Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0663510 | XP_003604244.1 | 100.000 | 259 | 0 | 0 | 1 | 259 | 1 | 259 | 0.0 | 524 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0663510 | sp|Q9XGM1|VATD_ARATH | 79.389 | 262 | 50 | 2 | 1 | 259 | 1 | 261 | 1.51e-151 | 426 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0663510 | G7JEF1 | 100.000 | 259 | 0 | 0 | 1 | 259 | 1 | 259 | 0.0 | 524 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0072170 | Msa0663510 | 0.801428 | 9.047679e-49 | -8.615850e-47 |
| Msa0106280 | Msa0663510 | 0.802969 | 4.359154e-49 | -8.615850e-47 |
| Msa0608910 | Msa0663510 | 0.814287 | 1.663802e-51 | -8.615850e-47 |
| Msa0625790 | Msa0663510 | 0.810826 | 9.503061e-51 | -8.615850e-47 |
| Msa0649410 | Msa0663510 | 0.820786 | 5.706933e-53 | -8.615850e-47 |
| Msa0649450 | Msa0663510 | 0.805425 | 1.343107e-49 | -8.615850e-47 |
| Msa0658480 | Msa0663510 | 0.816225 | 6.171384e-52 | -8.615850e-47 |
| Msa0663510 | Msa0690620 | 0.815205 | 1.041560e-51 | -8.615850e-47 |
| Msa0663510 | Msa0707390 | 0.831807 | 1.353677e-55 | -8.615850e-47 |
| Msa0663510 | Msa0771090 | 0.806377 | 8.472864e-50 | -8.615850e-47 |
| Msa0663510 | Msa0957450 | -0.834676 | 2.611119e-56 | -8.615850e-47 |
| Msa0663510 | Msa1188560 | 0.805359 | 1.387080e-49 | -8.615850e-47 |
| Msa0663510 | Msa1205480 | 0.801709 | 7.924150e-49 | -8.615850e-47 |
| Msa0663510 | Msa1213770 | 0.814101 | 1.828564e-51 | -8.615850e-47 |
| Msa0663510 | Msa1385350 | 0.800301 | 1.536833e-48 | -8.615850e-47 |
| Msa0436200 | Msa0663510 | 0.825612 | 4.263097e-54 | -8.615850e-47 |
| Msa0265160 | Msa0663510 | 0.810998 | 8.719780e-51 | -8.615850e-47 |
| Msa0524590 | Msa0663510 | 0.806559 | 7.757098e-50 | -8.615850e-47 |
| Msa0549790 | Msa0663510 | 0.813633 | 2.318648e-51 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0663510 | MtrunA17_Chr4g0001341 | 100.000 | 259 | 0 | 0 | 1 | 259 | 1 | 259 | 0.0 | 524 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0663510 | AT3G58730.1 | 79.389 | 262 | 50 | 2 | 1 | 259 | 1 | 261 | 1.53e-152 | 426 |
Find 59 sgRNAs with CRISPR-Local
Find 120 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CTTTAGGTTGAAGAAGATTC+AGG | 0.251278 | 4_4:-2395594 | Msa0663510:CDS |
| GAATACTATTAGTTACATTA+AGG | 0.278798 | 4_4:-2395648 | Msa0663510:CDS |
| GTGTCGTGTTGCTTATATTA+AGG | 0.324047 | 4_4:-2395792 | Msa0663510:CDS |
| TTGAAAGAGAGGATTTCTTT+AGG | 0.354494 | 4_4:-2395610 | Msa0663510:CDS |
| AACTTGTTGGCTGGTACGAC+TGG | 0.385007 | 4_4:-2395467 | Msa0663510:CDS |
