Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0723580 | QCD89882.1 | 47.487 | 796 | 272 | 18 | 57 | 709 | 1 | 793 | 0.0 | 627 |
| Msa0723580 | QCD89882.1 | 56.545 | 382 | 99 | 9 | 56 | 372 | 399 | 778 | 2.21e-118 | 384 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0723580 | A0A4D6LM61 | 47.487 | 796 | 272 | 18 | 57 | 709 | 1 | 793 | 0.0 | 627 |
| Msa0723580 | A0A4D6LM61 | 56.545 | 382 | 99 | 9 | 56 | 372 | 399 | 778 | 1.06e-118 | 384 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0005260 | Msa0723580 | 0.819190 | 1.322671e-52 | -8.615850e-47 |
| Msa0022470 | Msa0723580 | 0.813868 | 2.058777e-51 | -8.615850e-47 |
| Msa0051960 | Msa0723580 | 0.820907 | 5.351207e-53 | -8.615850e-47 |
| Msa0086360 | Msa0723580 | 0.804831 | 1.788470e-49 | -8.615850e-47 |
| Msa0101960 | Msa0723580 | 0.820596 | 6.310328e-53 | -8.615850e-47 |
| Msa0613300 | Msa0723580 | 0.801292 | 9.645879e-49 | -8.615850e-47 |
| Msa0635270 | Msa0723580 | 0.811923 | 5.491831e-51 | -8.615850e-47 |
| Msa0662580 | Msa0723580 | 0.813816 | 2.113633e-51 | -8.615850e-47 |
| Msa0671860 | Msa0723580 | 0.803294 | 3.733248e-49 | -8.615850e-47 |
| Msa0723580 | Msa0764070 | 0.936656 | 1.225239e-97 | -8.615850e-47 |
| Msa0723580 | Msa0764080 | 0.816158 | 6.388391e-52 | -8.615850e-47 |
| Msa0723580 | Msa0805890 | 0.920752 | 8.588091e-88 | -8.615850e-47 |
| Msa0723580 | Msa0805910 | 0.856570 | 2.943181e-62 | -8.615850e-47 |
| Msa0723580 | Msa0807020 | 0.810828 | 9.493851e-51 | -8.615850e-47 |
| Msa0723580 | Msa0832950 | 0.829043 | 6.418395e-55 | -8.615850e-47 |
| Msa0723580 | Msa0843700 | 0.846205 | 2.513345e-59 | -8.615850e-47 |
| Msa0723580 | Msa1031460 | 0.809723 | 1.643178e-50 | -8.615850e-47 |
| Msa0723580 | Msa1082520 | 0.805170 | 1.519226e-49 | -8.615850e-47 |
| Msa0723580 | Msa1101240 | 0.801661 | 8.102698e-49 | -8.615850e-47 |
| Msa0723580 | Msa1131790 | 0.817717 | 2.853309e-52 | -8.615850e-47 |
| Msa0723580 | Msa1132980 | 0.824190 | 9.230696e-54 | -8.615850e-47 |
| Msa0723580 | Msa1157110 | 0.815142 | 1.075523e-51 | -8.615850e-47 |
| Msa0723580 | Msa1159170 | 0.804760 | 1.850593e-49 | -8.615850e-47 |
| Msa0723580 | Msa1181140 | 0.829974 | 3.812182e-55 | -8.615850e-47 |
| Msa0723580 | Msa1225580 | 0.809742 | 1.628157e-50 | -8.615850e-47 |
| Msa0723580 | Msa1256060 | 0.805728 | 1.160211e-49 | -8.615850e-47 |
| Msa0723580 | Msa1355510 | 0.808197 | 3.486828e-50 | -8.615850e-47 |
| Msa0723580 | Msa1362850 | 0.801460 | 8.909814e-49 | -8.615850e-47 |
| Msa0723580 | Msa1398900 | 0.805706 | 1.172977e-49 | -8.615850e-47 |
| Msa0723580 | Msa1443400 | 0.802790 | 4.746004e-49 | -8.615850e-47 |
| Msa0723580 | Msa1448040 | 0.801532 | 8.615200e-49 | -8.615850e-47 |
| Msa0193190 | Msa0723580 | 0.802717 | 4.913392e-49 | -8.615850e-47 |
| Msa0264680 | Msa0723580 | 0.810638 | 1.043671e-50 | -8.615850e-47 |
| Msa0302730 | Msa0723580 | 0.806013 | 1.010801e-49 | -8.615850e-47 |
| Msa0306310 | Msa0723580 | 0.803703 | 3.071444e-49 | -8.615850e-47 |
| Msa0335070 | Msa0723580 | 0.821242 | 4.481263e-53 | -8.615850e-47 |
| Msa0335080 | Msa0723580 | 0.815523 | 8.849547e-52 | -8.615850e-47 |
| Msa0536540 | Msa0723580 | 0.823224 | 1.554386e-53 | -8.615850e-47 |
| Msa0588710 | Msa0723580 | 0.802079 | 6.650547e-49 | -8.615850e-47 |
| Msa0592650 | Msa0723580 | 0.829185 | 5.929681e-55 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0723580 | MtrunA17_Chr5g0414461 | 83.934 | 361 | 33 | 1 | 374 | 709 | 20 | 380 | 0.0 | 621 |
| Msa0723580 | MtrunA17_Chr5g0414461 | 69.253 | 348 | 62 | 7 | 57 | 359 | 1 | 348 | 2.49e-154 | 452 |
| Msa0723580 | MtrunA17_Chr5g0414371 | 79.539 | 347 | 27 | 4 | 57 | 359 | 1 | 347 | 0.0 | 541 |
| Msa0723580 | MtrunA17_Chr5g0414371 | 69.553 | 358 | 81 | 3 | 376 | 707 | 22 | 377 | 7.54e-170 | 491 |
| Msa0723580 | MtrunA17_Chr5g0414421 | 74.394 | 371 | 44 | 4 | 40 | 359 | 14 | 384 | 0.0 | 534 |
| Msa0723580 | MtrunA17_Chr5g0414421 | 69.482 | 367 | 77 | 3 | 376 | 709 | 52 | 416 | 8.65e-172 | 498 |
| Msa0723580 | MtrunA17_Chr5g0414441 | 77.465 | 355 | 28 | 4 | 57 | 359 | 1 | 355 | 0.0 | 534 |
| Msa0723580 | MtrunA17_Chr5g0414441 | 66.848 | 368 | 86 | 4 | 376 | 709 | 22 | 387 | 1.12e-161 | 471 |
| Msa0723580 | MtrunA17_Chr5g0414391 | 74.499 | 349 | 43 | 5 | 57 | 359 | 1 | 349 | 1.55e-170 | 493 |
| Msa0723580 | MtrunA17_Chr5g0414391 | 66.944 | 360 | 93 | 2 | 376 | 709 | 22 | 381 | 3.45e-161 | 469 |
| Msa0723580 | MtrunA17_Chr0c01g0489311 | 42.744 | 379 | 171 | 8 | 376 | 709 | 22 | 399 | 1.40e-84 | 272 |
| Msa0723580 | MtrunA17_Chr0c01g0489311 | 46.883 | 369 | 128 | 14 | 57 | 359 | 1 | 367 | 3.73e-80 | 261 |
| Msa0723580 | MtrunA17_Chr6g0456421 | 37.270 | 381 | 188 | 10 | 376 | 709 | 22 | 398 | 2.15e-62 | 213 |
| Msa0723580 | MtrunA17_Chr6g0456421 | 37.432 | 366 | 166 | 9 | 57 | 359 | 1 | 366 | 8.99e-62 | 212 |
| Msa0723580 | MtrunA17_Chr5g0414451 | 80.808 | 99 | 5 | 1 | 145 | 229 | 1 | 99 | 1.78e-47 | 162 |
| Msa0723580 | MtrunA17_Chr5g0414451 | 64.646 | 99 | 35 | 0 | 442 | 540 | 1 | 99 | 3.62e-37 | 134 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0723580 | AT1G13530.1 | 38.889 | 396 | 187 | 13 | 354 | 709 | 5 | 385 | 3.63e-62 | 213 |
| Msa0723580 | AT1G13530.1 | 37.950 | 361 | 158 | 13 | 57 | 359 | 1 | 353 | 6.29e-56 | 196 |
| Msa0723580 | AT1G13480.1 | 37.931 | 377 | 180 | 11 | 376 | 709 | 22 | 387 | 4.61e-62 | 213 |
| Msa0723580 | AT1G13480.1 | 37.895 | 380 | 164 | 13 | 57 | 372 | 1 | 372 | 2.38e-58 | 202 |
| Msa0723580 | AT1G13510.1 | 38.441 | 372 | 178 | 13 | 376 | 709 | 22 | 380 | 1.44e-61 | 211 |
| Msa0723580 | AT1G13510.1 | 39.883 | 341 | 141 | 13 | 57 | 343 | 1 | 331 | 5.29e-58 | 201 |
| Msa0723580 | AT1G13540.1 | 40.214 | 373 | 171 | 13 | 376 | 709 | 22 | 381 | 1.73e-61 | 211 |
| Msa0723580 | AT1G13540.1 | 36.111 | 360 | 162 | 12 | 57 | 359 | 1 | 349 | 2.13e-55 | 194 |
| Msa0723580 | AT1G13520.1 | 38.196 | 377 | 181 | 13 | 375 | 709 | 21 | 387 | 1.25e-60 | 209 |
| Msa0723580 | AT1G13520.1 | 37.845 | 362 | 153 | 14 | 57 | 356 | 1 | 352 | 9.59e-59 | 204 |
| Msa0723580 | AT1G13490.2 | 38.677 | 393 | 189 | 13 | 354 | 709 | 5 | 382 | 8.58e-60 | 206 |
| Msa0723580 | AT1G13490.2 | 37.778 | 360 | 157 | 14 | 57 | 359 | 1 | 350 | 9.34e-55 | 192 |
| Msa0723580 | AT1G13490.1 | 40.374 | 374 | 190 | 13 | 354 | 709 | 5 | 363 | 1.47e-58 | 202 |
| Msa0723580 | AT1G13490.1 | 36.464 | 362 | 170 | 14 | 57 | 372 | 1 | 348 | 2.68e-48 | 174 |
| Msa0723580 | AT1G13550.1 | 36.898 | 374 | 183 | 11 | 376 | 706 | 22 | 385 | 2.82e-58 | 202 |
| Msa0723580 | AT1G13550.1 | 35.967 | 367 | 160 | 12 | 57 | 359 | 1 | 356 | 5.02e-54 | 191 |
| Msa0723580 | AT1G13470.1 | 36.267 | 375 | 188 | 12 | 374 | 709 | 16 | 378 | 2.62e-57 | 199 |
