AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0005260


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0005260 MtrunA17_Chr1g0159551 92.954 369 25 1 1 368 93 461 0.0 716
Msa0005260 MtrunA17_Chr1g0173121 85.598 368 53 0 1 368 97 464 0.0 665
Msa0005260 MtrunA17_Chr8g0382021 66.220 373 121 4 1 368 118 490 2.57e-179 506
Msa0005260 MtrunA17_Chr7g0232391 32.836 335 212 5 26 355 128 454 5.84e-55 187
Msa0005260 MtrunA17_Chr7g0232411 32.320 362 216 6 15 352 96 452 6.20e-54 184
Msa0005260 MtrunA17_Chr8g0336741 32.961 358 220 8 8 353 109 458 5.47e-52 179
Msa0005260 MtrunA17_Chr8g0336691 32.329 365 214 8 17 355 105 462 3.79e-51 183
Msa0005260 MtrunA17_Chr8g0336691 31.854 383 223 11 4 355 993 1368 4.48e-50 180
Msa0005260 MtrunA17_Chr8g0336691 30.791 354 202 8 19 355 574 901 6.61e-43 159
Msa0005260 MtrunA17_Chr4g0066151 36.486 296 168 8 86 363 183 476 2.49e-50 175
Msa0005260 MtrunA17_Chr7g0232331 30.504 377 226 8 15 364 96 463 2.84e-50 175
Msa0005260 MtrunA17_Chr7g0243871 37.584 298 164 8 80 363 180 469 3.91e-50 175
Msa0005260 MtrunA17_Chr7g0232341 30.728 371 233 8 15 364 96 463 9.33e-50 173
Msa0005260 MtrunA17_Chr8g0373301 37.828 267 146 6 99 355 199 455 9.54e-50 173
Msa0005260 MtrunA17_Chr4g0044511 37.546 269 147 7 109 363 240 501 1.13e-49 174
Msa0005260 MtrunA17_Chr8g0336651 31.768 362 218 7 19 355 875 1232 1.29e-49 179
Msa0005260 MtrunA17_Chr8g0336651 34.653 303 185 6 57 353 156 451 1.92e-47 172
Msa0005260 MtrunA17_Chr8g0336651 35.472 265 141 4 92 355 528 763 9.16e-44 162
Msa0005260 MtrunA17_Chr4g0066131 34.853 307 180 8 80 368 172 476 1.46e-49 173
Msa0005260 MtrunA17_Chr8g0366391 36.765 272 147 7 109 366 217 477 1.62e-49 173
Msa0005260 MtrunA17_Chr7g0265041 36.918 279 150 7 109 368 219 490 1.70e-49 173
Msa0005260 MtrunA17_Chr7g0232401 34.713 314 186 8 58 362 160 463 2.32e-49 172
Msa0005260 MtrunA17_Chr7g0275681 32.487 394 220 13 5 366 101 480 3.22e-49 172
Msa0005260 MtrunA17_Chr7g0275511 30.789 380 208 10 18 355 98 464 1.06e-48 171
Msa0005260 MtrunA17_Chr6g0464871 31.926 379 215 12 15 368 108 468 1.21e-48 170
Msa0005260 MtrunA17_Chr4g0044501 35.821 268 152 7 109 366 218 475 1.86e-48 170
Msa0005260 MtrunA17_Chr6g0449931 32.190 379 227 9 6 359 87 460 1.93e-48 170
Msa0005260 MtrunA17_Chr8g0339441 42.180 211 112 2 160 362 217 425 2.06e-48 169
Msa0005260 MtrunA17_Chr8g0336731 32.907 313 197 6 57 363 182 487 2.11e-48 170
Msa0005260 MtrunA17_Chr8g0334861 29.517 393 245 9 2 368 79 465 3.79e-48 169
Msa0005260 MtrunA17_Chr8g0339461 40.084 237 131 3 138 366 238 471 4.21e-48 169
Msa0005260 MtrunA17_Chr6g0462531 30.435 391 219 13 4 362 91 460 5.02e-48 169
Msa0005260 MtrunA17_Chr8g0339451 40.343 233 128 3 138 362 230 459 9.54e-48 168
Msa0005260 MtrunA17_Chr7g0265141 36.823 277 143 7 109 363 216 482 1.07e-47 168
Msa0005260 MtrunA17_Chr4g0066221 31.658 398 215 12 5 363 98 477 1.11e-47 168
Msa0005260 MtrunA17_Chr8g0334851 30.504 377 226 11 15 364 99 466 1.17e-47 168
Msa0005260 MtrunA17_Chr8g0339631 36.462 277 155 7 98 362 197 464 1.22e-47 168
Msa0005260 MtrunA17_Chr8g0347281 31.926 379 215 11 15 359 96 465 1.30e-47 168
Msa0005260 MtrunA17_Chr4g0044521 36.934 287 156 10 93 363 186 463 1.35e-47 167
Msa0005260 MtrunA17_Chr6g0486251 34.021 291 178 6 79 362 177 460 1.39e-47 167
Msa0005260 MtrunA17_Chr6g0486201 34.021 291 178 6 79 362 177 460 1.39e-47 167
Msa0005260 MtrunA17_Chr6g0462551 30.997 371 216 11 15 359 101 457 1.72e-47 167
Msa0005260 MtrunA17_Chr5g0440421 31.017 403 229 13 5 368 103 495 2.01e-47 167
Msa0005260 MtrunA17_Chr8g0339601 41.667 228 114 4 138 353 97 317 2.56e-47 163
Msa0005260 MtrunA17_Chr8g0374941 31.795 390 222 12 11 368 1042 1419 3.67e-47 172
Msa0005260 MtrunA17_Chr8g0374941 32.044 362 201 12 6 336 99 446 1.06e-43 162
Msa0005260 MtrunA17_Chr8g0374941 31.768 362 202 13 6 336 564 911 2.61e-40 152
Msa0005260 MtrunA17_Chr8g0374901 30.928 388 236 12 6 368 100 480 5.98e-47 166
Msa0005260 MtrunA17_Chr6g0459311 28.312 385 246 10 3 362 88 467 9.47e-47 166
Msa0005260 MtrunA17_Chr4g0066261 30.612 392 238 11 5 368 98 483 9.93e-47 166
Msa0005260 MtrunA17_Chr7g0232311 33.333 318 166 7 53 364 184 461 1.28e-46 165
Msa0005260 MtrunA17_Chr8g0347271 32.410 361 223 10 17 359 109 466 1.56e-46 165
Msa0005260 MtrunA17_Chr7g0265151 34.694 294 163 9 95 368 201 485 1.88e-46 165
Msa0005260 MtrunA17_Chr7g0265051 29.584 409 237 12 1 368 88 486 2.36e-46 165
Msa0005260 MtrunA17_Chr6g0462541 29.973 367 223 10 15 359 102 456 3.01e-46 164
Msa0005260 MtrunA17_Chr6g0462571 29.891 368 223 10 15 359 99 454 3.76e-46 164
Msa0005260 MtrunA17_Chr6g0464861 31.053 380 217 13 15 368 95 455 5.27e-46 163
Msa0005260 MtrunA17_Chr1g0153451 31.781 365 220 12 8 356 102 453 5.31e-46 163
Msa0005260 MtrunA17_Chr4g0060511 37.545 277 141 8 109 363 218 484 5.37e-46 164
Msa0005260 MtrunA17_Chr7g0243931 38.947 285 136 10 104 363 216 487 6.13e-46 164
Msa0005260 MtrunA17_Chr8g0369341 37.743 257 145 8 111 363 220 465 8.13e-46 163
Msa0005260 MtrunA17_Chr7g0243801 38.078 281 146 9 101 363 203 473 8.22e-46 163
Msa0005260 MtrunA17_Chr6g0463861 30.303 396 231 13 5 368 93 475 1.14e-45 162
Msa0005260 MtrunA17_Chr4g0066281 30.709 381 234 13 7 368 99 468 1.27e-45 162
Msa0005260 MtrunA17_Chr5g0426401 34.875 281 158 6 96 366 45 310 1.53e-45 158
Msa0005260 MtrunA17_Chr7g0243771 37.102 283 146 9 101 363 202 472 1.86e-45 162
Msa0005260 MtrunA17_Chr3g0079731 32.734 278 169 6 103 363 201 477 4.53e-45 161
Msa0005260 MtrunA17_Chr4g0014061 35.689 283 143 9 109 366 204 472 4.94e-45 161
Msa0005260 MtrunA17_Chr6g0464841 30.789 380 218 13 15 368 96 456 5.14e-45 160
Msa0005260 MtrunA17_Chr7g0243861 38.298 282 142 9 104 363 213 484 5.79e-45 161
Msa0005260 MtrunA17_Chr6g0462521 30.028 363 226 11 15 362 97 446 7.33e-45 160
Msa0005260 MtrunA17_Chr7g0265101 34.532 278 158 6 109 368 217 488 1.19e-44 160
Msa0005260 MtrunA17_Chr7g0243851 35.370 311 169 10 80 366 140 442 1.34e-44 159
Msa0005260 MtrunA17_Chr7g0235051 36.111 288 153 8 93 359 169 446 2.00e-44 159
Msa0005260 MtrunA17_Chr6g0463851 34.471 293 170 8 95 368 195 484 2.23e-44 159
Msa0005260 MtrunA17_Chr6g0464881 39.301 229 114 5 138 366 251 454 2.48e-44 159
Msa0005260 MtrunA17_Chr1g0153461 38.679 212 120 4 160 365 3 210 2.79e-44 152
Msa0005260 MtrunA17_Chr2g0294941 37.903 248 133 8 132 361 130 374 3.34e-44 156
Msa0005260 MtrunA17_Chr7g0218311 36.364 275 159 6 109 368 212 485 3.89e-44 159
Msa0005260 MtrunA17_Chr4g0011051 28.960 404 234 13 5 368 99 489 5.18e-44 159
Msa0005260 MtrunA17_Chr7g0243951 37.456 283 142 10 104 363 210 480 5.42e-44 158
Msa0005260 MtrunA17_Chr8g0361371 32.180 289 178 6 85 363 187 467 5.46e-44 158
Msa0005260 MtrunA17_Chr8g0335161 33.219 292 180 7 79 362 178 462 5.75e-44 158
Msa0005260 MtrunA17_Chr6g0454221 38.967 213 112 4 151 363 33 227 5.90e-44 154
Msa0005260 MtrunA17_Chr5g0419761 37.023 262 142 6 109 352 216 472 9.09e-44 158