| GACAATGCTTGGAGTGGTTA+AGG | 0.388176 | 4_4:-2396158 | Msa0663510:CDS |
| TGAAACCTCTCACAACTTGT+TGG | 0.400530 | 4_4:-2395480 | Msa0663510:CDS |
| TGTTTCAACAAAGGAATCAA+TGG | 0.435503 | 4_4:-2396044 | Msa0663510:CDS |
| AATACTATTAGTTACATTAA+GGG | 0.450457 | 4_4:-2395647 | Msa0663510:CDS |
| TAGTTACATTAAGGGTGAGT+TGG | 0.451344 | 4_4:-2395639 | Msa0663510:CDS |
| TCCAGTCAGATCATTCTTTG+TGG | 0.457073 | 4_4:+2395844 | None:intergenic |
| AAAGGAAGATGGTGATTGCT+AGG | 0.464882 | 4_4:-2395550 | Msa0663510:CDS |
| TGGAGTGGTTAAGGCACGTT+TGG | 0.467712 | 4_4:-2396149 | Msa0663510:CDS |
| GTTGGATGAGCTTGAAAGAG+AGG | 0.470817 | 4_4:-2395621 | Msa0663510:CDS |
| GTTTCAACAAAGGAATCAAT+GGG | 0.471657 | 4_4:-2396043 | Msa0663510:CDS |
| ACCTCTCACAACTTGTTGGC+TGG | 0.473238 | 4_4:-2395476 | Msa0663510:CDS |
| TGCTTATATTAAGGCGATTG+AGG | 0.474951 | 4_4:-2395783 | Msa0663510:CDS |
| GATTCAGGGTTATAAGAGAA+GGG | 0.485877 | 4_4:-2395579 | Msa0663510:CDS |
| AGATTCAGGGTTATAAGAGA+AGG | 0.493948 | 4_4:-2395580 | Msa0663510:CDS |
| CTAATAGTATTCTCCAACCT+CGG | 0.495607 | 4_4:+2395659 | None:intergenic |
| GTGGTTAAGGCACGTTTGGT+TGG | 0.501885 | 4_4:-2396145 | Msa0663510:CDS |
| TTTAGGTTGAAGAAGATTCA+GGG | 0.502528 | 4_4:-2395593 | Msa0663510:CDS |
| TCTCGTACTGAGAACGTAGC+AGG | 0.505135 | 4_4:-2395908 | Msa0663510:CDS |
| ATTGGCTAGAGGTGGTCAGC+AGG | 0.515670 | 4_4:-2395822 | Msa0663510:CDS |
| AAAAGCTACAATTGCAGCAA+GGG | 0.518728 | 4_4:-2395511 | Msa0663510:CDS |
| AAGGGAAATTGAAAGGAAGA+TGG | 0.529036 | 4_4:-2395561 | Msa0663510:CDS |
| AAAGAATGATCTGACTGGAT+TGG | 0.537848 | 4_4:-2395840 | Msa0663510:CDS |
| TAGTCTTAATAGCATCATCA+AGG | 0.542669 | 4_4:+2395720 | None:intergenic |
| ATAAGAGAAGGGAAATTGAA+AGG | 0.547977 | 4_4:-2395568 | Msa0663510:CDS |
| ATCATCAAGGGTAAGAAAAG+AGG | 0.549268 | 4_4:+2395733 | None:intergenic |
| GTCCCCACAGTGACAATGCT+TGG | 0.555756 | 4_4:-2396169 | Msa0663510:CDS |
| TCTCAAGAGCATTGACCCTA+CGG | 0.557861 | 4_4:+2395693 | None:intergenic |
| GAATGTCGTTAAGCCGAGGT+TGG | 0.558244 | 4_4:-2395672 | Msa0663510:CDS |
| ATGTTAAAGAAGCTTCACTC+AGG | 0.568588 | 4_4:-2395937 | Msa0663510:CDS |
| CTATTAAGACTACTAACCGT+AGG | 0.570720 | 4_4:-2395709 | Msa0663510:CDS |
| ACTCCAAGCATTGTCACTGT+GGG | 0.583853 | 4_4:+2396166 | None:intergenic |
| GCCACAAAGAATGATCTGAC+TGG | 0.585212 | 4_4:-2395845 | Msa0663510:CDS |
| GAAAAGCTACAATTGCAGCA+AGG | 0.591309 | 4_4:-2395512 | Msa0663510:CDS |
| ACTGAGGCTAAGTATGTAGC+CGG | 0.591330 | 4_4:-2395989 | Msa0663510:CDS |