| Msa0723580 | AT1G13470.1 | 37.883 | 359 | 154 | 14 | 57 | 359 | 1 | 346 | 7.35e-54 | 190 |
| Msa0723580 | AT1G61600.1 | 34.750 | 400 | 195 | 10 | 376 | 709 | 22 | 421 | 1.98e-55 | 196 |
| Msa0723580 | AT1G61600.1 | 33.248 | 391 | 171 | 11 | 57 | 359 | 1 | 389 | 1.13e-48 | 177 |
| Msa0723580 | AT1G13500.1 | 38.710 | 372 | 179 | 13 | 378 | 709 | 24 | 386 | 4.87e-54 | 191 |
| Msa0723580 | AT1G13500.1 | 35.884 | 379 | 172 | 15 | 57 | 372 | 1 | 371 | 1.31e-49 | 179 |
Find 164 sgRNAs with CRISPR-Local
Find 346 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GAATTCCTTGTGGTTTATTA+AGG | 0.154134 | 5_1:-21378074 | Msa0723580:CDS |
| CACATCAAATTAGGAGTAAA+TGG | 0.158157 | 5_1:-21377429 | Msa0723580:CDS |
| ATTACAAGATAACCGGAATT+TGG | 0.183054 | 5_1:+21378801 | None:intergenic |
| ATCACAAGATAACTTGAATT+TGG | 0.210251 | 5_1:+21381664 | None:intergenic |
| TCAGAACAATCATTGAAAAT+TGG | 0.211604 | 5_1:+21380935 | None:intergenic |
| TTCAAGTTATCTTGTGATAT+TGG | 0.212889 | 5_1:-21381659 | Msa0723580:CDS |
| TTCCGGTTATCTTGTAATAT+TGG | 0.219881 | 5_1:-21378796 | Msa0723580:CDS |
| CCTTCCTTCACAAACATAAA+AGG | 0.226109 | 5_1:+21377895 | None:intergenic |
| AAAATTGGAAAGTTGAAATT+TGG | 0.232410 | 5_1:+21380950 | None:intergenic |
| AGCCTAAAGCTTGGCTTAAA+TGG | 0.235862 | 5_1:+21380999 | None:intergenic |
| ACTAGTGTATGCTGCCATTT+TGG | 0.238420 | 5_1:-21378201 | Msa0723580:CDS |
| TATGTAACACTTGAACAATT+TGG | 0.238831 | 5_1:+21382460 | None:intergenic |
| AATCCGTTCTTGTTGGAAAA+TGG | 0.247239 | 5_1:-21377924 | Msa0723580:CDS |
| TCAGACTCTCACATCAAATT+AGG | 0.256524 | 5_1:-21377438 | Msa0723580:CDS |
| CTCTCCTTCACAAACATAAA+TGG | 0.257853 | 5_1:+21380884 | None:intergenic |
| GAAGGAGAGAATGAATTTAA+AGG | 0.260016 | 5_1:-21380870 | Msa0723580:intron |
| GCTCAAACTTACTCTTTCTT+TGG | 0.280898 | 5_1:-21378765 | Msa0723580:CDS |
| TAAAAGTGTTGGATTGAGTT+TGG | 0.284883 | 5_1:-21377650 | Msa0723580:CDS |
| GCTCAAACTTACTATTGTTT+TGG | 0.297979 | 5_1:-21381628 | Msa0723580:intron |
| GAAATAAGCAAGAAACGTTT+TGG | 0.310305 | 5_1:-21378126 | Msa0723580:CDS |
| AAAGTTGAAATCTGGTAGTT+TGG | 0.320204 | 5_1:+21377969 | None:intergenic |
| ATGTAACACTTGAACAATTT+GGG | 0.340960 | 5_1:+21382461 | None:intergenic |
| TTGAAGGAAAGGACGCTATT+CGG | 0.343227 | 5_1:-21377723 | Msa0723580:CDS |
| GCCTCAGATGGAATTCCTCC+TGG | 0.354070 | 5_1:-21381073 | Msa0723580:CDS |
| TTGGCTTAAATGGTGGTTGC+GGG | 0.360622 | 5_1:+21381009 | None:intergenic |
| GTAACAAAACTTGAAGAGTT+TGG | 0.360783 | 5_1:-21377556 | Msa0723580:CDS |
| TGTGGAAGGACATTGGTATT+GGG | 0.363284 | 5_1:-21378740 | Msa0723580:CDS |
| CGTTCTGAATCCGTTCTTGT+TGG | 0.367660 | 5_1:-21377931 | Msa0723580:CDS |
| TGAAGGAAAGGACGCTGTTT+GGG | 0.368363 | 5_1:-21380717 | Msa0723580:CDS |
| TTGAAGGAAAGGACGCTGTT+TGG | 0.369269 | 5_1:-21380718 | Msa0723580:CDS |
| TGAAGGAAAGGACGCTATTC+GGG | 0.374571 | 5_1:-21377722 | Msa0723580:CDS |
| AATTCCTTGTGGTTTATTAA+GGG | 0.379479 | 5_1:-21378073 | Msa0723580:CDS |
| TAAGCAGGATGGGAGTATTA+AGG | 0.379785 | 5_1:-21382550 | Msa0723580:intron |
| GAAGGAAGGAATGACATTAA+AGG | 0.380941 | 5_1:-21377881 | Msa0723580:CDS |
| CCTTTGAATTTAAGTTTGCT+TGG | 0.389776 | 5_1:+21378238 | None:intergenic |
| ACAAAAGTTGAAGAGTTTGA+TGG | 0.392275 | 5_1:-21380548 | Msa0723580:CDS |
| GACAATGGTTGATTCAATAC+TGG | 0.394738 | 5_1:+21381496 | None:intergenic |
| AAATGGGAACAAAGAAGGTT+TGG | 0.394970 | 5_1:-21380605 | Msa0723580:CDS |
| TCAGAACGATCATTGGATAA+TGG | 0.395582 | 5_1:+21377946 | None:intergenic |
| CTTACTCTTTCTTTGGTTTG+TGG | 0.402118 | 5_1:-21378758 | Msa0723580:CDS |
| TCACTCAAATGGTAGTTTGT+AGG | 0.403643 | 5_1:+21378021 | None:intergenic |
| ATACCATCAGGTCCAAATTC+CGG | 0.411669 | 5_1:-21378813 | Msa0723580:CDS |
| CCTTTGAACTTGTACTAGCT+TGG | 0.411881 | 5_1:+21381227 | None:intergenic |
| GATAATGGAAAGTTGAAATC+TGG | 0.412822 | 5_1:+21377961 | None:intergenic |
| ATCCAATATTACAAGATAAC+CGG | 0.416469 | 5_1:+21378794 | None:intergenic |
| TTGTGGAAGGACATTGGTAT+TGG | 0.416602 | 5_1:-21378741 | Msa0723580:CDS |
| GCACCATTTCCATGCTTTCA+AGG | 0.418163 | 5_1:+21382493 | None:intergenic |
| GAAAGGTTTGGATGGAATGC+TGG | 0.429285 | 5_1:-21377598 | Msa0723580:CDS |
| AGAAGGTTTGGATGGAATGC+TGG | 0.431581 | 5_1:-21380593 | Msa0723580:CDS |
| AGCTAACACTTGAGCAAAGA+TGG | 0.431951 | 5_1:-21380820 | Msa0723580:CDS |
| CACCATTTAAGCCAAGCTTT+AGG | 0.434225 | 5_1:-21381001 | Msa0723580:CDS |
| GAATGAACATAGCTTCTTCA+TGG | 0.436065 | 5_1:+21381518 | None:intergenic |
| AACGGATTCAGAACGATCAT+TGG | 0.436701 | 5_1:+21377939 | None:intergenic |
| AAATGGGAACAAGAAAGGTT+TGG | 0.437035 | 5_1:-21377610 | Msa0723580:CDS |
| CTACCATTTGAGTGAAGCCT+TGG | 0.441404 | 5_1:-21378013 | Msa0723580:CDS |
| AATGACATTAAAGGAACAAA+TGG | 0.441616 | 5_1:-21377872 | Msa0723580:CDS |
| TATTCGGGATGAAAATAGAT+TGG | 0.446685 | 5_1:-21377707 | Msa0723580:CDS |
| CTCTTTCTTTGGTTTGTGGA+AGG | 0.448953 | 5_1:-21378754 | Msa0723580:CDS |
| AAGCCAAGGCTTCACTCAAA+TGG | 0.451311 | 5_1:+21378010 | None:intergenic |
| ACAGAAGTTGCTAAGGTTGA+AGG | 0.453239 | 5_1:-21377739 | Msa0723580:CDS |
| ACAGAAGTTGCTAAGGTTGA+AGG | 0.453239 | 5_1:-21380734 | Msa0723580:intron |
| GAATTTGGCCCTGATGGTGG+TGG | 0.453647 | 5_1:+21381679 | None:intergenic |
| CTATCAGACCCACCACCATC+AGG | 0.458752 | 5_1:-21381688 | Msa0723580:CDS |
| AGTTGACGCTCGAGCAAAGA+TGG | 0.461286 | 5_1:-21377831 | Msa0723580:CDS |
| AGAAGGAAGGGGAAATATCA+AGG | 0.463926 | 5_1:-21381451 | Msa0723580:CDS |
| GATGAAAATAGATTGGTTGA+TGG | 0.465731 | 5_1:-21380695 | Msa0723580:CDS |
| GATGAAAATAGATTGGTTGA+TGG | 0.466232 | 5_1:-21377700 | Msa0723580:CDS |
| TTTGGATGGAATGCTGGGAA+TGG | 0.475064 | 5_1:-21380587 | Msa0723580:CDS |
| GAATTCCTCCTGGGTTATTG+AGG | 0.475186 | 5_1:-21381063 | Msa0723580:CDS |
| GGCTCCTTTCCATGTACAAA+AGG | 0.475308 | 5_1:-21378855 | Msa0723580:CDS |
| AGCACTTGCTGGTAGACTTA+AGG | 0.475837 | 5_1:+21382427 | None:intergenic |
| GTTTGGATGGAATGCTGGGA+AGG | 0.480324 | 5_1:-21377593 | Msa0723580:CDS |
| AGTGTTGAAGATAAAAGTGT+TGG | 0.485922 | 5_1:-21377661 | Msa0723580:CDS |
| TCAAAGGAAAATAGTGGAGA+AGG | 0.489041 | 5_1:-21380785 | Msa0723580:CDS |
| AGTCCTTGAAAGCATGGAAA+TGG | 0.491731 | 5_1:-21382496 | Msa0723580:CDS |
| TGTTTGGGATGAAAATAGAT+TGG | 0.492208 | 5_1:-21380702 | Msa0723580:CDS |
| TAGTACAAGTTCAAAGGAAG+AGG | 0.503151 | 5_1:-21381221 | Msa0723580:CDS |
| ACATCAAATTAGGAGTAAAT+GGG | 0.504473 | 5_1:-21377428 | Msa0723580:CDS |
| ATCTGGTAGTTTGGAACGCA+AGG | 0.505664 | 5_1:+21377978 | None:intergenic |
| ATCGCTACTATGTTATAAGA+AGG | 0.507064 | 5_1:-21381468 | Msa0723580:CDS |
| TTTGGATGGAATGCTGGGAA+GGG | 0.507438 | 5_1:-21377592 | Msa0723580:CDS |
| CTTGGCTTAAATGGTGGTTG+CGG | 0.507449 | 5_1:+21381008 | None:intergenic |