Msa0005260 MtrunA17_Chr7g0243781 35.915 284 161 7 93 363 197 472 9.18e-44 157
Msa0005260 MtrunA17_Chr7g0243681 35.082 305 167 10 80 363 182 476 1.36e-43 157
Msa0005260 MtrunA17_Chr8g0335141 33.221 298 186 6 76 366 177 468 1.43e-43 157
Msa0005260 MtrunA17_Chr4g0066201 36.972 284 155 10 98 363 194 471 1.54e-43 157
Msa0005260 MtrunA17_Chr5g0401721 34.874 238 138 4 138 366 241 470 1.62e-43 157
Msa0005260 MtrunA17_Chr2g0294921 37.255 255 139 7 132 368 381 632 3.75e-43 158
Msa0005260 MtrunA17_Chr6g0453951 32.740 281 162 7 96 366 263 526 4.06e-43 157
Msa0005260 MtrunA17_Chr1g0179901 33.557 298 166 9 92 366 205 493 4.11e-43 156
Msa0005260 MtrunA17_Chr3g0078841 37.681 207 115 3 160 366 285 477 4.95e-43 155
Msa0005260 MtrunA17_Chr6g0454401 30.051 396 223 13 9 366 101 480 6.25e-43 155
Msa0005260 MtrunA17_Chr4g0044481 39.130 207 108 5 109 306 207 404 9.54e-43 154
Msa0005260 MtrunA17_Chr6g0454121 32.394 284 167 5 92 366 211 478 1.35e-42 154
Msa0005260 MtrunA17_Chr6g0454331 33.840 263 149 5 113 366 232 478 1.41e-42 154
Msa0005260 MtrunA17_Chr7g0217881 29.888 358 208 11 31 366 125 461 1.48e-42 154
Msa0005260 MtrunA17_Chr5g0419771 34.812 293 166 8 93 366 226 512 2.20e-42 154
Msa0005260 MtrunA17_Chr2g0302991 33.208 265 169 5 109 368 203 464 4.75e-42 152
Msa0005260 MtrunA17_Chr6g0454291 33.460 263 150 5 113 366 230 476 6.79e-42 152
Msa0005260 MtrunA17_Chr8g0374931 35.968 253 145 6 132 368 232 483 7.10e-42 152
Msa0005260 MtrunA17_Chr3g0118701 30.667 300 178 7 81 366 199 482 7.21e-42 152
Msa0005260 MtrunA17_Chr3g0112761 39.524 210 114 5 158 366 252 449 1.04e-41 152
Msa0005260 MtrunA17_Chr4g0053501 36.538 208 127 3 159 366 262 464 1.14e-41 152
Msa0005260 MtrunA17_Chr6g0454201 32.384 281 163 6 96 366 217 480 1.41e-41 152
Msa0005260 MtrunA17_Chr8g0355221 35.018 277 153 8 109 366 218 486 1.48e-41 152
Msa0005260 MtrunA17_Chr3g0112771 32.877 292 170 7 83 366 178 451 2.40e-41 150
Msa0005260 MtrunA17_Chr6g0454271 36.111 216 120 4 151 366 89 286 2.66e-41 146
Msa0005260 MtrunA17_Chr4g0053321 32.308 260 159 5 119 366 225 479 2.71e-41 151
Msa0005260 MtrunA17_Chr6g0452771 31.786 280 166 6 96 366 216 479 3.70e-41 150
Msa0005260 MtrunA17_Chr6g0454361 32.374 278 167 5 96 366 217 480 4.00e-41 150
Msa0005260 MtrunA17_Chr4g0066171 33.574 277 162 7 109 368 207 478 5.29e-41 150
Msa0005260 MtrunA17_Chr2g0294931 35.069 288 168 8 98 368 198 483 6.30e-41 150
Msa0005260 MtrunA17_Chr8g0336331 37.681 207 115 3 160 366 284 476 6.73e-41 150
Msa0005260 MtrunA17_Chr6g0454151 29.605 304 181 7 76 366 194 477 7.19e-41 150
Msa0005260 MtrunA17_Chr7g0243631 34.375 288 157 6 98 363 206 483 7.59e-41 150
Msa0005260 MtrunA17_Chr5g0414321 28.022 364 213 12 31 366 109 451 8.15e-41 149
Msa0005260 MtrunA17_Chr5g0428081 34.058 276 165 6 109 368 207 481 8.67e-41 149
Msa0005260 MtrunA17_Chr3g0118771 31.206 282 166 6 97 366 223 488 9.63e-41 149
Msa0005260 MtrunA17_Chr8g0350881 32.646 291 178 6 95 368 193 482 1.09e-40 149
Msa0005260 MtrunA17_Chr6g0453961 31.429 280 167 5 96 366 226 489 1.20e-40 149
Msa0005260 MtrunA17_Chr3g0118691 30.556 288 172 6 91 366 211 482 1.23e-40 149
Msa0005260 MtrunA17_Chr8g0334831 32.234 273 159 6 110 363 210 475 1.26e-40 149
Msa0005260 MtrunA17_Chr5g0420801 30.141 355 215 11 29 363 114 455 1.38e-40 149
Msa0005260 MtrunA17_Chr5g0410941 35.507 276 161 7 109 368 217 491 1.42e-40 149
Msa0005260 MtrunA17_Chr5g0414331 27.793 367 214 13 31 368 111 455 1.71e-40 148
Msa0005260 MtrunA17_Chr5g0426431 34.164 281 158 9 96 366 214 477 1.78e-40 149
Msa0005260 MtrunA17_Chr6g0454301 37.198 207 116 3 160 366 538 730 2.05e-40 151
Msa0005260 MtrunA17_Chr6g0454301 35.065 231 118 5 151 367 32 244 1.14e-34 135
Msa0005260 MtrunA17_Chr1g0207981 32.766 235 140 4 140 366 248 472 2.29e-40 148
Msa0005260 MtrunA17_Chr5g0403641 37.089 213 124 3 140 342 266 478 2.30e-40 149
Msa0005260 MtrunA17_Chr4g0042891 36.641 262 152 7 108 363 209 462 2.40e-40 148
Msa0005260 MtrunA17_Chr5g0423981 36.574 216 119 4 151 366 247 444 2.44e-40 147
Msa0005260 MtrunA17_Chr6g0454211 31.338 284 170 5 92 366 499 766 3.75e-40 151
Msa0005260 MtrunA17_Chr6g0454211 27.174 184 78 5 106 277 96 235 3.24e-15 77.4
Msa0005260 MtrunA17_Chr4g0042931 35.507 276 166 6 95 363 190 460 5.08e-40 147
Msa0005260 MtrunA17_Chr2g0302961 29.700 367 226 10 23 368 112 467 6.04e-40 147
Msa0005260 MtrunA17_Chr5g0448521 35.391 243 138 8 138 366 230 467 7.72e-40 147
Msa0005260 MtrunA17_Chr6g0454261 31.111 270 161 5 106 366 226 479 1.34e-39 146
Msa0005260 MtrunA17_Chr8g0374971 31.615 291 181 6 95 368 193 482 1.74e-39 146
Msa0005260 MtrunA17_Chr7g0243611 37.004 227 122 6 109 324 76 292 2.03e-39 142
Msa0005260 MtrunA17_Chr1g0207931 32.627 236 146 4 140 368 270 499 2.54e-39 146
Msa0005260 MtrunA17_Chr2g0307961 33.459 266 153 5 109 366 219 468 2.61e-39 145
Msa0005260 MtrunA17_Chr2g0329111 30.612 392 232 16 6 364 93 477 3.31e-39 145
Msa0005260 MtrunA17_Chr7g0243811 39.524 210 116 4 93 299 172 373 3.93e-39 143
Msa0005260 MtrunA17_Chr6g0454131 31.852 270 159 5 106 366 225 478 4.61e-39 145
Msa0005260 MtrunA17_Chr4g0050341 33.213 277 145 8 109 366 235 490 5.34e-39 145
Msa0005260 MtrunA17_Chr4g0032331 34.601 263 155 9 91 349 185 434 6.94e-39 144
Msa0005260 MtrunA17_Chr6g0464921 36.364 209 119 3 159 367 262 456 7.46e-39 144
Msa0005260 MtrunA17_Chr2g0278711 32.753 287 166 7 92 366 205 476 1.11e-38 144
Msa0005260 MtrunA17_Chr6g0454191 30.714 280 169 5 96 366 217 480 1.62e-38 143
Msa0005260 MtrunA17_Chr7g0243761 34.074 270 138 9 107 350 213 468 1.69e-38 143
Msa0005260 MtrunA17_Chr8g0370941 26.835 395 234 14 9 355 90 477 1.80e-38 144
Msa0005260 MtrunA17_Chr3g0092641 27.889 398 223 14 10 366 103 477 1.81e-38 143
Msa0005260 MtrunA17_Chr7g0243711 37.551 245 123 8 140 363 78 313 1.87e-38 140
Msa0005260 MtrunA17_Chr6g0454341 34.300 207 122 3 160 366 285 477 1.96e-38 143
Msa0005260 MtrunA17_Chr3g0098111 29.129 333 203 9 57 366 147 469 2.13e-38 143
Msa0005260 MtrunA17_Chr6g0454141 33.796 216 125 4 151 366 282 479 2.42e-38 143
Msa0005260 MtrunA17_Chr3g0118721 30.496 282 168 6 97 366 24 289 2.77e-38 139
Msa0005260 MtrunA17_Chr5g0401851 31.293 294 174 8 93 366 198 483 3.89e-38 142
Msa0005260 MtrunA17_Chr3g0118711 27.805 410 234 16 1 366 89 480 4.06e-38 142
Msa0005260 MtrunA17_Chr8g0359821 29.577 284 175 6 92 366 210 477 4.59e-38 142
Msa0005260 MtrunA17_Chr3g0118671 29.577 284 172 6 97 368 208 475 5.03e-38 142
Msa0005260 MtrunA17_Chr4g0072761 37.281 228 124 6 140 367 245 453 5.97e-38 141
Msa0005260 MtrunA17_Chr5g0412111 34.586 266 147 6 110 366 214 461 6.46e-38 141
Msa0005260 MtrunA17_Chr6g0454181 29.286 280 173 5 96 366 216 479 1.14e-37 141
Msa0005260 MtrunA17_Chr5g0442521 36.214 243 135 9 138 366 239 475 1.19e-37 141
Msa0005260 MtrunA17_Chr5g0442561 33.449 287 164 11 98 366 195 472 1.80e-37 140