| GCAATCACAACGTTTGAATG+TGG | 0.591655 | 4_4:-2396191 | Msa0663510:CDS |
| TTCTTCATTTGCATTAACTG+AGG | 0.593026 | 4_4:-2396005 | Msa0663510:CDS |
| CGTTTGGTTGGAGCAACAAG+AGG | 0.602491 | 4_4:-2396133 | Msa0663510:CDS |
| AAGGAAGATGGTGATTGCTA+GGG | 0.610095 | 4_4:-2395549 | Msa0663510:CDS |
| CACTCCAAGCATTGTCACTG+TGG | 0.610571 | 4_4:+2396165 | None:intergenic |
| AAGTTTGATTACAGTGCTGA+CGG | 0.611337 | 4_4:-2395872 | Msa0663510:CDS |
| AGTCTTAATAGCATCATCAA+GGG | 0.622324 | 4_4:+2395721 | None:intergenic |
| GACGTGCTTGATGTTATCAC+CGG | 0.624967 | 4_4:+2395970 | None:intergenic |
| AAAGCTACAATTGCAGCAAG+GGG | 0.625532 | 4_4:-2395510 | Msa0663510:CDS |
| CACAGTGACAATGCTTGGAG+TGG | 0.627138 | 4_4:-2396164 | Msa0663510:CDS |
| TATTAAGACTACTAACCGTA+GGG | 0.628796 | 4_4:-2395708 | Msa0663510:CDS |
| TTGAGAATGTCGTTAAGCCG+AGG | 0.630606 | 4_4:-2395676 | Msa0663510:CDS |
| ACCAGCCAACAAGTTGTGAG+AGG | 0.637543 | 4_4:+2395475 | None:intergenic |
| TCAGCACTGTAATCAAACTT+CGG | 0.645925 | 4_4:+2395875 | None:intergenic |
| TGTTAAAGAAGCTTCACTCA+GGG | 0.649586 | 4_4:-2395936 | Msa0663510:CDS |
| CTGACTGGATTGGCTAGAGG+TGG | 0.655401 | 4_4:-2395830 | Msa0663510:CDS |
| TGATTACAGTGCTGACGGTG+AGG | 0.656119 | 4_4:-2395867 | Msa0663510:CDS |
| GATCTGACTGGATTGGCTAG+AGG | 0.670803 | 4_4:-2395833 | Msa0663510:CDS |
| CTCCAAGCATTGTCACTGTG+GGG | 0.709998 | 4_4:+2396167 | None:intergenic |
| TGGTACGACTGGAAAAGACG+AGG | 0.748180 | 4_4:-2395456 | Msa0663510:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AATACTATTAGTTACATTAA+GGG | - | chr4_4:2395994-2396013 | Msa0663510:CDS | 15.0% |
| !! | AATACTATTAGTTACATTAA+GGG | - | chr4_4:2395994-2396013 | Msa0663510:CDS | 15.0% |
| !! | GAATACTATTAGTTACATTA+AGG | - | chr4_4:2395993-2396012 | Msa0663510:CDS | 20.0% |
| !! | GAATACTATTAGTTACATTA+AGG | - | chr4_4:2395993-2396012 | Msa0663510:CDS | 20.0% |
| ! | GAAAAAGATTGTTTCAACAA+AGG | - | chr4_4:2395588-2395607 | Msa0663510:CDS | 25.0% |
| ! | GAAAAAGATTGTTTCAACAA+AGG | - | chr4_4:2395588-2395607 | Msa0663510:CDS | 25.0% |
| TGTTTCAACAAAGGAATCAA+TGG | - | chr4_4:2395597-2395616 | Msa0663510:CDS | 30.0% | |
| GTTTCAACAAAGGAATCAAT+GGG | - | chr4_4:2395598-2395617 | Msa0663510:CDS | 30.0% | |
| TTCTTCATTTGCATTAACTG+AGG | - | chr4_4:2395636-2395655 | Msa0663510:CDS | 30.0% | |
| AGTCTTAATAGCATCATCAA+GGG | + | chr4_4:2395923-2395942 | None:intergenic | 30.0% | |
| ! | TAGTCTTAATAGCATCATCA+AGG | + | chr4_4:2395924-2395943 | None:intergenic | 30.0% |
