AlfalfaGEDB | Msa0733200

M. sativa cultivar zhongmu-4 / Msa0733200

KEGG: -
GO: GO:0001101 GO:0002218 GO:0002252 GO:0002253 GO:0002376 GO:0002682 GO:0002684 GO:0003674 GO:0003700 GO:0006355 GO:0006950 GO:0006952 GO:0006955 GO:0007154 GO:0007165 GO:0008150 GO:0009605 GO:0009607 GO:0009617 GO:0009620 GO:0009627 GO:0009682 GO:0009719 GO:0009725 GO:0009751 GO:0009753 GO:0009755 GO:0009814 GO:0009862 GO:0009863 GO:0009864 GO:0009867 GO:0009889 GO:0009890 GO:0009892 GO:0009987 GO:0010033 GO:0010200 GO:0010243 GO:0010468 GO:0010556 GO:0010558 GO:0010605 GO:0010629 GO:0014070 GO:0019219 GO:0019222 GO:0023052 GO:0031323 GO:0031324 GO:0031326 GO:0031327 GO:0031347 GO:0031349 GO:0032870 GO:0035690 GO:0042221 GO:0042493 GO:0042742 GO:0043207 GO:0045087 GO:0045088 GO:0045089 GO:0045892 GO:0045934 GO:0046677 GO:0048518 GO:0048519 GO:0048523 GO:0048583 GO:0048584 GO:0048831 GO:0050776 GO:0050778 GO:0050789 GO:0050793 GO:0050794 GO:0050832 GO:0050896 GO:0051093 GO:0051171 GO:0051172 GO:0051239 GO:0051241 GO:0051252 GO:0051253 GO:0051704 GO:0051707 GO:0051716 GO:0060255 GO:0065007 GO:0070887 GO:0071229 GO:0071236 GO:0071310 GO:0071395 GO:0071407 GO:0071446 GO:0071495 GO:0080090 GO:0080134 GO:0098542 GO:0140110 GO:1900055 GO:1900056 GO:1901698 GO:1901700 GO:1901701 GO:1902679 GO:1903506 GO:1903507 GO:1905622 GO:2000024 GO:2000026 GO:2000112 GO:2000113 GO:2001141
PFAM: PF03106.18

Nr:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
Msa0733200	XP_003615415.1	96.250	240	5	3	1	240	1	236	1.59e-167	471

Swissprot:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
Msa0733200	sp\|Q9LY00\|WRK70_ARATH	39.640	222	106	8	1	200	1	216	5.41e-40	142

Trembl:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
Msa0733200	G7K643	96.250	240	5	3	1	240	1	236	7.61e-168	471

TFs/TRs:

Gene ID	Type	Classification
Msa0733200	TF	WRKY

Protein Kinases:

Gene ID	Type	Classification

Network:

Co-expression Network

Gene1	Gene2	correlation coefficient	p_value	FDR
Msa0088550	Msa0733200	0.805634	1.214404e-49	-8.615850e-47
Msa0616560	Msa0733200	-0.829398	5.263022e-55	-8.615850e-47
Msa0617560	Msa0733200	-0.806562	7.743640e-50	-8.615850e-47
Msa0655990	Msa0733200	-0.818724	1.687991e-52	-8.615850e-47
Msa0699920	Msa0733200	-0.803657	3.140378e-49	-8.615850e-47
Msa0733200	Msa0736060	0.837780	4.247265e-57	-8.615850e-47
Msa0733200	Msa0773610	0.800711	1.267990e-48	-8.615850e-47
Msa0733200	Msa0774240	0.821544	3.815320e-53	-8.615850e-47
Msa0733200	Msa0777930	0.812420	4.278017e-51	-8.615850e-47
Msa0733200	Msa0811790	0.830571	2.725154e-55	-8.615850e-47
Msa0733200	Msa0815180	0.821350	4.230120e-53	-8.615850e-47
Msa0733200	Msa0839230	0.815332	9.761011e-52	-8.615850e-47
Msa0733200	Msa0912470	0.820571	6.394844e-53	-8.615850e-47
Msa0733200	Msa0986780	0.809113	2.221772e-50	-8.615850e-47
Msa0733200	Msa0987890	0.823466	1.364686e-53	-8.615850e-47
Msa0733200	Msa1008340	0.804095	2.546000e-49	-8.615850e-47
Msa0733200	Msa1026500	0.814073	1.855251e-51	-8.615850e-47
Msa0733200	Msa1044090	0.842195	2.998360e-58	-8.615850e-47
Msa0733200	Msa1083410	0.802244	6.151372e-49	-8.615850e-47
Msa0733200	Msa1111760	0.813365	2.655397e-51	-8.615850e-47
Msa0733200	Msa1139240	0.828417	9.096928e-55	-8.615850e-47
Msa0733200	Msa1154070	0.820545	6.480970e-53	-8.615850e-47
Msa0179860	Msa0733200	0.813372	2.646351e-51	-8.615850e-47
Msa0201330	Msa0733200	0.864694	1.011348e-64	-8.615850e-47
Msa0201370	Msa0733200	0.854594	1.109145e-61	-8.615850e-47
Msa0201390	Msa0733200	0.811984	5.325929e-51	-8.615850e-47
Msa0243910	Msa0733200	0.867034	1.841978e-65	-8.615850e-47
Msa0243930	Msa0733200	0.876939	9.364575e-69	-8.615850e-47
Msa0243940	Msa0733200	0.823433	1.388514e-53	-8.615850e-47
Msa0282590	Msa0733200	0.843789	1.129064e-58	-8.615850e-47
Msa0282600	Msa0733200	0.825025	5.868764e-54	-8.615850e-47
Msa0362740	Msa0733200	0.803184	3.934837e-49	-8.615850e-47
Msa0562650	Msa0733200	0.834377	3.104364e-56	-8.615850e-47