| GCAAAATCAGTTGCCTCAGA+TGG | 0.507539 | 5_1:-21381085 | Msa0723580:CDS |
| AAACTTAAATTCAAAGGAAG+AGG | 0.508991 | 5_1:-21378232 | Msa0723580:CDS |
| AATTTGTTGATAATGATTGA+AGG | 0.512989 | 5_1:+21378149 | None:intergenic |
| AAATGTTTGTTCTGAGGGAA+AGG | 0.513031 | 5_1:+21378711 | None:intergenic |
| GCCGAGTCAGTTGCCTCGGA+TGG | 0.514029 | 5_1:-21378096 | Msa0723580:CDS |
| AATTTGGCCCTGATGGTGGT+GGG | 0.514101 | 5_1:+21381680 | None:intergenic |
| GTGCTCTTTCAGATACCATC+AGG | 0.519418 | 5_1:-21378825 | Msa0723580:CDS |
| TCATGCCGAGTCAGTTGCCT+CGG | 0.520151 | 5_1:-21378100 | Msa0723580:CDS |
| CCAAGCTAGTACAAGTTCAA+AGG | 0.520879 | 5_1:-21381227 | Msa0723580:CDS |
| GGGAACAAAGAAGGTTTGGA+TGG | 0.521569 | 5_1:-21380601 | Msa0723580:CDS |
| CTACTATGTTATAAGAAGGA+AGG | 0.522008 | 5_1:-21381464 | Msa0723580:CDS |
| TTTGGTTTGTGGAAGGACAT+TGG | 0.522019 | 5_1:-21378747 | Msa0723580:CDS |
| CCTCAGATGGAATTCCTCCT+GGG | 0.522046 | 5_1:-21381072 | Msa0723580:CDS |
| ATTTGTTGATAATGATTGAA+GGG | 0.523333 | 5_1:+21378150 | None:intergenic |
| TGATATTAAAACAAGTCCCT+TGG | 0.523624 | 5_1:-21378175 | Msa0723580:CDS |
| GGGAACAAGAAAGGTTTGGA+TGG | 0.524181 | 5_1:-21377606 | Msa0723580:CDS |
| TGTTCTGAATCAGTGGTTGT+TGG | 0.524665 | 5_1:-21380920 | Msa0723580:CDS |
| AGGAACCGCTGCATCGGTAG+AGG | 0.527613 | 5_1:-21382519 | Msa0723580:CDS |
| CTGAACTGTATAAGCAGGAT+GGG | 0.528682 | 5_1:-21382560 | Msa0723580:intron |
| CAAGGAATCATTTGAAGCCA+AGG | 0.529560 | 5_1:+21377996 | None:intergenic |
| GAATGAAATGGGAACAAGAA+AGG | 0.531154 | 5_1:-21377615 | Msa0723580:CDS |
| TACTATGTTATAAGAAGGAA+GGG | 0.531189 | 5_1:-21381463 | Msa0723580:CDS |
| CCAAGCAAACTTAAATTCAA+AGG | 0.533386 | 5_1:-21378238 | Msa0723580:CDS |
| TAAATTTAGTTGTTATGTGT+TGG | 0.533784 | 5_1:-21377515 | Msa0723580:CDS |
| ATGGTATCTGAAAGAGCACT+AGG | 0.534544 | 5_1:+21378829 | None:intergenic |
| AGTTTGGTGGAACAAACAAA+TGG | 0.535620 | 5_1:-21377540 | Msa0723580:CDS |
| GAACATAGCTTCTTCATGGC+GGG | 0.536859 | 5_1:+21381522 | None:intergenic |
| TTATCTTGTGATATTGGATG+AGG | 0.537375 | 5_1:-21381653 | Msa0723580:CDS |
| GAATGAAATGGGAACAAAGA+AGG | 0.541076 | 5_1:-21380610 | Msa0723580:CDS |
| TGGTTAAATGTTTGTTCTGA+GGG | 0.543646 | 5_1:+21378706 | None:intergenic |
| ATTTGGTAGCTTCGAACGCA+AGG | 0.544069 | 5_1:+21380967 | None:intergenic |
| TCCCTCAGGAACCGCTGCAT+CGG | 0.545495 | 5_1:-21382525 | Msa0723580:CDS |
| AGTTGTTGAGGGAATGAAAT+GGG | 0.546947 | 5_1:-21377626 | Msa0723580:CDS |
| AGTTGTTGAGGGAATGAAAT+GGG | 0.546947 | 5_1:-21380621 | Msa0723580:CDS |
| TATTCAAACAGAAGTTGCTA+AGG | 0.547553 | 5_1:-21377746 | Msa0723580:CDS |
| CAATGATTGTTCTGAATCAG+TGG | 0.548989 | 5_1:-21380927 | Msa0723580:CDS |
| TACCGATGCAGCGGTTCCTG+AGG | 0.549236 | 5_1:+21382523 | None:intergenic |
| TCCATCCGAGGCAACTGACT+CGG | 0.549619 | 5_1:+21378095 | None:intergenic |
| TAACTTGAATTTGGCCCTGA+TGG | 0.553073 | 5_1:+21381673 | None:intergenic |
| TTGAGTTTGGAAGTTGTTGA+GGG | 0.559577 | 5_1:-21377637 | Msa0723580:CDS |
| TTGAGTTTGGAAGTTGTTGA+GGG | 0.559577 | 5_1:-21380632 | Msa0723580:CDS |
| AAAGGTTTGGATGGAATGCT+GGG | 0.561735 | 5_1:-21377597 | Msa0723580:CDS |
| GAAGGTTTGGATGGAATGCT+GGG | 0.561735 | 5_1:-21380592 | Msa0723580:CDS |
| AATCATTTGAGCCTAAAGCT+TGG | 0.566503 | 5_1:+21380990 | None:intergenic |
| ACCGATGCAGCGGTTCCTGA+GGG | 0.569803 | 5_1:+21382524 | None:intergenic |
| GCCTCGGATGGAATTCCTTG+TGG | 0.570357 | 5_1:-21378084 | Msa0723580:CDS |
| ATGGTTAAATGTTTGTTCTG+AGG | 0.571762 | 5_1:+21378705 | None:intergenic |
| TAGAGGAGTCCTTGAAAGCA+TGG | 0.573047 | 5_1:-21382502 | Msa0723580:CDS |
| ACTGAACTGTATAAGCAGGA+TGG | 0.579852 | 5_1:-21382561 | Msa0723580:intron |
| TAACCGGAATTTGGACCTGA+TGG | 0.580776 | 5_1:+21378810 | None:intergenic |
| GGAGTATTAAGGACTCCCTC+AGG | 0.583577 | 5_1:-21382539 | Msa0723580:CDS |
| ACAAAACTTGAAGAGTTTGG+TGG | 0.583800 | 5_1:-21377553 | Msa0723580:CDS |
| AGTTTGATGGAACAAATAAG+TGG | 0.584146 | 5_1:-21380535 | Msa0723580:CDS |
| CTAAAGCTTGGCTTAAATGG+TGG | 0.584507 | 5_1:+21381002 | None:intergenic |
| CATAGCTTCTTCATGGCGGG+TGG | 0.584589 | 5_1:+21381525 | None:intergenic |
| GGTGGGTCTGATAGAGCACT+AGG | 0.587046 | 5_1:+21381697 | None:intergenic |
| CAAATGGTAGTTTGTAGGAG+TGG | 0.588488 | 5_1:+21378026 | None:intergenic |
| ATAATGATTGAAGGGCTCCA+AGG | 0.592883 | 5_1:+21378158 | None:intergenic |
| ATTGAGTTTGGAAGTTGTTG+AGG | 0.595211 | 5_1:-21377638 | Msa0723580:CDS |
| ATTGAGTTTGGAAGTTGTTG+AGG | 0.595211 | 5_1:-21380633 | Msa0723580:CDS |
| GTTGACGCTCGAGCAAAGAT+GGG | 0.596375 | 5_1:-21377830 | Msa0723580:CDS |
| TAATGATTGAAGGGCTCCAA+GGG | 0.597144 | 5_1:+21378159 | None:intergenic |
| AGTTGCTAAGGTTGAAGGAA+AGG | 0.599670 | 5_1:-21377734 | Msa0723580:CDS |
| AGTTGCTAAGGTTGAAGGAA+AGG | 0.599670 | 5_1:-21380729 | Msa0723580:intron |
| AAGGAAAATAGTGGAGAAGG+TGG | 0.602522 | 5_1:-21380782 | Msa0723580:CDS |
| TATACCTTCAAAATCACTGA+TGG | 0.602792 | 5_1:+21378686 | None:intergenic |
| GAAGGAAGGGGAAATATCAA+GGG | 0.603366 | 5_1:-21381450 | Msa0723580:intron |
| TGGCTTAAATGGTGGTTGCG+GGG | 0.603595 | 5_1:+21381010 | None:intergenic |
| CCCAGGAGGAATTCCATCTG+AGG | 0.605151 | 5_1:+21381072 | None:intergenic |
| CTTGAATTTGGCCCTGATGG+TGG | 0.608619 | 5_1:+21381676 | None:intergenic |
| AAGTTGTTGAGGGAATGAAA+TGG | 0.611433 | 5_1:-21377627 | Msa0723580:CDS |
| AAGTTGTTGAGGGAATGAAA+TGG | 0.611433 | 5_1:-21380622 | Msa0723580:CDS |
| GCTAACACTTGAGCAAAGAT+GGG | 0.612705 | 5_1:-21380819 | Msa0723580:CDS |
| AATCAGTGGTTGTTGGAAAG+TGG | 0.623216 | 5_1:-21380913 | Msa0723580:CDS |
| TGGTATCTGAAAGAGCACTA+GGG | 0.634667 | 5_1:+21378830 | None:intergenic |
| TATCAGACCCACCACCATCA+GGG | 0.637745 | 5_1:-21381687 | Msa0723580:CDS |
| GGACTCCTCTACCGATGCAG+CGG | 0.647431 | 5_1:+21382514 | None:intergenic |
| TAGTAGCGATTCGAAGACAA+TGG | 0.670254 | 5_1:+21381481 | None:intergenic |
| TGAACATAGCTTCTTCATGG+CGG | 0.672652 | 5_1:+21381521 | None:intergenic |
| ACTATGTTATAAGAAGGAAG+GGG | 0.681475 | 5_1:-21381462 | Msa0723580:CDS |
| ACCACAAGGAATTCCATCCG+AGG | 0.692906 | 5_1:+21378083 | None:intergenic |
| AAAACTACAGCAAAAGCATG+TGG | 0.702446 | 5_1:+21381192 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAAAAATTTACTTTAGTAAT+TGG | - | chr5_1:21377434-21377453 | Msa0723580:CDS | 10.0% |
| !! | TTATTATGTATTCTTAATAT+TGG | - | chr5_1:21377697-21377716 | Msa0723580:CDS | 10.0% |
| !!! | TAAAGTTTTATATAATAACA+TGG | + | chr5_1:21378657-21378676 | None:intergenic | 10.0% |
| !!! | AATTTTAAATATAATGTTCA+AGG | - | chr5_1:21382080-21382099 | Msa0723580:intron | 10.0% |
| !! | ATAATAGTAAATAATCAATA+AGG | + | chr5_1:21382136-21382155 | None:intergenic | 10.0% |
| !! | CATAAAAACATACTATTTAA+AGG | + | chr5_1:21377538-21377557 | None:intergenic | 15.0% |