| TATTAAGACTACTAACCGTA+GGG | - | chr4_4:2395933-2395952 | Msa0663510:CDS | 30.0% | |
| TTGAAAGAGAGGATTTCTTT+AGG | - | chr4_4:2396031-2396050 | Msa0663510:CDS | 30.0% | |
| !! | TTTAGGTTGAAGAAGATTCA+GGG | - | chr4_4:2396048-2396067 | Msa0663510:CDS | 30.0% |
| ATAAGAGAAGGGAAATTGAA+AGG | - | chr4_4:2396073-2396092 | Msa0663510:CDS | 30.0% | |
| TGTTTCAACAAAGGAATCAA+TGG | - | chr4_4:2395597-2395616 | Msa0663510:CDS | 30.0% | |
| GTTTCAACAAAGGAATCAAT+GGG | - | chr4_4:2395598-2395617 | Msa0663510:CDS | 30.0% | |
| TTCTTCATTTGCATTAACTG+AGG | - | chr4_4:2395636-2395655 | Msa0663510:CDS | 30.0% | |
| AGTCTTAATAGCATCATCAA+GGG | + | chr4_4:2395923-2395942 | None:intergenic | 30.0% | |
| ! | TAGTCTTAATAGCATCATCA+AGG | + | chr4_4:2395924-2395943 | None:intergenic | 30.0% |
| TATTAAGACTACTAACCGTA+GGG | - | chr4_4:2395933-2395952 | Msa0663510:CDS | 30.0% | |
| TTGAAAGAGAGGATTTCTTT+AGG | - | chr4_4:2396031-2396050 | Msa0663510:CDS | 30.0% | |
| !! | TTTAGGTTGAAGAAGATTCA+GGG | - | chr4_4:2396048-2396067 | Msa0663510:CDS | 30.0% |
| ATAAGAGAAGGGAAATTGAA+AGG | - | chr4_4:2396073-2396092 | Msa0663510:CDS | 30.0% | |
| ATGTTAAAGAAGCTTCACTC+AGG | - | chr4_4:2395704-2395723 | Msa0663510:CDS | 35.0% | |
| TGTTAAAGAAGCTTCACTCA+GGG | - | chr4_4:2395705-2395724 | Msa0663510:CDS | 35.0% | |
| TCAGCACTGTAATCAAACTT+CGG | + | chr4_4:2395769-2395788 | None:intergenic | 35.0% | |
| ! | AAGTTTGATTACAGTGCTGA+CGG | - | chr4_4:2395769-2395788 | Msa0663510:CDS | 35.0% |
| AAAGAATGATCTGACTGGAT+TGG | - | chr4_4:2395801-2395820 | Msa0663510:CDS | 35.0% | |
| !! | GTGTCGTGTTGCTTATATTA+AGG | - | chr4_4:2395849-2395868 | Msa0663510:CDS | 35.0% |
| TGCTTATATTAAGGCGATTG+AGG | - | chr4_4:2395858-2395877 | Msa0663510:CDS | 35.0% | |
| ATCATCAAGGGTAAGAAAAG+AGG | + | chr4_4:2395911-2395930 | None:intergenic | 35.0% | |
| CTATTAAGACTACTAACCGT+AGG | - | chr4_4:2395932-2395951 | Msa0663510:CDS | 35.0% | |
| CTAATAGTATTCTCCAACCT+CGG | + | chr4_4:2395985-2396004 | None:intergenic | 35.0% | |
| TAGTTACATTAAGGGTGAGT+TGG | - | chr4_4:2396002-2396021 | Msa0663510:CDS | 35.0% | |
| !! | CTTTAGGTTGAAGAAGATTC+AGG | - | chr4_4:2396047-2396066 | Msa0663510:CDS | 35.0% |
| AGATTCAGGGTTATAAGAGA+AGG | - | chr4_4:2396061-2396080 | Msa0663510:CDS | 35.0% | |
| GATTCAGGGTTATAAGAGAA+GGG | - | chr4_4:2396062-2396081 | Msa0663510:CDS | 35.0% | |
| AAGGGAAATTGAAAGGAAGA+TGG | - | chr4_4:2396080-2396099 | Msa0663510:CDS | 35.0% | |
| AAAAGCTACAATTGCAGCAA+GGG | - | chr4_4:2396130-2396149 | Msa0663510:CDS | 35.0% | |