PPI

Gene1	Gene2	Type

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
Msa0733200	MtrunA17_Chr5g0428351	96.250	240	5	3	1	240	78	313	7.40e-170	470
Msa0733200	MtrunA17_Chr3g0128671	42.748	262	98	13	20	238	23	275	3.16e-47	158
Msa0733200	MtrunA17_Chr7g0244981	38.793	232	114	9	1	206	1	230	5.11e-40	139
Msa0733200	MtrunA17_Chr7g0244971	40.782	179	90	4	4	167	5	182	4.71e-38	134
Msa0733200	MtrunA17_Chr8g0334541	42.138	159	86	3	15	168	6	163	5.09e-34	123
Msa0733200	MtrunA17_Chr8g0350621	40.964	166	82	7	15	167	8	170	4.02e-31	115
Msa0733200	MtrunA17_Chr2g0315361	41.667	120	66	2	92	207	131	250	7.06e-25	100
Msa0733200	MtrunA17_Chr2g0315371	27.854	219	119	4	5	188	7	221	8.73e-25	99.8
Msa0733200	MtrunA17_Chr2g0315381	37.097	124	73	2	66	188	105	224	2.84e-24	98.6
Msa0733200	MtrunA17_Chr7g0275531	32.571	175	96	6	10	167	8	177	1.13e-22	94.4
Msa0733200	MtrunA17_Chr8g0347251	50.685	73	36	0	101	173	129	201	1.62e-20	88.6
Msa0733200	MtrunA17_Chr3g0126391	28.358	268	150	9	12	240	5	269	2.22e-19	85.5
Msa0733200	MtrunA17_Chr8g0387981	30.055	183	98	6	13	167	11	191	7.66e-18	81.3
Msa0733200	MtrunA17_Chr8g0387501	50.769	65	30	1	101	165	122	184	1.34e-14	71.2
Msa0733200	MtrunA17_Chr7g0224801	50.000	58	26	1	109	166	94	148	3.81e-14	68.2
Msa0733200	MtrunA17_Chr4g0071521	42.857	84	39	2	89	165	219	300	9.14e-14	69.3
Msa0733200	MtrunA17_Chr1g0147881	42.857	84	39	3	89	165	236	317	3.13e-13	68.2
Msa0733200	MtrunA17_Chr5g0418781	35.135	111	56	6	107	213	123	221	3.81e-13	67.4
Msa0733200	MtrunA17_Chr1g0202461	41.250	80	40	2	91	165	239	316	1.18e-12	66.6
Msa0733200	MtrunA17_Chr5g0431811	39.189	74	41	1	109	182	673	742	1.60e-12	66.6
Msa0733200	MtrunA17_Chr5g0401821	41.463	82	46	1	84	165	175	254	2.20e-12	65.1
Msa0733200	MtrunA17_Chr8g0348311	47.541	61	30	1	109	169	156	214	6.00e-12	64.3
Msa0733200	MtrunA17_Chr4g0051881	36.471	85	51	1	107	191	177	258	6.98e-12	64.3
Msa0733200	MtrunA17_Chr7g0238921	46.032	63	31	1	109	171	125	184	7.74e-12	63.9
Msa0733200	MtrunA17_Chr2g0293481	50.000	54	25	1	112	165	271	322	1.38e-11	63.5
Msa0733200	MtrunA17_Chr1g0194481	42.647	68	35	2	109	176	159	222	1.68e-11	63.2
Msa0733200	MtrunA17_Chr8g0386241	37.333	75	43	2	109	183	104	174	1.96e-11	61.2
Msa0733200	MtrunA17_Chr2g0284321	32.061	131	64	5	109	234	36	146	2.11e-11	61.6
Msa0733200	MtrunA17_Chr1g0184691	38.372	86	51	1	86	171	271	354	2.63e-11	62.4
Msa0733200	MtrunA17_Chr4g0053281	39.759	83	48	1	83	165	241	321	3.06e-11	62.4
Msa0733200	MtrunA17_Chr5g0443131	30.328	122	77	3	107	226	156	271	3.54e-11	62.0
Msa0733200	MtrunA17_Chr8g0379461	32.031	128	62	3	109	236	77	179	8.44e-11	60.1
Msa0733200	MtrunA17_Chr2g0294231	42.029	69	36	2	109	177	204	268	9.45e-11	60.8