Msa0005260 MtrunA17_Chr5g0431371 35.341 249 121 6 123 367 237 449 2.64e-37 139
Msa0005260 MtrunA17_Chr5g0442601 35.270 241 139 8 138 366 640 875 2.92e-37 142
Msa0005260 MtrunA17_Chr5g0442601 38.068 176 100 6 138 306 165 338 8.08e-28 115
Msa0005260 MtrunA17_Chr3g0118661 29.016 386 218 11 10 355 99 468 4.22e-37 139
Msa0005260 MtrunA17_Chr5g0432731 34.746 236 131 7 138 366 77 296 4.35e-37 135
Msa0005260 MtrunA17_Chr1g0207951 32.857 210 127 2 159 368 915 1110 4.38e-37 142
Msa0005260 MtrunA17_Chr1g0207951 29.811 265 158 6 113 368 327 572 7.88e-34 133
Msa0005260 MtrunA17_Chr1g0165701 32.852 277 156 8 109 366 218 483 4.67e-37 140
Msa0005260 MtrunA17_Chr7g0250001 34.112 214 126 4 150 363 246 444 5.07e-37 139
Msa0005260 MtrunA17_Chr5g0442541 31.802 283 174 9 98 366 188 465 6.35e-37 139
Msa0005260 MtrunA17_Chr3g0122001 36.680 259 141 6 125 366 221 473 9.80e-37 141
Msa0005260 MtrunA17_Chr3g0122001 35.938 256 146 6 125 366 701 952 2.80e-36 140
Msa0005260 MtrunA17_Chr6g0454321 36.224 196 111 3 160 355 285 466 1.15e-36 140
Msa0005260 MtrunA17_Chr5g0442491 31.126 302 188 9 80 366 178 474 1.25e-36 138
Msa0005260 MtrunA17_Chr8g0377921 35.565 239 130 4 139 363 232 460 1.38e-36 138
Msa0005260 MtrunA17_Chr8g0357361 35.922 206 110 4 109 305 61 253 1.74e-36 133
Msa0005260 MtrunA17_Chr7g0241781 31.048 248 148 6 120 366 200 425 2.44e-36 136
Msa0005260 MtrunA17_Chr7g0265111 35.060 251 138 5 136 366 270 515 3.31e-36 138
Msa0005260 MtrunA17_Chr8g0377941 35.319 235 135 5 134 366 242 461 3.77e-36 137
Msa0005260 MtrunA17_Chr8g0365811 33.816 207 133 3 161 366 754 957 6.06e-36 139
Msa0005260 MtrunA17_Chr8g0365811 33.333 207 134 3 161 366 272 475 4.23e-32 127
Msa0005260 MtrunA17_Chr5g0431361 31.773 299 179 8 76 367 174 454 6.54e-36 135
Msa0005260 MtrunA17_Chr7g0241801 29.839 248 151 6 120 366 200 425 7.79e-36 135
Msa0005260 MtrunA17_Chr8g0361411 31.203 266 161 4 111 367 202 454 2.37e-35 134
Msa0005260 MtrunA17_Chr5g0431421 36.017 236 127 7 138 366 230 448 3.92e-35 134
Msa0005260 MtrunA17_Chr7g0249961 33.019 212 127 3 155 366 63 259 9.74e-35 129
Msa0005260 MtrunA17_Chr1g0207861 28.097 331 209 9 57 366 146 468 9.85e-35 133
Msa0005260 MtrunA17_Chr5g0431441 27.344 384 230 12 11 366 103 465 1.48e-34 132
Msa0005260 MtrunA17_Chr5g0442511 31.535 241 148 7 138 366 258 493 1.52e-34 132
Msa0005260 MtrunA17_Chr6g0454351 37.097 186 103 3 181 366 293 464 1.61e-34 132
Msa0005260 MtrunA17_Chr3g0121991 34.766 256 149 6 125 366 294 545 1.74e-34 133
Msa0005260 MtrunA17_Chr7g0218821 30.147 272 162 7 95 363 201 447 1.75e-34 132
Msa0005260 MtrunA17_Chr5g0393591 25.507 345 218 10 31 368 125 437 3.14e-34 131
Msa0005260 MtrunA17_Chr7g0243911 38.342 193 98 6 161 341 22 205 5.61e-34 125
Msa0005260 MtrunA17_Chr5g0442581 33.878 245 139 9 138 366 239 476 6.17e-34 131
Msa0005260 MtrunA17_Chr7g0218791 32.197 264 148 7 95 353 197 434 1.05e-33 129
Msa0005260 MtrunA17_Chr5g0409591 37.569 181 99 3 161 333 275 449 1.06e-33 130
Msa0005260 MtrunA17_Chr1g0207831 26.042 384 240 13 12 368 99 465 1.48e-33 129
Msa0005260 MtrunA17_Chr7g0249981 33.180 217 130 3 150 366 265 466 1.60e-33 130
Msa0005260 MtrunA17_Chr1g0161351 27.844 334 210 9 57 368 175 499 1.68e-33 130
Msa0005260 MtrunA17_Chr5g0412101 36.967 211 111 5 159 366 279 470 2.02e-33 129
Msa0005260 MtrunA17_Chr6g0454171 29.433 282 158 6 96 366 58 309 2.58e-33 126
Msa0005260 MtrunA17_Chr1g0207971 29.150 247 147 5 134 368 225 455 2.71e-33 129
Msa0005260 MtrunA17_Chr3g0106251 32.906 234 135 5 138 366 77 293 2.86e-33 125
Msa0005260 MtrunA17_Chr5g0429681 38.191 199 106 8 138 327 275 465 2.88e-33 129
Msa0005260 MtrunA17_Chr3g0079711 35.326 184 111 3 187 363 3 185 3.92e-33 122
Msa0005260 MtrunA17_Chr6g0463891 30.797 276 164 7 109 366 218 484 4.13e-33 129
Msa0005260 MtrunA17_Chr8g0355011 33.190 232 136 4 135 366 149 361 4.78e-33 126
Msa0005260 MtrunA17_Chr7g0218831 32.524 206 123 3 159 364 248 437 4.78e-33 127
Msa0005260 MtrunA17_Chr5g0416741 30.450 289 174 7 93 363 201 480 5.31e-33 128
Msa0005260 MtrunA17_Chr6g0454371 34.783 184 106 3 183 366 1 170 5.41e-33 121
Msa0005260 MtrunA17_Chr8g0380531 27.933 358 226 10 31 368 114 459 5.48e-33 128
Msa0005260 MtrunA17_Chr7g0232351 31.164 292 172 8 10 277 91 377 1.05e-32 125
Msa0005260 MtrunA17_Chr5g0429711 32.353 238 136 9 138 367 242 462 1.42e-32 127
Msa0005260 MtrunA17_Chr5g0431401 33.755 237 133 7 138 367 230 449 2.47e-32 126
Msa0005260 MtrunA17_Chr7g0218841 32.857 210 117 4 159 364 249 438 2.75e-32 125
Msa0005260 MtrunA17_Chr7g0249931 29.866 298 170 12 83 363 205 480 3.83e-32 126
Msa0005260 MtrunA17_Chr3g0106231 32.870 216 126 4 153 366 253 451 2.84e-31 123
Msa0005260 MtrunA17_Chr7g0218811 27.273 275 174 6 91 363 196 446 2.97e-31 123
Msa0005260 MtrunA17_Chr5g0412131 35.071 211 115 5 159 366 278 469 2.16e-30 120
Msa0005260 MtrunA17_Chr8g0336251 33.203 256 138 8 120 364 223 456 4.05e-30 120
Msa0005260 MtrunA17_Chr8g0336321 33.203 256 138 8 120 364 223 456 4.22e-30 120
Msa0005260 MtrunA17_Chr5g0448551 37.363 182 93 5 159 331 258 427 2.57e-29 117
Msa0005260 MtrunA17_Chr3g0118751 27.758 281 148 6 97 366 208 444 5.05e-29 117
Msa0005260 MtrunA17_Chr5g0427571 31.923 260 140 9 120 364 53 290 1.59e-28 112
Msa0005260 MtrunA17_Chr6g0482061 33.182 220 134 6 139 353 255 466 2.68e-28 115
Msa0005260 MtrunA17_Chr5g0416821 28.939 311 173 11 71 363 190 470 3.41e-28 115
Msa0005260 MtrunA17_Chr5g0431431 34.694 196 102 5 138 331 181 352 1.21e-27 111
Msa0005260 MtrunA17_Chr4g0072771 31.579 228 137 5 140 367 258 466 1.42e-27 113
Msa0005260 MtrunA17_Chr6g0454251 27.541 305 172 9 11 277 100 393 2.46e-27 111
Msa0005260 MtrunA17_Chr4g0066141 41.718 163 85 4 211 363 186 348 3.31e-27 110
Msa0005260 MtrunA17_Chr2g0278721 28.846 260 159 8 113 366 734 973 1.14e-26 111
Msa0005260 MtrunA17_Chr2g0278721 28.409 264 161 8 113 368 221 464 1.43e-24 105
Msa0005260 MtrunA17_Chr8g0336261 40.769 130 69 2 183 312 1 122 1.32e-26 103
Msa0005260 MtrunA17_Chr8g0367221 32.787 183 116 3 162 344 1547 1722 1.36e-25 108
Msa0005260 MtrunA17_Chr8g0367221 32.105 190 108 4 162 344 270 445 1.54e-25 108
Msa0005260 MtrunA17_Chr8g0367221 31.579 190 109 4 162 344 1057 1232 1.01e-24 106
Msa0005260 MtrunA17_Chr7g0231631 29.889 271 149 9 111 363 9 256 1.76e-25 103
Msa0005260 MtrunA17_Chr3g0092031 38.710 124 67 1 163 286 6 120 1.84e-25 102
Msa0005260 MtrunA17_Chr2g0302851 31.915 188 111 4 163 347 270 443 2.92e-25 106
Msa0005260 MtrunA17_Chr4g0069611 33.149 181 101 4 113 286 216 383 3.04e-25 106
Msa0005260 MtrunA17_Chr8g0337381 42.857 119 62 3 238 355 1 114 5.88e-25 98.6
Msa0005260 MtrunA17_Chr4g0039881 34.857 175 100 4 116 286 196 360 9.99e-25 104
Msa0005260 MtrunA17_Chr6g0464091 40.000 125 66 1 162 286 278 393 1.07e-24 104
Msa0005260 MtrunA17_Chr2g0278741 28.137 263 157 8 116 368 306 546 1.07e-24 105
Msa0005260 MtrunA17_Chr6g0466841 32.044 181 103 4 113 286 219 386 1.36e-24 104
