig0029079:-21096 Msa1440370:five_prime_UTR
GAAACAATGTTTACCTGTAT+AGG 0.381243 tig0029079:+24776 None:intergenic
TAATGAGCTCTTCTGTTGTT+GGG 0.382581 tig0029079:+19126 None:intergenic
GCATGACGACTTGGATTTCA+TGG 0.383364 tig0029079:-18567 Msa1440370:three_prime_UTR
TTAATGAGCTCTTATGTTGT+TGG 0.383934 tig0029079:+23102 None:intergenic
TTGGTTGCCATACATGATTA+GGG 0.384098 tig0029079:+22681 None:intergenic
CTAGTCACAGCAGCTCTAAC+AGG 0.385909 tig0029079:+21532 None:intergenic
TCAAGCTTTCCATTTGTTGC+GGG 0.386642 tig0029079:+22084 None:intergenic
ATTTAATGGACCACACACTA+TGG 0.386966 tig0029079:-26403 Msa1440370:five_prime_UTR
TTTCACTTCGCAAATTTCAT+TGG 0.387078 tig0029079:-28343 Msa1440370:five_prime_UTR
AAAGAGAGGCTTCACAGGTT+AGG 0.389296 tig0029079:-19444 Msa1440370:CDS
AAAGAGAGGCTTCACAGGTT+AGG 0.389296 tig0029079:-23426 Msa1440370:five_prime_UTR
AACTTGTTGATGCTTCAATA+TGG 0.391748 tig0029079:+26093 None:intergenic
GAAAACCCAGGAGATCAAAT+AGG 0.395401 tig0029079:-25999 Msa1440370:five_prime_UTR
GCTACAAATTCAATTAATAA+AGG 0.396305 tig0029079:+26213 None:intergenic
TCTGCTGTCATGGCCAATAT+AGG 0.397938 tig0029079:+20193 None:intergenic
GAGTCTGAAAGGAGATTAAA+CGG 0.402628 tig0029079:+28501 None:intergenic
TTATGAACAAGTCACCTAGA+TGG 0.407870 tig0029079:-21873 Msa1440370:five_prime_UTR
CTTCTGTTGTTGGGTTGGGA+GGG 0.408038 tig0029079:+19135 None:intergenic
TGAACAATTCCTTCCTCAAA+AGG 0.408776 tig0029079:+20109 None:intergenic
TGGGTAGTCTTTGTGATCAA+AGG 0.412517 tig0029079:-23794 Msa1440370:five_prime_UTR
TAAGTGCCTAGCTGAACTAA+TGG 0.413074 tig0029079:-21722 Msa1440370:five_prime_UTR
AACTCGACTTCTAGAAACTA+TGG 0.415251 tig0029079:-21772 Msa1440370:five_prime_UTR
TGTGTCGAAGACACTGGAAT+TGG 0.420012 tig0029079:-21847 Msa1440370:five_prime_UTR
CACAGAACCCAATGAGTAAG+AGG 0.421143 tig0029079:+24744 None:intergenic
GTTGCTTTGTATTCTTCTGA+TGG 0.422242 tig0029079:-23883 Msa1440370:five_prime_UTR
CTCAAGCTTTCCATTTGTTG+CGG 0.424158 tig0029079:+22083 None:intergenic
ACCGAGCCAAAATTCATAAC+TGG 0.425503 tig0029079:-22402 Msa1440370:five_prime_UTR
AACTATGGTGGTACCGGCAT+TGG 0.427397 tig0029079:-21757 Msa1440370:five_prime_UTR
TAACAACCCTCTTACTCATT+GGG 0.429622 tig0029079:-24751 Msa1440370:five_prime_UTR
TGAAATTTGCGAAGTGAAAA+CGG 0.429932 tig0029079:+28347 None:intergenic
CCAATCGGATATTGAATGCT+TGG 0.430148 tig0029079:+26021 None:intergenic
AAAACCCCAATGCCGATCAT+TGG 0.430396 tig0029079:-18151 Msa1440370:three_prime_UTR
CCTGTATAGGAAAGAGATAA+TGG 0.430433 tig0029079:+24789 None:intergenic
CTGAAGGTGGTGGAGGGGAA+AGG 0.432104 tig0029079:-25558 Msa1440370:intron
ACCGGAGCTGAAGGTGGTGG+AGG 0.432907 tig0029079:-25565 Msa1440370:intron
TTTATAAGCCGGCCACAGAT+TGG 0.433400 tig0029079:-21685 Msa1440370:five_prime_UTR
AGGCATGAAAATTCTATCTT+GGG 0.434654 tig0029079:+21810 None:intergenic
GAGCTCTTCTGTTGTTGGGT+TGG 0.436168 tig0029079:+19130 None:intergenic
AAGAGAGGCTTCACAGGTTA+GGG 0.436592 tig0029079:-19443 Msa1440370:CDS
AAGAGAGGCTTCACAGGTTA+GGG 0.436592 tig0029079:-23425 Msa1440370:five_prime_UTR
GGCTTCTACGGGTAATGTTG+TGG 0.441520 tig0029079:-18591 Msa1440370:exon
AGTGTTAGCTGGTGTTGTAA+TGG 0.441960 tig0029079:-24030 Msa1440370:intron
TTAATTGGAGGTAGTTATGT+TGG 0.442968 tig0029079:-22791 Msa1440370:intron
TTTCAACATTTAGCATGTAC+TGG 0.443851 tig0029079:-27509 Msa1440370:five_prime_UTR
TATCAGTCTATATGGTTTGT+AGG 0.444423 tig0029079:-27613 Msa1440370:five_prime_UTR
AGCGGTCCTAGCCGTATATT+CGG 0.445484 tig0029079:+23549 None:intergenic
GTTGGTGGCGATGGCGGTTG+CGG 0.446160 tig0029079:-25466 Msa1440370:five_prime_UTR
AATAGAAAGCCCGCAACAAA+TGG 0.447886 tig0029079:-22093 Msa1440370:five_prime_UTR
GCTTCTACGGGTAATGTTGT+GGG 0.449565 tig0029079:-18590 Msa1440370:exon
TCCCTTGTGGAAAATTTACT+TGG 0.449628 tig0029079:-22749 Msa1440370:five_prime_UTR
TCTTCTGTTGTTGGGTTGGG+AGG 0.450263 tig0029079:+19134 None:intergenic
GCCACCACCACCTTCAGCTC+CGG 0.450368 tig0029079:+25918 None:intergenic
TGATTTCCAATGATCGGCAT+TGG 0.452162 tig0029079:+18145 None:intergenic
CAAAGAAACAGCCTTATTGA+TGG 0.453163 tig0029079:+21465 None:intergenic
TAAGCGCGAGACTAATATTT+GGG 0.454578 tig0029079:-18439 Msa1440370:three_prime_UTR
GAAGAAGTTGTGCATACATC+TGG 0.454754 tig0029079:-22039 Msa1440370:five_prime_UTR
GGATATTCAAATGCAAGAAA+AGG 0.455195 tig0029079:-20695 Msa1440370:CDS
CATACGGGGACTGGCTTCTA+CGG 0.455310 tig0029079:-18603 Msa1440370:CDS
ACTTGAACCTTCAGCTGAAA+AGG 0.457162 tig0029079:+26119 None:intergenic
AGATGTATGCACAACTTCTT+CGG 0.457816 tig0029079:+22041 None:intergenic
TCAAAATAAATAAATTTATC+GGG 0.458085 tig0029079:-18489 Msa1440370:three_prime_UTR
TTCAAAGTTCCAAGAACAAA+CGG 0.459844 tig0029079:-23961 Msa1440370:five_prime_UTR
GGGTAGTCTTTGTGATCAAA+GGG 0.462700 tig0029079:-23793 Msa1440370:five_prime_UTR
TCCAATAACTGAGGTGAAGA+AGG 0.463469 tig0029079:-21617 Msa1440370:five_prime_UTR
TCAAAGTTCCAAGAACAAAC+GGG 0.463568 tig0029079:-23960 Msa1440370:five_prime_UTR
AATAAGGCTGTTTCTTTGTG+TGG 0.465190 tig0029079:-21460 Msa1440370:five_prime_UTR
GCAAAATCAGCACCACCCTT+TGG 0.468680 tig0029079:-19617 Msa1440370:CDS
GCAAAATCAGCACCACCCTT+TGG 0.468680 tig0029079:-23985 Msa1440370:five_prime_UTR
TCTTATGTTGTTGGGTTGGG+AGG 0.468813 tig0029079:+23111 None:intergenic
GTGACGGCCACACCTGATAT+AGG 0.469948 tig0029079:-25065 Msa1440370:five_prime_UTR
CTTATGTTGTTGGGTTGGGA+GGG 0.470141 tig0029079:+23112 None:intergenic
ATGGATGAAGTTGGTGGCGA+TGG 0.473168 tig0029079:-25475 Msa1440370:five_prime_UTR
GTCAAATAAACTTTATAAGC+CGG 0.473292 tig0029079:-21696 Msa1440370:five_prime_UTR
CTTGGAACTTTGAAGCCAAA+GGG 0.475089 tig0029079:+23970 None:intergenic
TTTGACTCCAACTTTCAGGT+TGG 0.476261 tig0029079:+18507 None:intergenic
CAGAAGTAATGTAAAAGGTA+AGG 0.479588 tig0029079:-25087 Msa1440370:five_prime_UTR
GAGCTCTTATGTTGTTGGGT+TGG 0.479818 tig0029079:+23107 None:intergenic
AACATACTGAGAGCTCCTAC+TGG 0.482031 tig0029079:-19245 Msa1440370:CDS
AGATACCATTTGAAGAGACT+TGG 0.482768 tig0029079:-21511 Msa1440370:five_prime_UTR
ACTGATCCCCTAATCATGTA+TGG 0.483235 tig0029079:-22688 Msa1440370:five_prime_UTR
AGGACCGATGGAGTTGTAGA+TGG 0.484578 tig0029079:-25535 Msa1440370:five_prime_UTR
ACTATTGCTGCTGTGCTCGT+TGG 0.485368 tig0029079:-18415 Msa1440370:three_prime_UTR
CATGGGTTTGTGGAGAGGAC+GGG 0.486989 tig0029079:-21118 Msa1440370:five_prime_UTR
AGACGAACAAACTACCAATC+TGG 0.488070 tig0029079:-24835 Msa1440370:five_prime_UTR
TCTTCGACACAGACCCATCT+AGG 0.488222 tig0029079:+21859 None:intergenic
AAAATCCGCGGTAAATGAAA+AGG 0.489053 tig0029079:+21657 None:intergenic
CGAGTTAACTCTTTGTGCAT+AGG 0.489096 tig0029079:+23498 None:intergenic
TATGAACAAGTCACCTAGAT+GGG 0.489195 tig0029079:-21872 Msa1440370:five_prime_UTR
ATAAGGCTGTTTCTTTGTGT+GGG 0.489234 tig0029079:-21459 Msa1440370:five_prime_UTR
GAGTTATCTGCCTTCACAAA+AGG 0.489687 tig0029079:+21790 None:intergenic
TTGTAGATGGTGGTGGCGAA+AGG 0.493499 tig0029079:-25522 Msa1440370:five_prime_UTR
GAGAACCCAACAACCTAAAA+GGG 0.497618 tig0029079:+19204 None:intergenic
GAGAACCCAACAACCTAAAA+GGG 0.497618 tig0029079:+23181 None:intergenic
CCGGAGCTGAAGGTGGTGGA+GGG 0.497991 tig0029079:-25564 Msa1440370:intron
GTTGAAGTTGGCGGTGGCAC+CGG 0.498250 tig0029079:-25937 Msa1440370:five_prime_UTR
GTATCCCAAGTCTCTTCAAA+TGG 0.499078 tig0029079:+21506 None:intergenic
AAGTGCCTAGCTGAACTAAT+GGG 0.499182 tig0029079:-21721 Msa1440370:five_prime_UTR
TCATGGCCAATATAGGTAAA+CGG 0.499301 tig0029079:+20200 None:intergenic
TCTGAAAATATCACGCCAAA+AGG 0.500549 tig0029079:+18466 None:intergenic
CATCTAAAATGAGTTAAAGA+TGG 0.501537 tig0029079:+18212 None:intergenic
TTCAGATTCAGAGGAAGAAG+AGG 0.501652 tig0029079:-27767 Msa1440370:five_prime_UTR
TCTTGTAACTTTGAAGCCAA+AGG 0.501836 tig0029079:+19601 None:intergenic
GAGTTCGATGCGATGGCGAA+AGG 0.502422 tig0029079:-25972 Msa1440370:five_prime_UTR
TAAGAATATCTAGAAAATAG+AGG 0.503004 tig0029079:+26164 None:intergenic
AAGCTTGAGACTTATCGAAA+TGG 0.503401 tig0029079:-22069 Msa1440370:five_prime_UTR
AATGGAAAGAGAGGCTTCAC+AGG 0.503470 tig0029079:-19449 Msa1440370:CDS
AATGGAAAGAGAGGCTTCAC+AGG 0.503470 tig0029079:-23431 Msa1440370:five_prime_UTR
GGCGGTGGCACCGGAGCTGA+AGG 0.503621 tig0029079:-25928 Msa1440370:intron
CTTGTAACTTTGAAGCCAAA+GGG 0.504290 tig0029079:+19602 None:intergenic
TACTAAAGTGAGAAGGAAAG+AGG 0.504630 tig0029079:-23820 Msa1440370:five_prime_UTR
CTAATCCTATTTGATCTCCT+GGG 0.505911 tig0029079:+25994 None:intergenic
TTAAAGCCGTTGTGGTTGAT+GGG 0.511535 tig0029079:-21558 Msa1440370:five_prime_UTR
GGCAGACCCAACCTGAAAGT+TGG 0.512293 tig0029079:-18514 Msa1440370:three_prime_UTR
ATTGGAGGTAGTTATGTTGG+AGG 0.513150 tig0029079:-22788 Msa1440370:intron
TGAGCTATCTTGATGGATGT+AGG 0.513496 tig0029079:-26674 Msa1440370:five_prime_UTR
GATGGCGGTTGCGGTGGTGT+TGG 0.513633 tig0029079:-25457 Msa1440370:five_prime_UTR
AATGCGGAGTTTAGCACATA+CGG 0.514945 tig0029079:-18619 Msa1440370:CDS
TGCACCTGTCACATTTGCTC+AGG 0.517781 tig0029079:-23395 Msa1440370:five_prime_UTR
AGTTTAGCACATACGGGGAC+TGG 0.518029 tig0029079:-18612 Msa1440370:CDS
TTAACATGGTTTAATCATTG+AGG 0.522179 tig0029079:+26777 None:intergenic
TCATGGGTTTGTGGAGAGGA+CGG 0.522273 tig0029079:-21119 Msa1440370:five_prime_UTR
ATGAAGAGTGTTTGAAATGT+GGG 0.523905 tig0029079:-20153 Msa1440370:CDS
AACACTCTTCATATGTAGCA+TGG 0.525664 tig0029079:+20164 None:intergenic
GAAGCCACTGAGAACTAGTA+TGG 0.525821 tig0029079:-20960 Msa1440370:five_prime_UTR
GGAGGGGAAAGGAGGACCGA+TGG 0.526035 tig0029079:-25547 Msa1440370:five_prime_UTR
ATAATGATAGCTAGAGCTAC+TGG 0.526297 tig0029079:-23222 Msa1440370:five_prime_UTR
TTTAAAGACAATGGAAAGAG+AGG 0.526312 tig0029079:-23440 Msa1440370:five_prime_UTR
TTCAAATGCAAGAAAAGGAC+GGG 0.526629 tig0029079:-20690 Msa1440370:intron
GGAGATGTACATGGTGGTTG+TGG 0.527779 tig0029079:-25430 Msa1440370:five_prime_UTR
GATGGAGAGGACGGCGAATG+AGG 0.528403 tig0029079:-20260 Msa1440370:CDS
GAGCTATCTTGATGGATGTA+GGG 0.529146 tig0029079:-26673 Msa1440370:five_prime_UTR
CAAATTGTAACAAATCTAGT+TGG 0.529505 tig0029079:-22335 Msa1440370:five_prime_UTR
ATGGATTACATCTGCTGTCA+TGG 0.530208 tig0029079:+20183 None:intergenic
CTATTGATATGATGTCTTGA+GGG 0.530839 tig0029079:-23351 Msa1440370:intron
AATCTAGTCCAGAAAGAGAA+AGG 0.531970 tig0029079:-24867 Msa1440370:five_prime_UTR
CCAAATTTCTAGACAGCTCA+AGG 0.532517 tig0029079:+27685 None:intergenic
CAAACTGAAGTTGAACCATC+AGG 0.532569 tig0029079:+20875 None:intergenic
AACAGGCAAGAAGAGACAGC+CGG 0.534721 tig0029079:-20909 Msa1440370:five_prime_UTR
CATCTACAGCAAAATGGATG+TGG 0.534726 tig0029079:-23844 Msa1440370:five_prime_UTR
TCAAGCACAAACCTGGTCAA+TGG 0.535029 tig0029079:+23694 None:intergenic
AAACCCTTCTGCCATTGACC+AGG 0.535215 tig0029079:-23705 Msa1440370:intron