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
Msa0733200	AT3G56400.1	39.640	222	106	8	1	200	1	216	5.50e-41	142
Msa0733200	AT2G40750.1	36.199	221	95	9	2	178	4	222	7.21e-34	125
Msa0733200	AT1G66550.1	33.937	221	129	9	15	222	10	226	2.56e-26	103
Msa0733200	AT1G66550.2	34.545	220	124	9	15	222	10	221	5.01e-26	102
Msa0733200	AT5G01900.1	37.500	168	83	5	15	167	9	169	3.93e-25	100
Msa0733200	AT2G46400.1	31.658	199	110	7	9	189	3	193	6.48e-24	97.4
Msa0733200	AT1G66600.1	31.674	221	128	6	15	222	10	220	2.67e-23	94.7
Msa0733200	AT1G66560.1	31.019	216	127	7	15	216	10	217	3.94e-22	91.7
Msa0733200	AT5G22570.1	34.831	178	98	5	15	182	11	180	1.70e-21	90.9
Msa0733200	AT5G24110.1	35.099	151	73	4	41	176	41	181	3.61e-21	90.1
Msa0733200	AT1G80590.1	30.556	216	126	4	15	228	10	203	8.36e-21	87.8
Msa0733200	AT2G40740.1	44.330	97	43	3	91	176	147	243	1.09e-20	89.0
Msa0733200	AT2G40740.3	44.330	97	43	3	91	176	156	252	1.36e-20	88.6
Msa0733200	AT4G23810.1	39.640	111	64	1	109	219	159	266	8.18e-20	87.0
Msa0733200	AT4G11070.2	31.737	167	100	5	11	168	8	169	1.14e-18	83.2
Msa0733200	AT4G11070.1	53.333	60	28	0	109	168	142	201	6.39e-18	81.6
Msa0733200	AT5G45260.1	42.308	78	42	1	91	165	1188	1265	3.00e-15	75.1
Msa0733200	AT5G52830.1	36.190	105	45	2	109	193	166	268	2.17e-13	68.9
Msa0733200	AT4G31550.1	40.698	86	49	1	83	168	221	304	1.39e-12	66.6
Msa0733200	AT4G23550.1	37.234	94	53	2	107	200	139	226	2.58e-12	65.5
Msa0733200	AT1G29280.1	49.123	57	27	1	109	165	75	129	3.08e-12	65.1
Msa0733200	AT5G49520.1	46.552	58	28	1	109	166	222	276	4.45e-12	65.5
Msa0733200	AT5G13080.1	44.828	58	29	1	109	166	68	122	6.00e-12	62.0
Msa0733200	AT1G30650.1	28.655	171	78	3	88	216	186	354	7.39e-12	64.7
Msa0733200	AT4G31550.2	40.000	85	49	1	84	168	221	303	8.63e-12	64.3
Msa0733200	AT3G01970.1	44.828	58	29	1	109	166	66	120	1.16e-11	61.2
Msa0733200	AT2G34830.1	35.955	89	44	2	88	165	184	270	1.20e-11	64.3
Msa0733200	AT2G34830.2	40.230	87	38	3	91	165	195	279	1.37e-11	63.9
Msa0733200	AT2G46130.1	38.462	91	45	3	75	165	5	84	1.84e-11	59.7
Msa0733200	AT1G69310.4	43.750	64	32	2	107	170	146	205	1.92e-11	62.8
Msa0733200	AT1G69310.2	43.750	64	32	2	107	170	146	205	1.92e-11	62.8
Msa0733200	AT1G69310.1	43.750	64	32	2	107	170	146	205	1.92e-11	62.8
Msa0733200	AT4G01250.1	35.354	99	60	3	69	165	87	183	2.78e-11	62.4
Msa0733200	AT2G25000.2	42.466	73	39	2	104	176	99	168	3.59e-11	61.6
Msa0733200	AT2G25000.4	42.466	73	39	2	104	176	99	168	3.59e-11	61.6
Msa0733200	AT1G64000.1	43.860	57	29	1	109	165	115	168	3.69e-11	60.8
Msa0733200	AT2G23320.1	39.773	88	44	2	85	165	210	295	3.94e-11	62.4
Msa0733200	AT2G25000.3	42.466	73	39	2	104	176	121	190	5.34e-11	61.2
Msa0733200	AT2G25000.1	42.466	73	39	2	104	176	142	211	5.75e-11	61.6
Msa0733200	AT2G47260.1	36.471	85	49	2	84	166	148	229	5.98e-11	62.0
Msa0733200	AT5G41570.1	34.483	87	48	2	85	165	69	152	6.71e-11	60.1
Msa0733200	AT5G45050.1	37.113	97	39	4	78	165	1152	1235	7.64e-11	62.4
Msa0733200	AT5G45050.4	37.113	97	39	4	78	165	1013	1096	7.97e-11	62.0
Msa0733200	AT5G45050.2	37.113	97	39	4	78	165	1124	1207	8.60e-11	62.0