| ATGTTAAAGAAGCTTCACTC+AGG | - | chr4_4:2395704-2395723 | Msa0663510:CDS | 35.0% | |
| TGTTAAAGAAGCTTCACTCA+GGG | - | chr4_4:2395705-2395724 | Msa0663510:CDS | 35.0% | |
| TCAGCACTGTAATCAAACTT+CGG | + | chr4_4:2395769-2395788 | None:intergenic | 35.0% | |
| ! | AAGTTTGATTACAGTGCTGA+CGG | - | chr4_4:2395769-2395788 | Msa0663510:CDS | 35.0% |
| AAAGAATGATCTGACTGGAT+TGG | - | chr4_4:2395801-2395820 | Msa0663510:CDS | 35.0% | |
| !! | GTGTCGTGTTGCTTATATTA+AGG | - | chr4_4:2395849-2395868 | Msa0663510:CDS | 35.0% |
| TGCTTATATTAAGGCGATTG+AGG | - | chr4_4:2395858-2395877 | Msa0663510:CDS | 35.0% | |
| ATCATCAAGGGTAAGAAAAG+AGG | + | chr4_4:2395911-2395930 | None:intergenic | 35.0% | |
| CTATTAAGACTACTAACCGT+AGG | - | chr4_4:2395932-2395951 | Msa0663510:CDS | 35.0% | |
| CTAATAGTATTCTCCAACCT+CGG | + | chr4_4:2395985-2396004 | None:intergenic | 35.0% | |
| TAGTTACATTAAGGGTGAGT+TGG | - | chr4_4:2396002-2396021 | Msa0663510:CDS | 35.0% | |
| !! | CTTTAGGTTGAAGAAGATTC+AGG | - | chr4_4:2396047-2396066 | Msa0663510:CDS | 35.0% |
| AGATTCAGGGTTATAAGAGA+AGG | - | chr4_4:2396061-2396080 | Msa0663510:CDS | 35.0% | |
| GATTCAGGGTTATAAGAGAA+GGG | - | chr4_4:2396062-2396081 | Msa0663510:CDS | 35.0% | |
| AAGGGAAATTGAAAGGAAGA+TGG | - | chr4_4:2396080-2396099 | Msa0663510:CDS | 35.0% | |
| AAAAGCTACAATTGCAGCAA+GGG | - | chr4_4:2396130-2396149 | Msa0663510:CDS | 35.0% | |
| GCAATCACAACGTTTGAATG+TGG | - | chr4_4:2395450-2395469 | Msa0663510:CDS | 40.0% | |
| TCCAGTCAGATCATTCTTTG+TGG | + | chr4_4:2395800-2395819 | None:intergenic | 40.0% | |
| AAAGGAAGATGGTGATTGCT+AGG | - | chr4_4:2396091-2396110 | Msa0663510:CDS | 40.0% | |
| AAGGAAGATGGTGATTGCTA+GGG | - | chr4_4:2396092-2396111 | Msa0663510:CDS | 40.0% | |
| GAAAAGCTACAATTGCAGCA+AGG | - | chr4_4:2396129-2396148 | Msa0663510:CDS | 40.0% | |
| AAAGCTACAATTGCAGCAAG+GGG | - | chr4_4:2396131-2396150 | Msa0663510:CDS | 40.0% | |
| TGAAACCTCTCACAACTTGT+TGG | - | chr4_4:2396161-2396180 | Msa0663510:CDS | 40.0% | |
| GCAATCACAACGTTTGAATG+TGG | - | chr4_4:2395450-2395469 | Msa0663510:CDS | 40.0% | |
| TCCAGTCAGATCATTCTTTG+TGG | + | chr4_4:2395800-2395819 | None:intergenic | 40.0% | |
| AAAGGAAGATGGTGATTGCT+AGG | - | chr4_4:2396091-2396110 | Msa0663510:CDS | 40.0% | |
| AAGGAAGATGGTGATTGCTA+GGG | - | chr4_4:2396092-2396111 | Msa0663510:CDS | 40.0% | |
| GAAAAGCTACAATTGCAGCA+AGG | - | chr4_4:2396129-2396148 | Msa0663510:CDS | 40.0% | |
| AAAGCTACAATTGCAGCAAG+GGG | - | chr4_4:2396131-2396150 | Msa0663510:CDS | 40.0% | |