Msa0005260 MtrunA17_Chr6g0466831 33.149 181 101 5 113 286 219 386 1.57e-24 104
Msa0005260 MtrunA17_Chr1g0196851 32.900 231 143 7 113 340 252 473 1.38e-22 99.0
Msa0005260 MtrunA17_Chr4g0040711 32.461 191 120 3 114 304 215 396 1.23e-21 95.9
Msa0005260 MtrunA17_Chr6g0454231 37.500 128 73 2 240 366 97 218 1.40e-21 95.9
Msa0005260 MtrunA17_Chr4g0029151 38.462 143 85 2 162 304 264 403 4.59e-21 94.4
Msa0005260 MtrunA17_Chr4g0029131 31.628 215 128 6 94 303 194 394 4.54e-20 92.0
Msa0005260 MtrunA17_Chr4g0040691 30.890 191 123 3 114 304 215 396 5.70e-20 90.9
Msa0005260 MtrunA17_Chr7g0243731 52.239 67 32 0 237 303 7 73 9.33e-20 82.8
Msa0005260 MtrunA17_Chr2g0283041 28.636 220 144 5 113 332 213 419 2.45e-19 89.0
Msa0005260 MtrunA17_Chr1g0207881 31.818 132 89 1 237 368 256 386 4.15e-18 85.1
Msa0005260 MtrunA17_Chr2g0319751 26.531 245 165 6 107 348 685 917 7.20e-16 79.3
Msa0005260 MtrunA17_Chr2g0319751 25.103 243 143 6 109 348 210 416 7.48e-13 70.1
Msa0005260 MtrunA17_Chr2g0319791 27.074 229 152 6 120 345 221 437 6.95e-15 75.9
Msa0005260 MtrunA17_Chr1g0159561 91.429 35 3 0 334 368 12 46 9.42e-15 68.2
Msa0005260 MtrunA17_Chr2g0319731 28.571 231 150 6 118 345 236 454 2.42e-14 73.9
Msa0005260 MtrunA17_Chr2g0319761 25.532 235 160 6 114 345 215 437 5.14e-14 73.2
Msa0005260 MtrunA17_Chr2g0319801 28.085 235 154 6 114 345 215 437 5.50e-14 72.8
Msa0005260 MtrunA17_Chr8g0334841 36.449 107 61 3 108 211 36 138 2.67e-12 64.7
Msa0005260 MtrunA17_Chr7g0243721 35.398 113 63 3 109 212 30 141 4.15e-12 63.5
Msa0005260 MtrunA17_Chr6g0454391 36.458 96 49 2 253 342 11 100 4.50e-12 62.8
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0005260 AT4G34131.1 37.175 269 150 6 109 367 221 480 7.14e-51 177
Msa0005260 AT2G15490.3 35.556 270 154 6 109 367 218 478 9.18e-50 174
Msa0005260 AT2G15490.1 35.273 275 151 6 109 367 218 481 4.17e-49 172
Msa0005260 AT4G34138.1 34.965 286 154 6 98 367 210 479 7.54e-49 172
Msa0005260 AT4G01070.1 37.008 254 149 5 109 355 207 456 2.84e-48 170
Msa0005260 AT1G73880.1 33.977 259 157 4 111 366 219 466 4.91e-48 169
Msa0005260 AT3G53160.1 36.559 279 145 8 109 366 215 482 1.09e-47 169
Msa0005260 AT2G15480.1 33.829 269 160 5 109 367 221 481 1.63e-47 168
Msa0005260 AT2G36780.1 34.028 288 165 7 99 368 210 490 2.56e-46 165
Msa0005260 AT2G15480.2 33.333 279 158 7 109 367 221 491 1.01e-45 163
Msa0005260 AT4G34135.1 35.897 273 149 6 109 367 222 482 4.67e-45 161
Msa0005260 AT5G26310.1 29.521 376 226 10 18 358 87 458 5.21e-45 161
Msa0005260 AT3G16520.3 29.917 361 225 9 21 363 106 456 6.59e-45 160
Msa0005260 AT2G36770.1 28.928 401 243 10 1 368 99 490 9.23e-45 161
Msa0005260 AT3G50740.1 32.759 348 193 12 43 355 121 462 9.47e-45 160
Msa0005260 AT2G36760.1 34.164 281 163 5 91 355 203 477 1.21e-44 160
Msa0005260 AT4G36770.1 40.455 220 115 5 140 350 235 447 8.86e-44 157
Msa0005260 AT3G16520.2 30.372 349 215 9 21 351 106 444 1.14e-43 157
Msa0005260 AT3G16520.1 30.372 349 215 9 21 351 106 444 1.29e-43 157
Msa0005260 AT2G31750.1 35.409 257 136 6 128 368 214 456 1.52e-43 157
Msa0005260 AT3G46670.1 36.471 255 147 5 113 366 208 448 2.10e-43 156
Msa0005260 AT2G31750.2 35.409 257 136 6 128 368 214 456 3.35e-43 156
Msa0005260 AT5G66690.1 29.412 374 224 10 18 355 87 456 4.51e-43 156
Msa0005260 AT3G11340.1 38.846 260 143 8 109 366 199 444 6.97e-43 155
Msa0005260 AT2G36800.1 28.392 398 246 10 1 366 97 487 9.32e-43 155
Msa0005260 AT3G46660.1 39.485 233 124 6 138 368 239 456 1.80e-42 154
Msa0005260 AT2G29730.1 32.824 262 161 5 109 366 212 462 4.04e-42 153
Msa0005260 AT1G10400.1 35.632 261 145 7 109 363 216 459 5.01e-42 153
Msa0005260 AT5G03490.1 29.016 386 213 12 2 358 100 453 5.90e-42 153
Msa0005260 AT2G23250.1 34.247 292 168 7 83 366 160 435 1.34e-41 151
Msa0005260 AT1G05680.1 39.512 205 110 3 160 364 260 450 1.46e-41 151
Msa0005260 AT5G14860.1 33.813 278 164 7 95 368 216 477 2.06e-41 152
Msa0005260 AT2G18570.1 30.294 340 209 10 27 342 107 442 3.94e-41 150
Msa0005260 AT2G36750.1 32.292 288 173 7 97 368 204 485 4.87e-41 150
Msa0005260 AT1G05675.1 39.024 205 111 3 160 364 260 450 1.81e-40 148
Msa0005260 AT5G12890.1 30.928 388 229 15 5 363 101 478 2.02e-40 149
Msa0005260 AT2G43840.2 28.371 356 218 9 31 366 108 446 2.24e-40 148
Msa0005260 AT2G36790.1 33.696 276 161 7 109 368 220 489 2.49e-40 149
Msa0005260 AT2G43840.1 28.371 356 218 9 31 366 108 446 3.55e-40 147
Msa0005260 AT1G07250.1 29.526 359 220 11 31 366 124 472 3.80e-40 148
Msa0005260 AT2G30140.2 29.365 378 227 10 10 367 94 451 4.83e-40 147
Msa0005260 AT2G16890.2 31.047 277 174 6 96 368 206 469 5.41e-40 147
Msa0005260 AT1G01420.1 33.099 284 144 9 88 362 208 454 5.71e-40 147
Msa0005260 AT2G30140.1 29.288 379 227 10 10 367 94 452 6.15e-40 147
Msa0005260 AT5G05870.1 37.069 232 132 5 138 367 236 455 6.28e-40 147
Msa0005260 AT1G01420.2 33.099 284 144 9 88 362 211 457 6.82e-40 147
Msa0005260 AT5G05860.1 35.540 287 167 7 83 366 176 447 8.98e-40 146
Msa0005260 AT3G21800.1 29.582 311 191 8 81 368 172 477 9.28e-40 147
Msa0005260 AT3G46680.1 34.630 257 151 6 109 363 205 446 1.27e-39 146
Msa0005260 AT2G31790.1 38.095 210 116 3 159 367 261 457 1.66e-39 146
Msa0005260 AT1G01390.1 34.646 254 155 5 109 355 207 456 2.32e-39 146
Msa0005260 AT1G01390.2 34.646 254 155 5 109 355 224 473 2.49e-39 146
Msa0005260 AT2G18560.1 33.456 272 166 7 93 355 100 365 2.73e-39 144
Msa0005260 AT3G21760.1 32.526 289 181 7 91 368 197 482 2.97e-39 145
Msa0005260 AT5G59590.1 35.271 258 148 6 109 363 205 446 4.19e-39 145
Msa0005260 AT3G21790.1 31.502 273 166 8 110 368 215 480 4.28e-39 145
Msa0005260 AT2G29740.1 29.661 354 218 11 31 363 128 471 4.42e-39 145
Msa0005260 AT1G51210.1 29.248 359 201 13 3 338 101 429 5.53e-39 144
Msa0005260 AT2G23260.1 34.387 253 143 7 126 367 214 454 1.02e-38 144
Msa0005260 AT3G55700.1 30.514 331 185 11 57 366 144 450 1.37e-38 144
Msa0005260 AT3G21750.1 33.058 242 142 6 138 366 234 468 1.43e-38 144
Msa0005260 AT5G59580.1 36.122 263 139 8 109 363 203 444 1.99e-38 143
Msa0005260 AT3G46690.1 38.362 232 127 5 140 367 231 450 2.68e-38 142
Msa0005260 AT4G15490.1 31.724 290 168 10 95 368 198 473 1.02e-37 141
Msa0005260 AT1G05560.1 37.021 235 135 6 139 366 223 451 1.14e-37 141
Msa0005260 AT2G29710.1 33.333 261 156 7 109 363 211 459 1.25e-37 141
Msa0005260 AT3G46700.1 35.115 262 150 6 109 366 199 444 1.27e-37 140
Msa0005260 AT2G30150.1 33.906 233 136 3 138 368 222 438 1.80e-37 140
Msa0005260 AT1G05560.2 37.021 235 135 6 139 366 273 501 2.08e-37 141
Msa0005260 AT2G30150.2 33.906 233 136 3 138 368 238 454 3.12e-37 140
Msa0005260 AT2G29750.1 31.939 263 163 7 109 366 222 473 3.30e-37 140
Msa0005260 AT3G53150.1 37.500 240 129 5 111 335 231 464 3.48e-37 140
Msa0005260 AT3G46720.1 36.957 230 123 5 140 366 230 440 3.77e-37 139
Msa0005260 AT2G16890.3 34.597 211 123 4 96 304 206 403 5.18e-37 139