GTTTCCTGAGCAAATGTGAC+AGG 0.535330 tig0029079:+23391 None:intergenic
TCATTCAAGCACATAGAGCC+CGG 0.535674 tig0029079:-23920 Msa1440370:five_prime_UTR
AGTCTGAGCATAGCCACGTT+GGG 0.538627 tig0029079:+22474 None:intergenic
AACTCGTCGAATTCGGGAGA+TGG 0.539466 tig0029079:-20278 Msa1440370:CDS
TGTAATCTCAAAACGCTAAG+TGG 0.539973 tig0029079:-22012 Msa1440370:five_prime_UTR
TCTTGGAACTTTGAAGCCAA+AGG 0.542220 tig0029079:+23969 None:intergenic
GGTTGCGGTGGTGTTGGCGA+TGG 0.542582 tig0029079:-25451 Msa1440370:five_prime_UTR
TGTTGTGGGGCATGACGACT+TGG 0.542613 tig0029079:-18576 Msa1440370:three_prime_UTR
TAGCTATCATTATGTTCTCT+CGG 0.543918 tig0029079:+23232 None:intergenic
TGTTTGAAATGTGGGATGGA+TGG 0.544805 tig0029079:-20145 Msa1440370:CDS
CTGTTCCCAAAACTTGCTGA+AGG 0.546763 tig0029079:+20927 None:intergenic
CGAGGACATCACGGATTTAG+CGG 0.548208 tig0029079:+25023 None:intergenic
TTGTTGGGTTCTCATCATCT+CGG 0.549046 tig0029079:-19194 Msa1440370:CDS
TTGTTGGGTTCTCATCATCT+CGG 0.549046 tig0029079:-23171 Msa1440370:five_prime_UTR
CGAGCTTCAGATTGGAAGAG+CGG 0.549147 tig0029079:+28429 None:intergenic
AGAAAATAGAGGTTTATAGA+GGG 0.552867 tig0029079:+26175 None:intergenic
ATCAGGGCAATGGATGAAGT+TGG 0.554409 tig0029079:-25484 Msa1440370:five_prime_UTR
GGAAGCTATTCGAGAAGAAG+AGG 0.554823 tig0029079:-27824 Msa1440370:intron
GTTAACAACTCTTTGTGCAT+AGG 0.556014 tig0029079:+19519 None:intergenic
GAGAAAGATTCATGGGTTTG+TGG 0.557247 tig0029079:-21128 Msa1440370:five_prime_UTR
GAGCTCATTAAAGCGACCAC+AGG 0.557353 tig0029079:-23090 Msa1440370:five_prime_UTR
CTATGCACAAAGAGTTAACT+CGG 0.558471 tig0029079:-23497 Msa1440370:five_prime_UTR
AGGTACTTCCAATCTGTGGC+CGG 0.558714 tig0029079:+21677 None:intergenic
TGTTGGAGGATCCTTTGATG+TGG 0.558720 tig0029079:-22774 Msa1440370:five_prime_UTR
CAGAGAAGAGAGCTAAAGAT+CGG 0.559209 tig0029079:+28378 None:intergenic
AGATTCATGGGTTTGTGGAG+AGG 0.561266 tig0029079:-21123 Msa1440370:five_prime_UTR
TATGGCAACCAATACAAAGA+AGG 0.561778 tig0029079:-22670 Msa1440370:intron
CCAAGCATTCAATATCCGAT+TGG 0.562018 tig0029079:-26021 Msa1440370:five_prime_UTR
TAGGCCACTCCACTCGGTAG+CGG 0.563486 tig0029079:+19538 None:intergenic
TAGGCCACTCCACTCGGTAG+CGG 0.563486 tig0029079:+23517 None:intergenic
GATACCATTTGAAGAGACTT+GGG 0.564437 tig0029079:-21510 Msa1440370:five_prime_UTR
ATACGGGGACTGGCTTCTAC+GGG 0.565321 tig0029079:-18602 Msa1440370:CDS
ACTGATACTCAAACCAATGC+CGG 0.566091 tig0029079:+21744 None:intergenic
TATGAAGAGTGTTTGAAATG+TGG 0.566182 tig0029079:-20154 Msa1440370:CDS
CGGAGCTGAAGGTGGTGGAG+GGG 0.566193 tig0029079:-25563 Msa1440370:intron
TCTAGAAACTATGGTGGTAC+CGG 0.567665 tig0029079:-21763 Msa1440370:five_prime_UTR
AGTCTGAAAGGAGATTAAAC+GGG 0.569635 tig0029079:+28502 None:intergenic
ATGACGGATGGTGTTGAAGT+TGG 0.569733 tig0029079:-25949 Msa1440370:five_prime_UTR
TGTGCATAGGCCACTCCACT+CGG 0.569929 tig0029079:+19532 None:intergenic
TGTGCATAGGCCACTCCACT+CGG 0.569929 tig0029079:+23511 None:intergenic
ATGGTGGTGGCGAAAGGAGA+AGG 0.570011 tig0029079:-25516 Msa1440370:five_prime_UTR
ACGGATGGTGTTGAAGTTGG+CGG 0.570486 tig0029079:-25946 Msa1440370:five_prime_UTR
TACTAATATTCGTAGCAAGA+AGG 0.570683 tig0029079:+21035 None:intergenic
ACAGGCAAGAAGAGACAGCC+GGG 0.572058 tig0029079:-20908 Msa1440370:five_prime_UTR
CTTTGATGTGGAGTCCCTTG+TGG 0.572959 tig0029079:-22762 Msa1440370:five_prime_UTR
CACAAGGGACTCCACATCAA+AGG 0.573882 tig0029079:+22763 None:intergenic
CCGTGATGTCCTCGTCGCAA+TGG 0.574492 tig0029079:-25014 Msa1440370:five_prime_UTR
GGTGGCGATGGCGGTTGCGG+TGG 0.575133 tig0029079:-25463 Msa1440370:five_prime_UTR
AGGATTAGAGTTCGATGCGA+TGG 0.575134 tig0029079:-25979 Msa1440370:five_prime_UTR
TATAAAGACAATGGAAAGAG+AGG 0.575171 tig0029079:-19458 Msa1440370:CDS
TAGAGGGTTTAAAGCCGTTG+TGG 0.575392 tig0029079:-21566 Msa1440370:five_prime_UTR
ATGCGGAGTTTAGCACATAC+GGG 0.576002 tig0029079:-18618 Msa1440370:CDS
GCAGAAGGGTTTCTGTAGGA+TGG 0.576930 tig0029079:+23716 None:intergenic
GACTGCTCAAGCGTGTGGGA+AGG 0.578235 tig0029079:-22455 Msa1440370:five_prime_UTR
CTCAGACTGCTCAAGCGTGT+GGG 0.579543 tig0029079:-22459 Msa1440370:five_prime_UTR
CTAAGACTGTTCAGATTCAG+AGG 0.581573 tig0029079:-27776 Msa1440370:five_prime_UTR
TAGAGTGGTTATAAAGACAA+TGG 0.582498 tig0029079:-19467 Msa1440370:CDS
TATTGTTCTTATAGAAGGTG+AGG 0.583167 tig0029079:-26259 Msa1440370:five_prime_UTR
CAAACCTGGTCAATGGCAGA+AGG 0.584600 tig0029079:+23701 None:intergenic
AAGGTGGTGGAGGGGAAAGG+AGG 0.586200 tig0029079:-25555 Msa1440370:five_prime_UTR
CGAATGGTGAATGTAGTGAA+AGG 0.586436 tig0029079:-20234 Msa1440370:CDS
ATAACTGAAACTAAATCGAT+CGG 0.586558 tig0029079:+24973 None:intergenic
TTGGGTCTGCCGGAACGTGT+CGG 0.588603 tig0029079:+18526 None:intergenic
CGGCTAGGACCGCTTTCGAA+AGG 0.588844 tig0029079:-19561 Msa1440370:CDS
CGGTAGCGGCCTTTCGAAAG+CGG 0.589335 tig0029079:+19552 None:intergenic
CGGTAGCGGCCTTTCGAAAG+CGG 0.589335 tig0029079:+23531 None:intergenic
TGGGTCTGTGTCGAAGACAC+TGG 0.590108 tig0029079:-21853 Msa1440370:five_prime_UTR
CCACTGAGAACTAGTATGGT+GGG 0.590558 tig0029079:-20956 Msa1440370:five_prime_UTR
CAATGGAGAAAGAGTCTGAA+AGG 0.590894 tig0029079:+28490 None:intergenic
GCTCAGACTGCTCAAGCGTG+TGG 0.592158 tig0029079:-22460 Msa1440370:five_prime_UTR
AGCAAGCATCAAACTTGTGA+GGG 0.592861 tig0029079:+20722 None:intergenic
AATCGATCGGAGAGTTCTAC+CGG 0.594959 tig0029079:+24986 None:intergenic
GTTTGAGAAGCAGCATAGAG+TGG 0.595646 tig0029079:-23464 Msa1440370:five_prime_UTR
ATGCGATGGCGAAAGGATGA+CGG 0.597203 tig0029079:-25965 Msa1440370:five_prime_UTR
ATTCAAATGCAAGAAAAGGA+CGG 0.597672 tig0029079:-20691 Msa1440370:CDS
GAACACAGTTGAAACCAGAT+TGG 0.599444 tig0029079:+24821 None:intergenic
ACACTATGGCATGATAGAGT+TGG 0.601658 tig0029079:-26389 Msa1440370:five_prime_UTR
GCTGTCTAGAAATTTGGATG+TGG 0.601699 tig0029079:-27679 Msa1440370:five_prime_UTR
GTCGAATTCGGGAGATGGAG+AGG 0.601823 tig0029079:-20273 Msa1440370:CDS
CTTGAGACTTATCGAAATGG+AGG 0.602255 tig0029079:-22066 Msa1440370:five_prime_UTR
GTTTGAGAAGCAGCATAGAG+TGG 0.605018 tig0029079:-19482 Msa1440370:CDS
ATCTTGATGGATGTAGGGAA+AGG 0.606230 tig0029079:-26668 Msa1440370:five_prime_UTR
CTCTATCATGCCATAGTGTG+TGG 0.606806 tig0029079:+26393 None:intergenic
GCCACTGAGAACTAGTATGG+TGG 0.607785 tig0029079:-20957 Msa1440370:five_prime_UTR
GATTTAGCGGAGGCTTTGTG+CGG 0.608415 tig0029079:+25036 None:intergenic
ATTTGACCAGATTCGACAAG+TGG 0.608851 tig0029079:-27800 Msa1440370:five_prime_UTR
TTAAACCCTCTAAAACTGGA+TGG 0.609462 tig0029079:+21577 None:intergenic
CCGGGAAAAGAGATGCCTGA+TGG 0.609734 tig0029079:-20890 Msa1440370:five_prime_UTR
ACCACCATCTACAACTCCAT+CGG 0.611181 tig0029079:+25531 None:intergenic
AGGGCAATGGATGAAGTTGG+TGG 0.612947 tig0029079:-25481 Msa1440370:five_prime_UTR
AAGCAAGCATCAAACTTGTG+AGG 0.613257 tig0029079:+20721 None:intergenic
CAGTCTGAGCATAGCCACGT+TGG 0.613747 tig0029079:+22473 None:intergenic
TTTATAGAGGGAATCACGCG+TGG 0.614222 tig0029079:+26187 None:intergenic
TAGAGTTGGTGTGTGAATGT+AGG 0.614643 tig0029079:-26375 Msa1440370:five_prime_UTR
ATATAGACTGATACACGGAT+AGG 0.615163 tig0029079:+27623 None:intergenic
GATGGAGTTGTAGATGGTGG+TGG 0.615734 tig0029079:-25529 Msa1440370:five_prime_UTR
GTAGCAAGAAGGATCATTCG+AGG 0.616557 tig0029079:+21046 None:intergenic
TGATGTCCTCGTCGCAATGG+CGG 0.616829 tig0029079:-25011 Msa1440370:five_prime_UTR
CACTGTATCACTAAAACATG+CGG 0.616849 tig0029079:+20988 None:intergenic
CTTCTACGGGTAATGTTGTG+GGG 0.617417 tig0029079:-18589 Msa1440370:exon
ACATACTGAGAGCTCCTACT+GGG 0.618378 tig0029079:-19244 Msa1440370:CDS
TCTATTGATATGATGTCTTG+AGG 0.618511 tig0029079:-23352 Msa1440370:five_prime_UTR
CATGGTTTGATCAGTCTGCA+AGG 0.618845 tig0029079:+26739 None:intergenic
AGCTCATTAAAGCGACCACA+GGG 0.619676 tig0029079:-23089 Msa1440370:intron
ATGTCAATGGAAGTGACTGC+AGG 0.620608 tig0029079:-20817 Msa1440370:CDS
TTCGAAAGGCCGCTACCGAG+TGG 0.621158 tig0029079:-19547 Msa1440370:CDS
TTCGAAAGGCCGCTACCGAG+TGG 0.621158 tig0029079:-23526 Msa1440370:five_prime_UTR
ATTTCCAATGATCGGCATTG+GGG 0.621764 tig0029079:+18147 None:intergenic
GATGGTGTTGAAGTTGGCGG+TGG 0.623232 tig0029079:-25943 Msa1440370:five_prime_UTR
TGGTTGCCATACATGATTAG+GGG 0.623830 tig0029079:+22682 None:intergenic
AGAGTGTTTGAAATGTGGGA+TGG 0.624246 tig0029079:-20149 Msa1440370:CDS
TGCACAAAGAGTTGTTAACT+CGG 0.624623 tig0029079:-19515 Msa1440370:CDS
ATGTGGATACTAAAGTGAGA+AGG 0.624715 tig0029079:-23827 Msa1440370:five_prime_UTR
GAAGCTATTCGAGAAGAAGA+GGG 0.626506 tig0029079:-27823 Msa1440370:intron
AATGGCAGAAGGGTTTCTGT+AGG 0.630365 tig0029079:+23712 None:intergenic
ACTCTTCATCAGCAATTAGG+TGG 0.632287 tig0029079:+21939 None:intergenic
AATATCCGATTGGAAAACCC+AGG 0.633825 tig0029079:-26011 Msa1440370:five_prime_UTR
ATGGCAATTGAAGCTCGTTG+AGG 0.635193 tig0029079:-28403 Msa1440370:five_prime_UTR
GGTTAGGGATGAGTATGCAC+CGG 0.635635 tig0029079:-19428 Msa1440370:intron
GATGAAGTTGGTGGCGATGG+CGG 0.635723 tig0029079:-25472 Msa1440370:five_prime_UTR
AAACCTGGTCAATGGCAGAA+GGG 0.635904 tig0029079:+23702 None:intergenic
CGGCTAGGACCGCTTTCGAA+AGG 0.636060 tig0029079:-23540 Msa1440370:five_prime_UTR
TAATGTAAAAGGTAAGGTGA+CGG 0.636801 tig0029079:-25081 Msa1440370:five_prime_UTR
AAGGCCGCTACCGAGTGGAG+TGG 0.637244 tig0029079:-19542 Msa1440370:CDS
AAGGCCGCTACCGAGTGGAG+TGG 0.637244 tig0029079:-23521 Msa1440370:five_prime_UTR
CAAAATGATGAAGAATAGCA+AGG 0.637826 tig0029079:+18282 None:intergenic
AATTCGGGAGATGGAGAGGA+CGG 0.638289 tig0029079:-20269 Msa1440370:CDS
GCTTGGATATCTATTAGGCA+TGG 0.639413 tig0029079:+26038 None:intergenic
GGAACTTTGAAGCCAAAGGG+TGG 0.640019 tig0029079:+23973 None:intergenic
GAGTTAACTCGGAAAGAAAG+CGG 0.640585 tig0029079:-23486 Msa1440370:five_prime_UTR
TTGTTAACTCGGAAAGAGAG+CGG 0.640754 tig0029079:-19504 Msa1440370:CDS
AACAACCTAAAAGGGCTAGT+CGG 0.642277 tig0029079:+19212 None:intergenic
GGGTTCTCATCATCTCGGTG+TGG 0.642737 tig0029079:-19189 Msa1440370:CDS
GGGTTCTCATCATCTCGGTG+TGG 0.642737 tig0029079:-23166 Msa1440370:five_prime_UTR
AAAATGGTGCTTCCAGCACA+GGG 0.643044 tig0029079:-21435 Msa1440370:intron
GACCGCCCATTAGTTCAGCT+AGG 0.643366 tig0029079:+21716 None:intergenic
CGTAAATATTCCAAAATCCG+CGG 0.647005 tig0029079:+21645 None:intergenic
GTAACTTTGAAGCCAAAGGG+TGG 0.650789 tig0029079:+19605 None:intergenic
GAAGTTGTGCATACATCTGG+CGG 0.651844 tig0029079:-22036 Msa1440370:five_prime_UTR
AGTCAATAACACAATTAACA+TGG 0.652172 tig0029079:+26721 None:intergenic
CCATTGCGACGAGGACATCA+CGG 0.652805 tig0029079:+25014 None:intergenic
TGCGGCAACTGGAAACAGAA+CGG 0.653414 tig0029079:-21085 Msa1440370:five_prime_UTR
ACGGCGAATGAGGAGACGAA+TGG 0.653590 tig0029079:-20250 Msa1440370:CDS