Find 77 sgRNAs with CRISPR-Local

Find 248 sgRNAs with CRISPR-GE

CRISPR-Local

CRISPR-Local
sgRNA_sequence	on_target_score	Position	Region
TTATTTATCACTACAAATTA+AGG	0.130880	5_1:-46281252	Msa0733200:three_prime_UTR
CAAAATCTAGCACTGGAATT+TGG	0.136957	5_1:-46281388	Msa0733200:CDS
TGTTGCTTTGGTAAATCTTT+AGG	0.163085	5_1:-46280978	Msa0733200:three_prime_UTR
ACTTTCTTTCTAACACTTTC+AGG	0.226424	5_1:+46285115	None:intergenic
ATGATAAGTCAAACAAATTC+AGG	0.241556	5_1:-46280941	Msa0733200:three_prime_UTR
AAAATCTAGCACTGGAATTT+GGG	0.252381	5_1:-46281387	Msa0733200:CDS
AATCATTCATGGAGAAAGTA+TGG	0.268191	5_1:-46282680	Msa0733200:CDS
TCATTAGAAGTACTTGCTTT+AGG	0.273585	5_1:+46281547	None:intergenic
GTTGCTTTGGTAAATCTTTA+GGG	0.281655	5_1:-46280977	Msa0733200:three_prime_UTR
CTGCTTCTGTTAACAATGAT+TGG	0.317426	5_1:-46281052	Msa0733200:three_prime_UTR
CTGAAGAAGAATCTTGAGTT+TGG	0.329999	5_1:+46285054	None:intergenic
AATGATTATCAACAATGGTT+TGG	0.347556	5_1:+46282696	None:intergenic
AAATCATCACAACTTGAGTT+TGG	0.348658	5_1:+46284950	None:intergenic
ATGATTATCAACAATGGTTT+GGG	0.360761	5_1:+46282697	None:intergenic
TGAGGTAAGAGGAGAGAAGA+TGG	0.367492	5_1:+46285230	None:intergenic
CCATTGTTGATAATCATTCA+TGG	0.368964	5_1:-46282691	Msa0733200:CDS
TTAACAATGATTGGAAGAAT+TGG	0.370421	5_1:-46281043	Msa0733200:three_prime_UTR
AGAGGTGGAGGAGGTAAGGA+AGG	0.377323	5_1:-46280887	Msa0733200:three_prime_UTR
CTAAGGCATAATTATTTCTC+TGG	0.377785	5_1:-46285303	None:intergenic
TATTTATCACTACAAATTAA+GGG	0.383213	5_1:-46281251	Msa0733200:three_prime_UTR
ATAGTTAGGCTTGGTGTTGT+TGG	0.389762	5_1:+46281490	None:intergenic
GATAATCAAAGAACTTGTTA+AGG	0.389804	5_1:-46285092	Msa0733200:CDS
GGAAGAGTGCAGCTGAGATA+TGG	0.391667	5_1:-46282730	Msa0733200:CDS
AACAATGGTTTGGGAAACTA+TGG	0.395929	5_1:+46282706	None:intergenic
ACACAATAGGTGTGTGGCGA+TGG	0.402805	5_1:-46280862	None:intergenic
AGAAACTCCGAGTAATGTTA+TGG	0.412327	5_1:-46281446	Msa0733200:CDS
AAGGAGAGGTGGAGGAGGTA+AGG	0.418391	5_1:-46280891	Msa0733200:three_prime_UTR
AAGGAGGATGTATGTTGCTT+TGG	0.428733	5_1:-46280990	Msa0733200:three_prime_UTR
CTTTCTTTCTAACACTTTCA+GGG	0.446465	5_1:+46285116	None:intergenic
TACCTCACAGGAGTTACTTC+AGG	0.451478	5_1:-46281684	Msa0733200:intron
CAAATTCAGGGTATTGTCGC+TGG	0.454913	5_1:-46280928	Msa0733200:three_prime_UTR
AGGTGGAGGAGGTAAGGAAG+GGG	0.455461	5_1:-46280885	Msa0733200:three_prime_UTR
TGCTTGATGTTATTAGCAAA+GGG	0.461289	5_1:-46281100	Msa0733200:three_prime_UTR
GGTAAGGAAGGGGACACAAT+AGG	0.464902	5_1:-46280875	Msa0733200:three_prime_UTR
TAACAATGATTGGAAGAATT+GGG	0.468611	5_1:-46281042	Msa0733200:three_prime_UTR
TAGTAGGTGGGTGATGTTTG+AGG	0.473293	5_1:+46285212	None:intergenic
TATGTAGTTTGATACATGTC+AGG	0.475973	5_1:+46281598	None:intergenic
GAGGTAAGAGGAGAGAAGAT+GGG	0.477971	5_1:+46285231	None:intergenic
AATTAATGAAACTAGGAAGA+AGG	0.482785	5_1:-46284900	Msa0733200:CDS
GAGGTGGAGGAGGTAAGGAA+GGG	0.485435	5_1:-46280886	Msa0733200:three_prime_UTR
TTGCTTGATGTTATTAGCAA+AGG	0.487303	5_1:-46281101	Msa0733200:three_prime_UTR
ATAATCAAAGAACTTGTTAA+GGG	0.491966	5_1:-46285091	Msa0733200:CDS
AAAGAAAGAAGATAATCAAA+TGG	0.497325	5_1:+46285255	None:intergenic
GAAGAGGTTGCTACAAAAGA+AGG	0.499456	5_1:-46284874	Msa0733200:intron
ACTAGGAAGAAGGGAAGAAG+AGG	0.501634	5_1:-46284890	Msa0733200:CDS
AGGTTGCTCAGCAACCAAAC+AGG	0.515216	5_1:-46281641	Msa0733200:CDS
CAGATTCAATTAATGAAACT+AGG	0.520417	5_1:-46284907	Msa0733200:CDS
TCAGGGTATTGTCGCTGGAT+AGG	0.523072	5_1:-46280923	Msa0733200:three_prime_UTR
CTTCAGAACGAGAATCCCTA+TGG	0.526631	5_1:-46285037	Msa0733200:CDS
TAAAGCAAGTACTTCTAATG+AGG	0.529120	5_1:-46281545	Msa0733200:CDS
ATTAATGAAACTAGGAAGAA+GGG	0.536668	5_1:-46284899	Msa0733200:CDS
TGGGTGATGTTTGAGGTAAG+AGG	0.538104	5_1:+46285219	None:intergenic
AGTGTTTCAAAATCTAGCAC+TGG	0.543569	5_1:-46281395	Msa0733200:CDS
TGATAAGTCAAACAAATTCA+GGG	0.552622	5_1:-46280940	Msa0733200:three_prime_UTR
GTATGGGCAGAAGAAAATCA+TGG	0.554126	5_1:-46282663	Msa0733200:CDS
AGCAAGATGATCAGCTCCAT+AGG	0.557040	5_1:+46285021	None:intergenic
AATCAAATGGATGCAAATGA+TGG	0.562278	5_1:+46285268	None:intergenic
CCATGAATGATTATCAACAA+TGG	0.572348	5_1:+46282691	None:intergenic
TCATGGATTCAGAATTCCCC+AGG	0.578681	5_1:-46282646	Msa0733200:intron
AAATCTAGCACTGGAATTTG+GGG	0.581436	5_1:-46281386	Msa0733200:CDS
TAGGAGTGGCGTTGCATGTG+TGG	0.582787	5_1:+46281566	None:intergenic
TGTTCACATAAAGATGATCA+AGG	0.588485	5_1:-46281661	Msa0733200:CDS
GCAAGATGATCAGCTCCATA+GGG	0.589366	5_1:+46285022	None:intergenic
ATCATTCATGGAGAAAGTAT+GGG	0.593517	5_1:-46282679	Msa0733200:CDS
TCACATTCCATAACATTACT+CGG	0.594141	5_1:+46281439	None:intergenic
TGGTAACGCATATGTGGTCA+AGG	0.594322	5_1:-46281009	Msa0733200:three_prime_UTR
ATGTATCAAACTACATACAT+TGG	0.596361	5_1:-46281592	Msa0733200:CDS
TTGCTTTGGTAAATCTTTAG+GGG	0.600494	5_1:-46280976	Msa0733200:three_prime_UTR
AGAAGTACTTGCTTTAGGAG+TGG	0.607162	5_1:+46281552	None:intergenic
GCTGCATGGTAACGCATATG+TGG	0.622879	5_1:-46281015	Msa0733200:three_prime_UTR
AAGGTGCTTAAACGCAAATG+TGG	0.642263	5_1:-46281139	Msa0733200:three_prime_UTR
AAGAATTGGGTGGTGCTGCA+TGG	0.653989	5_1:-46281029	Msa0733200:three_prime_UTR
AAGGGGACACAATAGGTGTG+TGG	0.683944	5_1:-46280868	Msa0733200:three_prime_UTR
TCTCCAAATTCTGAAAACGA+AGG	0.688104	5_1:-46281158	Msa0733200:three_prime_UTR
CAATGATTGGAAGAATTGGG+TGG	0.701393	5_1:-46281039	Msa0733200:three_prime_UTR
TAACGCATATGTGGTCAAGG+AGG	0.716547	5_1:-46281006	Msa0733200:three_prime_UTR
TGTGCTGAGATCTTTCACTG+AGG	0.723147	5_1:-46284993	Msa0733200:CDS