Msa0005260 AT2G43820.1 28.933 356 216 9 31 366 108 446 5.79e-37 139
Msa0005260 AT1G07260.1 31.955 266 156 10 109 363 217 468 9.00e-37 139
Msa0005260 AT1G05530.1 34.323 303 179 11 76 366 160 454 1.14e-36 138
Msa0005260 AT4G15260.1 28.772 285 188 6 92 366 75 354 1.38e-36 136
Msa0005260 AT3G46650.1 36.471 255 139 7 113 362 192 428 1.41e-36 137
Msa0005260 AT5G38040.1 34.783 253 148 7 113 363 209 446 2.10e-36 137
Msa0005260 AT5G38010.1 34.363 259 149 7 109 363 209 450 2.65e-36 137
Msa0005260 AT4G15480.1 35.814 215 127 5 155 366 272 478 4.77e-36 137
Msa0005260 AT1G07240.1 33.086 269 158 10 109 366 218 475 5.78e-36 137
Msa0005260 AT4G15280.1 32.218 239 147 6 138 366 240 473 5.92e-36 137
Msa0005260 AT4G15280.2 32.218 239 147 6 138 366 272 505 7.49e-36 137
Msa0005260 AT3G21560.1 32.864 213 133 2 154 366 270 472 1.21e-35 136
Msa0005260 AT2G26480.1 35.338 266 146 8 109 366 198 445 2.17e-35 135
Msa0005260 AT1G22340.1 28.720 289 173 7 93 366 211 481 3.67e-35 134
Msa0005260 AT4G15500.1 34.483 232 131 6 140 363 241 459 9.63e-35 133
Msa0005260 AT1G24100.1 35.407 209 122 4 160 368 265 460 1.11e-34 133
Msa0005260 AT1G22400.1 29.893 281 169 7 96 364 215 479 1.97e-34 132
Msa0005260 AT1G78270.1 30.282 284 163 6 84 345 188 458 4.88e-34 131
Msa0005260 AT1G22380.1 35.263 190 109 3 155 344 282 457 1.84e-33 130
Msa0005260 AT5G17050.1 33.484 221 130 3 135 355 242 445 2.64e-33 129
Msa0005260 AT5G05880.1 35.407 209 123 4 159 367 253 449 4.85e-33 128
Msa0005260 AT3G21780.1 29.617 287 186 8 92 367 188 469 6.25e-33 128
Msa0005260 AT4G15550.1 33.333 237 152 5 129 363 238 470 1.58e-32 127
Msa0005260 AT5G05900.1 36.493 211 111 4 159 367 259 448 4.38e-32 125
Msa0005260 AT1G22360.1 27.562 283 177 7 96 366 211 477 5.99e-32 125
Msa0005260 AT5G05890.1 34.112 214 119 5 159 367 257 453 9.96e-32 124
Msa0005260 AT1G06000.1 26.630 368 235 9 5 366 95 433 1.26e-31 124
Msa0005260 AT5G65550.1 31.050 219 139 4 120 338 228 434 1.61e-31 124
Msa0005260 AT2G36970.1 32.766 235 135 5 138 366 253 470 1.51e-30 122
Msa0005260 AT3G55710.1 28.788 330 194 10 59 366 144 454 1.82e-30 121
Msa0005260 AT5G49690.1 36.979 192 101 7 162 351 266 439 8.17e-30 119
Msa0005260 AT5G17030.1 31.839 223 133 4 135 355 239 444 6.23e-29 117
Msa0005260 AT1G30530.1 31.855 248 142 7 66 305 166 394 1.54e-28 115
Msa0005260 AT5G17040.2 29.545 264 156 6 99 355 86 326 1.70e-28 114
Msa0005260 AT5G17040.1 29.545 264 156 6 99 355 188 428 2.03e-28 115
Msa0005260 AT3G02100.1 35.885 209 111 6 158 366 274 459 4.40e-28 114
Msa0005260 AT1G22360.2 26.502 283 168 8 96 366 211 465 5.40e-28 114
Msa0005260 AT1G22370.1 37.584 149 71 3 160 301 112 245 6.52e-28 111
Msa0005260 AT2G28080.1 30.544 239 150 6 128 363 243 468 8.34e-28 114
Msa0005260 AT1G22370.2 38.462 143 78 3 160 301 282 415 4.60e-27 112
Msa0005260 AT4G14090.1 31.538 260 148 10 113 363 214 452 1.30e-26 110
Msa0005260 AT1G64910.1 30.769 247 144 8 91 324 179 411 2.83e-25 106
Msa0005260 AT3G22250.1 33.690 187 102 6 159 335 272 446 9.73e-25 105
Msa0005260 AT4G27560.1 32.127 221 128 5 116 324 207 417 1.55e-24 104
Msa0005260 AT2G22590.1 31.140 228 146 6 139 366 250 466 2.66e-24 103
Msa0005260 AT4G27570.1 30.435 253 154 7 115 363 206 440 3.23e-24 103
Msa0005260 AT5G37950.2 35.393 178 98 7 106 277 170 336 2.81e-22 96.7
Msa0005260 AT5G37950.1 35.393 178 98 7 106 277 176 342 3.35e-22 96.7
Msa0005260 AT5G53990.1 29.412 221 134 5 116 324 201 411 1.10e-21 96.3
Msa0005260 AT3G29630.1 30.631 222 133 5 116 324 201 414 1.08e-20 93.6
Msa0005260 AT5G54060.1 28.205 273 171 8 95 362 206 458 2.68e-20 92.4
Msa0005260 AT5G54010.1 28.959 221 135 5 116 324 207 417 2.30e-19 89.7
Msa0005260 AT1G50580.1 30.876 217 130 5 120 324 204 412 2.97e-19 89.4
Msa0005260 AT3G29630.2 31.053 190 112 3 148 324 205 388 7.88e-19 87.8
Msa0005260 AT1G64920.1 28.400 250 150 8 91 324 179 415 1.99e-18 86.7
Msa0005260 AT2G22930.1 25.106 235 162 6 115 347 200 422 1.31e-14 75.1
Msa0005260 AT4G09500.2 27.149 221 139 6 115 323 200 410 7.59e-14 72.8
Msa0005260 AT4G34135.2 35.849 106 60 2 109 207 222 326 3.90e-13 70.1
Msa0005260 AT4G09500.1 29.518 166 99 4 170 323 226 385 6.52e-13 70.1
Msa0005260 AT4G01070.2 32.639 144 86 5 109 245 207 346 1.28e-12 68.6

Find 93 sgRNAs with CRISPR-Local

Find 206 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TATCATTGATGTTCCTTCTA+TGG 0.222334 1_1:+7717158 Msa0005260:CDS
GTTATCAAAACACAGTTTCT+TGG 0.289861 1_1:-7717777 None:intergenic
AAAGCAAGATAAAGTTCATT+TGG 0.294283 1_1:+7717508 Msa0005260:CDS
TTGGTTACTGCTTCAGATAT+TGG 0.308225 1_1:+7717852 Msa0005260:CDS
ATATTGGGAATGTTGTTAAA+AGG 0.310146 1_1:+7717868 Msa0005260:CDS
TGGGCTTTGTTGTGAGGGAT+TGG 0.311800 1_1:+7717625 Msa0005260:CDS
CTCTTCCATTTGGGAGAGAA+TGG 0.326959 1_1:+7717110 Msa0005260:CDS
TGGTTACTGCTTCAGATATT+GGG 0.331872 1_1:+7717853 Msa0005260:CDS
CAAATTGAACAGATTGCAAC+TGG 0.342648 1_1:+7717477 Msa0005260:CDS
TTGGGCTAAAAGACATGAAT+TGG 0.369394 1_1:+7717833 Msa0005260:CDS
GGGCTTTGTTGTGAGGGATT+GGG 0.369486 1_1:+7717626 Msa0005260:CDS
CCCCATTGAAATGCTCTCTA+AGG 0.373079 1_1:-7717718 None:intergenic
TTCTTCCCCTCAATGCTTAG+AGG 0.377825 1_1:-7717351 None:intergenic
GTGAAGCATCCTTCCATAGA+AGG 0.378318 1_1:-7717171 None:intergenic
TCAGTTATATATGTATCATT+TGG 0.379027 1_1:+7717429 Msa0005260:CDS
TTCTCTATCAACTCCAAGTA+AGG 0.388992 1_1:-7717285 None:intergenic
CTCAATGCTTAGAGGGTTGA+AGG 0.389883 1_1:-7717343 None:intergenic
CGATTTCATGATGGCACAAA+TGG 0.392572 1_1:+7717206 Msa0005260:CDS
CCATCATGAAATCGACGAAT+TGG 0.396737 1_1:-7717197 None:intergenic
TGGAGTTTCTCGTATGGAAA+TGG 0.396766 1_1:+7717974 Msa0005260:CDS
ATGATATGCCAGCTTTCAAT+TGG 0.402912 1_1:-7717141 None:intergenic
ATAACACAAGTGTTAAAGAT+TGG 0.405924 1_1:+7717795 Msa0005260:CDS
AAGCAAGATAAAGTTCATTT+GGG 0.407817 1_1:+7717509 Msa0005260:CDS
GAATGTTGTTAAAAGGTTGA+TGG 0.417402 1_1:+7717875 Msa0005260:CDS
AAAAGAGGTGAACTTTCAAA+AGG 0.418258 1_1:+7717579 Msa0005260:CDS
GGGTTTGAAGAGAGAGTTGA+AGG 0.426802 1_1:+7717600 Msa0005260:CDS
CTCATAAACCCTCCCGTTGA+AGG 0.430937 1_1:-7717675 None:intergenic
ACAAGTGTTAAAGATTGGTT+TGG 0.437278 1_1:+7717800 Msa0005260:CDS
TACCTTAGAGAGCATTTCAA+TGG 0.441839 1_1:+7717716 Msa0005260:CDS
ATTCTTAGCCACCCTTCAAC+GGG 0.442894 1_1:+7717663 Msa0005260:CDS
TGCATAGGCCATACTGCTAT+TGG 0.449556 1_1:-7717744 None:intergenic
GAAGAGAGAGTTGAAGGAAT+GGG 0.453238 1_1:+7717606 Msa0005260:CDS
TTGGTTTGGTTGTGAAGGAT+TGG 0.457697 1_1:+7717814 Msa0005260:CDS
ACCTTAGAGAGCATTTCAAT+GGG 0.461716 1_1:+7717717 Msa0005260:CDS
TGGTTTGGTTGTGAAGGATT+GGG 0.465003 1_1:+7717815 Msa0005260:CDS
TTCAATTTGATCCTCTGTCA+AGG 0.466306 1_1:-7717463 None:intergenic
AAATGTTGTTGGTACGTCAA+TGG 0.466486 1_1:+7717944 Msa0005260:CDS
TCTTCCATTTGGGAGAGAAT+GGG 0.477851 1_1:+7717111 Msa0005260:CDS
TCACTTGCAATAAGAAGCAC+TGG 0.478475 1_1:+7717310 Msa0005260:CDS
GGTGGCTAAGAATTTCCAAC+TGG 0.478832 1_1:-7717653 None:intergenic