| !!! | TAAGACAATTATATTTTTGT+TGG | - | chr5_1:21379211-21379230 | Msa0723580:intron | 15.0% |
| !! | AGAAAAACATATAAAAAATG+CGG | + | chr5_1:21380345-21380364 | None:intergenic | 15.0% |
| !! | TAATTTGATGTAATATAGAT+TGG | + | chr5_1:21380450-21380469 | None:intergenic | 15.0% |
| !! | TTTGAACTTTGAATTTATAT+TGG | + | chr5_1:21380503-21380522 | None:intergenic | 15.0% |
| !! | ATGTAATTAAATATTTGCTT+TGG | + | chr5_1:21380822-21380841 | None:intergenic | 15.0% |
| !!! | TCAAGTATTGAATTAAAAAA+AGG | - | chr5_1:21381573-21381592 | Msa0723580:intron | 15.0% |
| !!! | TATATTTGGATGAAATTTTA+TGG | + | chr5_1:21381617-21381636 | None:intergenic | 15.0% |
| !! | GTTTCTATATACTATATATT+TGG | + | chr5_1:21381631-21381650 | None:intergenic | 15.0% |
| !! | TATATAGTATATAGAAACAA+TGG | - | chr5_1:21381633-21381652 | Msa0723580:CDS | 15.0% |
| !!! | AATAGATTAGTTATTATAAG+TGG | - | chr5_1:21382251-21382270 | Msa0723580:intron | 15.0% |
| !!! | AAATGTTAAGTTGTTAATGA+GGG | - | chr5_1:21377492-21377511 | Msa0723580:CDS | 20.0% |
| !! | TTAAGTATAGTATCCTTAAA+AGG | - | chr5_1:21377619-21377638 | Msa0723580:CDS | 20.0% |
| !!! | TTTTATTTTGTGTTTCTAAG+AGG | - | chr5_1:21377762-21377781 | Msa0723580:CDS | 20.0% |
| !! | TTTAACCAATTGAATATTCT+AGG | - | chr5_1:21378442-21378461 | Msa0723580:intron | 20.0% |
| !!! | ACAAGTTTTTTTTTTTGTTC+AGG | + | chr5_1:21378594-21378613 | None:intergenic | 20.0% |
| !! | AAGAAATATGAAGTATATCA+AGG | - | chr5_1:21378722-21378741 | Msa0723580:CDS | 20.0% |
| !! | TGGTAATTAATTAACTTTCA+TGG | - | chr5_1:21379231-21379250 | Msa0723580:intron | 20.0% |
| !! | ATAGATTCATAAAGTAATAG+TGG | - | chr5_1:21379271-21379290 | Msa0723580:intron | 20.0% |
| !! | GAAATAATCAAAAAAGGTTA+TGG | - | chr5_1:21379445-21379464 | Msa0723580:intron | 20.0% |
| !! | AAAATTGGAAAGTTGAAATT+TGG | + | chr5_1:21379613-21379632 | None:intergenic | 20.0% |
| !!! | ATTTTTTCAAAGGAAAATAG+TGG | - | chr5_1:21379769-21379788 | Msa0723580:intron | 20.0% |
| !!! | TTTTATTTTGAGTATACAAG+TGG | - | chr5_1:21380317-21380336 | Msa0723580:intron | 20.0% |
| !!! | TTTTGCTTATAATATAGAGA+CGG | - | chr5_1:21380407-21380426 | Msa0723580:intron | 20.0% |
| !!! | TTGATTCTTTAGTTGTTTTA+AGG | + | chr5_1:21380477-21380496 | None:intergenic | 20.0% |
| !! | ATCTATATCTTGTAAAAGTT+TGG | + | chr5_1:21380759-21380778 | None:intergenic | 20.0% |
| !! | AGAAATTAATGCTTATATAC+AGG | - | chr5_1:21380934-21380953 | Msa0723580:CDS | 20.0% |
| !!! | TACATTGTTTAGAATTGTAA+AGG | + | chr5_1:21381102-21381121 | None:intergenic | 20.0% |
| !!! | GCTAATTTTTGTATAGAATA+TGG | + | chr5_1:21381449-21381468 | None:intergenic | 20.0% |
| !!! | TTTTGATATATCATGAACAT+TGG | - | chr5_1:21381489-21381508 | Msa0723580:CDS | 20.0% |
| !! | TGACAGAAAATCTATTAAAA+TGG | - | chr5_1:21381523-21381542 | Msa0723580:CDS | 20.0% |
| !!! | ATATTTTTTTAATTCCGTGT+AGG | - | chr5_1:21382024-21382043 | Msa0723580:intron | 20.0% |
| !! | TAAATTTAGTTGTTATGTGT+TGG | - | chr5_1:21383045-21383064 | Msa0723580:intron | 20.0% |
| !!! | AAGTTTTGTATTAAAGAGAA+TGG | - | chr5_1:21383072-21383091 | Msa0723580:intron | 20.0% |
| !! | GAAATGTTAAGTTGTTAATG+AGG | - | chr5_1:21377491-21377510 | Msa0723580:CDS | 25.0% |
| !! | AATGTTAAGTTGTTAATGAG+GGG | - | chr5_1:21377493-21377512 | Msa0723580:CDS | 25.0% |
| ! | ATAAAATACCCAAAATGTAG+TGG | + | chr5_1:21377748-21377767 | None:intergenic | 25.0% |
| ! | ATGTAACACTTGAACAATTT+GGG | + | chr5_1:21378102-21378121 | None:intergenic | 25.0% |
| ! | TATGTAACACTTGAACAATT+TGG | + | chr5_1:21378103-21378122 | None:intergenic | 25.0% |
| !! | GTTTTCCTAGAATATTCAAT+TGG | + | chr5_1:21378450-21378469 | None:intergenic | 25.0% |
| ! | TAGGAAAACAATATTCCATT+AGG | - | chr5_1:21378461-21378480 | Msa0723580:intron | 25.0% |
| ! | TTGTTCAGGAAAATAATACA+AGG | + | chr5_1:21378580-21378599 | None:intergenic | 25.0% |
| ! | ATGGATAAATCTCATTTGTT+AGG | + | chr5_1:21378638-21378657 | None:intergenic | 25.0% |
| ! | ATCACAAGATAACTTGAATT+TGG | + | chr5_1:21378899-21378918 | None:intergenic | 25.0% |
| !! | TTCAAGTTATCTTGTGATAT+TGG | - | chr5_1:21378901-21378920 | Msa0723580:intron | 25.0% |
| ! | TACTATGTTATAAGAAGGAA+GGG | - | chr5_1:21379097-21379116 | Msa0723580:intron | 25.0% |
| ! | CAGGTAGAAATAATCAAAAA+AGG | - | chr5_1:21379439-21379458 | Msa0723580:intron | 25.0% |
| ! | TCAGAACAATCATTGAAAAT+TGG | + | chr5_1:21379628-21379647 | None:intergenic | 25.0% |
| !!! | GAGTTTTTTATTGAAGAGAA+TGG | - | chr5_1:21380077-21380096 | Msa0723580:intron | 25.0% |
| !! | TTTTTATTGAAGAGAATGGA+TGG | - | chr5_1:21380081-21380100 | Msa0723580:intron | 25.0% |
| ! | TTATATCAGTGTCTTATCAT+GGG | + | chr5_1:21380562-21380581 | None:intergenic | 25.0% |
| ! | TATCATTTATGATACAACGT+TGG | - | chr5_1:21380639-21380658 | Msa0723580:CDS | 25.0% |
| ! | AAAAGTAAGATACGAGTTAA+AGG | - | chr5_1:21380883-21380902 | Msa0723580:intron | 25.0% |
| !! | TGTGTTGATATGCATATATT+TGG | + | chr5_1:21381205-21381224 | None:intergenic | 25.0% |
| ! | TGAACAATTGTCAATATAGT+CGG | - | chr5_1:21381357-21381376 | Msa0723580:intron | 25.0% |
| ! | ATCCAATATTACAAGATAAC+CGG | + | chr5_1:21381769-21381788 | None:intergenic | 25.0% |
| ! | TCCTTCTTATGACATAATAA+CGG | + | chr5_1:21381956-21381975 | None:intergenic | 25.0% |
| ! | TTATTATGTCATAAGAAGGA+AGG | - | chr5_1:21381956-21381975 | Msa0723580:intron | 25.0% |
| ! | TATTATGTCATAAGAAGGAA+GGG | - | chr5_1:21381957-21381976 | Msa0723580:intron | 25.0% |
| ! | AGTTATAATGTTCGATTCTA+AGG | + | chr5_1:21382112-21382131 | None:intergenic | 25.0% |
| ! | AAACTTAAATTCAAAGGAAG+AGG | - | chr5_1:21382328-21382347 | Msa0723580:intron | 25.0% |
| !! | TTTTAATATCATGGCCAAAA+TGG | + | chr5_1:21382376-21382395 | None:intergenic | 25.0% |
| ! | AATTCCTTGTGGTTTATTAA+GGG | - | chr5_1:21382487-21382506 | Msa0723580:CDS | 25.0% |
| ! | AATGACATTAAAGGAACAAA+TGG | - | chr5_1:21382688-21382707 | Msa0723580:intron | 25.0% |
| ! | ACATCAAATTAGGAGTAAAT+GGG | - | chr5_1:21383132-21383151 | Msa0723580:intron | 25.0% |
| !! | TATTTTGTGTTTCTAAGAGG+AGG | - | chr5_1:21377765-21377784 | Msa0723580:CDS | 30.0% |
| ATTTGAGTGATGAAACCATA+TGG | + | chr5_1:21377803-21377822 | None:intergenic | 30.0% | |
| ! | ACATTTTTCACATTTGTGCA+TGG | + | chr5_1:21377968-21377987 | None:intergenic | 30.0% |
| ATATACTGAACTGTATAAGC+AGG | - | chr5_1:21377995-21378014 | Msa0723580:CDS | 30.0% | |
| !! | TGTTAGTAGCTTTGTTTCAT+GGG | - | chr5_1:21378208-21378227 | Msa0723580:CDS | 30.0% |
| ! | TTCCATTGTGTATATTGACT+TGG | + | chr5_1:21378414-21378433 | None:intergenic | 30.0% |
| ! | ACTAGGATTCTTTTTGTACA+TGG | + | chr5_1:21378849-21378868 | None:intergenic | 30.0% |
| TTATCTTGTGATATTGGATG+AGG | - | chr5_1:21378907-21378926 | Msa0723580:intron | 30.0% | |