CRISPR-GE

badsite warning	sgRNA_sequence	Strand	Position	Region	GC_content
!!	AAAAAAAAAACATTTATCTA+TGG	+	chr5_1:46282790-46282809	None:intergenic	10.0%
!!!	TTTTTTCTTGGAAAATTAAA+AGG	-	chr5_1:46280978-46280997	Msa0733200:three_prime_UTR	15.0%
!!!	TTTTTCTTGGAAAATTAAAA+GGG	-	chr5_1:46280979-46280998	Msa0733200:three_prime_UTR	15.0%
!!!	TTTTTTTTAATGTGTGAAAT+GGG	+	chr5_1:46282070-46282089	None:intergenic	15.0%
!!!	ATTTTTTTTAATGTGTGAAA+TGG	+	chr5_1:46282071-46282090	None:intergenic	15.0%
!!	TAAAAAAAATAAACAAGTGA+AGG	-	chr5_1:46282081-46282100	Msa0733200:intron	15.0%
!!	AAAGTAGAATATATTCAATA+GGG	-	chr5_1:46282164-46282183	Msa0733200:intron	15.0%
!!	TATTACATTGAAAATTGAAA+TGG	-	chr5_1:46282239-46282258	Msa0733200:intron	15.0%
!!	ATTACATTGAAAATTGAAAT+GGG	-	chr5_1:46282240-46282259	Msa0733200:intron	15.0%
!!	CTAATTATAAGCTTAAATTA+CGG	+	chr5_1:46282411-46282430	None:intergenic	15.0%
!!	CATATTTAATATTGATGAAA+TGG	+	chr5_1:46283225-46283244	None:intergenic	15.0%
!!	CATTTCATCAATATTAAATA+TGG	-	chr5_1:46283223-46283242	Msa0733200:intron	15.0%
!!!	AAGTACTATTTTATAGATTT+TGG	-	chr5_1:46283338-46283357	Msa0733200:intron	15.0%
!!	CAGTTAAAAAATAAAAAGTT+CGG	+	chr5_1:46283818-46283837	None:intergenic	15.0%
!!!	AAATAATTTTGGTTAAGTAA+AGG	-	chr5_1:46284074-46284093	Msa0733200:intron	15.0%
!!!	AATAATTTTGGTTAAGTAAA+GGG	-	chr5_1:46284075-46284094	Msa0733200:intron	15.0%
!!	AATTTCTAATTATGACATTT+GGG	+	chr5_1:46284105-46284124	None:intergenic	15.0%
!!	AAATTTCTAATTATGACATT+TGG	+	chr5_1:46284106-46284125	None:intergenic	15.0%
!!	AACCATTTATAATAAAAACA+CGG	-	chr5_1:46284187-46284206	Msa0733200:intron	15.0%
!!	TTTGGCTAAAAAAAAAAAAT+GGG	+	chr5_1:46284218-46284237	None:intergenic	15.0%
!!!	TTTTGGCTAAAAAAAAAAAA+TGG	+	chr5_1:46284219-46284238	None:intergenic	15.0%
!!	TTATTTATCACTACAAATTA+AGG	-	chr5_1:46284912-46284931	Msa0733200:CDS	15.0%
!!	TATTTATCACTACAAATTAA+GGG	-	chr5_1:46284913-46284932	Msa0733200:CDS	15.0%
!!	AAAGAAAGAAGATAATCAAA+TGG	+	chr5_1:46280912-46280931	None:intergenic	20.0%
!!	TGTGGCTAAAAAAAATTAAT+TGG	+	chr5_1:46281006-46281025	None:intergenic	20.0%
!!!	TATTATCCATTTTATGTATG+TGG	+	chr5_1:46281024-46281043	None:intergenic	20.0%
!!!	ATAATCAAAGAACTTGTTAA+GGG	-	chr5_1:46281073-46281092	Msa0733200:three_prime_UTR	20.0%
!!!	TTATTTTTTTCACATGTAGT+AGG	-	chr5_1:46281357-46281376	Msa0733200:CDS	20.0%
!!!	AAAGCTATAATTTGAAACTT+TGG	+	chr5_1:46281750-46281769	None:intergenic	20.0%
!!!	AACTTAAGAAACTATTGATT+TGG	-	chr5_1:46281875-46281894	Msa0733200:intron	20.0%
!!	TAACTAATCAAAGATAAGAA+AGG	-	chr5_1:46281931-46281950	Msa0733200:intron	20.0%
!!	AGTCTAAAGGAAAAAAATTA+TGG	+	chr5_1:46281992-46282011	None:intergenic	20.0%
!!	CAAAGTAGAATATATTCAAT+AGG	-	chr5_1:46282163-46282182	Msa0733200:intron	20.0%
!!!	GAAGACTATTATTTTACAAA+AGG	-	chr5_1:46282275-46282294	Msa0733200:intron	20.0%
!!	TTAATCTCATTAATACTAGT+TGG	-	chr5_1:46282541-46282560	Msa0733200:intron	20.0%
!!!	AAATGTTTTTTTTTTGTGTG+CGG	-	chr5_1:46282795-46282814	Msa0733200:intron	20.0%
!!!	AACAATGTTTTATGATGATA+TGG	+	chr5_1:46283036-46283055	None:intergenic	20.0%
!!	AAAGGAAAAAAAAAATACCT+GGG	+	chr5_1:46283538-46283557	None:intergenic	20.0%
!!	TAAAGGAAAAAAAAAATACC+TGG	+	chr5_1:46283539-46283558	None:intergenic	20.0%
!!	AAACACTATCAATTGTATTT+GGG	+	chr5_1:46283756-46283775	None:intergenic	20.0%
!!	AAAACACTATCAATTGTATT+TGG	+	chr5_1:46283757-46283776	None:intergenic	20.0%
!!	ATTTCTAATTATGACATTTG+GGG	+	chr5_1:46284104-46284123	None:intergenic	20.0%