GCGAGATATTAGAAAAGCTG+AGG 0.654014 tig0029079:-25408 Msa1440370:five_prime_UTR
ATAATGCAGTTCAATAAGCG+AGG 0.657195 tig0029079:-22147 Msa1440370:intron
ACATCATATCAATAGACTCA+AGG 0.658508 tig0029079:+23359 None:intergenic
GTCGGAACAAACTTCCCAGT+AGG 0.660421 tig0029079:+19230 None:intergenic
AGGACGGGATCTTCAGTGTG+CGG 0.664290 tig0029079:-21103 Msa1440370:five_prime_UTR
GAAAAGGTACTTCCAATCTG+TGG 0.664912 tig0029079:+21673 None:intergenic
CCGGAACCGCCATTGCGACG+AGG 0.668033 tig0029079:+25005 None:intergenic
GTTGGCGATGGAGATGTACA+TGG 0.668187 tig0029079:-25439 Msa1440370:five_prime_UTR
GATGTGAAGTGTGCAGACAG+CGG 0.669637 tig0029079:-20772 Msa1440370:CDS
ACAGAACCCAATGAGTAAGA+GGG 0.670609 tig0029079:+24745 None:intergenic
TCAGTTTGAAGCCTTCTGTG+CGG 0.678971 tig0029079:-20860 Msa1440370:five_prime_UTR
TCGACTTCTAGAAACTATGG+TGG 0.680954 tig0029079:-21769 Msa1440370:five_prime_UTR
GGACATCACGGATTTAGCGG+AGG 0.683899 tig0029079:+25026 None:intergenic
CAAAGTTCCAAGAACAAACG+GGG 0.685277 tig0029079:-23959 Msa1440370:five_prime_UTR
TTATAGAGGGAATCACGCGT+GGG 0.688730 tig0029079:+26188 None:intergenic
TACGAAGAATCCAATAACTG+AGG 0.689869 tig0029079:-21626 Msa1440370:five_prime_UTR
ACCGATGGAGTTGTAGATGG+TGG 0.690749 tig0029079:-25532 Msa1440370:five_prime_UTR
GGATGGCTAGAGCATGAACA+TGG 0.693348 tig0029079:+23733 None:intergenic
TGTCAGGGAAACATTGCTGA+AGG 0.696155 tig0029079:-18672 Msa1440370:intron
TGCCTAGCTGAACTAATGGG+CGG 0.697388 tig0029079:-21718 Msa1440370:five_prime_UTR
AGGTTTCCCATCAACCACAA+CGG 0.697501 tig0029079:+21552 None:intergenic
ACAAATGCAATCATTCAACA+AGG 0.705448 tig0029079:+26616 None:intergenic
AAACCATATAGACTGATACA+CGG 0.717551 tig0029079:+27618 None:intergenic
TGCGGAGTTTAGCACATACG+GGG 0.722432 tig0029079:-18617 Msa1440370:CDS
CCCACCATACTAGTTCTCAG+TGG 0.729319 tig0029079:+20956 None:intergenic
GAATTGAACTCAACCCAACG+TGG 0.736332 tig0029079:-22487 Msa1440370:five_prime_UTR
GATGGCGAAAGGATGACGGA+TGG 0.756508 tig0029079:-25961 Msa1440370:five_prime_UTR
GGCGATGGAGATGTACATGG+TGG 0.786952 tig0029079:-25436 Msa1440370:five_prime_UTR

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TTATTAATTTTTTTTTTTTT+TGG - tig0029079:25981-26000 Msa1440370:five_prime_UTR 0.0%
!!! TGATTAATTAACTTTTTAAT+TGG - tig0029079:23824-23843 Msa1440370:five_prime_UTR 10.0%
!! ATTAAATGAGTTAAAATATT+TGG - tig0029079:25442-25461 Msa1440370:five_prime_UTR 10.0%
!! GTCAAAATAAATAAATTTAT+CGG - tig0029079:28140-28159 Msa1440370:intron 10.0%
!! TCAAAATAAATAAATTTATC+GGG - tig0029079:28141-28160 Msa1440370:intron 10.0%
!!! ACACAAAGTTTTTTATATAT+AGG + tig0029079:22505-22524 None:intergenic 15.0%
!!! TTAATTAACTTTTTAATTGG+AGG - tig0029079:23827-23846 Msa1440370:five_prime_UTR 15.0%
!!! TTTTTAGTGAATTAAAGTTA+AGG - tig0029079:25259-25278 Msa1440370:intron 15.0%
!!! ATAAAAGTATCTGAAATTTT+AGG - tig0029079:26811-26830 Msa1440370:intron 15.0%
!! ATCACTATCATTTATTAAAA+TGG + tig0029079:27885-27904 None:intergenic 15.0%
!! AAAAACTTCAGTTATTTATT+TGG + tig0029079:28299-28318 None:intergenic 15.0%
!! AATTGAATATAGAATCCTTA+GGG + tig0029079:18425-18444 None:intergenic 20.0%
!! ACTTATTTGAACTTATTTAG+TGG - tig0029079:18590-18609 Msa1440370:exon 20.0%
!!! AAGTTTTTACACAATTAACA+TGG + tig0029079:19212-19231 None:intergenic 20.0%
!! AAAAATTCAGAGAATTTCAA+TGG + tig0029079:19711-19730 None:intergenic 20.0%
!! ATAAAAGGAAATTGAGTTTA+TGG + tig0029079:19753-19772 None:intergenic 20.0%
!!! AAGTTTTAACACAATTAACA+TGG + tig0029079:19870-19889 None:intergenic 20.0%
!!! CAAAAGTACAAACTTAATAA+TGG + tig0029079:20071-20090 None:intergenic 20.0%
!!! CATTATTAAGTTTGTACTTT+TGG - tig0029079:20069-20088 Msa1440370:intron 20.0%
!! AAGAATATTGTTCTTATAGA+AGG - tig0029079:20366-20385 Msa1440370:intron 20.0%
!! GCTACAAATTCAATTAATAA+AGG + tig0029079:20420-20439 None:intergenic 20.0%
!! TAAGAATATCTAGAAAATAG+AGG + tig0029079:20469-20488 None:intergenic 20.0%
!! TCATTAAAATGCACAAATAT+TGG - tig0029079:22054-22073 Msa1440370:five_prime_UTR 20.0%
!! CAATAAAAAAAGGAAAGAAA+GGG + tig0029079:22185-22204 None:intergenic 20.0%
!! ACAATAAAAAAAGGAAAGAA+AGG + tig0029079:22186-22205 None:intergenic 20.0%
!! GAAAATTCGACAATAAAAAA+AGG + tig0029079:22195-22214 None:intergenic 20.0%
!!! TTTCTGTGTAATTTTTGAAA+TGG - tig0029079:22211-22230 Msa1440370:intron 20.0%
!!! CTGTTAATTGAGTATTTTTT+GGG - tig0029079:22526-22545 Msa1440370:intron 20.0%
!! TCTGATTAAGATTAATGTTA+TGG - tig0029079:24262-24281 Msa1440370:intron 20.0%
!! CTGATTAAGATTAATGTTAT+GGG - tig0029079:24263-24282 Msa1440370:intron 20.0%
!! TTAGTAATGCAAATAACTTA+GGG + tig0029079:24361-24380 None:intergenic 20.0%
!! ATTAGTAATGCAAATAACTT+AGG + tig0029079:24362-24381 None:intergenic 20.0%
!! CAATGTCATTAATTACAAAA+AGG + tig0029079:25236-25255 None:intergenic 20.0%
!! TCTCAACAAAAATAATATCA+GGG + tig0029079:25486-25505 None:intergenic 20.0%
!! TTCTCAACAAAAATAATATC+AGG + tig0029079:25487-25506 None:intergenic 20.0%
!!! TTTCTGTGTAATTTTTGAAA+TGG - tig0029079:22211-22230 Msa1440370:intron 20.0%
!!! ACTGTTAATTGAGTATTTTT+TGG - tig0029079:26890-26909 Msa1440370:intron 20.0%
!!! CTGTTAATTGAGTATTTTTT+GGG - tig0029079:22526-22545 Msa1440370:intron 20.0%
!! TGTGTTTAGTATAAAAATCT+TGG - tig0029079:27626-27645 Msa1440370:five_prime_UTR 20.0%
!! GTGTTTAGTATAAAAATCTT+GGG - tig0029079:27627-27646 Msa1440370:five_prime_UTR 20.0%
!!! AACTGAAGTTTTTTAAGTAA+CGG - tig0029079:28306-28325 Msa1440370:five_prime_UTR 20.0%
!!! AAATTTTGATTTCCAATGAT+CGG + tig0029079:28494-28513 None:intergenic 20.0%
!! TGGAAATCAAAATTTATTGA+TGG - tig0029079:28499-28518 Msa1440370:five_prime_UTR 20.0%
! CAATTGAATATAGAATCCTT+AGG + tig0029079:18426-18445 None:intergenic 25.0%
! CATGATACAAAAACAGAATT+TGG + tig0029079:18481-18500 None:intergenic 25.0%
! ATCAAATCTAATGTCCTTAT+TGG - tig0029079:18768-18787 Msa1440370:intron 25.0%
! TTAACATGGTTTAATCATTG+AGG + tig0029079:19198-19217 None:intergenic 25.0%
! TATTTAGCAATTGATCTGTA+TGG + tig0029079:19254-19273 None:intergenic 25.0%
! TACAGATCAATTGCTAAATA+TGG - tig0029079:19254-19273 Msa1440370:CDS 25.0%
!! ATACTTCTAAAGAAAACACT+TGG + tig0029079:19297-19316 None:intergenic 25.0%
! AAAAACTACCAAAGGAAATA+AGG + tig0029079:19360-19379 None:intergenic 25.0%
!!! TATTTCCTTTGGTAGTTTTT+TGG - tig0029079:19360-19379 Msa1440370:intron 25.0%
! TTAAACCAAAAAACTACCAA+AGG + tig0029079:19368-19387 None:intergenic 25.0%
! AAATTTGTACTACTTTGCTA+TGG - tig0029079:19560-19579 Msa1440370:CDS 25.0%
! ATTATCACTAAGTGAATCAT+TGG + tig0029079:19587-19606 None:intergenic 25.0%
! TCAATTTCCTGATTTAATTG+AGG + tig0029079:19682-19701 None:intergenic 25.0%
! ATGTTGAAATGCTAGATAAA+AGG + tig0029079:19768-19787 None:intergenic 25.0%
! TTAACATGGTTTAATCATTG+AGG + tig0029079:19198-19217 None:intergenic 25.0%
! AGTCAATAACACAATTAACA+TGG + tig0029079:19912-19931 None:intergenic 25.0%
!!! TGTGTTATTGACTATGTTTT+TGG - tig0029079:19919-19938 Msa1440370:intron 25.0%
! AGCAAACGACAAAAATTTAA+TGG - tig0029079:20213-20232 Msa1440370:CDS 25.0%
!!! TAGTTGTTTTTGTGAATCAA+AGG - tig0029079:20305-20324 Msa1440370:intron 25.0%
! AGAAAATAGAGGTTTATAGA+GGG + tig0029079:20458-20477 None:intergenic 25.0%
! TAGAAAATAGAGGTTTATAG+AGG + tig0029079:20459-20478 None:intergenic 25.0%
! TGAAAATACAATTAGTGTGA+TGG + tig0029079:21402-21421 None:intergenic 25.0%
! ATAACTGAAACTAAATCGAT+CGG + tig0029079:21660-21679 None:intergenic 25.0%
! GTAACAAAGCACATATAAAA+AGG - tig0029079:21725-21744 Msa1440370:five_prime_UTR 25.0%
!!! GTGTTTTTTAAGTCAATGTT+TGG - tig0029079:21922-21941 Msa1440370:five_prime_UTR 25.0%
! AGAGAGAGAATTAAAAAGAA+GGG + tig0029079:22160-22179 None:intergenic 25.0%
! AAGAGAGAGAATTAAAAAGA+AGG + tig0029079:22161-22180 None:intergenic 25.0%
!!! GATACTTTACTTTTATCTGA+TGG + tig0029079:22437-22456 None:intergenic 25.0%
!!! AGTAAAGTATCTGAGATTTT+AGG - tig0029079:22446-22465 Msa1440370:five_prime_UTR 25.0%
!!! GCTGTTAATTGAGTATTTTT+TGG - tig0029079:22525-22544 Msa1440370:intron 25.0%
! TATGTTTCATGAGTAATTAG+AGG - tig0029079:23616-23635 Msa1440370:intron 25.0%
! GTGTTTGGTATAAAAATCTT+AGG - tig0029079:23648-23667 Msa1440370:intron 25.0%
! CAAATTGTAACAAATCTAGT+TGG - tig0029079:24295-24314 Msa1440370:intron 25.0%
! TACTAATATGCATGTTATGT+TGG - tig0029079:24375-24394 Msa1440370:intron 25.0%
! TTGTTCATAAAAATCATTCG+AGG + tig0029079:24747-24766 None:intergenic 25.0%
! GTCAAATAAACTTTATAAGC+CGG - tig0029079:24934-24953 Msa1440370:five_prime_UTR 25.0%
! TGAGTTAAAATATTTGGTTG+TGG - tig0029079:25448-25467 Msa1440370:five_prime_UTR 25.0%
!! TTTTTGTTGAGAAAGATTCA+TGG - tig0029079:25494-25513 Msa1440370:five_prime_UTR 25.0%
!! TTTTGTTGAGAAAGATTCAT+GGG - tig0029079:25495-25514 Msa1440370:five_prime_UTR 25.0%
!!! AGTTTTTTCTAAATCAGCAA+AGG + tig0029079:26033-26052 None:intergenic 25.0%
! TATCATTGAATTTATCAGCA+AGG + tig0029079:26089-26108 None:intergenic 25.0%
! ACAAACATAACATGTATAGA+GGG + tig0029079:26255-26274 None:intergenic 25.0%
! AACAAACATAACATGTATAG+AGG + tig0029079:26256-26275 None:intergenic 25.0%
!! CATGTACTTACATTATTTTC+AGG - tig0029079:26321-26340 Msa1440370:five_prime_UTR 25.0%
! TAAATTCCGTTTACCTATAT+TGG - tig0029079:26424-26443 Msa1440370:five_prime_UTR 25.0%
!!! TTGTTTTGTATGAGCATATA+TGG - tig0029079:26564-26583 Msa1440370:five_prime_UTR 25.0%
!! TGTATTAGTTAGTATTGAAC+TGG - tig0029079:26596-26615 Msa1440370:five_prime_UTR 25.0%
! AATAAAGAGAAAAGTGACAA+AGG + tig0029079:26649-26668 None:intergenic 25.0%
!!! GCACGAACTTTTTTATATAT+AGG + tig0029079:26870-26889 None:intergenic 25.0%
! TGTTTCATATGAGTAATTAG+AGG - tig0029079:27595-27614 Msa1440370:five_prime_UTR 25.0%
!!! TGATGTTTCTTTTTTATGTC+TGG - tig0029079:27779-27798 Msa1440370:five_prime_UTR 25.0%
!! CTGAATGTTGACATTTTTAT+TGG - tig0029079:27935-27954 Msa1440370:intron 25.0%
!!! GTACTTAATTTTTCAGCTAT+AGG + tig0029079:28388-28407 None:intergenic 25.0%
!! CATCTAAAATGAGTTAAAGA+TGG + tig0029079:28421-28440 None:intergenic 25.0%
!! CATCTTTAACTCATTTTAGA+TGG - tig0029079:28419-28438 Msa1440370:five_prime_UTR 25.0%
TGAAATTTGCGAAGTGAAAA+CGG + tig0029079:18286-18305 None:intergenic 30.0%
TTTCACTTCGCAAATTTCAT+TGG - tig0029079:18287-18306 Msa1440370:three_prime_UTR 30.0%
!! TATCTGATATTTGCTATCTC+AGG - tig0029079:18544-18563 Msa1440370:three_prime_UTR 30.0%
TAAACTGAAACAATCCAAAC+AGG + tig0029079:18571-18590 None:intergenic 30.0%
!! TAGTGGAATAAGTTTTGTAG+TGG - tig0029079:18607-18626 Msa1440370:CDS 30.0%
! TGACTTATTTGACTTATCTC+AGG - tig0029079:18636-18655 Msa1440370:CDS 30.0%
! GACTTATTTGACTTATCTCA+GGG - tig0029079:18637-18656 Msa1440370:CDS 30.0%
AACACCAATCAAAACAAAAC+AGG + tig0029079:18663-18682 None:intergenic 30.0%