| TGAAACCTCTCACAACTTGT+TGG | - | chr4_4:2396161-2396180 | Msa0663510:CDS | 40.0% | |
| ! | ACTCCAAGCATTGTCACTGT+GGG | + | chr4_4:2395478-2395497 | None:intergenic | 45.0% |
| GACAATGCTTGGAGTGGTTA+AGG | - | chr4_4:2395483-2395502 | Msa0663510:CDS | 45.0% | |
| ACTGAGGCTAAGTATGTAGC+CGG | - | chr4_4:2395652-2395671 | Msa0663510:CDS | 45.0% | |
| GACGTGCTTGATGTTATCAC+CGG | + | chr4_4:2395674-2395693 | None:intergenic | 45.0% | |
| GCCACAAAGAATGATCTGAC+TGG | - | chr4_4:2395796-2395815 | Msa0663510:CDS | 45.0% | |
| !! | TCTCAAGAGCATTGACCCTA+CGG | + | chr4_4:2395951-2395970 | None:intergenic | 45.0% |
| TTGAGAATGTCGTTAAGCCG+AGG | - | chr4_4:2395965-2395984 | Msa0663510:CDS | 45.0% | |
| GTTGGATGAGCTTGAAAGAG+AGG | - | chr4_4:2396020-2396039 | Msa0663510:CDS | 45.0% | |
| ! | ACTCCAAGCATTGTCACTGT+GGG | + | chr4_4:2395478-2395497 | None:intergenic | 45.0% |
| GACAATGCTTGGAGTGGTTA+AGG | - | chr4_4:2395483-2395502 | Msa0663510:CDS | 45.0% | |
| ACTGAGGCTAAGTATGTAGC+CGG | - | chr4_4:2395652-2395671 | Msa0663510:CDS | 45.0% | |
| GACGTGCTTGATGTTATCAC+CGG | + | chr4_4:2395674-2395693 | None:intergenic | 45.0% | |
| GCCACAAAGAATGATCTGAC+TGG | - | chr4_4:2395796-2395815 | Msa0663510:CDS | 45.0% | |
| !! | TCTCAAGAGCATTGACCCTA+CGG | + | chr4_4:2395951-2395970 | None:intergenic | 45.0% |
| TTGAGAATGTCGTTAAGCCG+AGG | - | chr4_4:2395965-2395984 | Msa0663510:CDS | 45.0% | |
| GTTGGATGAGCTTGAAAGAG+AGG | - | chr4_4:2396020-2396039 | Msa0663510:CDS | 45.0% | |
| ! | CTCCAAGCATTGTCACTGTG+GGG | + | chr4_4:2395477-2395496 | None:intergenic | 50.0% |
| ! | CACTCCAAGCATTGTCACTG+TGG | + | chr4_4:2395479-2395498 | None:intergenic | 50.0% |
| CACAGTGACAATGCTTGGAG+TGG | - | chr4_4:2395477-2395496 | Msa0663510:CDS | 50.0% | |
| TGGAGTGGTTAAGGCACGTT+TGG | - | chr4_4:2395492-2395511 | Msa0663510:CDS | 50.0% | |
| GTGGTTAAGGCACGTTTGGT+TGG | - | chr4_4:2395496-2395515 | Msa0663510:CDS | 50.0% | |
| CGTTTGGTTGGAGCAACAAG+AGG | - | chr4_4:2395508-2395527 | Msa0663510:CDS | 50.0% | |
| TCTCGTACTGAGAACGTAGC+AGG | - | chr4_4:2395733-2395752 | Msa0663510:CDS | 50.0% | |
| !! | TGATTACAGTGCTGACGGTG+AGG | - | chr4_4:2395774-2395793 | Msa0663510:CDS | 50.0% |
| !! | GATCTGACTGGATTGGCTAG+AGG | - | chr4_4:2395808-2395827 | Msa0663510:CDS | 50.0% |
| GAATGTCGTTAAGCCGAGGT+TGG | - | chr4_4:2395969-2395988 | Msa0663510:CDS | 50.0% | |
| !! | ACCTCTCACAACTTGTTGGC+TGG | - | chr4_4:2396165-2396184 | Msa0663510:CDS | 50.0% |