!!!	TATAATTTGTCCTAAGTATT+TGG	+	chr5_1:46284151-46284170	None:intergenic	20.0%
!!	TTGGCTAAAAAAAAAAAATG+GGG	+	chr5_1:46284217-46284236	None:intergenic	20.0%
!!	TTTGATAAAAATCAAAACCT+TGG	+	chr5_1:46284249-46284268	None:intergenic	20.0%
!!	TTAATTACCTTAATCAATTG+TGG	-	chr5_1:46284390-46284409	Msa0733200:intron	20.0%
!!	TAATTAACCACAATTGATTA+AGG	+	chr5_1:46284400-46284419	None:intergenic	20.0%
!!!	GATATTCTTGTTTTATAGTT+AGG	+	chr5_1:46284691-46284710	None:intergenic	20.0%
!!!	TAAGCCAAATATTTTTTTGT+AGG	+	chr5_1:46284944-46284963	None:intergenic	20.0%
!	AAGAAAAAAAAGTAGTAGGT+GGG	+	chr5_1:46280967-46280986	None:intergenic	25.0%
!	TTCCAAGAAAAAAAAGTAGT+AGG	+	chr5_1:46280971-46280990	None:intergenic	25.0%
!!	TTTTAGCCACATACATAAAA+TGG	-	chr5_1:46281015-46281034	Msa0733200:three_prime_UTR	25.0%
!!!	GATAATCAAAGAACTTGTTA+AGG	-	chr5_1:46281072-46281091	Msa0733200:three_prime_UTR	25.0%
!	CAGATTCAATTAATGAAACT+AGG	-	chr5_1:46281257-46281276	Msa0733200:three_prime_UTR	25.0%
!	AATTAATGAAACTAGGAAGA+AGG	-	chr5_1:46281264-46281283	Msa0733200:three_prime_UTR	25.0%
!	ATTAATGAAACTAGGAAGAA+GGG	-	chr5_1:46281265-46281284	Msa0733200:three_prime_UTR	25.0%
!!!	TTGACTTTTTTCTATGAACT+TGG	+	chr5_1:46281395-46281414	None:intergenic	25.0%
!!!	TCAAAAACCCTTATTTTTGT+CGG	-	chr5_1:46281411-46281430	Msa0733200:CDS	25.0%
!	TGCAATGATTTCATGAAATT+GGG	-	chr5_1:46281449-46281468	Msa0733200:CDS	25.0%
!	AATGTAACTTCATGATAGTT+CGG	-	chr5_1:46281958-46281977	Msa0733200:intron	25.0%
!	AGGAAAAAAATTATGGCATA+TGG	+	chr5_1:46281985-46282004	None:intergenic	25.0%
!	TACAAAAGGATGACTTATTA+TGG	-	chr5_1:46282289-46282308	Msa0733200:intron	25.0%
!	ACAAAAGGATGACTTATTAT+GGG	-	chr5_1:46282290-46282309	Msa0733200:intron	25.0%
!	AAACCTAAAATGTAAGCTTA+TGG	-	chr5_1:46282670-46282689	Msa0733200:CDS	25.0%
!	ATCTATGGACAATGTATAAT+TGG	+	chr5_1:46282775-46282794	None:intergenic	25.0%
!!!	AATGTTTTTTTTTTGTGTGC+GGG	-	chr5_1:46282796-46282815	Msa0733200:intron	25.0%
!	ATCAGATTACATTTACATGT+AGG	+	chr5_1:46283132-46283151	None:intergenic	25.0%
!	AAATGTAATCTGATTGTATG+TGG	-	chr5_1:46283138-46283157	Msa0733200:intron	25.0%
!!!	CTTTTTTATCAAGCAAACAA+AGG	+	chr5_1:46283192-46283211	None:intergenic	25.0%
!	ATGATTATCAACAATGGTTT+GGG	+	chr5_1:46283470-46283489	None:intergenic	25.0%
!	AATGATTATCAACAATGGTT+TGG	+	chr5_1:46283471-46283490	None:intergenic	25.0%
!	AAGGAAAAAAAAAATACCTG+GGG	+	chr5_1:46283537-46283556	None:intergenic	25.0%
!	ATATATTTCTTTGCACGTAA+AGG	+	chr5_1:46283556-46283575	None:intergenic	25.0%
!	AAATCTTCTTGAATGTACTT+TGG	+	chr5_1:46283687-46283706	None:intergenic	25.0%
!	GAAGTGTAAATAAGTACAAT+AGG	-	chr5_1:46283853-46283872	Msa0733200:intron	25.0%
!	AAGAGTTGTTTACTTCATTT+CGG	+	chr5_1:46283894-46283913	None:intergenic	25.0%
!	TCTTAGTGTAGAATGAATAA+TGG	-	chr5_1:46284043-46284062	Msa0733200:intron	25.0%
!	CTTAGTGTAGAATGAATAAT+GGG	-	chr5_1:46284044-46284063	Msa0733200:intron	25.0%
!!	TGGGTGTACAAAAATAATTT+TGG	-	chr5_1:46284063-46284082	Msa0733200:intron	25.0%
!!!	CTCCGTGTTTTTATTATAAA+TGG	+	chr5_1:46284192-46284211	None:intergenic	25.0%
!!	AAAACCTTGGAAATTGTTTT+TGG	+	chr5_1:46284236-46284255	None:intergenic	25.0%
!!	TTTTCAAAAATATACCTCAC+AGG	-	chr5_1:46284468-46284487	Msa0733200:intron	25.0%
!	ATGTATCAAACTACATACAT+TGG	-	chr5_1:46284572-46284591	Msa0733200:intron	25.0%
!!!	CCAAATATTTTTTTGTAGGA+AGG	+	chr5_1:46284940-46284959	None:intergenic	25.0%
!	CCTTCCTACAAAAAAATATT+TGG	-	chr5_1:46284937-46284956	Msa0733200:CDS	25.0%
!	TTAACAATGATTGGAAGAAT+TGG	-	chr5_1:46285121-46285140	Msa0733200:CDS	25.0%