!! AATGTCCTTATTGGTTGTTT+TGG - tig0029079:18777-18796 Msa1440370:intron 30.0%
TTCATCCAAAACAACCAATA+AGG + tig0029079:18785-18804 None:intergenic 30.0%
!!! TATTGGTTGTTTTGGATGAA+TGG - tig0029079:18785-18804 Msa1440370:intron 30.0%
AAACCATATAGACTGATACA+CGG + tig0029079:19015-19034 None:intergenic 30.0%
! TATCAGTCTATATGGTTTGT+AGG - tig0029079:19017-19036 Msa1440370:intron 30.0%
TTTCAACATTTAGCATGTAC+TGG - tig0029079:19121-19140 Msa1440370:intron 30.0%
! ATACCATACCTTATTTCCTT+TGG - tig0029079:19349-19368 Msa1440370:intron 30.0%
TGCAACTTTATCAGCTTAAA+AGG + tig0029079:19444-19463 None:intergenic 30.0%
! TTTTAAGCTGATAAAGTTGC+AGG - tig0029079:19443-19462 Msa1440370:CDS 30.0%
TGATTTAATTGAGGCAATGT+TGG + tig0029079:19673-19692 None:intergenic 30.0%
AACATTGCCTCAATTAAATC+AGG - tig0029079:19672-19691 Msa1440370:intron 30.0%
TTTCAACATTTAGCATGTAC+TGG - tig0029079:19121-19140 Msa1440370:intron 30.0%
ACAAATGCAATCATTCAACA+AGG + tig0029079:20017-20036 None:intergenic 30.0%
TATTGTTCTTATAGAAGGTG+AGG - tig0029079:20371-20390 Msa1440370:intron 30.0%
!! AACTTGTTGATGCTTCAATA+TGG + tig0029079:20540-20559 None:intergenic 30.0%
TGAATGCTTGGATATCTATT+AGG + tig0029079:20600-20619 None:intergenic 30.0%
GAGAAAGTCCAAAAGAATTA+GGG - tig0029079:20956-20975 Msa1440370:five_prime_UTR 30.0%
TCTATTATGCATTTGACACA+CGG - tig0029079:21293-21312 Msa1440370:intron 30.0%
TCGTTTGTCAGAAAAAAATG+TGG - tig0029079:21424-21443 Msa1440370:intron 30.0%
CAGAAGTAATGTAAAAGGTA+AGG - tig0029079:21543-21562 Msa1440370:five_prime_UTR 30.0%
TAATGTAAAAGGTAAGGTGA+CGG - tig0029079:21549-21568 Msa1440370:five_prime_UTR 30.0%
GAAACAATGTTTACCTGTAT+AGG + tig0029079:21857-21876 None:intergenic 30.0%
! TTTTGTCTTTAAGCAAAGAC+TGG - tig0029079:21988-22007 Msa1440370:five_prime_UTR 30.0%
TATGAAGAGTTCAGAGAAAT+AGG - tig0029079:22560-22579 Msa1440370:intron 30.0%
TTCAAAGTTCCAAGAACAAA+CGG - tig0029079:22669-22688 Msa1440370:intron 30.0%
TTATTGCATCTACAGCAAAA+TGG - tig0029079:22780-22799 Msa1440370:five_prime_UTR 30.0%
!!! ATGTTTTGATCATTCTGTGT+TGG - tig0029079:22959-22978 Msa1440370:intron 30.0%
CATACATAAAGTTTCCTGAA+GGG + tig0029079:23045-23064 None:intergenic 30.0%
!!! TAGAGTGGTTTTAAAGACAA+TGG - tig0029079:23181-23200 Msa1440370:five_prime_UTR 30.0%
TTTAAAGACAATGGAAAGAG+AGG - tig0029079:23190-23209 Msa1440370:five_prime_UTR 30.0%
ACATCATATCAATAGACTCA+AGG + tig0029079:23274-23293 None:intergenic 30.0%
TCTATTGATATGATGTCTTG+AGG - tig0029079:23278-23297 Msa1440370:intron 30.0%
CTATTGATATGATGTCTTGA+GGG - tig0029079:23279-23298 Msa1440370:intron 30.0%
ATTAAAAACAAGCAGTGGAA+TGG + tig0029079:23325-23344 None:intergenic 30.0%
!! ATTTCTCATTTTTGCAATGC+AGG - tig0029079:23371-23390 Msa1440370:five_prime_UTR 30.0%
TAGCTATCATTATGTTCTCT+CGG + tig0029079:23401-23420 None:intergenic 30.0%
TAATGAGCTCTTATGTTGTT+GGG + tig0029079:23530-23549 None:intergenic 30.0%
TTAATGAGCTCTTATGTTGT+TGG + tig0029079:23531-23550 None:intergenic 30.0%
TGTGTCAATAACACTAATAG+TGG + tig0029079:23717-23736 None:intergenic 30.0%
!! AGTAAACTGTTTCTGTTACA+AGG - tig0029079:23756-23775 Msa1440370:five_prime_UTR 30.0%
TTAATTGGAGGTAGTTATGT+TGG - tig0029079:23839-23858 Msa1440370:five_prime_UTR 30.0%
! ACCAAGTAAATTTTCCACAA+GGG + tig0029079:23885-23904 None:intergenic 30.0%
AAACATCACCTTCTTTGTAT+TGG + tig0029079:23971-23990 None:intergenic 30.0%
CCAAAAACAAGTTACATTCA+TGG + tig0029079:24001-24020 None:intergenic 30.0%
!!! CCATGAATGTAACTTGTTTT+TGG - tig0029079:23998-24017 Msa1440370:five_prime_UTR 30.0%
AAAACTCTTCATCAGCAATT+AGG + tig0029079:24697-24716 None:intergenic 30.0%
AGGCATGAAAATTCTATCTT+GGG + tig0029079:24823-24842 None:intergenic 30.0%
AAGGCATGAAAATTCTATCT+TGG + tig0029079:24824-24843 None:intergenic 30.0%
! AATTTTCATGCCTTTTGTGA+AGG - tig0029079:24830-24849 Msa1440370:five_prime_UTR 30.0%
TTAAAATATTTGGTTGTGGC+AGG - tig0029079:25452-25471 Msa1440370:five_prime_UTR 30.0%
CAACAAAAATAATATCAGGG+TGG + tig0029079:25483-25502 None:intergenic 30.0%
TACTAATATTCGTAGCAAGA+AGG + tig0029079:25598-25617 None:intergenic 30.0%
!! ATTTTAGTGGTTGATGTCAA+TGG - tig0029079:25800-25819 Msa1440370:intron 30.0%
GGATATTCAAATGCAAGAAA+AGG - tig0029079:25935-25954 Msa1440370:five_prime_UTR 30.0%
ATTCAAATGCAAGAAAAGGA+CGG - tig0029079:25939-25958 Msa1440370:five_prime_UTR 30.0%
!! TATGAAGAGTGTTTGAAATG+TGG - tig0029079:26476-26495 Msa1440370:five_prime_UTR 30.0%
!! ATGAAGAGTGTTTGAAATGT+GGG - tig0029079:26477-26496 Msa1440370:five_prime_UTR 30.0%
! TTATGTCTCAAAACCTTTTG+AGG - tig0029079:26508-26527 Msa1440370:five_prime_UTR 30.0%
! ATTAGTTAGTATTGAACTGG+TGG - tig0029079:26599-26618 Msa1440370:five_prime_UTR 30.0%
!!! TAGTCTAAGATGTTTTGGTT+TGG - tig0029079:26710-26729 Msa1440370:five_prime_UTR 30.0%
! TTTCAGATACTTTTATCTGC+TGG + tig0029079:26807-26826 None:intergenic 30.0%
TGAACTCTTCTTCATATCTA+TGG + tig0029079:26921-26940 None:intergenic 30.0%
GAAAGAGATTTAGTGTTAGT+TGG - tig0029079:26957-26976 Msa1440370:intron 30.0%
! AGAAACTTTTGCAGAATATG+CGG - tig0029079:27049-27068 Msa1440370:intron 30.0%
TAGAGTGGTTATAAAGACAA+TGG - tig0029079:27163-27182 Msa1440370:intron 30.0%
TATAAAGACAATGGAAAGAG+AGG - tig0029079:27172-27191 Msa1440370:intron 30.0%
AATAAAAACAAGCAGAGGAA+TGG + tig0029079:27306-27325 None:intergenic 30.0%
!! ATTTCTCATTTTTGCAATGC+AGG - tig0029079:23371-23390 Msa1440370:five_prime_UTR 30.0%
AGCTGAAACATAGTGAAATA+AGG + tig0029079:27549-27568 None:intergenic 30.0%
TATGAGTAATTAGAGGATGA+AGG - tig0029079:27602-27621 Msa1440370:five_prime_UTR 30.0%
!! TTGACATTTTTATTGGTGTC+AGG - tig0029079:27942-27961 Msa1440370:intron 30.0%
!!! TGACATTTTTATTGGTGTCA+GGG - tig0029079:27943-27962 Msa1440370:intron 30.0%
!! ACTTTTAACCGACTTTTTGA+TGG - tig0029079:27984-28003 Msa1440370:intron 30.0%
!!! TTATTTTGACTCCAACTTTC+AGG + tig0029079:28130-28149 None:intergenic 30.0%
! AATAAATTTATCGGGCCTTT+TGG - tig0029079:28149-28168 Msa1440370:intron 30.0%
!!! AGACTCGTTATTTTTCAACT+TGG - tig0029079:28251-28270 Msa1440370:intron 30.0%
!!! GACTCGTTATTTTTCAACTT+GGG - tig0029079:28252-28271 Msa1440370:intron 30.0%
CAAAATGATGAAGAATAGCA+AGG + tig0029079:28351-28370 None:intergenic 30.0%
! GCTATTCTTCATCATTTTGT+AGG - tig0029079:28352-28371 Msa1440370:five_prime_UTR 30.0%
AGTCTGAAAGGAGATTAAAC+GGG + tig0029079:18131-18150 None:intergenic 35.0%
GAGTCTGAAAGGAGATTAAA+CGG + tig0029079:18132-18151 None:intergenic 35.0%
TTGTGTCTGAAAAATCGCAA+TGG + tig0029079:18160-18179 None:intergenic 35.0%
GAGAAAAAAGGAGCTTCAAT+CGG + tig0029079:18318-18337 None:intergenic 35.0%
TTGCAGAGAAGAGAGAAAAA+AGG + tig0029079:18330-18349 None:intergenic 35.0%
TGCTTCGAAAACTCTTGATT+AGG - tig0029079:18384-18403 Msa1440370:three_prime_UTR 35.0%
GCTTCGAAAACTCTTGATTA+GGG - tig0029079:18385-18404 Msa1440370:three_prime_UTR 35.0%
GTTTATACTCTCAAACCCTA+AGG - tig0029079:18407-18426 Msa1440370:three_prime_UTR 35.0%
TTTGTGCTCACTGCTAAAAT+GGG + tig0029079:18712-18731 None:intergenic 35.0%
! TTTTGTGCTCACTGCTAAAA+TGG + tig0029079:18713-18732 None:intergenic 35.0%
ATATAGACTGATACACGGAT+AGG + tig0029079:19010-19029 None:intergenic 35.0%
TATCCGTGTATCAGTCTATA+TGG - tig0029079:19009-19028 Msa1440370:intron 35.0%
TATGGTTTAATCAGTCTGCA+GGG + tig0029079:19236-19255 None:intergenic 35.0%
CTACCAAAGGAAATAAGGTA+TGG + tig0029079:19355-19374 None:intergenic 35.0%
GAAGCATGACATTATTGACA+TGG + tig0029079:19618-19637 None:intergenic 35.0%
! GTTTTCATGAGCTATCTTGA+TGG - tig0029079:19949-19968 Msa1440370:intron 35.0%
! TTCTAAGTGTGACACGTTTT+TGG + tig0029079:20169-20188 None:intergenic 35.0%
! ATTTAATGGACCACACACTA+TGG - tig0029079:20227-20246 Msa1440370:CDS 35.0%
CTAATCCTATTTGATCTCCT+GGG + tig0029079:20639-20658 None:intergenic 35.0%
TCTAATCCTATTTGATCTCC+TGG + tig0029079:20640-20659 None:intergenic 35.0%
GAGAAGGTCCAAAAGAATTA+GGG - tig0029079:20776-20795 Msa1440370:CDS 35.0%
! AACAATGGCCCTAATTCTTT+TGG + tig0029079:20787-20806 None:intergenic 35.0%
GGAGAAAGTCCAAAAGAATT+AGG - tig0029079:20955-20974 Msa1440370:five_prime_UTR 35.0%
GAGAAGGTCAAAAAGAATCA+GGG - tig0029079:21130-21149 Msa1440370:five_prime_UTR 35.0%
AAAAATGTGGAGAAACAAGC+TGG - tig0029079:21437-21456 Msa1440370:five_prime_UTR 35.0%
AGCTGGAGATATCAAGAAAT+TGG - tig0029079:21454-21473 Msa1440370:five_prime_UTR 35.0%
GAGTGCAGAAGTAATGTAAA+AGG - tig0029079:21538-21557 Msa1440370:five_prime_UTR 35.0%
AATCTAGTCCAGAAAGAGAA+AGG - tig0029079:21763-21782 Msa1440370:five_prime_UTR 35.0%
CCTGTATAGGAAAGAGATAA+TGG + tig0029079:21844-21863 None:intergenic 35.0%
CCATTATCTCTTTCCTATAC+AGG - tig0029079:21841-21860 Msa1440370:five_prime_UTR 35.0%
TAACAACCCTCTTACTCATT+GGG - tig0029079:21879-21898 Msa1440370:five_prime_UTR 35.0%
! AAATATTGGCTGTTGAGAGA+AGG - tig0029079:22068-22087 Msa1440370:five_prime_UTR 35.0%
! AATATTGGCTGTTGAGAGAA+GGG - tig0029079:22069-22088 Msa1440370:five_prime_UTR 35.0%
CAAGCTTATGTCTCAAAAGA+TGG + tig0029079:22128-22147 None:intergenic 35.0%
CCAAACATGATGAATGATTG+AGG + tig0029079:22281-22300 None:intergenic 35.0%
CCTCAATCATTCATCATGTT+TGG - tig0029079:22278-22297 Msa1440370:intron 35.0%
! TCTTGTTTCCTAAGACTCTT+AGG - tig0029079:22321-22340 Msa1440370:intron 35.0%
CTCTGAACTCTTCATATCTA+TGG + tig0029079:22556-22575 None:intergenic 35.0%
GAAAGAGATTTAGTGTTAGC+TGG - tig0029079:22589-22608 Msa1440370:intron 35.0%
TCAAAGTTCCAAGAACAAAC+GGG - tig0029079:22670-22689 Msa1440370:intron 35.0%
CAACAAAAATTTGAGAAGCC+GGG + tig0029079:22731-22750 None:intergenic 35.0%
GCAACAAAAATTTGAGAAGC+CGG + tig0029079:22732-22751 None:intergenic 35.0%
! GTTGCTTTGTATTCTTCTGA+TGG - tig0029079:22747-22766 Msa1440370:five_prime_UTR 35.0%
ATGTGGATACTAAAGTGAGA+AGG - tig0029079:22803-22822 Msa1440370:intron 35.0%
TACTAAAGTGAGAAGGAAAG+AGG - tig0029079:22810-22829 Msa1440370:intron 35.0%
AAAACATTCAAGCACAAACC+TGG + tig0029079:22946-22965 None:intergenic 35.0%
! TGCTTTTATGATTTCCCTTC+AGG - tig0029079:23028-23047 Msa1440370:intron 35.0%
GCATACATAAAGTTTCCTGA+AGG + tig0029079:23046-23065 None:intergenic 35.0%
GGAAACTTTATGTATGCTTC+AGG - tig0029079:23049-23068 Msa1440370:intron 35.0%
! GGAAACTTTTGCCGAATATA+CGG - tig0029079:23070-23089 Msa1440370:intron 35.0%
CTATGCACAAAGAGTTAACT+CGG - tig0029079:23133-23152 Msa1440370:five_prime_UTR 35.0%
CCACAATTAAAAACAAGCAG+TGG + tig0029079:23330-23349 None:intergenic 35.0%
!!! CCACTGCTTGTTTTTAATTG+TGG - tig0029079:23327-23346 Msa1440370:intron 35.0%
!!! CTGCTTGTTTTTAATTGTGG+AGG - tig0029079:23330-23349 Msa1440370:intron 35.0%
GGGAGCTTAAATTTGTAAAC+AGG + tig0029079:23501-23520 None:intergenic 35.0%
TGAAATAAGGATATACCCTG+TGG + tig0029079:23559-23578 None:intergenic 35.0%