| ACCAGCCAACAAGTTGTGAG+AGG | + | chr4_4:2396169-2396188 | None:intergenic | 50.0% | |
| !! | AACTTGTTGGCTGGTACGAC+TGG | - | chr4_4:2396174-2396193 | Msa0663510:CDS | 50.0% |
| TGGTACGACTGGAAAAGACG+AGG | - | chr4_4:2396185-2396204 | Msa0663510:CDS | 50.0% | |
| ! | CTCCAAGCATTGTCACTGTG+GGG | + | chr4_4:2395477-2395496 | None:intergenic | 50.0% |
| ! | CACTCCAAGCATTGTCACTG+TGG | + | chr4_4:2395479-2395498 | None:intergenic | 50.0% |
| CACAGTGACAATGCTTGGAG+TGG | - | chr4_4:2395477-2395496 | Msa0663510:CDS | 50.0% | |
| TGGAGTGGTTAAGGCACGTT+TGG | - | chr4_4:2395492-2395511 | Msa0663510:CDS | 50.0% | |
| GTGGTTAAGGCACGTTTGGT+TGG | - | chr4_4:2395496-2395515 | Msa0663510:CDS | 50.0% | |
| CGTTTGGTTGGAGCAACAAG+AGG | - | chr4_4:2395508-2395527 | Msa0663510:CDS | 50.0% | |
| TCTCGTACTGAGAACGTAGC+AGG | - | chr4_4:2395733-2395752 | Msa0663510:CDS | 50.0% | |
| !! | TGATTACAGTGCTGACGGTG+AGG | - | chr4_4:2395774-2395793 | Msa0663510:CDS | 50.0% |
| !! | GATCTGACTGGATTGGCTAG+AGG | - | chr4_4:2395808-2395827 | Msa0663510:CDS | 50.0% |
| GAATGTCGTTAAGCCGAGGT+TGG | - | chr4_4:2395969-2395988 | Msa0663510:CDS | 50.0% | |
| !! | ACCTCTCACAACTTGTTGGC+TGG | - | chr4_4:2396165-2396184 | Msa0663510:CDS | 50.0% |
| ACCAGCCAACAAGTTGTGAG+AGG | + | chr4_4:2396169-2396188 | None:intergenic | 50.0% | |
| !! | AACTTGTTGGCTGGTACGAC+TGG | - | chr4_4:2396174-2396193 | Msa0663510:CDS | 50.0% |
| TGGTACGACTGGAAAAGACG+AGG | - | chr4_4:2396185-2396204 | Msa0663510:CDS | 50.0% | |
| GTCCCCACAGTGACAATGCT+TGG | - | chr4_4:2395472-2395491 | Msa0663510:CDS | 55.0% | |
| !! | CTGACTGGATTGGCTAGAGG+TGG | - | chr4_4:2395811-2395830 | Msa0663510:CDS | 55.0% |
| ATTGGCTAGAGGTGGTCAGC+AGG | - | chr4_4:2395819-2395838 | Msa0663510:CDS | 55.0% | |
| GTCCCCACAGTGACAATGCT+TGG | - | chr4_4:2395472-2395491 | Msa0663510:CDS | 55.0% | |
| !! | CTGACTGGATTGGCTAGAGG+TGG | - | chr4_4:2395811-2395830 | Msa0663510:CDS | 55.0% |
| ATTGGCTAGAGGTGGTCAGC+AGG | - | chr4_4:2395819-2395838 | Msa0663510:CDS | 55.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4_4 | gene | 2395442 | 2396221 | 2395442 | ID=Msa0663510;Name=Msa0663510 |
| chr4_4 | mRNA | 2395442 | 2396221 | 2395442 | ID=Msa0663510-mRNA-1;Parent=Msa0663510;Name=Msa0663510-mRNA-1;_AED=0.22;_eAED=0.23;_QI=0|-1|0|1|-1|1|1|0|259 |
| chr4_4 | exon | 2395442 | 2396221 | 2395442 | ID=Msa0663510-mRNA-1:exon:674;Parent=Msa0663510-mRNA-1 |
| chr4_4 | CDS | 2395442 | 2396221 | 2395442 | ID=Msa0663510-mRNA-1:cds;Parent=Msa0663510-mRNA-1 |
| Gene Sequence |
| Protein sequence |