!	TAACAATGATTGGAAGAATT+GGG	-	chr5_1:46285122-46285141	Msa0733200:CDS	25.0%
!	ATGATAAGTCAAACAAATTC+AGG	-	chr5_1:46285223-46285242	Msa0733200:five_prime_UTR	25.0%
!	TGATAAGTCAAACAAATTCA+GGG	-	chr5_1:46285224-46285243	Msa0733200:five_prime_UTR	25.0%
	AATCAAATGGATGCAAATGA+TGG	+	chr5_1:46280899-46280918	None:intergenic	30.0%
	CAAGAAAAAAAAGTAGTAGG+TGG	+	chr5_1:46280968-46280987	None:intergenic	30.0%
!!!	CACCTACTACTTTTTTTTCT+TGG	-	chr5_1:46280966-46280985	Msa0733200:three_prime_UTR	30.0%
	CTTTCTTTCTAACACTTTCA+GGG	+	chr5_1:46281051-46281070	None:intergenic	30.0%
	ACTTTCTTTCTAACACTTTC+AGG	+	chr5_1:46281052-46281071	None:intergenic	30.0%
	AAATCATCACAACTTGAGTT+TGG	+	chr5_1:46281217-46281236	None:intergenic	30.0%
	AAAATCGCCGACAAAAATAA+GGG	+	chr5_1:46281421-46281440	None:intergenic	30.0%
	GTGCAATGATTTCATGAAAT+TGG	-	chr5_1:46281448-46281467	Msa0733200:CDS	30.0%
!	GTAAAGTTGTTCTAGCTATA+AGG	-	chr5_1:46281599-46281618	Msa0733200:CDS	30.0%
	CTAGCTATAAGGAAATTTGA+AGG	-	chr5_1:46281610-46281629	Msa0733200:CDS	30.0%
!	ACTCAATTAATTTGGAACAG+AGG	+	chr5_1:46282041-46282060	None:intergenic	30.0%
	GGCAAATGACTCAATTAATT+TGG	+	chr5_1:46282049-46282068	None:intergenic	30.0%
	TTTAAGTACTCGTCAAGTAT+TGG	-	chr5_1:46282117-46282136	Msa0733200:intron	30.0%
!	TTGAAATGGGTCAGATATTT+TGG	-	chr5_1:46282253-46282272	Msa0733200:intron	30.0%
!	GTACCATAAGCTTACATTTT+AGG	+	chr5_1:46282676-46282695	None:intergenic	30.0%
	TTAAGGTTGTGTCTTACTTA+TGG	+	chr5_1:46282700-46282719	None:intergenic	30.0%
!	CCTGGACTGTAAAAATTTTA+AGG	+	chr5_1:46282717-46282736	None:intergenic	30.0%
!	CCTTAAAATTTTTACAGTCC+AGG	-	chr5_1:46282714-46282733	Msa0733200:CDS	30.0%
	TAGATGTTTGTCACTAAAAG+TGG	-	chr5_1:46282864-46282883	Msa0733200:intron	30.0%
	GTAGTTCAGCTAATAACTAA+GGG	+	chr5_1:46282980-46282999	None:intergenic	30.0%
	AGTAGTTCAGCTAATAACTA+AGG	+	chr5_1:46282981-46283000	None:intergenic	30.0%
	ATGTAGGAAAGTCTATGATA+TGG	+	chr5_1:46283116-46283135	None:intergenic	30.0%
	TAAGAAAATGAAAAACCGCT+TGG	+	chr5_1:46283299-46283318	None:intergenic	30.0%
	TTAAGTTAATTGTTTCCCAC+AGG	-	chr5_1:46283413-46283432	Msa0733200:intron	30.0%
	CCATGAATGATTATCAACAA+TGG	+	chr5_1:46283476-46283495	None:intergenic	30.0%
!!	CCATTGTTGATAATCATTCA+TGG	-	chr5_1:46283473-46283492	Msa0733200:intron	30.0%
	AATCATTCATGGAGAAAGTA+TGG	-	chr5_1:46283484-46283503	Msa0733200:intron	30.0%
!	ATCATTCATGGAGAAAGTAT+GGG	-	chr5_1:46283485-46283504	Msa0733200:intron	30.0%
	TTAAACTGACATTTGTAGCA+AGG	-	chr5_1:46283606-46283625	Msa0733200:intron	30.0%
	TAAACTGACATTTGTAGCAA+GGG	-	chr5_1:46283607-46283626	Msa0733200:intron	30.0%
!	TTTTGAATGATCACTTGCAT+AGG	+	chr5_1:46283662-46283681	None:intergenic	30.0%
	TGTCCTAAGTATTTGGATTA+GGG	+	chr5_1:46284144-46284163	None:intergenic	30.0%
	TTGTCCTAAGTATTTGGATT+AGG	+	chr5_1:46284145-46284164	None:intergenic	30.0%
	TTAGCCAAAAACAATTTCCA+AGG	-	chr5_1:46284229-46284248	Msa0733200:intron	30.0%
	AATTCAGTTTGGTCAAACTA+GGG	+	chr5_1:46284342-46284361	None:intergenic	30.0%
	AAATTCAGTTTGGTCAAACT+AGG	+	chr5_1:46284343-46284362	None:intergenic	30.0%
!	TTTGACCAAACTGAATTTTG+TGG	-	chr5_1:46284345-46284364	Msa0733200:intron	30.0%
	TCAATAAACTGAACTAGACA+TGG	-	chr5_1:46284423-46284442	Msa0733200:intron	30.0%
	TGTTCACATAAAGATGATCA+AGG	-	chr5_1:46284503-46284522	Msa0733200:intron	30.0%
	TATGTAGTTTGATACATGTC+AGG	+	chr5_1:46284569-46284588	None:intergenic	30.0%
!!	TCATTAGAAGTACTTGCTTT+AGG	+	chr5_1:46284620-46284639	None:intergenic	30.0%