CATGAGTAATTAGAGGATGA+AGG - tig0029079:23623-23642 Msa1440370:intron 35.0%
! AACACTAATAGTGGCATTGA+CGG + tig0029079:23708-23727 None:intergenic 35.0%
TCTGTTACAAGGCTTGTATT+TGG - tig0029079:23767-23786 Msa1440370:five_prime_UTR 35.0%
TCCCTTGTGGAAAATTTACT+TGG - tig0029079:23881-23900 Msa1440370:five_prime_UTR 35.0%
! GACCAAGTAAATTTTCCACA+AGG + tig0029079:23886-23905 None:intergenic 35.0%
AATTTACTTGGTCAACTTGC+TGG - tig0029079:23893-23912 Msa1440370:five_prime_UTR 35.0%
TTGGTTGCCATACATGATTA+GGG + tig0029079:23952-23971 None:intergenic 35.0%
ATTGGTTGCCATACATGATT+AGG + tig0029079:23953-23972 None:intergenic 35.0%
TATGGCAACCAATACAAAGA+AGG - tig0029079:23960-23979 Msa1440370:five_prime_UTR 35.0%
GGAAACATCAAATGACATGT+AGG - tig0029079:24032-24051 Msa1440370:intron 35.0%
ACATCAAATGACATGTAGGT+AGG - tig0029079:24036-24055 Msa1440370:intron 35.0%
! GCTACTGTCATTACATTTTC+TGG - tig0029079:24067-24086 Msa1440370:intron 35.0%
!!! CATTTTCTGGAACTGACTTT+CGG - tig0029079:24080-24099 Msa1440370:intron 35.0%
! ACACTGCCAGTTATGAATTT+TGG + tig0029079:24237-24256 None:intergenic 35.0%
! AACAGCAAAAGTGTACTTGA+AGG + tig0029079:24420-24439 None:intergenic 35.0%
ATAATGCAGTTCAATAAGCG+AGG - tig0029079:24483-24502 Msa1440370:intron 35.0%
AAGCTTGAGACTTATCGAAA+TGG - tig0029079:24561-24580 Msa1440370:intron 35.0%
AGATGTATGCACAACTTCTT+CGG + tig0029079:24592-24611 None:intergenic 35.0%
TGTAATCTCAAAACGCTAAG+TGG - tig0029079:24618-24637 Msa1440370:intron 35.0%
CGATGCTTCAACTAAAAAAG+TGG - tig0029079:24721-24740 Msa1440370:five_prime_UTR 35.0%
TTATGAACAAGTCACCTAGA+TGG - tig0029079:24757-24776 Msa1440370:five_prime_UTR 35.0%
TATGAACAAGTCACCTAGAT+GGG - tig0029079:24758-24777 Msa1440370:five_prime_UTR 35.0%
! AACTCGACTTCTAGAAACTA+TGG - tig0029079:24858-24877 Msa1440370:five_prime_UTR 35.0%
! AAGTACCTTTTCATTTACCG+CGG - tig0029079:24968-24987 Msa1440370:five_prime_UTR 35.0%
AAAATCCGCGGTAAATGAAA+AGG + tig0029079:24976-24995 None:intergenic 35.0%
! TTTTCATTTACCGCGGATTT+TGG - tig0029079:24975-24994 Msa1440370:five_prime_UTR 35.0%
CGTAAATATTCCAAAATCCG+CGG + tig0029079:24988-25007 None:intergenic 35.0%
TACGAAGAATCCAATAACTG+AGG - tig0029079:25004-25023 Msa1440370:five_prime_UTR 35.0%
!!! ATCTACCATCCAGTTTTAGA+GGG - tig0029079:25048-25067 Msa1440370:five_prime_UTR 35.0%
!! TTAAACCCTCTAAAACTGGA+TGG + tig0029079:25056-25075 None:intergenic 35.0%
AGATACCATTTGAAGAGACT+TGG - tig0029079:25119-25138 Msa1440370:five_prime_UTR 35.0%
GATACCATTTGAAGAGACTT+GGG - tig0029079:25120-25139 Msa1440370:five_prime_UTR 35.0%
!! CAAAGAAACAGCCTTATTGA+TGG + tig0029079:25168-25187 None:intergenic 35.0%
!! AATAAGGCTGTTTCTTTGTG+TGG - tig0029079:25170-25189 Msa1440370:five_prime_UTR 35.0%
!! ATAAGGCTGTTTCTTTGTGT+GGG - tig0029079:25171-25190 Msa1440370:five_prime_UTR 35.0%
GTTTCTTTGTGTGGGAAAAA+TGG - tig0029079:25179-25198 Msa1440370:five_prime_UTR 35.0%
ATTAAAAACTTACCCTGTGC+TGG + tig0029079:25210-25229 None:intergenic 35.0%
! CATCTAAAGTCACACATGAT+CGG - tig0029079:25304-25323 Msa1440370:intron 35.0%
! TTGCATTTGTTCTTGTTGTG+TGG - tig0029079:25403-25422 Msa1440370:five_prime_UTR 35.0%
CACTGTATCACTAAAACATG+CGG + tig0029079:25645-25664 None:intergenic 35.0%
! AAATTTTCATTCCGCACAGA+AGG + tig0029079:25784-25803 None:intergenic 35.0%
! GTGCGGAATGAAAATTTTAG+TGG - tig0029079:25787-25806 Msa1440370:intron 35.0%
TTCAAATGCAAGAAAAGGAC+GGG - tig0029079:25940-25959 Msa1440370:five_prime_UTR 35.0%
TTACGTGGATTCAATTTACG+TGG + tig0029079:26113-26132 None:intergenic 35.0%
TCATGGCCAATATAGGTAAA+CGG + tig0029079:26433-26452 None:intergenic 35.0%
AACACTCTTCATATGTAGCA+TGG + tig0029079:26469-26488 None:intergenic 35.0%
TGAACAATTCCTTCCTCAAA+AGG + tig0029079:26524-26543 None:intergenic 35.0%
!! TTTTGAGGAAGGAATTGTTC+AGG - tig0029079:26523-26542 Msa1440370:five_prime_UTR 35.0%
!! GGTCTTAGTCTAAGATGTTT+TGG - tig0029079:26705-26724 Msa1440370:five_prime_UTR 35.0%
TGCTGTAATGTTACTGTACT+TGG - tig0029079:26752-26771 Msa1440370:five_prime_UTR 35.0%
GAAGAAGAGTTCAGAGAAAT+AGG - tig0029079:26928-26947 Msa1440370:intron 35.0%
!! AGTGTTAGTTGGTGTTGTAA+TGG - tig0029079:26968-26987 Msa1440370:intron 35.0%
!! GTGTTAGTTGGTGTTGTAAT+GGG - tig0029079:26969-26988 Msa1440370:intron 35.0%
!! CTTGTAACTTTGAAGCCAAA+GGG + tig0029079:27031-27050 None:intergenic 35.0%
!! TCTTGTAACTTTGAAGCCAA+AGG + tig0029079:27032-27051 None:intergenic 35.0%
GTTAACAACTCTTTGTGCAT+AGG + tig0029079:27114-27133 None:intergenic 35.0%
TGCACAAAGAGTTGTTAACT+CGG - tig0029079:27115-27134 Msa1440370:intron 35.0%
GTTTCCTAAGCAAATATGAC+CGG + tig0029079:27224-27243 None:intergenic 35.0%
ACATCGTATCAATAGACTCA+AGG + tig0029079:27254-27273 None:intergenic 35.0%
CCACAAATAAAAACAAGCAG+AGG + tig0029079:27311-27330 None:intergenic 35.0%
!!! CCTCTGCTTGTTTTTATTTG+TGG - tig0029079:27308-27327 Msa1440370:intron 35.0%
!!! CTGCTTGTTTTTATTTGTGG+AGG - tig0029079:27311-27330 Msa1440370:intron 35.0%
GGGAGCTTAAATTTGTAAAC+AGG + tig0029079:23501-23520 None:intergenic 35.0%
TAATGAGCTCTTCTGTTGTT+GGG + tig0029079:27507-27526 None:intergenic 35.0%
TTAATGAGCTCTTCTGTTGT+TGG + tig0029079:27508-27527 None:intergenic 35.0%
! AACACTAATAGTGGCATTGA+CGG + tig0029079:23708-23727 None:intergenic 35.0%
! TGTGTCGATAACACTAATAG+TGG + tig0029079:27704-27723 None:intergenic 35.0%
GTTGAAGAAAACGTTGTACT+TGG - tig0029079:27738-27757 Msa1440370:five_prime_UTR 35.0%
TACAGTCCTTGATTTCTTGA+AGG - tig0029079:27908-27927 Msa1440370:intron 35.0%
ACAGTCCTTGATTTCTTGAA+GGG - tig0029079:27909-27928 Msa1440370:intron 35.0%
AGTTACCCTTCAAGAAATCA+AGG + tig0029079:27917-27936 None:intergenic 35.0%
TCTGAAAATATCACGCCAAA+AGG + tig0029079:28167-28186 None:intergenic 35.0%
TAAGCGCGAGACTAATATTT+GGG - tig0029079:28191-28210 Msa1440370:intron 35.0%
CAATGGAGAAAGAGTCTGAA+AGG + tig0029079:18143-18162 None:intergenic 40.0%
! TCCAATCTGAAGCTCGAAAA+TGG - tig0029079:18208-18227 Msa1440370:three_prime_UTR 40.0%
CAGAGAAGAGAGCTAAAGAT+CGG + tig0029079:18255-18274 None:intergenic 40.0%
!! TAGTCGTTTTCTCTCTCACA+AGG - tig0029079:18352-18371 Msa1440370:three_prime_UTR 40.0%
!!! AGGGCCTGTTTTGTTTTGAT+TGG - tig0029079:18656-18675 Msa1440370:CDS 40.0%
GAAGCTATTCGAGAAGAAGA+GGG - tig0029079:18807-18826 Msa1440370:intron 40.0%
ATTTGACCAGATTCGACAAG+TGG - tig0029079:18830-18849 Msa1440370:intron 40.0%
CTCTGAATCTGAACAGTCTT+AGG + tig0029079:18856-18875 None:intergenic 40.0%
CTAAGACTGTTCAGATTCAG+AGG - tig0029079:18854-18873 Msa1440370:intron 40.0%
TTCAGATTCAGAGGAAGAAG+AGG - tig0029079:18863-18882 Msa1440370:intron 40.0%
!!! AGAAGAGGATTTTGAAGCAG+AGG - tig0029079:18878-18897 Msa1440370:intron 40.0%
!!! GATTTTGAAGCAGAGGTTGA+AGG - tig0029079:18885-18904 Msa1440370:intron 40.0%
! CCAAATTTCTAGACAGCTCA+AGG + tig0029079:18948-18967 None:intergenic 40.0%
CCTTGAGCTGTCTAGAAATT+TGG - tig0029079:18945-18964 Msa1440370:intron 40.0%
GCTGTCTAGAAATTTGGATG+TGG - tig0029079:18951-18970 Msa1440370:intron 40.0%
GTATGGTTTAATCAGTCTGC+AGG + tig0029079:19237-19256 None:intergenic 40.0%
! TGAGCTATCTTGATGGATGT+AGG - tig0029079:19956-19975 Msa1440370:intron 40.0%
! GAGCTATCTTGATGGATGTA+GGG - tig0029079:19957-19976 Msa1440370:intron 40.0%
! ATCTTGATGGATGTAGGGAA+AGG - tig0029079:19962-19981 Msa1440370:intron 40.0%
ACACTATGGCATGATAGAGT+TGG - tig0029079:20241-20260 Msa1440370:CDS 40.0%
!! TAGAGTTGGTGTGTGAATGT+AGG - tig0029079:20255-20274 Msa1440370:CDS 40.0%
! AACACTACCTTTTCAGCTGA+AGG - tig0029079:20504-20523 Msa1440370:intron 40.0%
ACTTGAACCTTCAGCTGAAA+AGG + tig0029079:20514-20533 None:intergenic 40.0%
ATGGTCTCAGCGAAAAAGAA+AGG + tig0029079:20576-20595 None:intergenic 40.0%
GCTTGGATATCTATTAGGCA+TGG + tig0029079:20595-20614 None:intergenic 40.0%
CCAATCGGATATTGAATGCT+TGG + tig0029079:20612-20631 None:intergenic 40.0%
CCAAGCATTCAATATCCGAT+TGG - tig0029079:20609-20628 Msa1440370:intron 40.0%
AATATCCGATTGGAAAACCC+AGG - tig0029079:20619-20638 Msa1440370:intron 40.0%
GAAAACCCAGGAGATCAAAT+AGG - tig0029079:20631-20650 Msa1440370:intron 40.0%
ACCACCACCTACTACAATAT+CGG + tig0029079:20748-20767 None:intergenic 40.0%
! ATATTGTAGTAGGTGGTGGT+GGG - tig0029079:20748-20767 Msa1440370:CDS 40.0%
GGAGAAGGTCCAAAAGAATT+AGG - tig0029079:20775-20794 Msa1440370:CDS 40.0%
ATTAGGGCCATTGTTGAAGT+TGG - tig0029079:20792-20811 Msa1440370:CDS 40.0%
!! TAGATGGTGGTGGAGAAATA+AGG - tig0029079:20835-20854 Msa1440370:exon 40.0%
! AACCATGGCCCTAATTCTTT+TGG + tig0029079:20967-20986 None:intergenic 40.0%
GGAGAAGGTCAAAAAGAATC+AGG - tig0029079:21129-21148 Msa1440370:five_prime_UTR 40.0%
GTCAAAAAGAATCAGGGCAA+TGG - tig0029079:21136-21155 Msa1440370:five_prime_UTR 40.0%
GCGAGATATTAGAAAAGCTG+AGG - tig0029079:21222-21241 Msa1440370:intron 40.0%
TGAAATGGAGCTATGAAGCA+CGG + tig0029079:21376-21395 None:intergenic 40.0%
TGCTTCATAGCTCCATTTCA+AGG - tig0029079:21376-21395 Msa1440370:intron 40.0%
! TTAGTGTGATGGCCTTGAAA+TGG + tig0029079:21391-21410 None:intergenic 40.0%
! GCTTTTACCTATATCAGGTG+TGG + tig0029079:21575-21594 None:intergenic 40.0%
AGACGAACAAACTACCAATC+TGG - tig0029079:21795-21814 Msa1440370:five_prime_UTR 40.0%
GAACACAGTTGAAACCAGAT+TGG + tig0029079:21812-21831 None:intergenic 40.0%
CTAACAACCCTCTTACTCAT+TGG - tig0029079:21878-21897 Msa1440370:five_prime_UTR 40.0%
ACAGAACCCAATGAGTAAGA+GGG + tig0029079:21888-21907 None:intergenic 40.0%
! ACTCTTAGGCTAAGAGGTTT+TGG - tig0029079:22335-22354 Msa1440370:five_prime_UTR 40.0%
!!! TAGGCTAAGAGGTTTTGGTT+TGG - tig0029079:22340-22359 Msa1440370:five_prime_UTR 40.0%
!! AGTGTTAGCTGGTGTTGTAA+TGG - tig0029079:22600-22619 Msa1440370:intron 40.0%
!! GTGTTAGCTGGTGTTGTAAT+GGG - tig0029079:22601-22620 Msa1440370:intron 40.0%
!! CTTGGAACTTTGAAGCCAAA+GGG + tig0029079:22663-22682 None:intergenic 40.0%
!! TCTTGGAACTTTGAAGCCAA+AGG + tig0029079:22664-22683 None:intergenic 40.0%
CAAAGTTCCAAGAACAAACG+GGG - tig0029079:22671-22690 Msa1440370:five_prime_UTR 40.0%
! TTTTGTTCCCCGTTTGTTCT+TGG + tig0029079:22681-22700 None:intergenic 40.0%
CATCTACAGCAAAATGGATG+TGG - tig0029079:22786-22805 Msa1440370:intron 40.0%
! AGTGAGAAGGAAAGAGGTTT+TGG - tig0029079:22816-22835 Msa1440370:intron 40.0%
! GTGAGAAGGAAAGAGGTTTT+GGG - tig0029079:22817-22836 Msa1440370:intron 40.0%
TGGGTAGTCTTTGTGATCAA+AGG - tig0029079:22836-22855 Msa1440370:intron 40.0%
GGGTAGTCTTTGTGATCAAA+GGG - tig0029079:22837-22856 Msa1440370:intron 40.0%
CGAGTTAACTCTTTGTGCAT+AGG + tig0029079:23135-23154 None:intergenic 40.0%
GAGTTAACTCGGAAAGAAAG+CGG - tig0029079:23144-23163 Msa1440370:five_prime_UTR 40.0%
GAGAACCCAACAACCTAAAA+GGG + tig0029079:23452-23471 None:intergenic 40.0%
TGAGAACCCAACAACCTAAA+AGG + tig0029079:23453-23472 None:intergenic 40.0%