AATTCTGTGAATTCAGTAAT+GGG 0.494323 1_1:+7717229 Msa0005260:CDS
TCTTCCCCTCAATGCTTAGA+GGG 0.494369 1_1:-7717350 None:intergenic
TGAAGAGAGAGTTGAAGGAA+TGG 0.495173 1_1:+7717605 Msa0005260:CDS
TCAAAACACAGTTTCTTGGC+TGG 0.496189 1_1:-7717773 None:intergenic
CAATAAGAAGCACTGGGCAG+TGG 0.496638 1_1:+7717317 Msa0005260:CDS
AGTAATCGAAGGTCCTTACT+TGG 0.505818 1_1:+7717272 Msa0005260:CDS
AATTCTTAGCCACCCTTCAA+CGG 0.508963 1_1:+7717662 Msa0005260:CDS
TTCAACCCTCTAAGCATTGA+GGG 0.512374 1_1:+7717345 Msa0005260:CDS
AATAAGAAGCACTGGGCAGT+GGG 0.521320 1_1:+7717318 Msa0005260:CDS
GTGTTGAGAGATGCTGATAA+AGG 0.522956 1_1:+7717531 Msa0005260:CDS
AGGAATGGGCTTTGTTGTGA+GGG 0.524244 1_1:+7717620 Msa0005260:CDS
GAGGGATTGGGCACCCCAGT+TGG 0.524518 1_1:+7717638 Msa0005260:CDS
GATAAACATGAAGGGAAAAG+AGG 0.525639 1_1:+7717564 Msa0005260:CDS
TAAAAGGTTGATGGAGACAA+TGG 0.527148 1_1:+7717884 Msa0005260:CDS
GACATCTTTGATAAACATGA+AGG 0.528778 1_1:+7717555 Msa0005260:CDS
AAAGAGGTGAACTTTCAAAA+GGG 0.535280 1_1:+7717580 Msa0005260:CDS
CCAATTCGTCGATTTCATGA+TGG 0.537506 1_1:+7717197 Msa0005260:CDS
CTTCAACCCTCTAAGCATTG+AGG 0.541335 1_1:+7717344 Msa0005260:CDS
ATTGATGTTCCTTCTATGGA+AGG 0.543815 1_1:+7717162 Msa0005260:CDS
GAATTCTGTGAATTCAGTAA+TGG 0.544512 1_1:+7717228 Msa0005260:CDS
TGAAGGTGGAGTTTCTCGTA+TGG 0.545785 1_1:+7717968 Msa0005260:CDS
GGTTTATGAGTCATTGTGGA+TGG 0.552414 1_1:+7717688 Msa0005260:CDS
AAGGAATGGGCTTTGTTGTG+AGG 0.555877 1_1:+7717619 Msa0005260:CDS
GATTGCATGAGTTCCGCCAC+AGG 0.565307 1_1:-7716958 None:intergenic
TCATAAACCCTCCCGTTGAA+GGG 0.569046 1_1:-7717674 None:intergenic
AAAGATTGGTTTGGTTGTGA+AGG 0.569411 1_1:+7717809 Msa0005260:CDS
TGAGGGGAAGAAAGATTCAA+AGG 0.569825 1_1:+7717362 Msa0005260:CDS
ACATCTTCGCGAGCCTGTGG+CGG 0.571072 1_1:+7716945 Msa0005260:CDS
TGTAAAGAAGCTTCAAAAGA+CGG 0.575947 1_1:-7716925 None:intergenic
CTTGGCTGGTCAGAATGCAT+AGG 0.594768 1_1:-7717759 None:intergenic
GAGGGGAAGAAAGATTCAAA+GGG 0.594780 1_1:+7717363 Msa0005260:CDS
TTTACATCTTCGCGAGCCTG+TGG 0.594936 1_1:+7716942 Msa0005260:CDS
GTAGACACTCATGCATGGAA+TGG 0.601343 1_1:+7717385 Msa0005260:CDS
TTAGCCACCCTTCAACGGGA+GGG 0.601640 1_1:+7717667 Msa0005260:CDS
AAAGGGTAGACACTCATGCA+TGG 0.602471 1_1:+7717380 Msa0005260:CDS
CTTAGCCACCCTTCAACGGG+AGG 0.612754 1_1:+7717666 Msa0005260:CDS
CTTAGAGAGCATTTCAATGG+GGG 0.614405 1_1:+7717719 Msa0005260:CDS
GGAGGGTTTATGAGTCATTG+TGG 0.620673 1_1:+7717684 Msa0005260:CDS
TCAATGCTTAGAGGGTTGAA+GGG 0.622576 1_1:-7717342 None:intergenic
GTTGGTACGTCAATGGATGA+AGG 0.624718 1_1:+7717951 Msa0005260:CDS
ACATCTTTGATAAACATGAA+GGG 0.638726 1_1:+7717556 Msa0005260:CDS
AGGTTGATGGAGACAATGGA+AGG 0.642690 1_1:+7717888 Msa0005260:CDS
CACTTGCAATAAGAAGCACT+GGG 0.643775 1_1:+7717311 Msa0005260:CDS
TAAACCCTCCCGTTGAAGGG+TGG 0.644274 1_1:-7717671 None:intergenic
GTGGCTAAGAATTTCCAACT+GGG 0.658230 1_1:-7717652 None:intergenic
AATACAAGCAGAGTAATCGA+AGG 0.676316 1_1:+7717261 Msa0005260:CDS
TCAACCCTCTAAGCATTGAG+GGG 0.679812 1_1:+7717346 Msa0005260:CDS
AAATTGAACAGATTGCAACT+GGG 0.682471 1_1:+7717478 Msa0005260:CDS
AACAACAACAACCTTGACAG+AGG 0.682669 1_1:+7717452 Msa0005260:CDS
CCTTAGAGAGCATTTCAATG+GGG 0.702720 1_1:+7717718 Msa0005260:CDS
GGTACGTCAATGGATGAAGG+TGG 0.707930 1_1:+7717954 Msa0005260:CDS
ATAAGAAGCACTGGGCAGTG+GGG 0.711121 1_1:+7717319 Msa0005260:CDS
TGGCTAAGAATTTCCAACTG+GGG 0.712555 1_1:-7717651 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! ATAAAACTTAAAAATGTTGT+TGG + chr1_1:7717933-7717952 Msa0005260:CDS 15.0%
!! ATAAAACTTAAAAATGTTGT+TGG + chr1_1:7717933-7717952 Msa0005260:CDS 15.0%
!! TCAGTTATATATGTATCATT+TGG + chr1_1:7717429-7717448 Msa0005260:CDS 20.0%
!! TCAGTTATATATGTATCATT+TGG + chr1_1:7717429-7717448 Msa0005260:CDS 20.0%
!! ACTTTCATCTGTTTTCAAAA+GGG + chr1_1:7716981-7717000 Msa0005260:CDS 25.0%
!! TGTAATTCATGACACTTTTA+TGG + chr1_1:7717008-7717027 Msa0005260:CDS 25.0%
! AATTCTGTGAATTCAGTAAT+GGG + chr1_1:7717229-7717248 Msa0005260:CDS 25.0%
! AAAGCAAGATAAAGTTCATT+TGG + chr1_1:7717508-7717527 Msa0005260:CDS 25.0%
! AAGCAAGATAAAGTTCATTT+GGG + chr1_1:7717509-7717528 Msa0005260:CDS 25.0%
! ACATCTTTGATAAACATGAA+GGG + chr1_1:7717556-7717575 Msa0005260:CDS 25.0%
! ATAACACAAGTGTTAAAGAT+TGG + chr1_1:7717795-7717814 Msa0005260:CDS 25.0%
! ATATTGGGAATGTTGTTAAA+AGG + chr1_1:7717868-7717887 Msa0005260:CDS 25.0%
!! ACTTTCATCTGTTTTCAAAA+GGG + chr1_1:7716981-7717000 Msa0005260:CDS 25.0%
!! TGTAATTCATGACACTTTTA+TGG + chr1_1:7717008-7717027 Msa0005260:CDS 25.0%
! AATTCTGTGAATTCAGTAAT+GGG + chr1_1:7717229-7717248 Msa0005260:CDS 25.0%
! AAAGCAAGATAAAGTTCATT+TGG + chr1_1:7717508-7717527 Msa0005260:CDS 25.0%
! AAGCAAGATAAAGTTCATTT+GGG + chr1_1:7717509-7717528 Msa0005260:CDS 25.0%
! ACATCTTTGATAAACATGAA+GGG + chr1_1:7717556-7717575 Msa0005260:CDS 25.0%
! ATAACACAAGTGTTAAAGAT+TGG + chr1_1:7717795-7717814 Msa0005260:CDS 25.0%
! ATATTGGGAATGTTGTTAAA+AGG + chr1_1:7717868-7717887 Msa0005260:CDS 25.0%
TGTAAAGAAGCTTCAAAAGA+CGG - chr1_1:7716928-7716947 None:intergenic 30.0%
! CACTTTCATCTGTTTTCAAA+AGG + chr1_1:7716980-7716999 Msa0005260:CDS 30.0%
! TTACAGTTTTCTCTTCCATT+TGG + chr1_1:7717100-7717119 Msa0005260:CDS 30.0%
! TACAGTTTTCTCTTCCATTT+GGG + chr1_1:7717101-7717120 Msa0005260:CDS 30.0%
TATCATTGATGTTCCTTCTA+TGG + chr1_1:7717158-7717177 Msa0005260:CDS 30.0%
GAATTCTGTGAATTCAGTAA+TGG + chr1_1:7717228-7717247 Msa0005260:CDS 30.0%
AAATTGAACAGATTGCAACT+GGG + chr1_1:7717478-7717497 Msa0005260:CDS 30.0%
GACATCTTTGATAAACATGA+AGG + chr1_1:7717555-7717574 Msa0005260:CDS 30.0%
AAAAGAGGTGAACTTTCAAA+AGG + chr1_1:7717579-7717598 Msa0005260:CDS 30.0%
AAAGAGGTGAACTTTCAAAA+GGG + chr1_1:7717580-7717599 Msa0005260:CDS 30.0%
GTTATCAAAACACAGTTTCT+TGG - chr1_1:7717780-7717799 None:intergenic 30.0%
! ACAAGTGTTAAAGATTGGTT+TGG + chr1_1:7717800-7717819 Msa0005260:CDS 30.0%
GAATGTTGTTAAAAGGTTGA+TGG + chr1_1:7717875-7717894 Msa0005260:CDS 30.0%
TGTAAAGAAGCTTCAAAAGA+CGG - chr1_1:7716928-7716947 None:intergenic 30.0%
! CACTTTCATCTGTTTTCAAA+AGG + chr1_1:7716980-7716999 Msa0005260:CDS 30.0%
! TTACAGTTTTCTCTTCCATT+TGG + chr1_1:7717100-7717119 Msa0005260:CDS 30.0%
! TACAGTTTTCTCTTCCATTT+GGG + chr1_1:7717101-7717120 Msa0005260:CDS 30.0%
TATCATTGATGTTCCTTCTA+TGG + chr1_1:7717158-7717177 Msa0005260:CDS 30.0%
GAATTCTGTGAATTCAGTAA+TGG + chr1_1:7717228-7717247 Msa0005260:CDS 30.0%
AAATTGAACAGATTGCAACT+GGG + chr1_1:7717478-7717497 Msa0005260:CDS 30.0%
GACATCTTTGATAAACATGA+AGG + chr1_1:7717555-7717574 Msa0005260:CDS 30.0%
AAAAGAGGTGAACTTTCAAA+AGG + chr1_1:7717579-7717598 Msa0005260:CDS 30.0%
AAAGAGGTGAACTTTCAAAA+GGG + chr1_1:7717580-7717599 Msa0005260:CDS 30.0%
GTTATCAAAACACAGTTTCT+TGG - chr1_1:7717780-7717799 None:intergenic 30.0%
! ACAAGTGTTAAAGATTGGTT+TGG + chr1_1:7717800-7717819 Msa0005260:CDS 30.0%
GAATGTTGTTAAAAGGTTGA+TGG + chr1_1:7717875-7717894 Msa0005260:CDS 30.0%
GAAAAACTCCAATTGAAAGC+TGG + chr1_1:7717133-7717152 Msa0005260:CDS 35.0%