| ! | GCTCAAACTTACTATTGTTT+TGG | - | chr5_1:21378932-21378951 | Msa0723580:intron | 30.0% |
| TGGTTAAATTCTTGTTCTGA+GGG | + | chr5_1:21378994-21379013 | None:intergenic | 30.0% | |
| ATGGTTAAATTCTTGTTCTG+AGG | + | chr5_1:21378995-21379014 | None:intergenic | 30.0% | |
| TTAACCATCAAGTATTCATC+AGG | - | chr5_1:21379007-21379026 | Msa0723580:intron | 30.0% | |
| ATCGCTACTATGTTATAAGA+AGG | - | chr5_1:21379092-21379111 | Msa0723580:intron | 30.0% | |
| CTACTATGTTATAAGAAGGA+AGG | - | chr5_1:21379096-21379115 | Msa0723580:intron | 30.0% | |
| ACTATGTTATAAGAAGGAAG+GGG | - | chr5_1:21379098-21379117 | Msa0723580:intron | 30.0% | |
| ! | AAGTTTTTCTCTCATGTCAA+CGG | - | chr5_1:21379174-21379193 | Msa0723580:intron | 30.0% |
| !! | ACCTGTTGATAATCATTGAA+GGG | + | chr5_1:21379424-21379443 | None:intergenic | 30.0% |
| !! | TACCTGTTGATAATCATTGA+AGG | + | chr5_1:21379425-21379444 | None:intergenic | 30.0% |
| GAAAAAAAGGTGGAAACTTA+AGG | - | chr5_1:21379519-21379538 | Msa0723580:intron | 30.0% | |
| TTGTCCATTTATGTTTGTGA+AGG | - | chr5_1:21379672-21379691 | Msa0723580:intron | 30.0% | |
| GAAGGAGAGAATGAATTTAA+AGG | - | chr5_1:21379690-21379709 | Msa0723580:intron | 30.0% | |
| !!! | ATGGGAGAAGATTTTTTCAA+AGG | - | chr5_1:21379759-21379778 | Msa0723580:intron | 30.0% |
| TATTCAAACAGAAGTTGCTA+AGG | - | chr5_1:21379819-21379838 | Msa0723580:intron | 30.0% | |
| ! | TGTTTGGGATGAAAATAGAT+TGG | - | chr5_1:21379858-21379877 | Msa0723580:intron | 30.0% |
| ! | GATGAAAATAGATTGGTTGA+TGG | - | chr5_1:21379865-21379884 | Msa0723580:intron | 30.0% |
| GAAAAATGTTGGATTGAGTT+TGG | - | chr5_1:21379915-21379934 | Msa0723580:intron | 30.0% | |
| ACAAAAGTTGAAGAGTTTGA+TGG | - | chr5_1:21380012-21380031 | Msa0723580:intron | 30.0% | |
| AGTTTGATGGAACAAATAAG+TGG | - | chr5_1:21380025-21380044 | Msa0723580:intron | 30.0% | |
| ACATCAAATTAGGAGCAAAT+GGG | - | chr5_1:21380137-21380156 | Msa0723580:intron | 30.0% | |
| ATAAAAGAGCTAAAATGTGC+TGG | + | chr5_1:21380303-21380322 | None:intergenic | 30.0% | |
| CTTATATCAGTGTCTTATCA+TGG | + | chr5_1:21380563-21380582 | None:intergenic | 30.0% | |
| ! | TAACGTGGAAACTTTAAAAG+CGG | - | chr5_1:21380683-21380702 | Msa0723580:CDS | 30.0% |
| !!! | CGAGTTAAAGGTATTTTTGA+CGG | - | chr5_1:21380895-21380914 | Msa0723580:CDS | 30.0% |
| !!! | GAGTTAAAGGTATTTTTGAC+GGG | - | chr5_1:21380896-21380915 | Msa0723580:CDS | 30.0% |
| ! | GTTTAGAATTGTAAAGGAAG+AGG | + | chr5_1:21381096-21381115 | None:intergenic | 30.0% |
| TTCTCTTATTACTTTACGCT+TGG | - | chr5_1:21381240-21381259 | Msa0723580:intron | 30.0% | |
| TTTAATTGATGTCATATGCC+AGG | + | chr5_1:21381411-21381430 | None:intergenic | 30.0% | |
| TCATACATAGTCTAATCACT+AGG | - | chr5_1:21381665-21381684 | Msa0723580:CDS | 30.0% | |
| CATACATAGTCTAATCACTA+GGG | - | chr5_1:21381666-21381685 | Msa0723580:CDS | 30.0% | |
| ATTACAAGATAACCGGAATT+TGG | + | chr5_1:21381762-21381781 | None:intergenic | 30.0% | |
| TTCCGGTTATCTTGTAATAT+TGG | - | chr5_1:21381764-21381783 | Msa0723580:intron | 30.0% | |
| TGGTTAAATGTTTGTTCTGA+GGG | + | chr5_1:21381857-21381876 | None:intergenic | 30.0% | |
| ATGGTTAAATGTTTGTTCTG+AGG | + | chr5_1:21381858-21381877 | None:intergenic | 30.0% | |
| ! | TTAACCATCAGTGATTTTGA+AGG | - | chr5_1:21381870-21381889 | Msa0723580:intron | 30.0% |
| TATACCTTCAAAATCACTGA+TGG | + | chr5_1:21381877-21381896 | None:intergenic | 30.0% | |
| AGAAAATGTCATGTTTCTTC+CGG | - | chr5_1:21381905-21381924 | Msa0723580:intron | 30.0% | |
| TAATAACGGTTTGAAGACAA+TGG | + | chr5_1:21381942-21381961 | None:intergenic | 30.0% | |
| ACCGTTATTATGTCATAAGA+AGG | - | chr5_1:21381952-21381971 | Msa0723580:intron | 30.0% | |
| ATTATGTCATAAGAAGGAAG+GGG | - | chr5_1:21381958-21381977 | Msa0723580:intron | 30.0% | |
| TATGTCTTAAGCACACAATA+AGG | + | chr5_1:21382177-21382196 | None:intergenic | 30.0% | |
| ! | AGACATATTTTTCACGTTCT+AGG | - | chr5_1:21382215-21382234 | Msa0723580:intron | 30.0% |
| ! | CCTTTGAATTTAAGTTTGCT+TGG | + | chr5_1:21382325-21382344 | None:intergenic | 30.0% |
| CCAAGCAAACTTAAATTCAA+AGG | - | chr5_1:21382322-21382341 | Msa0723580:intron | 30.0% | |
| !!! | AGGGACTTGTTTTAATATCA+TGG | + | chr5_1:21382385-21382404 | None:intergenic | 30.0% |
| TGATATTAAAACAAGTCCCT+TGG | - | chr5_1:21382385-21382404 | Msa0723580:intron | 30.0% | |
| ! | GAAATAAGCAAGAAACGTTT+TGG | - | chr5_1:21382434-21382453 | Msa0723580:CDS | 30.0% |
| GAATTCCTTGTGGTTTATTA+AGG | - | chr5_1:21382486-21382505 | Msa0723580:CDS | 30.0% | |
| ! | TTTTCCCTTAATAAACCACA+AGG | + | chr5_1:21382494-21382513 | None:intergenic | 30.0% |
| GTTTATTAAGGGAAAAAGTG+TGG | - | chr5_1:21382498-21382517 | Msa0723580:CDS | 30.0% | |
| AAAGTTGAAATCTGGTAGTT+TGG | + | chr5_1:21382594-21382613 | None:intergenic | 30.0% | |
| !! | GATAATGGAAAGTTGAAATC+TGG | + | chr5_1:21382602-21382621 | None:intergenic | 30.0% |
| ! | ATACCATTTTCCAACAAGAA+CGG | + | chr5_1:21382642-21382661 | None:intergenic | 30.0% |
| ! | TTGTCCTTTTATGTTTGTGA+AGG | - | chr5_1:21382661-21382680 | Msa0723580:intron | 30.0% |
| TATTCAAACAGAAGTTGCTA+AGG | - | chr5_1:21379819-21379838 | Msa0723580:intron | 30.0% | |
| TATTCGGGATGAAAATAGAT+TGG | - | chr5_1:21382853-21382872 | Msa0723580:intron | 30.0% | |
| ! | GATGAAAATAGATTGGTTGA+TGG | - | chr5_1:21379865-21379884 | Msa0723580:intron | 30.0% |
| ! | AGTGTTGAAGATAAAAGTGT+TGG | - | chr5_1:21382899-21382918 | Msa0723580:intron | 30.0% |
| !! | TAAAAGTGTTGGATTGAGTT+TGG | - | chr5_1:21382910-21382929 | Msa0723580:intron | 30.0% |
| GTAACAAAACTTGAAGAGTT+TGG | - | chr5_1:21383004-21383023 | Msa0723580:intron | 30.0% | |
| CACATCAAATTAGGAGTAAA+TGG | - | chr5_1:21383131-21383150 | Msa0723580:intron | 30.0% | |
| AATCACGTTCTCAACTTCAT+TGG | - | chr5_1:21377884-21377903 | Msa0723580:CDS | 35.0% | |
| ! | TTTTTCACATTTGTGCATGG+CGG | + | chr5_1:21377965-21377984 | None:intergenic | 35.0% |
| AAGTGCTTATGACTTCAACT+GGG | - | chr5_1:21378149-21378168 | Msa0723580:CDS | 35.0% | |
| ATAGATGAACAAGCCATCAA+TGG | + | chr5_1:21378185-21378204 | None:intergenic | 35.0% | |
| !! | TTGATGGCTTGTTCATCTAT+TGG | - | chr5_1:21378185-21378204 | Msa0723580:CDS | 35.0% |
| !! | GTGTTAGTAGCTTTGTTTCA+TGG | - | chr5_1:21378207-21378226 | Msa0723580:CDS | 35.0% |
| !! | GTTAGTAGCTTTGTTTCATG+GGG | - | chr5_1:21378209-21378228 | Msa0723580:CDS | 35.0% |
| !! | GGATTCAACTTGTTGAGAAA+AGG | - | chr5_1:21378388-21378407 | Msa0723580:intron | 35.0% |
| CTACTATCATTCTTGCCTAA+TGG | + | chr5_1:21378479-21378498 | None:intergenic | 35.0% | |
| GAATGATAGTAGTATGTACG+TGG | - | chr5_1:21378487-21378506 | Msa0723580:intron | 35.0% | |
| !! | AAATTCTTGTTCTGAGGGAT+AGG | + | chr5_1:21378989-21379008 | None:intergenic | 35.0% |
| TTCACCTGATGAATACTTGA+TGG | + | chr5_1:21379014-21379033 | None:intergenic | 35.0% | |