TTGTTGGGTTCTCATCATCT+CGG - tig0029079:23459-23478 Msa1440370:five_prime_UTR 40.0%
AGCTCTTATGTTGTTGGGTT+GGG + tig0029079:23525-23544 None:intergenic 40.0%
AGCTGACACGTAGTGAAATA+AGG + tig0029079:23572-23591 None:intergenic 40.0%
ATTGGAGGTAGTTATGTTGG+AGG - tig0029079:23842-23861 Msa1440370:five_prime_UTR 40.0%
ACTGATCCCCTAATCATGTA+TGG - tig0029079:23942-23961 Msa1440370:five_prime_UTR 40.0%
TGGTTGCCATACATGATTAG+GGG + tig0029079:23951-23970 None:intergenic 40.0%
!!! TTGTTTTTGGAGATCCACAC+AGG - tig0029079:24011-24030 Msa1440370:five_prime_UTR 40.0%
GTCATTTGATGTTTCCTGTG+TGG + tig0029079:24028-24047 None:intergenic 40.0%
! GACATGTAGGTAGGTTTTTC+TGG - tig0029079:24045-24064 Msa1440370:intron 40.0%
ACCGAGCCAAAATTCATAAC+TGG - tig0029079:24228-24247 Msa1440370:intron 40.0%
!!! GCCAGTTATGAATTTTGGCT+CGG + tig0029079:24232-24251 None:intergenic 40.0%
AATAGAAAGCCCGCAACAAA+TGG - tig0029079:24537-24556 Msa1440370:intron 40.0%
! TCAAGCTTTCCATTTGTTGC+GGG + tig0029079:24549-24568 None:intergenic 40.0%
! CTCAAGCTTTCCATTTGTTG+CGG + tig0029079:24550-24569 None:intergenic 40.0%
CTTGAGACTTATCGAAATGG+AGG - tig0029079:24564-24583 Msa1440370:intron 40.0%
GAAGAAGTTGTGCATACATC+TGG - tig0029079:24591-24610 Msa1440370:intron 40.0%
ACTCTTCATCAGCAATTAGG+TGG + tig0029079:24694-24713 None:intergenic 40.0%
GAGTTATCTGCCTTCACAAA+AGG + tig0029079:24843-24862 None:intergenic 40.0%
! TCGACTTCTAGAAACTATGG+TGG - tig0029079:24861-24880 Msa1440370:five_prime_UTR 40.0%
TCTAGAAACTATGGTGGTAC+CGG - tig0029079:24867-24886 Msa1440370:five_prime_UTR 40.0%
ACTGATACTCAAACCAATGC+CGG + tig0029079:24889-24908 None:intergenic 40.0%
TAAGTGCCTAGCTGAACTAA+TGG - tig0029079:24908-24927 Msa1440370:five_prime_UTR 40.0%
AAGTGCCTAGCTGAACTAAT+GGG - tig0029079:24909-24928 Msa1440370:five_prime_UTR 40.0%
!! GAAAAGGTACTTCCAATCTG+TGG + tig0029079:24960-24979 None:intergenic 40.0%
TCCAATAACTGAGGTGAAGA+AGG - tig0029079:25013-25032 Msa1440370:five_prime_UTR 40.0%
ACCTTCTTCACCTCAGTTAT+TGG + tig0029079:25017-25036 None:intergenic 40.0%
!! GATCTACCATCCAGTTTTAG+AGG - tig0029079:25047-25066 Msa1440370:five_prime_UTR 40.0%
!! GGCTTTAAACCCTCTAAAAC+TGG + tig0029079:25060-25079 None:intergenic 40.0%
! TTTAAAGCCGTTGTGGTTGA+TGG - tig0029079:25071-25090 Msa1440370:five_prime_UTR 40.0%
TTAAAGCCGTTGTGGTTGAT+GGG - tig0029079:25072-25091 Msa1440370:five_prime_UTR 40.0%
GTATCCCAAGTCTCTTCAAA+TGG + tig0029079:25127-25146 None:intergenic 40.0%
CGATCATGTGTGACTTTAGA+TGG + tig0029079:25306-25325 None:intergenic 40.0%
GAGAAAGATTCATGGGTTTG+TGG - tig0029079:25502-25521 Msa1440370:five_prime_UTR 40.0%
CAAACTGAAGTTGAACCATC+AGG + tig0029079:25758-25777 None:intergenic 40.0%
! TGCCTTGAAAAACTTTGGAG+CGG - tig0029079:25836-25855 Msa1440370:intron 40.0%
! ATCCGCTCCAAAGTTTTTCA+AGG + tig0029079:25841-25860 None:intergenic 40.0%
AGCAAGCATCAAACTTGTGA+GGG + tig0029079:25911-25930 None:intergenic 40.0%
AAGCAAGCATCAAACTTGTG+AGG + tig0029079:25912-25931 None:intergenic 40.0%
CAAGTTTGATGCTTGCTTCA+AGG - tig0029079:25914-25933 Msa1440370:intron 40.0%
! AATCCACGTAACTTGCATGT+TGG - tig0029079:26122-26141 Msa1440370:five_prime_UTR 40.0%
TTGAAGCAACTCGTCGAATT+CGG - tig0029079:26345-26364 Msa1440370:five_prime_UTR 40.0%
CGAATGGTGAATGTAGTGAA+AGG - tig0029079:26396-26415 Msa1440370:five_prime_UTR 40.0%
! ATGGATTACATCTGCTGTCA+TGG + tig0029079:26450-26469 None:intergenic 40.0%
! AGAGTGTTTGAAATGTGGGA+TGG - tig0029079:26481-26500 Msa1440370:five_prime_UTR 40.0%
! TGTTTGAAATGTGGGATGGA+TGG - tig0029079:26485-26504 Msa1440370:five_prime_UTR 40.0%
!! GTCTCAAAACCTTTTGAGGA+AGG - tig0029079:26512-26531 Msa1440370:five_prime_UTR 40.0%
TTGTTAACTCGGAAAGAGAG+CGG - tig0029079:27126-27145 Msa1440370:intron 40.0%
GAGTCTATTGATACGATGTC+TGG - tig0029079:27255-27274 Msa1440370:intron 40.0%
TATTGATACGATGTCTGGAG+AGG - tig0029079:27260-27279 Msa1440370:intron 40.0%
! GAGCTCTCAGTATGTTTTCT+CGG + tig0029079:27381-27400 None:intergenic 40.0%
! AACAACCTAAAAGGGCTAGT+CGG + tig0029079:27421-27440 None:intergenic 40.0%
!!! ACTAGCCCTTTTAGGTTGTT+GGG - tig0029079:27421-27440 Msa1440370:intron 40.0%
GAGAACCCAACAACCTAAAA+GGG + tig0029079:23452-23471 None:intergenic 40.0%
TGAGAACCCAACAACCTAAA+AGG + tig0029079:23453-23472 None:intergenic 40.0%
TTGTTGGGTTCTCATCATCT+CGG - tig0029079:23459-23478 Msa1440370:five_prime_UTR 40.0%
AGCTCATTAAAGTGACTGCA+GGG - tig0029079:27518-27537 Msa1440370:five_prime_UTR 40.0%
AGAAGACAATGCAAACTGCA+GGG + tig0029079:27849-27868 None:intergenic 40.0%
CATTCTGGCCATCAAAAAGT+CGG + tig0029079:27995-28014 None:intergenic 40.0%
!! ACTTTTTGATGGCCAGAATG+CGG - tig0029079:27995-28014 Msa1440370:intron 40.0%
AATGCGGAGTTTAGCACATA+CGG - tig0029079:28011-28030 Msa1440370:intron 40.0%
!! TTGACTCCAACTTTCAGGTT+GGG + tig0029079:28125-28144 None:intergenic 40.0%
! TTTGACTCCAACTTTCAGGT+TGG + tig0029079:28126-28145 None:intergenic 40.0%
CTAAGCGCGAGACTAATATT+TGG - tig0029079:28190-28209 Msa1440370:intron 40.0%
ATTTCCAATGATCGGCATTG+GGG + tig0029079:28486-28505 None:intergenic 40.0%
GATTTCCAATGATCGGCATT+GGG + tig0029079:28487-28506 None:intergenic 40.0%
TGATTTCCAATGATCGGCAT+TGG + tig0029079:28488-28507 None:intergenic 40.0%
GAAGAGCGGAAAAATCGCAA+TGG + tig0029079:18190-18209 None:intergenic 45.0%
!! GCCATTTTCGAGCTTCAGAT+TGG + tig0029079:18212-18231 None:intergenic 45.0%
ATGGCAATTGAAGCTCGTTG+AGG - tig0029079:18227-18246 Msa1440370:three_prime_UTR 45.0%
TTGCTATCTCAGGTCCTGTT+TGG - tig0029079:18554-18573 Msa1440370:three_prime_UTR 45.0%
GGAAGCTATTCGAGAAGAAG+AGG - tig0029079:18806-18825 Msa1440370:intron 45.0%
CATGGTTTGATCAGTCTGCA+AGG + tig0029079:19894-19913 None:intergenic 45.0%
CTCTATCATGCCATAGTGTG+TGG + tig0029079:20240-20259 None:intergenic 45.0%
TTATAGAGGGAATCACGCGT+GGG + tig0029079:20445-20464 None:intergenic 45.0%
TTTATAGAGGGAATCACGCG+TGG + tig0029079:20446-20465 None:intergenic 45.0%
! GATCTCCTGGGTTTTCCAAT+CGG + tig0029079:20627-20646 None:intergenic 45.0%
AGGATTAGAGTTCGATGCGA+TGG - tig0029079:20651-20670 Msa1440370:intron 45.0%
!! ATGACGGATGGTGTTGAAGT+TGG - tig0029079:20681-20700 Msa1440370:intron 45.0%
AGGAGGACCGATATTGTAGT+AGG - tig0029079:20738-20757 Msa1440370:CDS 45.0%
AGGACCGATATTGTAGTAGG+TGG - tig0029079:20741-20760 Msa1440370:CDS 45.0%
ACCGATATTGTAGTAGGTGG+TGG - tig0029079:20744-20763 Msa1440370:CDS 45.0%
! GATATTGTAGTAGGTGGTGG+TGG - tig0029079:20747-20766 Msa1440370:CDS 45.0%
! TATTGTAGTAGGTGGTGGTG+GGG - tig0029079:20749-20768 Msa1440370:CDS 45.0%
!! TGGTGGTGGAGAAATAAGGA+TGG - tig0029079:20839-20858 Msa1440370:exon 45.0%
GGTGGAGAAATAAGGATGGA+TGG - tig0029079:20843-20862 Msa1440370:five_prime_UTR 45.0%
! AGGATGGATGGTGTTGAAGT+TGG - tig0029079:20855-20874 Msa1440370:five_prime_UTR 45.0%
! ATGGATGGTGTTGAAGTTGG+CGG - tig0029079:20858-20877 Msa1440370:five_prime_UTR 45.0%
AGGAGGACAGATGGTGTAAT+AGG - tig0029079:20918-20937 Msa1440370:five_prime_UTR 45.0%
AGGACAGATGGTGTAATAGG+TGG - tig0029079:20921-20940 Msa1440370:five_prime_UTR 45.0%
ACAGATGGTGTAATAGGTGG+TGG - tig0029079:20924-20943 Msa1440370:five_prime_UTR 45.0%
! ATGGTGTAATAGGTGGTGGT+GGG - tig0029079:20928-20947 Msa1440370:five_prime_UTR 45.0%
GTCCAAAAGAATTAGGGCCA+TGG - tig0029079:20782-20801 Msa1440370:CDS 45.0%
ATTAGGGCCATGGTTGAAGT+TGG - tig0029079:20972-20991 Msa1440370:five_prime_UTR 45.0%
!! TAGATGGTGGTGGAGAAATG+AGG - tig0029079:21015-21034 Msa1440370:five_prime_UTR 45.0%
! AGGATGGATGGTGTTGAAGT+TGG - tig0029079:20855-20874 Msa1440370:five_prime_UTR 45.0%
! ATGGATGGTGTTGAAGTTGG+CGG - tig0029079:20858-20877 Msa1440370:five_prime_UTR 45.0%
ACCACCATCTACAACTCCAT+CGG + tig0029079:21102-21121 None:intergenic 45.0%
ATCAGGGCAATGGATGAAGT+TGG - tig0029079:21146-21165 Msa1440370:five_prime_UTR 45.0%
TGTGTCTGACACGACACTTA+TGG + tig0029079:21326-21345 None:intergenic 45.0%
! GTGCGGCTTTTACCTATATC+AGG + tig0029079:21580-21599 None:intergenic 45.0%
AATCGATCGGAGAGTTCTAC+CGG + tig0029079:21647-21666 None:intergenic 45.0%
GATCTGCACCTTTCTCTTTC+TGG + tig0029079:21774-21793 None:intergenic 45.0%
CACAGAACCCAATGAGTAAG+AGG + tig0029079:21889-21908 None:intergenic 45.0%
!!! AAAGACTGGTTTTGCGCCTA+GGG - tig0029079:22002-22021 Msa1440370:five_prime_UTR 45.0%
GAGTACTAATCATGCTCCCT+AGG + tig0029079:22021-22040 None:intergenic 45.0%
CCTCTTAGCCTAAGAGTCTT+AGG + tig0029079:22332-22351 None:intergenic 45.0%
CCTAAGACTCTTAGGCTAAG+AGG - tig0029079:22329-22348 Msa1440370:five_prime_UTR 45.0%
TCATTCAAGCACATAGAGCC+CGG - tig0029079:22710-22729 Msa1440370:five_prime_UTR 45.0%
AATGGCAGAAGGGTTTCTGT+AGG + tig0029079:22921-22940 None:intergenic 45.0%
AAACCTGGTCAATGGCAGAA+GGG + tig0029079:22931-22950 None:intergenic 45.0%
TCAAGCACAAACCTGGTCAA+TGG + tig0029079:22939-22958 None:intergenic 45.0%
! CTTTTGCCGAATATACGGCT+AGG - tig0029079:23075-23094 Msa1440370:intron 45.0%
GTTTGAGAAGCAGCATAGAG+TGG - tig0029079:23166-23185 Msa1440370:five_prime_UTR 45.0%
AATGGAAAGAGAGGCTTCAC+AGG - tig0029079:23199-23218 Msa1440370:five_prime_UTR 45.0%
AAAGAGAGGCTTCACAGGTT+AGG - tig0029079:23204-23223 Msa1440370:five_prime_UTR 45.0%
AAGAGAGGCTTCACAGGTTA+GGG - tig0029079:23205-23224 Msa1440370:five_prime_UTR 45.0%
GTTTCCTGAGCAAATGTGAC+AGG + tig0029079:23242-23261 None:intergenic 45.0%
AGCAGTGGAATGGTTCACAA+GGG + tig0029079:23315-23334 None:intergenic 45.0%
AAGCAGTGGAATGGTTCACA+AGG + tig0029079:23316-23335 None:intergenic 45.0%
!!! CATTTCTGGCTAGCCCTTTT+AGG - tig0029079:23436-23455 Msa1440370:five_prime_UTR 45.0%
!!! GCTAGCCCTTTTAGGTTGTT+GGG - tig0029079:23444-23463 Msa1440370:five_prime_UTR 45.0%
!! CTTATGTTGTTGGGTTGGGA+GGG + tig0029079:23521-23540 None:intergenic 45.0%
!! TCTTATGTTGTTGGGTTGGG+AGG + tig0029079:23522-23541 None:intergenic 45.0%
GAGCTCTTATGTTGTTGGGT+TGG + tig0029079:23526-23545 None:intergenic 45.0%
AGCTCATTAAAGCGACCACA+GGG - tig0029079:23541-23560 Msa1440370:five_prime_UTR 45.0%
TAGAGGATGAAGGTCGTGTT+TGG - tig0029079:23633-23652 Msa1440370:intron 45.0%
TGTTGGAGGATCCTTTGATG+TGG - tig0029079:23856-23875 Msa1440370:five_prime_UTR 45.0%
GAATTGAACTCAACCCAACG+TGG - tig0029079:24143-24162 Msa1440370:intron 45.0%
GGCAACTCTGTTGAAGTAAG+TGG - tig0029079:24316-24335 Msa1440370:intron 45.0%
GAAGTTGTGCATACATCTGG+CGG - tig0029079:24594-24613 Msa1440370:intron 45.0%
TGTGTCGAAGACACTGGAAT+TGG - tig0029079:24783-24802 Msa1440370:five_prime_UTR 45.0%
TTTATAAGCCGGCCACAGAT+TGG - tig0029079:24945-24964 Msa1440370:five_prime_UTR 45.0%
! TAGAGGGTTTAAAGCCGTTG+TGG - tig0029079:25064-25083 Msa1440370:five_prime_UTR 45.0%
AGGTTTCCCATCAACCACAA+CGG + tig0029079:25081-25100 None:intergenic 45.0%