ATGATATGCCAGCTTTCAAT+TGG - chr1_1:7717144-7717163 None:intergenic 35.0%
ATTGATGTTCCTTCTATGGA+AGG + chr1_1:7717162-7717181 Msa0005260:CDS 35.0%
AATACAAGCAGAGTAATCGA+AGG + chr1_1:7717261-7717280 Msa0005260:CDS 35.0%
TTCTCTATCAACTCCAAGTA+AGG - chr1_1:7717288-7717307 None:intergenic 35.0%
TTCAATTTGATCCTCTGTCA+AGG - chr1_1:7717466-7717485 None:intergenic 35.0%
CAAATTGAACAGATTGCAAC+TGG + chr1_1:7717477-7717496 Msa0005260:CDS 35.0%
GATAAACATGAAGGGAAAAG+AGG + chr1_1:7717564-7717583 Msa0005260:CDS 35.0%
!! TACCTTAGAGAGCATTTCAA+TGG + chr1_1:7717716-7717735 Msa0005260:CDS 35.0%
!! ACCTTAGAGAGCATTTCAAT+GGG + chr1_1:7717717-7717736 Msa0005260:CDS 35.0%
!! AAAGATTGGTTTGGTTGTGA+AGG + chr1_1:7717809-7717828 Msa0005260:CDS 35.0%
TTGGGCTAAAAGACATGAAT+TGG + chr1_1:7717833-7717852 Msa0005260:CDS 35.0%
TTGGTTACTGCTTCAGATAT+TGG + chr1_1:7717852-7717871 Msa0005260:CDS 35.0%
TGGTTACTGCTTCAGATATT+GGG + chr1_1:7717853-7717872 Msa0005260:CDS 35.0%
!! TAAAAGGTTGATGGAGACAA+TGG + chr1_1:7717884-7717903 Msa0005260:CDS 35.0%
AAATGTTGTTGGTACGTCAA+TGG + chr1_1:7717944-7717963 Msa0005260:CDS 35.0%
GAAAAACTCCAATTGAAAGC+TGG + chr1_1:7717133-7717152 Msa0005260:CDS 35.0%
ATGATATGCCAGCTTTCAAT+TGG - chr1_1:7717144-7717163 None:intergenic 35.0%
ATTGATGTTCCTTCTATGGA+AGG + chr1_1:7717162-7717181 Msa0005260:CDS 35.0%
AATACAAGCAGAGTAATCGA+AGG + chr1_1:7717261-7717280 Msa0005260:CDS 35.0%
TTCTCTATCAACTCCAAGTA+AGG - chr1_1:7717288-7717307 None:intergenic 35.0%
TTCAATTTGATCCTCTGTCA+AGG - chr1_1:7717466-7717485 None:intergenic 35.0%
CAAATTGAACAGATTGCAAC+TGG + chr1_1:7717477-7717496 Msa0005260:CDS 35.0%
GATAAACATGAAGGGAAAAG+AGG + chr1_1:7717564-7717583 Msa0005260:CDS 35.0%
!! TACCTTAGAGAGCATTTCAA+TGG + chr1_1:7717716-7717735 Msa0005260:CDS 35.0%
!! ACCTTAGAGAGCATTTCAAT+GGG + chr1_1:7717717-7717736 Msa0005260:CDS 35.0%
!! AAAGATTGGTTTGGTTGTGA+AGG + chr1_1:7717809-7717828 Msa0005260:CDS 35.0%
TTGGGCTAAAAGACATGAAT+TGG + chr1_1:7717833-7717852 Msa0005260:CDS 35.0%
TTGGTTACTGCTTCAGATAT+TGG + chr1_1:7717852-7717871 Msa0005260:CDS 35.0%
TGGTTACTGCTTCAGATATT+GGG + chr1_1:7717853-7717872 Msa0005260:CDS 35.0%
!! TAAAAGGTTGATGGAGACAA+TGG + chr1_1:7717884-7717903 Msa0005260:CDS 35.0%
AAATGTTGTTGGTACGTCAA+TGG + chr1_1:7717944-7717963 Msa0005260:CDS 35.0%
! TGACACTTTTATGGCATCAG+TGG + chr1_1:7717017-7717036 Msa0005260:CDS 40.0%
TCTTCCATTTGGGAGAGAAT+GGG + chr1_1:7717111-7717130 Msa0005260:CDS 40.0%
! TTTTCCCATTCTCTCCCAAA+TGG - chr1_1:7717118-7717137 None:intergenic 40.0%
CCATCATGAAATCGACGAAT+TGG - chr1_1:7717200-7717219 None:intergenic 40.0%
!! CCAATTCGTCGATTTCATGA+TGG + chr1_1:7717197-7717216 Msa0005260:CDS 40.0%
CGATTTCATGATGGCACAAA+TGG + chr1_1:7717206-7717225 Msa0005260:CDS 40.0%
AGTAATCGAAGGTCCTTACT+TGG + chr1_1:7717272-7717291 Msa0005260:CDS 40.0%
! TCACTTGCAATAAGAAGCAC+TGG + chr1_1:7717310-7717329 Msa0005260:CDS 40.0%
!! CACTTGCAATAAGAAGCACT+GGG + chr1_1:7717311-7717330 Msa0005260:CDS 40.0%
TCAATGCTTAGAGGGTTGAA+GGG - chr1_1:7717345-7717364 None:intergenic 40.0%
!! TTCAACCCTCTAAGCATTGA+GGG + chr1_1:7717345-7717364 Msa0005260:CDS 40.0%
TGAGGGGAAGAAAGATTCAA+AGG + chr1_1:7717362-7717381 Msa0005260:CDS 40.0%
GAGGGGAAGAAAGATTCAAA+GGG + chr1_1:7717363-7717382 Msa0005260:CDS 40.0%
AACAACAACAACCTTGACAG+AGG + chr1_1:7717452-7717471 Msa0005260:CDS 40.0%
GTGTTGAGAGATGCTGATAA+AGG + chr1_1:7717531-7717550 Msa0005260:CDS 40.0%
TGAAGAGAGAGTTGAAGGAA+TGG + chr1_1:7717605-7717624 Msa0005260:CDS 40.0%
GAAGAGAGAGTTGAAGGAAT+GGG + chr1_1:7717606-7717625 Msa0005260:CDS 40.0%
TGGCTAAGAATTTCCAACTG+GGG - chr1_1:7717654-7717673 None:intergenic 40.0%
GTGGCTAAGAATTTCCAACT+GGG - chr1_1:7717655-7717674 None:intergenic 40.0%
AATTCTTAGCCACCCTTCAA+CGG + chr1_1:7717662-7717681 Msa0005260:CDS 40.0%
GGTTTATGAGTCATTGTGGA+TGG + chr1_1:7717688-7717707 Msa0005260:CDS 40.0%
!! CCTTAGAGAGCATTTCAATG+GGG + chr1_1:7717718-7717737 Msa0005260:CDS 40.0%
!! CTTAGAGAGCATTTCAATGG+GGG + chr1_1:7717719-7717738 Msa0005260:CDS 40.0%
TCAAAACACAGTTTCTTGGC+TGG - chr1_1:7717776-7717795 None:intergenic 40.0%
!! TTGGTTTGGTTGTGAAGGAT+TGG + chr1_1:7717814-7717833 Msa0005260:CDS 40.0%
!! TGGTTTGGTTGTGAAGGATT+GGG + chr1_1:7717815-7717834 Msa0005260:CDS 40.0%
TGGAGTTTCTCGTATGGAAA+TGG + chr1_1:7717974-7717993 Msa0005260:CDS 40.0%
! TGACACTTTTATGGCATCAG+TGG + chr1_1:7717017-7717036 Msa0005260:CDS 40.0%
TCTTCCATTTGGGAGAGAAT+GGG + chr1_1:7717111-7717130 Msa0005260:CDS 40.0%
! TTTTCCCATTCTCTCCCAAA+TGG - chr1_1:7717118-7717137 None:intergenic 40.0%
CCATCATGAAATCGACGAAT+TGG - chr1_1:7717200-7717219 None:intergenic 40.0%
!! CCAATTCGTCGATTTCATGA+TGG + chr1_1:7717197-7717216 Msa0005260:CDS 40.0%
CGATTTCATGATGGCACAAA+TGG + chr1_1:7717206-7717225 Msa0005260:CDS 40.0%
AGTAATCGAAGGTCCTTACT+TGG + chr1_1:7717272-7717291 Msa0005260:CDS 40.0%
! TCACTTGCAATAAGAAGCAC+TGG + chr1_1:7717310-7717329 Msa0005260:CDS 40.0%
!! CACTTGCAATAAGAAGCACT+GGG + chr1_1:7717311-7717330 Msa0005260:CDS 40.0%
TCAATGCTTAGAGGGTTGAA+GGG - chr1_1:7717345-7717364 None:intergenic 40.0%
!! TTCAACCCTCTAAGCATTGA+GGG + chr1_1:7717345-7717364 Msa0005260:CDS 40.0%
TGAGGGGAAGAAAGATTCAA+AGG + chr1_1:7717362-7717381 Msa0005260:CDS 40.0%
GAGGGGAAGAAAGATTCAAA+GGG + chr1_1:7717363-7717382 Msa0005260:CDS 40.0%
AACAACAACAACCTTGACAG+AGG + chr1_1:7717452-7717471 Msa0005260:CDS 40.0%
GTGTTGAGAGATGCTGATAA+AGG + chr1_1:7717531-7717550 Msa0005260:CDS 40.0%
TGAAGAGAGAGTTGAAGGAA+TGG + chr1_1:7717605-7717624 Msa0005260:CDS 40.0%
GAAGAGAGAGTTGAAGGAAT+GGG + chr1_1:7717606-7717625 Msa0005260:CDS 40.0%
TGGCTAAGAATTTCCAACTG+GGG - chr1_1:7717654-7717673 None:intergenic 40.0%
GTGGCTAAGAATTTCCAACT+GGG - chr1_1:7717655-7717674 None:intergenic 40.0%
AATTCTTAGCCACCCTTCAA+CGG + chr1_1:7717662-7717681 Msa0005260:CDS 40.0%
GGTTTATGAGTCATTGTGGA+TGG + chr1_1:7717688-7717707 Msa0005260:CDS 40.0%
!! CCTTAGAGAGCATTTCAATG+GGG + chr1_1:7717718-7717737 Msa0005260:CDS 40.0%
!! CTTAGAGAGCATTTCAATGG+GGG + chr1_1:7717719-7717738 Msa0005260:CDS 40.0%
TCAAAACACAGTTTCTTGGC+TGG - chr1_1:7717776-7717795 None:intergenic 40.0%
!! TTGGTTTGGTTGTGAAGGAT+TGG + chr1_1:7717814-7717833 Msa0005260:CDS 40.0%
!! TGGTTTGGTTGTGAAGGATT+GGG + chr1_1:7717815-7717834 Msa0005260:CDS 40.0%
TGGAGTTTCTCGTATGGAAA+TGG + chr1_1:7717974-7717993 Msa0005260:CDS 40.0%
CTCTTCCATTTGGGAGAGAA+TGG + chr1_1:7717110-7717129 Msa0005260:CDS 45.0%
! GTGAAGCATCCTTCCATAGA+AGG - chr1_1:7717174-7717193 None:intergenic 45.0%
!! AATAAGAAGCACTGGGCAGT+GGG + chr1_1:7717318-7717337 Msa0005260:CDS 45.0%
CTCAATGCTTAGAGGGTTGA+AGG - chr1_1:7717346-7717365 None:intergenic 45.0%
! CTTCAACCCTCTAAGCATTG+AGG + chr1_1:7717344-7717363 Msa0005260:CDS 45.0%
!! TCAACCCTCTAAGCATTGAG+GGG + chr1_1:7717346-7717365 Msa0005260:CDS 45.0%
TCTTCCCCTCAATGCTTAGA+GGG - chr1_1:7717353-7717372 None:intergenic 45.0%
TTCTTCCCCTCAATGCTTAG+AGG - chr1_1:7717354-7717373 None:intergenic 45.0%