| GAATGAACATAGCTTCTTCA+TGG | + | chr5_1:21379045-21379064 | None:intergenic | 35.0% | |
| ! | GACAATGGTTGATTCAATAC+TGG | + | chr5_1:21379067-21379086 | None:intergenic | 35.0% |
| TAGTACAAGTTCAAAGGAAG+AGG | - | chr5_1:21379339-21379358 | Msa0723580:intron | 35.0% | |
| ! | AAAACTACAGCAAAAGCATG+TGG | + | chr5_1:21379371-21379390 | None:intergenic | 35.0% |
| !!! | CTTTTTTTCCTCAATAACCC+AGG | + | chr5_1:21379508-21379527 | None:intergenic | 35.0% |
| CTGGGTTATTGAGGAAAAAA+AGG | - | chr5_1:21379506-21379525 | Msa0723580:intron | 35.0% | |
| GGTTATTGAGGAAAAAAAGG+TGG | - | chr5_1:21379509-21379528 | Msa0723580:intron | 35.0% | |
| AATCATTTGAGCCTAAAGCT+TGG | + | chr5_1:21379573-21379592 | None:intergenic | 35.0% | |
| ! | CAATGATTGTTCTGAATCAG+TGG | - | chr5_1:21379633-21379652 | Msa0723580:intron | 35.0% |
| CTCTCCTTCACAAACATAAA+TGG | + | chr5_1:21379679-21379698 | None:intergenic | 35.0% | |
| ! | TCAAAGGAAAATAGTGGAGA+AGG | - | chr5_1:21379775-21379794 | Msa0723580:intron | 35.0% |
| !! | AGTTTTGTGGTTTAAGAGTG+TGG | - | chr5_1:21379888-21379907 | Msa0723580:intron | 35.0% |
| AGTGTGGATGAGAAAAATGT+TGG | - | chr5_1:21379904-21379923 | Msa0723580:intron | 35.0% | |
| ATTGAGTTTGGAAGTTGTTG+AGG | - | chr5_1:21379927-21379946 | Msa0723580:intron | 35.0% | |
| TTGAGTTTGGAAGTTGTTGA+GGG | - | chr5_1:21379928-21379947 | Msa0723580:intron | 35.0% | |
| AAGTTGTTGAGGGAATGAAA+TGG | - | chr5_1:21379938-21379957 | Msa0723580:intron | 35.0% | |
| AGTTGTTGAGGGAATGAAAT+GGG | - | chr5_1:21379939-21379958 | Msa0723580:intron | 35.0% | |
| GAATGAAATGGGAACAAAGA+AGG | - | chr5_1:21379950-21379969 | Msa0723580:intron | 35.0% | |
| AAATGGGAACAAAGAAGGTT+TGG | - | chr5_1:21379955-21379974 | Msa0723580:intron | 35.0% | |
| TCAGACACTCACATCAAATT+AGG | - | chr5_1:21380127-21380146 | Msa0723580:intron | 35.0% | |
| CACATCAAATTAGGAGCAAA+TGG | - | chr5_1:21380136-21380155 | Msa0723580:intron | 35.0% | |
| TGCTTATAATATAGAGACGG+AGG | - | chr5_1:21380410-21380429 | Msa0723580:intron | 35.0% | |
| TATTGCACAATAGCATTCAC+TGG | - | chr5_1:21380602-21380621 | Msa0723580:CDS | 35.0% | |
| ATTGCACAATAGCATTCACT+GGG | - | chr5_1:21380603-21380622 | Msa0723580:CDS | 35.0% | |
| TGCAACATAAGAACATAACG+TGG | - | chr5_1:21380668-21380687 | Msa0723580:CDS | 35.0% | |
| ! | AACGTGGAAACTTTAAAAGC+GGG | - | chr5_1:21380684-21380703 | Msa0723580:CDS | 35.0% |
| !! | ATATTTGCTTTGGAGAGTGT+GGG | + | chr5_1:21380812-21380831 | None:intergenic | 35.0% |
| !! | AATATTTGCTTTGGAGAGTG+TGG | + | chr5_1:21380813-21380832 | None:intergenic | 35.0% |
| CACTTCAAGAAACAACATTG+TGG | - | chr5_1:21380976-21380995 | Msa0723580:CDS | 35.0% | |
| ! | TCTTGCATGACAAGTATTGT+AGG | + | chr5_1:21381002-21381021 | None:intergenic | 35.0% |
| CAATACTTGTCATGCAAGAA+AGG | - | chr5_1:21381003-21381022 | Msa0723580:CDS | 35.0% | |
| ! | TTGAAGTGCTAAGACAAGTA+AGG | + | chr5_1:21381047-21381066 | None:intergenic | 35.0% |
| AGGACCAAGTCAATTGATAA+TGG | - | chr5_1:21381274-21381293 | Msa0723580:intron | 35.0% | |
| TACGCCATTATCAATTGACT+TGG | + | chr5_1:21381281-21381300 | None:intergenic | 35.0% | |
| GCTCAAACTTACTCTTTCTT+TGG | - | chr5_1:21381795-21381814 | Msa0723580:intron | 35.0% | |
| !! | CTTACTCTTTCTTTGGTTTG+TGG | - | chr5_1:21381802-21381821 | Msa0723580:intron | 35.0% |
| !! | AAATGTTTGTTCTGAGGGAA+AGG | + | chr5_1:21381852-21381871 | None:intergenic | 35.0% |
| ! | GACAATGGTTGATTCAATAC+CGG | + | chr5_1:21379067-21379086 | None:intergenic | 35.0% |
| ! | TGAATTTAAGTTTGCTTGGC+TGG | + | chr5_1:21382321-21382340 | None:intergenic | 35.0% |
| ! | TCACTCAAATGGTAGTTTGT+AGG | + | chr5_1:21382542-21382561 | None:intergenic | 35.0% |
| TCAGAACGATCATTGGATAA+TGG | + | chr5_1:21382617-21382636 | None:intergenic | 35.0% | |
| AATCCGTTCTTGTTGGAAAA+TGG | - | chr5_1:21382636-21382655 | Msa0723580:intron | 35.0% | |
| CCTTCCTTCACAAACATAAA+AGG | + | chr5_1:21382668-21382687 | None:intergenic | 35.0% | |
| ! | CCTTTTATGTTTGTGAAGGA+AGG | - | chr5_1:21382665-21382684 | Msa0723580:intron | 35.0% |
| GAAGGAAGGAATGACATTAA+AGG | - | chr5_1:21382679-21382698 | Msa0723580:intron | 35.0% | |
| ATTGAGTTTGGAAGTTGTTG+AGG | - | chr5_1:21379927-21379946 | Msa0723580:intron | 35.0% | |
| TTGAGTTTGGAAGTTGTTGA+GGG | - | chr5_1:21379928-21379947 | Msa0723580:intron | 35.0% | |
| AAGTTGTTGAGGGAATGAAA+TGG | - | chr5_1:21379938-21379957 | Msa0723580:intron | 35.0% | |
| AGTTGTTGAGGGAATGAAAT+GGG | - | chr5_1:21379939-21379958 | Msa0723580:intron | 35.0% | |
| GAATGAAATGGGAACAAGAA+AGG | - | chr5_1:21382945-21382964 | Msa0723580:intron | 35.0% | |
| AAATGGGAACAAGAAAGGTT+TGG | - | chr5_1:21382950-21382969 | Msa0723580:intron | 35.0% | |
| ACAAAACTTGAAGAGTTTGG+TGG | - | chr5_1:21383007-21383026 | Msa0723580:intron | 35.0% | |
| ! | AGTTTGGTGGAACAAACAAA+TGG | - | chr5_1:21383020-21383039 | Msa0723580:intron | 35.0% |
| TCAGACTCTCACATCAAATT+AGG | - | chr5_1:21383122-21383141 | Msa0723580:intron | 35.0% | |
| AAAGGCCTTCAATAGTGTCA+CGG | + | chr5_1:21377520-21377539 | None:intergenic | 40.0% | |
| !!! | TGTCTTTGGGACACCTTTTA+AGG | + | chr5_1:21377635-21377654 | None:intergenic | 40.0% |
| AACGACTGTCTCTTGTCTTT+GGG | + | chr5_1:21377648-21377667 | None:intergenic | 40.0% | |
| TAACGACTGTCTCTTGTCTT+TGG | + | chr5_1:21377649-21377668 | None:intergenic | 40.0% | |
| ACAAGAGACAGTCGTTAACA+AGG | - | chr5_1:21377652-21377671 | Msa0723580:CDS | 40.0% | |
| CAAGAGACAGTCGTTAACAA+GGG | - | chr5_1:21377653-21377672 | Msa0723580:CDS | 40.0% | |
| ! | TGATGTGAGCCACTACATTT+TGG | - | chr5_1:21377736-21377755 | Msa0723580:CDS | 40.0% |
| ! | GATGTGAGCCACTACATTTT+GGG | - | chr5_1:21377737-21377756 | Msa0723580:CDS | 40.0% |
| ACTGAACTGTATAAGCAGGA+TGG | - | chr5_1:21377999-21378018 | Msa0723580:CDS | 40.0% | |
| CTGAACTGTATAAGCAGGAT+GGG | - | chr5_1:21378000-21378019 | Msa0723580:CDS | 40.0% | |
| !! | TAAGCAGGATGGGAGTATTA+AGG | - | chr5_1:21378010-21378029 | Msa0723580:CDS | 40.0% |
| ! | AGTCCTTGAAAGCATGGAAA+TGG | - | chr5_1:21378064-21378083 | Msa0723580:CDS | 40.0% |
| TTGAAGTCATAAGCACTTGC+TGG | + | chr5_1:21378147-21378166 | None:intergenic | 40.0% | |
| CAAGTGCTTATGACTTCAAC+TGG | - | chr5_1:21378148-21378167 | Msa0723580:CDS | 40.0% | |
| GGCCAAGTCAATATACACAA+TGG | - | chr5_1:21378409-21378428 | Msa0723580:intron | 40.0% | |
| CGCGTTTGACTATTCATAAC+GGG | + | chr5_1:21378540-21378559 | None:intergenic | 40.0% | |
| CCGCGTTTGACTATTCATAA+CGG | + | chr5_1:21378541-21378560 | None:intergenic | 40.0% | |
| CCGTTATGAATAGTCAAACG+CGG | - | chr5_1:21378538-21378557 | Msa0723580:intron | 40.0% | |
| TAACTTGAATTTGGCCCTGA+TGG | + | chr5_1:21378890-21378909 | None:intergenic | 40.0% | |
| !!! | CTATTGTTTTGGTCTCTGCA+AGG | - | chr5_1:21378943-21378962 | Msa0723580:intron | 40.0% |