AGTCGCAAACGCCATCAATA+AGG - tig0029079:25154-25173 Msa1440370:five_prime_UTR 45.0%
AAAAATGGTGCTTCCAGCAC+AGG - tig0029079:25194-25213 Msa1440370:five_prime_UTR 45.0%
AAAATGGTGCTTCCAGCACA+GGG - tig0029079:25195-25214 Msa1440370:five_prime_UTR 45.0%
AGATTCATGGGTTTGTGGAG+AGG - tig0029079:25507-25526 Msa1440370:five_prime_UTR 45.0%
GTAGCAAGAAGGATCATTCG+AGG + tig0029079:25587-25606 None:intergenic 45.0%
GAAGCCACTGAGAACTAGTA+TGG - tig0029079:25670-25689 Msa1440370:intron 45.0%
CCACTGAGAACTAGTATGGT+GGG - tig0029079:25674-25693 Msa1440370:intron 45.0%
! AGCTTGCCTTCAGCAAGTTT+TGG - tig0029079:25697-25716 Msa1440370:intron 45.0%
! GCTTGCCTTCAGCAAGTTTT+GGG - tig0029079:25698-25717 Msa1440370:intron 45.0%
!! CTGTTCCCAAAACTTGCTGA+AGG + tig0029079:25706-25725 None:intergenic 45.0%
!!! CTTCAGCAAGTTTTGGGAAC+AGG - tig0029079:25704-25723 Msa1440370:intron 45.0%
! TCAGTTTGAAGCCTTCTGTG+CGG - tig0029079:25770-25789 Msa1440370:intron 45.0%
ATGTCAATGGAAGTGACTGC+AGG - tig0029079:25813-25832 Msa1440370:intron 45.0%
GCAGGTGCCTTGAAAAACTT+TGG - tig0029079:25831-25850 Msa1440370:intron 45.0%
TAGCCAACATGCAAGTTACG+TGG + tig0029079:26128-26147 None:intergenic 45.0%
TGAAGCAACTCGTCGAATTC+GGG - tig0029079:26346-26365 Msa1440370:five_prime_UTR 45.0%
TCTGCTGTCATGGCCAATAT+AGG + tig0029079:26440-26459 None:intergenic 45.0%
!! GTAACTTTGAAGCCAAAGGG+TGG + tig0029079:27028-27047 None:intergenic 45.0%
! CTTTTGCAGAATATGCGGCT+AGG - tig0029079:27054-27073 Msa1440370:intron 45.0%
GTTTGAGAAGCAGCATAGAG+TGG - tig0029079:23166-23185 Msa1440370:five_prime_UTR 45.0%
AATGGAAAGAGAGGCTTCAC+AGG - tig0029079:23199-23218 Msa1440370:five_prime_UTR 45.0%
AAAGAGAGGCTTCACAGGTT+AGG - tig0029079:23204-23223 Msa1440370:five_prime_UTR 45.0%
AAGAGAGGCTTCACAGGTTA+GGG - tig0029079:23205-23224 Msa1440370:five_prime_UTR 45.0%
! TGCACCGGTCATATTTGCTT+AGG - tig0029079:27217-27236 Msa1440370:intron 45.0%
AACATACTGAGAGCTCCTAC+TGG - tig0029079:27385-27404 Msa1440370:intron 45.0%
ACATACTGAGAGCTCCTACT+GGG - tig0029079:27386-27405 Msa1440370:intron 45.0%
!! TTGTTCCGACTAGCCCTTTT+AGG - tig0029079:27413-27432 Msa1440370:intron 45.0%
!!! GACTAGCCCTTTTAGGTTGT+TGG - tig0029079:27420-27439 Msa1440370:intron 45.0%
AGCTCTTCTGTTGTTGGGTT+GGG + tig0029079:27502-27521 None:intergenic 45.0%
GAGCTCATTAAAGTGACTGC+AGG - tig0029079:27517-27536 Msa1440370:five_prime_UTR 45.0%
GAAGACAATGCAAACTGCAG+GGG + tig0029079:27848-27867 None:intergenic 45.0%
GAGAAGACAATGCAAACTGC+AGG + tig0029079:27850-27869 None:intergenic 45.0%
TGTCAGGGAAACATTGCTGA+AGG - tig0029079:27958-27977 Msa1440370:intron 45.0%
ATGTGCTAAACTCCGCATTC+TGG + tig0029079:28010-28029 None:intergenic 45.0%
ATGCGGAGTTTAGCACATAC+GGG - tig0029079:28012-28031 Msa1440370:intron 45.0%
GCTTCTACGGGTAATGTTGT+GGG - tig0029079:28040-28059 Msa1440370:intron 45.0%
CTTCTACGGGTAATGTTGTG+GGG - tig0029079:28041-28060 Msa1440370:intron 45.0%
! GCATGACGACTTGGATTTCA+TGG - tig0029079:28063-28082 Msa1440370:intron 45.0%
AAAACCCCAATGCCGATCAT+TGG - tig0029079:28479-28498 Msa1440370:five_prime_UTR 45.0%
CGAGCTTCAGATTGGAAGAG+CGG + tig0029079:18204-18223 None:intergenic 50.0%
CTTAGGCCACTTGTCGAATC+TGG + tig0029079:18839-18858 None:intergenic 50.0%
ATGCGATGGCGAAAGGATGA+CGG - tig0029079:20665-20684 Msa1440370:intron 50.0%
! ACGGATGGTGTTGAAGTTGG+CGG - tig0029079:20684-20703 Msa1440370:intron 50.0%
AGGGCCATTGTTGAAGTTGG+TGG - tig0029079:20795-20814 Msa1440370:CDS 50.0%
!! GCCATTGTTGAAGTTGGTGG+CGG - tig0029079:20798-20817 Msa1440370:CDS 50.0%
ACCGCCACCAACTTCAACAA+TGG + tig0029079:20802-20821 None:intergenic 50.0%
!! ATTGTTGAAGTTGGTGGCGG+TGG - tig0029079:20801-20820 Msa1440370:CDS 50.0%
! AATGAGGCTGTAGATGGTGG+TGG - tig0029079:20825-20844 Msa1440370:exon 50.0%
! GATGGTGTAATAGGTGGTGG+TGG - tig0029079:20927-20946 Msa1440370:five_prime_UTR 50.0%
! TGGTGTAATAGGTGGTGGTG+GGG - tig0029079:20929-20948 Msa1440370:five_prime_UTR 50.0%
!! TAATAGGTGGTGGTGGGGAA+AGG - tig0029079:20934-20953 Msa1440370:five_prime_UTR 50.0%
! AATGAGGCTGTAGATGGTGG+TGG - tig0029079:20825-20844 Msa1440370:exon 50.0%
!! TGGTGGTGGAGAAATGAGGA+TGG - tig0029079:21019-21038 Msa1440370:five_prime_UTR 50.0%
GGTGGAGAAATGAGGATGGA+TGG - tig0029079:21023-21042 Msa1440370:five_prime_UTR 50.0%
AGGACCGATGGAGTTGTAGA+TGG - tig0029079:21095-21114 Msa1440370:five_prime_UTR 50.0%
ACCGATGGAGTTGTAGATGG+TGG - tig0029079:21098-21117 Msa1440370:five_prime_UTR 50.0%
! GATGGAGTTGTAGATGGTGG+TGG - tig0029079:21101-21120 Msa1440370:five_prime_UTR 50.0%
!! TTGTAGATGGTGGTGGCGAA+AGG - tig0029079:21108-21127 Msa1440370:five_prime_UTR 50.0%
AGGGCAATGGATGAAGTTGG+TGG - tig0029079:21149-21168 Msa1440370:five_prime_UTR 50.0%
!! ATGGATGAAGTTGGTGGCGA+TGG - tig0029079:21155-21174 Msa1440370:five_prime_UTR 50.0%
GTTGGCGATGGAGATGTACA+TGG - tig0029079:21191-21210 Msa1440370:intron 50.0%
GGAGATGTACATGGTGGTTG+TGG - tig0029079:21200-21219 Msa1440370:intron 50.0%
! AAGTGTCGTGTCAGACACAC+CGG - tig0029079:21327-21346 Msa1440370:intron 50.0%
TATGAAGCACGGACACTCCT+CGG + tig0029079:21365-21384 None:intergenic 50.0%
! GATTTAGCGGAGGCTTTGTG+CGG + tig0029079:21597-21616 None:intergenic 50.0%
CGAGGACATCACGGATTTAG+CGG + tig0029079:21610-21629 None:intergenic 50.0%
!!! CAAAGACTGGTTTTGCGCCT+AGG - tig0029079:22001-22020 Msa1440370:five_prime_UTR 50.0%
GCAAAATCAGCACCACCCTT+TGG - tig0029079:22645-22664 Msa1440370:intron 50.0%
!! GGAACTTTGAAGCCAAAGGG+TGG + tig0029079:22660-22679 None:intergenic 50.0%
GGATGGCTAGAGCATGAACA+TGG + tig0029079:22900-22919 None:intergenic 50.0%
GCAGAAGGGTTTCTGTAGGA+TGG + tig0029079:22917-22936 None:intergenic 50.0%
AAACCCTTCTGCCATTGACC+AGG - tig0029079:22925-22944 Msa1440370:intron 50.0%
CAAACCTGGTCAATGGCAGA+AGG + tig0029079:22932-22951 None:intergenic 50.0%
AGCGGTCCTAGCCGTATATT+CGG + tig0029079:23084-23103 None:intergenic 50.0%
TGCACCTGTCACATTTGCTC+AGG - tig0029079:23235-23254 Msa1440370:five_prime_UTR 50.0%
!!! GGCTAGCCCTTTTAGGTTGT+TGG - tig0029079:23443-23462 Msa1440370:five_prime_UTR 50.0%
GAGCTCATTAAAGCGACCAC+AGG - tig0029079:23540-23559 Msa1440370:five_prime_UTR 50.0%
CACAAGGGACTCCACATCAA+AGG + tig0029079:23870-23889 None:intergenic 50.0%
CTTTGATGTGGAGTCCCTTG+TGG - tig0029079:23868-23887 Msa1440370:five_prime_UTR 50.0%
AGTCTGAGCATAGCCACGTT+GGG + tig0029079:24159-24178 None:intergenic 50.0%
TCTTCGACACAGACCCATCT+AGG + tig0029079:24774-24793 None:intergenic 50.0%
!! AACTATGGTGGTACCGGCAT+TGG - tig0029079:24873-24892 Msa1440370:five_prime_UTR 50.0%
TGCCTAGCTGAACTAATGGG+CGG - tig0029079:24912-24931 Msa1440370:five_prime_UTR 50.0%
AGGTACTTCCAATCTGTGGC+CGG + tig0029079:24956-24975 None:intergenic 50.0%
! CTAGTCACAGCAGCTCTAAC+AGG + tig0029079:25101-25120 None:intergenic 50.0%
TCATGGGTTTGTGGAGAGGA+CGG - tig0029079:25511-25530 Msa1440370:five_prime_UTR 50.0%
TGCGGCAACTGGAAACAGAA+CGG - tig0029079:25545-25564 Msa1440370:five_prime_UTR 50.0%
GCCACTGAGAACTAGTATGG+TGG - tig0029079:25673-25692 Msa1440370:intron 50.0%
! CCCACCATACTAGTTCTCAG+TGG + tig0029079:25677-25696 None:intergenic 50.0%
AACAGGCAAGAAGAGACAGC+CGG - tig0029079:25721-25740 Msa1440370:intron 50.0%
! CCATCAGGCATCTCTTTTCC+CGG + tig0029079:25743-25762 None:intergenic 50.0%
GATGTGAAGTGTGCAGACAG+CGG - tig0029079:25858-25877 Msa1440370:intron 50.0%
AACTCGTCGAATTCGGGAGA+TGG - tig0029079:26352-26371 Msa1440370:five_prime_UTR 50.0%
AATTCGGGAGATGGAGAGGA+CGG - tig0029079:26361-26380 Msa1440370:five_prime_UTR 50.0%
GCAAAATCAGCACCACCCTT+TGG - tig0029079:22645-22664 Msa1440370:intron 50.0%
GGTTAGGGATGAGTATGCAC+CGG - tig0029079:23220-23239 Msa1440370:five_prime_UTR 50.0%
GTCGGAACAAACTTCCCAGT+AGG + tig0029079:27403-27422 None:intergenic 50.0%
!! CTTCTGTTGTTGGGTTGGGA+GGG + tig0029079:27498-27517 None:intergenic 50.0%
!! TCTTCTGTTGTTGGGTTGGG+AGG + tig0029079:27499-27518 None:intergenic 50.0%
GAGCTCTTCTGTTGTTGGGT+TGG + tig0029079:27503-27522 None:intergenic 50.0%
TGCGGAGTTTAGCACATACG+GGG - tig0029079:28013-28032 Msa1440370:intron 50.0%
AGTTTAGCACATACGGGGAC+TGG - tig0029079:28018-28037 Msa1440370:intron 50.0%
GGCTTCTACGGGTAATGTTG+TGG - tig0029079:28039-28058 Msa1440370:intron 50.0%
ATCTAGACTCCGACACGTTC+CGG - tig0029079:28095-28114 Msa1440370:intron 50.0%
!! AACTTTCAGGTTGGGTCTGC+CGG + tig0029079:28117-28136 None:intergenic 50.0%
ACTATTGCTGCTGTGCTCGT+TGG - tig0029079:28215-28234 Msa1440370:intron 50.0%
GAGTTCGATGCGATGGCGAA+AGG - tig0029079:20658-20677 Msa1440370:intron 55.0%
!! GATGGCGAAAGGATGACGGA+TGG - tig0029079:20669-20688 Msa1440370:intron 55.0%
! GATGGTGTTGAAGTTGGCGG+TGG - tig0029079:20687-20706 Msa1440370:intron 55.0%
!! TAGTAGGTGGTGGTGGGGAA+AGG - tig0029079:20754-20773 Msa1440370:CDS 55.0%
GGTGGCAATGAGGCTGTAGA+TGG - tig0029079:20819-20838 Msa1440370:CDS 55.0%
GGCAATGAGGCTGTAGATGG+TGG - tig0029079:20822-20841 Msa1440370:exon 55.0%
! GATGGTGTTGAAGTTGGCGG+TGG - tig0029079:20687-20706 Msa1440370:intron 55.0%
AGGGCCATGGTTGAAGTTGG+TGG - tig0029079:20975-20994 Msa1440370:five_prime_UTR 55.0%
!! GCCATGGTTGAAGTTGGTGG+CGG - tig0029079:20978-20997 Msa1440370:five_prime_UTR 55.0%
ACCGCCACCAACTTCAACCA+TGG + tig0029079:20982-21001 None:intergenic 55.0%
!! ATGGTTGAAGTTGGTGGCGG+TGG - tig0029079:20981-21000 Msa1440370:five_prime_UTR 55.0%
GGTGGCAATGAGGCTGTAGA+TGG - tig0029079:20819-20838 Msa1440370:CDS 55.0%
GGCAATGAGGCTGTAGATGG+TGG - tig0029079:20822-20841 Msa1440370:exon 55.0%
! GATGGTGTTGAAGTTGGCGG+TGG - tig0029079:20687-20706 Msa1440370:intron 55.0%
!! ATGGTGGTGGCGAAAGGAGA+AGG - tig0029079:21114-21133 Msa1440370:five_prime_UTR 55.0%
!! GATGAAGTTGGTGGCGATGG+CGG - tig0029079:21158-21177 Msa1440370:five_prime_UTR 55.0%
GGCGATGGAGATGTACATGG+TGG - tig0029079:21194-21213 Msa1440370:intron 55.0%
AGTGTCGTGTCAGACACACC+GGG - tig0029079:21328-21347 Msa1440370:intron 55.0%
GTGACGGCCACACCTGATAT+AGG - tig0029079:21565-21584 Msa1440370:five_prime_UTR 55.0%
GGACATCACGGATTTAGCGG+AGG + tig0029079:21607-21626 None:intergenic 55.0%
CCATTGCGACGAGGACATCA+CGG + tig0029079:21619-21638 None:intergenic 55.0%
TGATGTCCTCGTCGCAATGG+CGG - tig0029079:21619-21638 Msa1440370:five_prime_UTR 55.0%
GGCTGTTGAGAGAAGGGAGA+AGG - tig0029079:22075-22094 Msa1440370:five_prime_UTR 55.0%
TGTGCATAGGCCACTCCACT+CGG + tig0029079:23122-23141 None:intergenic 55.0%
GGGTTCTCATCATCTCGGTG+TGG - tig0029079:23464-23483 Msa1440370:five_prime_UTR 55.0%
CAGTCTGAGCATAGCCACGT+TGG + tig0029079:24160-24179 None:intergenic 55.0%
CTCAGACTGCTCAAGCGTGT+GGG - tig0029079:24171-24190 Msa1440370:intron 55.0%
TGGGTCTGTGTCGAAGACAC+TGG - tig0029079:24777-24796 Msa1440370:five_prime_UTR 55.0%