AAAGGGTAGACACTCATGCA+TGG + chr1_1:7717380-7717399 Msa0005260:CDS 45.0%
GTAGACACTCATGCATGGAA+TGG + chr1_1:7717385-7717404 Msa0005260:CDS 45.0%
GGGTTTGAAGAGAGAGTTGA+AGG + chr1_1:7717600-7717619 Msa0005260:CDS 45.0%
!! AAGGAATGGGCTTTGTTGTG+AGG + chr1_1:7717619-7717638 Msa0005260:CDS 45.0%
!! AGGAATGGGCTTTGTTGTGA+GGG + chr1_1:7717620-7717639 Msa0005260:CDS 45.0%
GGTGGCTAAGAATTTCCAAC+TGG - chr1_1:7717656-7717675 None:intergenic 45.0%
ATTCTTAGCCACCCTTCAAC+GGG + chr1_1:7717663-7717682 Msa0005260:CDS 45.0%
TCATAAACCCTCCCGTTGAA+GGG - chr1_1:7717677-7717696 None:intergenic 45.0%
GGAGGGTTTATGAGTCATTG+TGG + chr1_1:7717684-7717703 Msa0005260:CDS 45.0%
CCCCATTGAAATGCTCTCTA+AGG - chr1_1:7717721-7717740 None:intergenic 45.0%
TGCATAGGCCATACTGCTAT+TGG - chr1_1:7717747-7717766 None:intergenic 45.0%
!! AGGTTGATGGAGACAATGGA+AGG + chr1_1:7717888-7717907 Msa0005260:CDS 45.0%
GTTGGTACGTCAATGGATGA+AGG + chr1_1:7717951-7717970 Msa0005260:CDS 45.0%
TGAAGGTGGAGTTTCTCGTA+TGG + chr1_1:7717968-7717987 Msa0005260:CDS 45.0%
CTCTTCCATTTGGGAGAGAA+TGG + chr1_1:7717110-7717129 Msa0005260:CDS 45.0%
! GTGAAGCATCCTTCCATAGA+AGG - chr1_1:7717174-7717193 None:intergenic 45.0%
!! AATAAGAAGCACTGGGCAGT+GGG + chr1_1:7717318-7717337 Msa0005260:CDS 45.0%
CTCAATGCTTAGAGGGTTGA+AGG - chr1_1:7717346-7717365 None:intergenic 45.0%
! CTTCAACCCTCTAAGCATTG+AGG + chr1_1:7717344-7717363 Msa0005260:CDS 45.0%
!! TCAACCCTCTAAGCATTGAG+GGG + chr1_1:7717346-7717365 Msa0005260:CDS 45.0%
TCTTCCCCTCAATGCTTAGA+GGG - chr1_1:7717353-7717372 None:intergenic 45.0%
TTCTTCCCCTCAATGCTTAG+AGG - chr1_1:7717354-7717373 None:intergenic 45.0%
AAAGGGTAGACACTCATGCA+TGG + chr1_1:7717380-7717399 Msa0005260:CDS 45.0%
GTAGACACTCATGCATGGAA+TGG + chr1_1:7717385-7717404 Msa0005260:CDS 45.0%
GGGTTTGAAGAGAGAGTTGA+AGG + chr1_1:7717600-7717619 Msa0005260:CDS 45.0%
!! AAGGAATGGGCTTTGTTGTG+AGG + chr1_1:7717619-7717638 Msa0005260:CDS 45.0%
!! AGGAATGGGCTTTGTTGTGA+GGG + chr1_1:7717620-7717639 Msa0005260:CDS 45.0%
GGTGGCTAAGAATTTCCAAC+TGG - chr1_1:7717656-7717675 None:intergenic 45.0%
ATTCTTAGCCACCCTTCAAC+GGG + chr1_1:7717663-7717682 Msa0005260:CDS 45.0%
TCATAAACCCTCCCGTTGAA+GGG - chr1_1:7717677-7717696 None:intergenic 45.0%
GGAGGGTTTATGAGTCATTG+TGG + chr1_1:7717684-7717703 Msa0005260:CDS 45.0%
CCCCATTGAAATGCTCTCTA+AGG - chr1_1:7717721-7717740 None:intergenic 45.0%
TGCATAGGCCATACTGCTAT+TGG - chr1_1:7717747-7717766 None:intergenic 45.0%
!! AGGTTGATGGAGACAATGGA+AGG + chr1_1:7717888-7717907 Msa0005260:CDS 45.0%
GTTGGTACGTCAATGGATGA+AGG + chr1_1:7717951-7717970 Msa0005260:CDS 45.0%
TGAAGGTGGAGTTTCTCGTA+TGG + chr1_1:7717968-7717987 Msa0005260:CDS 45.0%
TTTACATCTTCGCGAGCCTG+TGG + chr1_1:7716942-7716961 Msa0005260:CDS 50.0%
!! CAATAAGAAGCACTGGGCAG+TGG + chr1_1:7717317-7717336 Msa0005260:CDS 50.0%
!! ATAAGAAGCACTGGGCAGTG+GGG + chr1_1:7717319-7717338 Msa0005260:CDS 50.0%
!! TGGGCTTTGTTGTGAGGGAT+TGG + chr1_1:7717625-7717644 Msa0005260:CDS 50.0%
!! GGGCTTTGTTGTGAGGGATT+GGG + chr1_1:7717626-7717645 Msa0005260:CDS 50.0%
CTCATAAACCCTCCCGTTGA+AGG - chr1_1:7717678-7717697 None:intergenic 50.0%
! CTTGGCTGGTCAGAATGCAT+AGG - chr1_1:7717762-7717781 None:intergenic 50.0%
GGTACGTCAATGGATGAAGG+TGG + chr1_1:7717954-7717973 Msa0005260:CDS 50.0%
TTTACATCTTCGCGAGCCTG+TGG + chr1_1:7716942-7716961 Msa0005260:CDS 50.0%
!! CAATAAGAAGCACTGGGCAG+TGG + chr1_1:7717317-7717336 Msa0005260:CDS 50.0%
!! ATAAGAAGCACTGGGCAGTG+GGG + chr1_1:7717319-7717338 Msa0005260:CDS 50.0%
!! TGGGCTTTGTTGTGAGGGAT+TGG + chr1_1:7717625-7717644 Msa0005260:CDS 50.0%
!! GGGCTTTGTTGTGAGGGATT+GGG + chr1_1:7717626-7717645 Msa0005260:CDS 50.0%
CTCATAAACCCTCCCGTTGA+AGG - chr1_1:7717678-7717697 None:intergenic 50.0%
! CTTGGCTGGTCAGAATGCAT+AGG - chr1_1:7717762-7717781 None:intergenic 50.0%
GGTACGTCAATGGATGAAGG+TGG + chr1_1:7717954-7717973 Msa0005260:CDS 50.0%
GATTGCATGAGTTCCGCCAC+AGG - chr1_1:7716961-7716980 None:intergenic 55.0%
TTAGCCACCCTTCAACGGGA+GGG + chr1_1:7717667-7717686 Msa0005260:CDS 55.0%
TAAACCCTCCCGTTGAAGGG+TGG - chr1_1:7717674-7717693 None:intergenic 55.0%
!! TGGGGGTGCCAATAGCAGTA+TGG + chr1_1:7717736-7717755 Msa0005260:CDS 55.0%
GATTGCATGAGTTCCGCCAC+AGG - chr1_1:7716961-7716980 None:intergenic 55.0%
TTAGCCACCCTTCAACGGGA+GGG + chr1_1:7717667-7717686 Msa0005260:CDS 55.0%
TAAACCCTCCCGTTGAAGGG+TGG - chr1_1:7717674-7717693 None:intergenic 55.0%
!! TGGGGGTGCCAATAGCAGTA+TGG + chr1_1:7717736-7717755 Msa0005260:CDS 55.0%
ACATCTTCGCGAGCCTGTGG+CGG + chr1_1:7716945-7716964 Msa0005260:CDS 60.0%
CTTAGCCACCCTTCAACGGG+AGG + chr1_1:7717666-7717685 Msa0005260:CDS 60.0%
ACATCTTCGCGAGCCTGTGG+CGG + chr1_1:7716945-7716964 Msa0005260:CDS 60.0%
CTTAGCCACCCTTCAACGGG+AGG + chr1_1:7717666-7717685 Msa0005260:CDS 60.0%
GAGGGATTGGGCACCCCAGT+TGG + chr1_1:7717638-7717657 Msa0005260:CDS 65.0%
GAGGGATTGGGCACCCCAGT+TGG + chr1_1:7717638-7717657 Msa0005260:CDS 65.0%
Chromosome Type Strat End Strand Name
chr1_1 gene 7716919 7718025 7716919 ID=Msa0005260;Name=Msa0005260
chr1_1 mRNA 7716919 7718025 7716919 ID=Msa0005260-mRNA-1;Parent=Msa0005260;Name=Msa0005260-mRNA-1;_AED=0.01;_eAED=0.01;_QI=0|-1|0|1|-1|1|1|0|368
chr1_1 exon 7716919 7718025 7716919 ID=Msa0005260-mRNA-1:exon:2754;Parent=Msa0005260-mRNA-1
chr1_1 CDS 7716919 7718025 7716919 ID=Msa0005260-mRNA-1:cds;Parent=Msa0005260-mRNA-1
Gene Sequence

>Msa0005260

ATGGTTCCGTCTTTTGAAGCTTCTTTACATCTTCGCGAGCCTGTGGCGGAACTCATGCAATCACTTTCATCTGTTTTCAAAAGGGTCATTGTAATTCATGACACTTTTATGGCATCAGTGGTACAAGATGCTATAAACATAGCAAATGTTGAGAATTACACATTTGTTAGCACATGTGCTTTTACAGTTTTCTCTTCCATTTGGGAGAGAATGGGAAAAACTCCAATTGAAAGCTGGCATATCATTGATGTTCCTTCTATGGAAGGATGCTTCACAAACCAATTCGTCGATTTCATGATGGCACAAATGGAATTCTGTGAATTCAGTAATGGGAGCATATACAATACAAGCAGAGTAATCGAAGGTCCTTACTTGGAGTTGATAGAGAAAATCACTTGCAATAAGAAGCACTGGGCAGTGGGGCCCTTCAACCCTCTAAGCATTGAGGGGAAGAAAGATTCAAAGGGTAGACACTCATGCATGGAATGGCTTGATAAACAAGAAACAAACTCAGTTATATATGTATCATTTGGAACAACAACAACCTTGACAGAGGATCAAATTGAACAGATTGCAACTGGGTTGAAACAAAGCAAGATAAAGTTCATTTGGGTGTTGAGAGATGCTGATAAAGGAGACATCTTTGATAAACATGAAGGGAAAAGAGGTGAACTTTCAAAAGGGTTTGAAGAGAGAGTTGAAGGAATGGGCTTTGTTGTGAGGGATTGGGCACCCCAGTTGGAAATTCTTAGCCACCCTTCAACGGGAGGGTTTATGAGTCATTGTGGATGGAACTCTACCTTAGAGAGCATTTCAATGGGGGTGCCAATAGCAGTATGGCCTATGCATTCTGACCAGCCAAGAAACTGTGTTTTGATAACACAAGTGTTAAAGATTGGTTTGGTTGTGAAGGATTGGGCTAAAAGACATGAATTGGTTACTGCTTCAGATATTGGGAATGTTGTTAAAAGGTTGATGGAGACAATGGAAGGTGATGAAATGCGAGAGAGAGCGATAAAACTTAAAAATGTTGTTGGTACGTCAATGGATGAAGGTGGAGTTTCTCGTATGGAAATGGATTCTTTCATCGCTCATATTACTAGATAG

Protein sequence

>Msa0005260

MVPSFEASLHLREPVAELMQSLSSVFKRVIVIHDTFMASVVQDAINIANVENYTFVSTCAFTVFSSIWERMGKTPIESWHIIDVPSMEGCFTNQFVDFMMAQMEFCEFSNGSIYNTSRVIEGPYLELIEKITCNKKHWAVGPFNPLSIEGKKDSKGRHSCMEWLDKQETNSVIYVSFGTTTTLTEDQIEQIATGLKQSKIKFIWVLRDADKGDIFDKHEGKRGELSKGFEERVEGMGFVVRDWAPQLEILSHPSTGGFMSHCGWNSTLESISMGVPIAVWPMHSDQPRNCVLITQVLKIGLVVKDWAKRHELVTASDIGNVVKRLMETMEGDEMRERAIKLKNVVGTSMDEGGVSRMEMDSFIAHITR*