| TGAACATAGCTTCTTCATGG+CGG | + | chr5_1:21379042-21379061 | None:intergenic | 40.0% | |
| TAGTAGCGATTCGAAGACAA+TGG | + | chr5_1:21379082-21379101 | None:intergenic | 40.0% | |
| AGAAGGAAGGGGAAATATCA+AGG | - | chr5_1:21379109-21379128 | Msa0723580:intron | 40.0% | |
| GAAGGAAGGGGAAATATCAA+GGG | - | chr5_1:21379110-21379129 | Msa0723580:intron | 40.0% | |
| CCTTTGAACTTGTACTAGCT+TGG | + | chr5_1:21379336-21379355 | None:intergenic | 40.0% | |
| CCAAGCTAGTACAAGTTCAA+AGG | - | chr5_1:21379333-21379352 | Msa0723580:intron | 40.0% | |
| !! | TTGAAGGGCTCTAAAGCTAT+TGG | + | chr5_1:21379409-21379428 | None:intergenic | 40.0% |
| GCCCTTCAATGATTATCAAC+AGG | - | chr5_1:21379420-21379439 | Msa0723580:intron | 40.0% | |
| ! | TTTTTCCTCAATAACCCAGG+AGG | + | chr5_1:21379505-21379524 | None:intergenic | 40.0% |
| CTAAAGCTTGGCTTAAATGG+TGG | + | chr5_1:21379561-21379580 | None:intergenic | 40.0% | |
| CACCATTTAAGCCAAGCTTT+AGG | - | chr5_1:21379559-21379578 | Msa0723580:intron | 40.0% | |
| AGCCTAAAGCTTGGCTTAAA+TGG | + | chr5_1:21379564-21379583 | None:intergenic | 40.0% | |
| ! | TGTTCTGAATCAGTGGTTGT+TGG | - | chr5_1:21379640-21379659 | Msa0723580:intron | 40.0% |
| AATCAGTGGTTGTTGGAAAG+TGG | - | chr5_1:21379647-21379666 | Msa0723580:intron | 40.0% | |
| AGCTAACACTTGAGCAAAGA+TGG | - | chr5_1:21379740-21379759 | Msa0723580:intron | 40.0% | |
| GCTAACACTTGAGCAAAGAT+GGG | - | chr5_1:21379741-21379760 | Msa0723580:intron | 40.0% | |
| ! | AAGGAAAATAGTGGAGAAGG+TGG | - | chr5_1:21379778-21379797 | Msa0723580:intron | 40.0% |
| ACAGAAGTTGCTAAGGTTGA+AGG | - | chr5_1:21379826-21379845 | Msa0723580:intron | 40.0% | |
| AGTTGCTAAGGTTGAAGGAA+AGG | - | chr5_1:21379831-21379850 | Msa0723580:intron | 40.0% | |
| !!! | GATTGGTTGATGGAGTTTTG+TGG | - | chr5_1:21379875-21379894 | Msa0723580:intron | 40.0% |
| ! | ATATAGAGACGGAGGCATAA+TGG | - | chr5_1:21380418-21380437 | Msa0723580:intron | 40.0% |
| ! | TATAGAGACGGAGGCATAAT+GGG | - | chr5_1:21380419-21380438 | Msa0723580:intron | 40.0% |
| GATTACTCTCAAATACCCAC+CGG | - | chr5_1:21380776-21380795 | Msa0723580:CDS | 40.0% | |
| AAGTGCTAAGACAAGTAAGG+TGG | + | chr5_1:21381044-21381063 | None:intergenic | 40.0% | |
| ! | TACGCTTGGCTTCTAAAGAA+AGG | - | chr5_1:21381254-21381273 | Msa0723580:intron | 40.0% |
| ACCTAGTATTTGTCACTACC+TGG | - | chr5_1:21381390-21381409 | Msa0723580:intron | 40.0% | |
| TAGGGAAAATGTATGCAGCA+AGG | - | chr5_1:21381684-21381703 | Msa0723580:CDS | 40.0% | |
| ! | GGTTCCTTTTGTACATGGAA+AGG | + | chr5_1:21381712-21381731 | None:intergenic | 40.0% |
| ! | ACTAGGGTTCCTTTTGTACA+TGG | + | chr5_1:21381717-21381736 | None:intergenic | 40.0% |
| !! | TGGTATCTGAAAGAGCACTA+GGG | + | chr5_1:21381733-21381752 | None:intergenic | 40.0% |
| !! | ATGGTATCTGAAAGAGCACT+AGG | + | chr5_1:21381734-21381753 | None:intergenic | 40.0% |
| ATACCATCAGGTCCAAATTC+CGG | - | chr5_1:21381747-21381766 | Msa0723580:intron | 40.0% | |
| !! | CTCTTTCTTTGGTTTGTGGA+AGG | - | chr5_1:21381806-21381825 | Msa0723580:intron | 40.0% |
| !! | TTTGGTTTGTGGAAGGACAT+TGG | - | chr5_1:21381813-21381832 | Msa0723580:intron | 40.0% |
| TTGTGGAAGGACATTGGTAT+TGG | - | chr5_1:21381819-21381838 | Msa0723580:intron | 40.0% | |
| TGTGGAAGGACATTGGTATT+GGG | - | chr5_1:21381820-21381839 | Msa0723580:intron | 40.0% | |
| CATCAATTGAGCTACCTACA+CGG | + | chr5_1:21382041-21382060 | None:intergenic | 40.0% | |
| !! | ACTAGTGTATGCTGCCATTT+TGG | - | chr5_1:21382359-21382378 | Msa0723580:intron | 40.0% |
| ! | CAAATGGTAGTTTGTAGGAG+TGG | + | chr5_1:21382537-21382556 | None:intergenic | 40.0% |
| ! | CAAGGAATCATTTGAAGCCA+AGG | + | chr5_1:21382567-21382586 | None:intergenic | 40.0% |
| ! | AACGGATTCAGAACGATCAT+TGG | + | chr5_1:21382624-21382643 | None:intergenic | 40.0% |
| ACAGAAGTTGCTAAGGTTGA+AGG | - | chr5_1:21379826-21379845 | Msa0723580:intron | 40.0% | |
| AGTTGCTAAGGTTGAAGGAA+AGG | - | chr5_1:21379831-21379850 | Msa0723580:intron | 40.0% | |
| TTGAAGGAAAGGACGCTATT+CGG | - | chr5_1:21382837-21382856 | Msa0723580:intron | 40.0% | |
| !!! | GATTGGTTGATGGAGTTTTG+TGG | - | chr5_1:21379875-21379894 | Msa0723580:intron | 40.0% |
| AAAGGTTTGGATGGAATGCT+GGG | - | chr5_1:21382963-21382982 | Msa0723580:intron | 40.0% | |
| AGGTGCACTAATCAGCCATA+TGG | - | chr5_1:21377785-21377804 | Msa0723580:CDS | 45.0% | |
| TAGAGGAGTCCTTGAAAGCA+TGG | - | chr5_1:21378058-21378077 | Msa0723580:CDS | 45.0% | |
| GCACCATTTCCATGCTTTCA+AGG | + | chr5_1:21378070-21378089 | None:intergenic | 45.0% | |
| ! | AGCACTTGCTGGTAGACTTA+AGG | + | chr5_1:21378136-21378155 | None:intergenic | 45.0% |
| TGAACAAGCCATCAATGGCA+GGG | + | chr5_1:21378180-21378199 | None:intergenic | 45.0% | |
| ATGAACAAGCCATCAATGGC+AGG | + | chr5_1:21378181-21378200 | None:intergenic | 45.0% | |
| !! | AGCTTTGTTTCATGGGGAGA+AGG | - | chr5_1:21378215-21378234 | Msa0723580:CDS | 45.0% |
| AGAGAGAGAGAGAGAGAGAA+GGG | - | chr5_1:21378274-21378293 | Msa0723580:intron | 45.0% | |
| GAACATAGCTTCTTCATGGC+GGG | + | chr5_1:21379041-21379060 | None:intergenic | 45.0% | |
| GCAAAATCAGTTGCCTCAGA+TGG | - | chr5_1:21379475-21379494 | Msa0723580:intron | 45.0% | |
| GAATTCCTCCTGGGTTATTG+AGG | - | chr5_1:21379497-21379516 | Msa0723580:intron | 45.0% | |
| TTGGCTTAAATGGTGGTTGC+GGG | + | chr5_1:21379554-21379573 | None:intergenic | 45.0% | |
| CTTGGCTTAAATGGTGGTTG+CGG | + | chr5_1:21379555-21379574 | None:intergenic | 45.0% | |
| ! | ATTTGGTAGCTTCGAACGCA+AGG | + | chr5_1:21379596-21379615 | None:intergenic | 45.0% |
| TTGAAGGAAAGGACGCTGTT+TGG | - | chr5_1:21379842-21379861 | Msa0723580:intron | 45.0% | |
| TGAAGGAAAGGACGCTGTTT+GGG | - | chr5_1:21379843-21379862 | Msa0723580:intron | 45.0% | |
| GGGAACAAAGAAGGTTTGGA+TGG | - | chr5_1:21379959-21379978 | Msa0723580:intron | 45.0% | |
| AGAAGGTTTGGATGGAATGC+TGG | - | chr5_1:21379967-21379986 | Msa0723580:intron | 45.0% | |
| GAAGGTTTGGATGGAATGCT+GGG | - | chr5_1:21379968-21379987 | Msa0723580:intron | 45.0% | |
| TTTGGATGGAATGCTGGGAA+TGG | - | chr5_1:21379973-21379992 | Msa0723580:intron | 45.0% | |
| GGGAGTGGTTTACATGTACA+AGG | + | chr5_1:21380542-21380561 | None:intergenic | 45.0% | |
| TCAGTGTCTTATCATGGGAG+TGG | + | chr5_1:21380557-21380576 | None:intergenic | 45.0% | |
| CCAACATCGACAGTTAAGCA+CGG | - | chr5_1:21381176-21381195 | Msa0723580:intron | 45.0% | |
| GCCAGGTAGTGACAAATACT+AGG | + | chr5_1:21381394-21381413 | None:intergenic | 45.0% | |
| GGCTCCTTTCCATGTACAAA+AGG | - | chr5_1:21381705-21381724 | Msa0723580:CDS | 45.0% | |
| GTGCTCTTTCAGATACCATC+AGG | - | chr5_1:21381735-21381754 | Msa0723580:CDS | 45.0% | |
| TAACCGGAATTTGGACCTGA+TGG | + | chr5_1:21381753-21381772 | None:intergenic | 45.0% | |