GACCGCCCATTAGTTCAGCT+AGG + tig0029079:24917-24936 None:intergenic 55.0%
CATGGGTTTGTGGAGAGGAC+GGG - tig0029079:25512-25531 Msa1440370:five_prime_UTR 55.0%
AGGACGGGATCTTCAGTGTG+CGG - tig0029079:25527-25546 Msa1440370:five_prime_UTR 55.0%
GATCTTCAGTGTGCGGCAAC+TGG - tig0029079:25534-25553 Msa1440370:five_prime_UTR 55.0%
ACAGGCAAGAAGAGACAGCC+GGG - tig0029079:25722-25741 Msa1440370:intron 55.0%
CCGGGAAAAGAGATGCCTGA+TGG - tig0029079:25740-25759 Msa1440370:intron 55.0%
GTCGAATTCGGGAGATGGAG+AGG - tig0029079:26357-26376 Msa1440370:five_prime_UTR 55.0%
ACGGCGAATGAGGAGACGAA+TGG - tig0029079:26380-26399 Msa1440370:five_prime_UTR 55.0%
TGTGCATAGGCCACTCCACT+CGG + tig0029079:23122-23141 None:intergenic 55.0%
GGGTTCTCATCATCTCGGTG+TGG - tig0029079:23464-23483 Msa1440370:five_prime_UTR 55.0%
!! CATACGGGGACTGGCTTCTA+CGG - tig0029079:28027-28046 Msa1440370:intron 55.0%
!! ATACGGGGACTGGCTTCTAC+GGG - tig0029079:28028-28047 Msa1440370:intron 55.0%
TGTTGTGGGGCATGACGACT+TGG - tig0029079:28054-28073 Msa1440370:intron 55.0%
GGCAGACCCAACCTGAAAGT+TGG - tig0029079:28116-28135 Msa1440370:intron 55.0%
!!! GCTGTGCTCGTTGGCTCTTT+TGG - tig0029079:28224-28243 Msa1440370:intron 55.0%
GTTGAAGTTGGCGGTGGCAC+CGG - tig0029079:20693-20712 Msa1440370:CDS 60.0%
!! CTGAAGGTGGTGGTGGCGAA+AGG - tig0029079:20718-20737 Msa1440370:CDS 60.0%
!! AAGGTGGTGGTGGCGAAAGG+AGG - tig0029079:20721-20740 Msa1440370:CDS 60.0%
!! GTGGTGGTGGGGAAAGGAGA+AGG - tig0029079:20760-20779 Msa1440370:CDS 60.0%
!! AGTTGGTGGCGGTGGCAATG+AGG - tig0029079:20809-20828 Msa1440370:CDS 60.0%
! GGTGTTGAAGTTGGCGGTGG+CGG - tig0029079:20690-20709 Msa1440370:intron 60.0%
! ACCAGAGCTGAAGGTGGTGG+TGG - tig0029079:20891-20910 Msa1440370:five_prime_UTR 60.0%
!! CTGAAGGTGGTGGTGGCGAA+AGG - tig0029079:20718-20737 Msa1440370:CDS 60.0%
!! AAGGTGGTGGTGGCGAAAGG+AGG - tig0029079:20721-20740 Msa1440370:CDS 60.0%
GGTGGCGAAAGGAGGACAGA+TGG - tig0029079:20909-20928 Msa1440370:five_prime_UTR 60.0%
!! AGTTGGTGGCGGTGGCAATG+AGG - tig0029079:20809-20828 Msa1440370:CDS 60.0%
GTTGAAGTTGGCGGTGGCAC+CGG - tig0029079:20693-20712 Msa1440370:CDS 60.0%
!! CTGAAGGTGGTGGAGGGGAA+AGG - tig0029079:21072-21091 Msa1440370:five_prime_UTR 60.0%
!! AAGGTGGTGGAGGGGAAAGG+AGG - tig0029079:21075-21094 Msa1440370:five_prime_UTR 60.0%
! ACGGACACTCCTCGGATTGG+GGG + tig0029079:21357-21376 None:intergenic 60.0%
CACGGACACTCCTCGGATTG+GGG + tig0029079:21358-21377 None:intergenic 60.0%
GCACGGACACTCCTCGGATT+GGG + tig0029079:21359-21378 None:intergenic 60.0%
AGCACGGACACTCCTCGGAT+TGG + tig0029079:21360-21379 None:intergenic 60.0%
CCGTGATGTCCTCGTCGCAA+TGG - tig0029079:21616-21635 Msa1440370:five_prime_UTR 60.0%
CGGCTAGGACCGCTTTCGAA+AGG - tig0029079:23090-23109 Msa1440370:five_prime_UTR 60.0%
! CGGTAGCGGCCTTTCGAAAG+CGG + tig0029079:23102-23121 None:intergenic 60.0%
TTCGAAAGGCCGCTACCGAG+TGG - tig0029079:23104-23123 Msa1440370:five_prime_UTR 60.0%
TAGGCCACTCCACTCGGTAG+CGG + tig0029079:23116-23135 None:intergenic 60.0%
GCTCAGACTGCTCAAGCGTG+TGG - tig0029079:24170-24189 Msa1440370:intron 60.0%
GACTGCTCAAGCGTGTGGGA+AGG - tig0029079:24175-24194 Msa1440370:intron 60.0%
GATGGAGAGGACGGCGAATG+AGG - tig0029079:26370-26389 Msa1440370:five_prime_UTR 60.0%
CGGCTAGGACCGCTTTCGAA+AGG - tig0029079:23090-23109 Msa1440370:five_prime_UTR 60.0%
! CGGTAGCGGCCTTTCGAAAG+CGG + tig0029079:23102-23121 None:intergenic 60.0%
TTCGAAAGGCCGCTACCGAG+TGG - tig0029079:23104-23123 Msa1440370:five_prime_UTR 60.0%
TAGGCCACTCCACTCGGTAG+CGG + tig0029079:23116-23135 None:intergenic 60.0%
TTGGGTCTGCCGGAACGTGT+CGG + tig0029079:28107-28126 None:intergenic 60.0%
! ACCGGAGCTGAAGGTGGTGG+TGG - tig0029079:20711-20730 Msa1440370:CDS 65.0%
GCCACCACCACCTTCAGCTC+CGG + tig0029079:20715-20734 None:intergenic 65.0%
! GTTGAAGTTGGCGGTGGCGG+TGG - tig0029079:20867-20886 Msa1440370:five_prime_UTR 65.0%
GGTGGCACCAGAGCTGAAGG+TGG - tig0029079:20885-20904 Msa1440370:five_prime_UTR 65.0%
GGCACCAGAGCTGAAGGTGG+TGG - tig0029079:20888-20907 Msa1440370:five_prime_UTR 65.0%
GCCACCACCACCTTCAGCTC+TGG + tig0029079:20715-20734 None:intergenic 65.0%
! ACCGGAGCTGAAGGTGGTGG+AGG - tig0029079:20711-20730 Msa1440370:CDS 65.0%
CCCTCCACCACCTTCAGCTC+CGG + tig0029079:21069-21088 None:intergenic 65.0%
!! CCGGAGCTGAAGGTGGTGGA+GGG - tig0029079:21066-21085 Msa1440370:five_prime_UTR 65.0%
!! CGGAGCTGAAGGTGGTGGAG+GGG - tig0029079:21067-21086 Msa1440370:five_prime_UTR 65.0%
GGAGGGGAAAGGAGGACCGA+TGG - tig0029079:21083-21102 Msa1440370:five_prime_UTR 65.0%
!! GTTGGTGGCGATGGCGGTTG+CGG - tig0029079:21164-21183 Msa1440370:intron 65.0%
! GATGGCGGTTGCGGTGGTGT+TGG - tig0029079:21173-21192 Msa1440370:intron 65.0%
!! GGTTGCGGTGGTGTTGGCGA+TGG - tig0029079:21179-21198 Msa1440370:intron 65.0%
!! TCCTCGGATTGGGGGTGTCC+CGG + tig0029079:21349-21368 None:intergenic 65.0%
CCTCGTCGCAATGGCGGTTC+CGG - tig0029079:21625-21644 Msa1440370:five_prime_UTR 65.0%
AAGGCCGCTACCGAGTGGAG+TGG - tig0029079:23109-23128 Msa1440370:five_prime_UTR 65.0%
AAGGCCGCTACCGAGTGGAG+TGG - tig0029079:23109-23128 Msa1440370:five_prime_UTR 65.0%
! GGTGGCACCGGAGCTGAAGG+TGG - tig0029079:20705-20724 Msa1440370:CDS 70.0%
! GGCACCGGAGCTGAAGGTGG+TGG - tig0029079:20708-20727 Msa1440370:CDS 70.0%
GGCGGTGGCACCAGAGCTGA+AGG - tig0029079:20882-20901 Msa1440370:five_prime_UTR 70.0%
! GGTGGCACCGGAGCTGAAGG+TGG - tig0029079:20705-20724 Msa1440370:CDS 70.0%
! GGCACCGGAGCTGAAGGTGG+TGG - tig0029079:20708-20727 Msa1440370:CDS 70.0%
ACCGGGACACCCCCAATCCG+AGG - tig0029079:21345-21364 Msa1440370:intron 70.0%
CCGGAACCGCCATTGCGACG+AGG + tig0029079:21628-21647 None:intergenic 70.0%
! GGCGGTGGCACCGGAGCTGA+AGG - tig0029079:20702-20721 Msa1440370:CDS 75.0%
! GGCGGTGGCACCGGAGCTGA+AGG - tig0029079:20702-20721 Msa1440370:CDS 75.0%
! GGTGGCGATGGCGGTTGCGG+TGG - tig0029079:21167-21186 Msa1440370:intron 75.0%
Chromosome Type Strat End Strand Name
tig0029079 gene 18127 28525 18127 ID=Msa1440370;Name=Msa1440370
tig0029079 mRNA 18127 28525 18127 ID=Msa1440370-mRNA-1;Parent=Msa1440370;Name=Msa1440370-mRNA-1;_AED=0.11;_eAED=0.12;_QI=4342|0.8|0.87|1|0.26|0.25|16|472|271
tig0029079 exon 18127 18688 18127 ID=Msa1440370-mRNA-1:exon:12233;Parent=Msa1440370-mRNA-1
tig0029079 exon 19124 19279 19124 ID=Msa1440370-mRNA-1:exon:12232;Parent=Msa1440370-mRNA-1
tig0029079 exon 19429 19647 19429 ID=Msa1440370-mRNA-1:exon:12231;Parent=Msa1440370-mRNA-1
tig0029079 exon 20108 20309 20108 ID=Msa1440370-mRNA-1:exon:12230;Parent=Msa1440370-mRNA-1
tig0029079 exon 20691 21178 20691 ID=Msa1440370-mRNA-1:exon:12229;Parent=Msa1440370-mRNA-1
tig0029079 exon 21436 22160 21436 ID=Msa1440370-mRNA-1:exon:12228;Parent=Msa1440370-mRNA-1
tig0029079 exon 22322 22534 22322 ID=Msa1440370-mRNA-1:exon:12227;Parent=Msa1440370-mRNA-1
tig0029079 exon 22671 22799 22671 ID=Msa1440370-mRNA-1:exon:12226;Parent=Msa1440370-mRNA-1
tig0029079 exon 23090 23259 23090 ID=Msa1440370-mRNA-1:exon:12225;Parent=Msa1440370-mRNA-1
tig0029079 exon 23352 23581 23352 ID=Msa1440370-mRNA-1:exon:12224;Parent=Msa1440370-mRNA-1
tig0029079 exon 23706 24044 23706 ID=Msa1440370-mRNA-1:exon:12223;Parent=Msa1440370-mRNA-1
tig0029079 exon 24709 25217 24709 ID=Msa1440370-mRNA-1:exon:12222;Parent=Msa1440370-mRNA-1
tig0029079 exon 25389 25574 25389 ID=Msa1440370-mRNA-1:exon:12221;Parent=Msa1440370-mRNA-1
tig0029079 exon 25929 26812 25929 ID=Msa1440370-mRNA-1:exon:12220;Parent=Msa1440370-mRNA-1
tig0029079 exon 27471 27841 27471 ID=Msa1440370-mRNA-1:exon:12219;Parent=Msa1440370-mRNA-1
tig0029079 exon 28279 28525 28279 ID=Msa1440370-mRNA-1:exon:12218;Parent=Msa1440370-mRNA-1
tig0029079 five_prime_UTR 28279 28525 28279 ID=Msa1440370-mRNA-1:five_prime_utr;Parent=Msa1440370-mRNA-1
tig0029079 five_prime_UTR 27471 27841 27471 ID=Msa1440370-mRNA-1:five_prime_utr;Parent=Msa1440370-mRNA-1
tig0029079 five_prime_UTR 25929 26812 25929 ID=Msa1440370-mRNA-1:five_prime_utr;Parent=Msa1440370-mRNA-1
tig0029079 five_prime_UTR 25389 25574 25389 ID=Msa1440370-mRNA-1:five_prime_utr;Parent=Msa1440370-mRNA-1
tig0029079 five_prime_UTR 24709 25217 24709 ID=Msa1440370-mRNA-1:five_prime_utr;Parent=Msa1440370-mRNA-1
tig0029079 five_prime_UTR 23706 24044 23706 ID=Msa1440370-mRNA-1:five_prime_utr;Parent=Msa1440370-mRNA-1
tig0029079 five_prime_UTR 23352 23581 23352 ID=Msa1440370-mRNA-1:five_prime_utr;Parent=Msa1440370-mRNA-1
tig0029079 five_prime_UTR 23090 23259 23090 ID=Msa1440370-mRNA-1:five_prime_utr;Parent=Msa1440370-mRNA-1
tig0029079 five_prime_UTR 22671 22799 22671 ID=Msa1440370-mRNA-1:five_prime_utr;Parent=Msa1440370-mRNA-1
tig0029079 five_prime_UTR 22322 22534 22322 ID=Msa1440370-mRNA-1:five_prime_utr;Parent=Msa1440370-mRNA-1
tig0029079 five_prime_UTR 21436 22160 21436 ID=Msa1440370-mRNA-1:five_prime_utr;Parent=Msa1440370-mRNA-1
tig0029079 five_prime_UTR 20840 21178 20840 ID=Msa1440370-mRNA-1:five_prime_utr;Parent=Msa1440370-mRNA-1
tig0029079 CDS 20691 20839 20691 ID=Msa1440370-mRNA-1:cds;Parent=Msa1440370-mRNA-1
tig0029079 CDS 20108 20309 20108 ID=Msa1440370-mRNA-1:cds;Parent=Msa1440370-mRNA-1
tig0029079 CDS 19429 19647 19429 ID=Msa1440370-mRNA-1:cds;Parent=Msa1440370-mRNA-1
tig0029079 CDS 19124 19279 19124 ID=Msa1440370-mRNA-1:cds;Parent=Msa1440370-mRNA-1
tig0029079 CDS 18599 18688 18599 ID=Msa1440370-mRNA-1:cds;Parent=Msa1440370-mRNA-1
tig0029079 three_prime_UTR 18127 18598 18127 ID=Msa1440370-mRNA-1:three_prime_utr;Parent=Msa1440370-mRNA-1
Gene Sequence

>Msa1440370

ATGTCAATGGAAGTGACTGCAGGTGCCTTGAAAAACTTTGGAGCGGATGTGAAGTGTGCAGACAGCGGCAAAGCTGCTCTTGAAATGCTTCTATTCCCTCACAAGTTTGATGCTTGCTTCAAGGATATTCAAATGCAAGAAAAGGACGGGTTTGAAGCAACTCGTCGAATTCGGGAGATGGAGAGGACGGCGAATGAGGAGACGAATGGTGAATGTAGTGAAAGGAAAAGTAAATTCCGTTTACCTATATTGGCCATGACAGCAGATGTAATCCATGCTACATATGAAGAGTGTTTGAAATGTGGGATGGATGGTTATGTCTCAAAACCTTTTGAGGAAGGAATTGTTCAGATGAAGATGCAAAATCAGCACCACCCTTTGGCTTCAAAGTTACAAGAAACTTTTGCAGAATATGCGGCTAGGACCGCTTTCGAAAGGCCGCTACCGAGTGGAGTGGCCTATGCACAAAGAGTTGTTAACTCGGAAAGAGAGCGGTTTGAGAAGCAGCATAGAGTGGTTATAAAGACAATGGAAAGAGAGGCTTCACAGGTTAGGGATGAGTATGCACCGGATGACCGAGAAAACATACTGAGAGCTCCTACTGGGAAGTTTGTTCCGACTAGCCCTTTTAGGTTGTTGGGTTCTCATCATCTCGGTGTGGTTTTAACATTTCCTGTTTACAAATTTAAGCTCCCTCCCAACCCAACAACAGAAGAGCTCATTAAAGGAAACATTGCTGAAGGTGCACTTTTAACCGACTTTTTGATGGCCAGAATGCGGAGTTTAGCACATACGGGGACTGGCTTCTACGGGTAA
Protein sequence

>Msa1440370

MSMEVTAGALKNFGADVKCADSGKAALEMLLFPHKFDACFKDIQMQEKDGFEATRRIREMERTANEETNGECSERKSKFRLPILAMTADVIHATYEECLKCGMDGYVSKPFEEGIVQMKMQNQHHPLASKLQETFAEYAARTAFERPLPSGVAYAQRVVNSERERFEKQHRVVIKTMEREASQVRDEYAPDDRENILRAPTGKFVPTSPFRLLGSHHLGVVLTFPVYKFKLPPNPTTEELIKGNIAEGALLTDFLMARMRSLAHTGTGFYG*