| AGAAGGAAGGGGAAGAATCA+AGG | - | chr5_1:21381969-21381988 | Msa0723580:intron | 45.0% | |
| GAAGGAAGGGGAAGAATCAA+GGG | - | chr5_1:21381970-21381989 | Msa0723580:intron | 45.0% | |
| CTACCATTTGAGTGAAGCCT+TGG | - | chr5_1:21382547-21382566 | Msa0723580:CDS | 45.0% | |
| AAGCCAAGGCTTCACTCAAA+TGG | + | chr5_1:21382553-21382572 | None:intergenic | 45.0% | |
| ! | ATCTGGTAGTTTGGAACGCA+AGG | + | chr5_1:21382585-21382604 | None:intergenic | 45.0% |
| ! | CGTTCTGAATCCGTTCTTGT+TGG | - | chr5_1:21382629-21382648 | Msa0723580:intron | 45.0% |
| TGAAGGAAAGGACGCTATTC+GGG | - | chr5_1:21382838-21382857 | Msa0723580:intron | 45.0% | |
| GGGAACAAGAAAGGTTTGGA+TGG | - | chr5_1:21382954-21382973 | Msa0723580:intron | 45.0% | |
| GAAAGGTTTGGATGGAATGC+TGG | - | chr5_1:21382962-21382981 | Msa0723580:intron | 45.0% | |
| TTTGGATGGAATGCTGGGAA+GGG | - | chr5_1:21379973-21379992 | Msa0723580:intron | 45.0% | |
| ! | GGAGTATTAAGGACTCCCTC+AGG | - | chr5_1:21378021-21378040 | Msa0723580:CDS | 50.0% |
| GAGAGAGAGAGAGAGAGAGA+AGG | - | chr5_1:21378237-21378256 | Msa0723580:CDS | 50.0% | |
| GAGAGAGAGAGAGAGAGAAG+GGG | - | chr5_1:21378275-21378294 | Msa0723580:intron | 50.0% | |
| GAGAGAGAGAGAGAGAGAGA+AGG | - | chr5_1:21378237-21378256 | Msa0723580:CDS | 50.0% | |
| AGAGAGAGAGAGAGAGAGAG+AGG | - | chr5_1:21378238-21378257 | Msa0723580:CDS | 50.0% | |
| TATCAGACCCACCACCATCA+GGG | - | chr5_1:21378873-21378892 | Msa0723580:intron | 50.0% | |
| !! | AATTTGGCCCTGATGGTGGT+GGG | + | chr5_1:21378883-21378902 | None:intergenic | 50.0% |
| CTTGAATTTGGCCCTGATGG+TGG | + | chr5_1:21378887-21378906 | None:intergenic | 50.0% | |
| CCTCAGATGGAATTCCTCCT+GGG | - | chr5_1:21379488-21379507 | Msa0723580:intron | 50.0% | |
| TGGCTTAAATGGTGGTTGCG+GGG | + | chr5_1:21379553-21379572 | None:intergenic | 50.0% | |
| CCGTGCTTAACTGTCGATGT+TGG | + | chr5_1:21381179-21381198 | None:intergenic | 50.0% | |
| ACCACAAGGAATTCCATCCG+AGG | + | chr5_1:21382480-21382499 | None:intergenic | 50.0% | |
| AGTTGACGCTCGAGCAAAGA+TGG | - | chr5_1:21382729-21382748 | Msa0723580:intron | 50.0% | |
| GTTGACGCTCGAGCAAAGAT+GGG | - | chr5_1:21382730-21382749 | Msa0723580:intron | 50.0% | |
| GTTTGGATGGAATGCTGGGA+AGG | - | chr5_1:21379972-21379991 | Msa0723580:intron | 50.0% | |
| GGGGTCCGTGACACTATTGA+AGG | - | chr5_1:21377512-21377531 | Msa0723580:CDS | 55.0% | |
| GGGTCTTTCCCTGCCATTGA+TGG | - | chr5_1:21378169-21378188 | Msa0723580:CDS | 55.0% | |
| GAGAGAGAGAGAGAGAGAGG+AGG | - | chr5_1:21378367-21378386 | Msa0723580:intron | 55.0% | |
| ! | GGTGGGTCTGATAGAGCACT+AGG | + | chr5_1:21378866-21378885 | None:intergenic | 55.0% |
| CTATCAGACCCACCACCATC+AGG | - | chr5_1:21378872-21378891 | Msa0723580:intron | 55.0% | |
| !! | GAATTTGGCCCTGATGGTGG+TGG | + | chr5_1:21378884-21378903 | None:intergenic | 55.0% |
| ! | CATAGCTTCTTCATGGCGGG+TGG | + | chr5_1:21379038-21379057 | None:intergenic | 55.0% |
| GCCTCAGATGGAATTCCTCC+TGG | - | chr5_1:21379487-21379506 | Msa0723580:intron | 55.0% | |
| CCCAGGAGGAATTCCATCTG+AGG | + | chr5_1:21379491-21379510 | None:intergenic | 55.0% | |
| ! | TTTGGAGAGTGTGGGTGCAC+TGG | + | chr5_1:21380804-21380823 | None:intergenic | 55.0% |
| TCATGCCGAGTCAGTTGCCT+CGG | - | chr5_1:21382460-21382479 | Msa0723580:CDS | 55.0% | |
| TCCATCCGAGGCAACTGACT+CGG | + | chr5_1:21382468-21382487 | None:intergenic | 55.0% | |
| GCCTCGGATGGAATTCCTTG+TGG | - | chr5_1:21382476-21382495 | Msa0723580:CDS | 55.0% | |
| TCCCTCAGGAACCGCTGCAT+CGG | - | chr5_1:21378035-21378054 | Msa0723580:CDS | 60.0% | |
| ACCGATGCAGCGGTTCCTGA+GGG | + | chr5_1:21378039-21378058 | None:intergenic | 60.0% | |
| TACCGATGCAGCGGTTCCTG+AGG | + | chr5_1:21378040-21378059 | None:intergenic | 60.0% | |
| ! | AGGAACCGCTGCATCGGTAG+AGG | - | chr5_1:21378041-21378060 | Msa0723580:CDS | 60.0% |
| GGACTCCTCTACCGATGCAG+CGG | + | chr5_1:21378049-21378068 | None:intergenic | 60.0% | |
| GAGTGTGGGTGCACTGGAGC+CGG | + | chr5_1:21380798-21380817 | None:intergenic | 65.0% | |
| GCCGAGTCAGTTGCCTCGGA+TGG | - | chr5_1:21382464-21382483 | Msa0723580:CDS | 65.0% | |
| GTGGGTGCACTGGAGCCGGT+GGG | + | chr5_1:21380794-21380813 | None:intergenic | 70.0% | |
| TGTGGGTGCACTGGAGCCGG+TGG | + | chr5_1:21380795-21380814 | None:intergenic | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr5_1 | gene | 21377423 | 21383159 | 21377423 | ID=Msa0723580;Name=Msa0723580 |
| chr5_1 | mRNA | 21377423 | 21383159 | 21377423 | ID=Msa0723580-mRNA-1;Parent=Msa0723580;Name=Msa0723580-mRNA-1;_AED=0.22;_eAED=0.25;_QI=0|0.11|0|1|0.11|0.1|10|0|709 |
| chr5_1 | exon | 21383134 | 21383159 | 21383134 | ID=Msa0723580-mRNA-1:exon:8085;Parent=Msa0723580-mRNA-1 |
| chr5_1 | exon | 21382432 | 21382568 | 21382432 | ID=Msa0723580-mRNA-1:exon:8084;Parent=Msa0723580-mRNA-1 |
| chr5_1 | exon | 21381629 | 21381763 | 21381629 | ID=Msa0723580-mRNA-1:exon:8083;Parent=Msa0723580-mRNA-1 |
| chr5_1 | exon | 21381451 | 21381553 | 21381451 | ID=Msa0723580-mRNA-1:exon:8082;Parent=Msa0723580-mRNA-1 |
| chr5_1 | exon | 21381183 | 21381249 | 21381183 | ID=Msa0723580-mRNA-1:exon:8081;Parent=Msa0723580-mRNA-1 |
| chr5_1 | exon | 21380895 | 21381140 | 21380895 | ID=Msa0723580-mRNA-1:exon:8080;Parent=Msa0723580-mRNA-1 |
| chr5_1 | exon | 21380751 | 21380888 | 21380751 | ID=Msa0723580-mRNA-1:exon:8079;Parent=Msa0723580-mRNA-1 |
| chr5_1 | exon | 21380517 | 21380741 | 21380517 | ID=Msa0723580-mRNA-1:exon:8078;Parent=Msa0723580-mRNA-1 |
| chr5_1 | exon | 21378666 | 21378880 | 21378666 | ID=Msa0723580-mRNA-1:exon:8077;Parent=Msa0723580-mRNA-1 |
| chr5_1 | exon | 21377423 | 21378260 | 21377423 | ID=Msa0723580-mRNA-1:exon:8076;Parent=Msa0723580-mRNA-1 |
| chr5_1 | CDS | 21383134 | 21383159 | 21383134 | ID=Msa0723580-mRNA-1:cds;Parent=Msa0723580-mRNA-1 |
| chr5_1 | CDS | 21382432 | 21382568 | 21382432 | ID=Msa0723580-mRNA-1:cds;Parent=Msa0723580-mRNA-1 |
| chr5_1 | CDS | 21381629 | 21381763 | 21381629 | ID=Msa0723580-mRNA-1:cds;Parent=Msa0723580-mRNA-1 |
| chr5_1 | CDS | 21381451 | 21381553 | 21381451 | ID=Msa0723580-mRNA-1:cds;Parent=Msa0723580-mRNA-1 |
| chr5_1 | CDS | 21381183 | 21381249 | 21381183 | ID=Msa0723580-mRNA-1:cds;Parent=Msa0723580-mRNA-1 |
| chr5_1 | CDS | 21380895 | 21381140 | 21380895 | ID=Msa0723580-mRNA-1:cds;Parent=Msa0723580-mRNA-1 |
| chr5_1 | CDS | 21380751 | 21380888 | 21380751 | ID=Msa0723580-mRNA-1:cds;Parent=Msa0723580-mRNA-1 |
| chr5_1 | CDS | 21380517 | 21380741 | 21380517 | ID=Msa0723580-mRNA-1:cds;Parent=Msa0723580-mRNA-1 |
| chr5_1 | CDS | 21378666 | 21378880 | 21378666 | ID=Msa0723580-mRNA-1:cds;Parent=Msa0723580-mRNA-1 |
| chr5_1 | CDS | 21377423 | 21378260 | 21377423 | ID=Msa0723580-mRNA-1:cds;Parent=Msa0723580-mRNA-1 |
| Gene Sequence |
| Protein sequence |