	TAAAGCAAGTACTTCTAATG+AGG	-	chr5_1:46284619-46284638	Msa0733200:intron	30.0%
!!!	TCTTGTTTTATAGTTAGGCT+TGG	+	chr5_1:46284686-46284705	None:intergenic	30.0%
	TCACATTCCATAACATTACT+CGG	+	chr5_1:46284728-46284747	None:intergenic	30.0%
!	AAAATCTAGCACTGGAATTT+GGG	-	chr5_1:46284777-46284796	Msa0733200:intron	30.0%
!!	CTTTTGACTATCAATTCTCA+TGG	-	chr5_1:46284970-46284989	Msa0733200:CDS	30.0%
	TTGCTTGATGTTATTAGCAA+AGG	-	chr5_1:46285063-46285082	Msa0733200:CDS	30.0%
	TGCTTGATGTTATTAGCAAA+GGG	-	chr5_1:46285064-46285083	Msa0733200:CDS	30.0%
!!	TGTTGCTTTGGTAAATCTTT+AGG	-	chr5_1:46285186-46285205	Msa0733200:five_prime_UTR	30.0%
!	GTTGCTTTGGTAAATCTTTA+GGG	-	chr5_1:46285187-46285206	Msa0733200:five_prime_UTR	30.0%
	TTGCTTTGGTAAATCTTTAG+GGG	-	chr5_1:46285188-46285207	Msa0733200:five_prime_UTR	30.0%
	CTGAAGAAGAATCTTGAGTT+TGG	+	chr5_1:46281113-46281132	None:intergenic	35.0%
	CAAAATCGCCGACAAAAATA+AGG	+	chr5_1:46281422-46281441	None:intergenic	35.0%
!!!	CTTATTTTTGTCGGCGATTT+TGG	-	chr5_1:46281420-46281439	Msa0733200:CDS	35.0%
	TCATGAAATTGGGAACTGTA+CGG	-	chr5_1:46281459-46281478	Msa0733200:CDS	35.0%
	TTCCTTTAGACTTATCAAGC+TGG	-	chr5_1:46282000-46282019	Msa0733200:intron	35.0%
	AAGGATGACTTATTATGGGA+TGG	-	chr5_1:46282294-46282313	Msa0733200:intron	35.0%
	AGCAAACTAGCAGACTATTA+CGG	-	chr5_1:46282627-46282646	Msa0733200:intron	35.0%
!	TTACGGGCTTTCTAAAAGTT+AGG	-	chr5_1:46282644-46282663	Msa0733200:intron	35.0%
!	AATTTTTACAGTCCAGGCTT+AGG	-	chr5_1:46282720-46282739	Msa0733200:CDS	35.0%
	ATAACTAAGGGTGAGAATCA+TGG	+	chr5_1:46282968-46282987	None:intergenic	35.0%
	AGAGTAAAGGAGCAATAAAG+AGG	+	chr5_1:46283073-46283092	None:intergenic	35.0%
	AATCTGATTGTATGTGGTTC+AGG	-	chr5_1:46283144-46283163	Msa0733200:intron	35.0%
	GACTAAGAGTAAACACGAAA+GGG	+	chr5_1:46283170-46283189	None:intergenic	35.0%
	ATGAGTGTTTCAAATCCAAG+CGG	-	chr5_1:46283281-46283300	Msa0733200:intron	35.0%
!	AACAATGGTTTGGGAAACTA+TGG	+	chr5_1:46283461-46283480	None:intergenic	35.0%
!!	ACATGATTGGTTCTGTTACT+AGG	+	chr5_1:46283636-46283655	None:intergenic	35.0%
	ATTTGGGAAATGCTAACAAG+TGG	+	chr5_1:46283740-46283759	None:intergenic	35.0%
	CAAAATTACACCAAACGAGT+TGG	-	chr5_1:46283777-46283796	Msa0733200:intron	35.0%
!!	ACCAAACGAGTTGGTTTAAT+CGG	-	chr5_1:46283786-46283805	Msa0733200:intron	35.0%
	CAATTTAGATGAGGTTTGAG+TGG	+	chr5_1:46284288-46284307	None:intergenic	35.0%
!	TTTTGTGGGCAATTTAGATG+AGG	+	chr5_1:46284297-46284316	None:intergenic	35.0%
	GTTATTGACAGTTTGGCAAT+CGG	+	chr5_1:46284320-46284339	None:intergenic	35.0%
	AACTAGGGTTATTGACAGTT+TGG	+	chr5_1:46284327-46284346	None:intergenic	35.0%
	ACTGACCACAAAATTCAGTT+TGG	+	chr5_1:46284353-46284372	None:intergenic	35.0%
	AGAAACTCCGAGTAATGTTA+TGG	-	chr5_1:46284718-46284737	Msa0733200:intron	35.0%
	AGTGTTTCAAAATCTAGCAC+TGG	-	chr5_1:46284769-46284788	Msa0733200:intron	35.0%
!	CAAAATCTAGCACTGGAATT+TGG	-	chr5_1:46284776-46284795	Msa0733200:intron	35.0%
!	AAATCTAGCACTGGAATTTG+GGG	-	chr5_1:46284778-46284797	Msa0733200:intron	35.0%
!	TCTCCAAATTCTGAAAACGA+AGG	-	chr5_1:46285006-46285025	Msa0733200:CDS	35.0%
	CTGCTTCTGTTAACAATGAT+TGG	-	chr5_1:46285112-46285131	Msa0733200:CDS	35.0%
	ATAGGAATCGAAAAAAGGAG+AGG	-	chr5_1:46285259-46285278	Msa0733200:five_prime_UTR	35.0%
	GAAGAGGTTGCTACAAAAGA+AGG	-	chr5_1:46281290-46281309	Msa0733200:three_prime_UTR	40.0%
	GTGAGTCAAAGCAAAGACAA+CGG	-	chr5_1:46281779-46281798	Msa0733200:intron	40.0%
	AGCCAGCTTGATAAGTCTAA+AGG	+	chr5_1:46282005-46282024	None:intergenic	40.0%
	GCAAACTAGCAGACTATTAC+GGG	-	chr5_1:46282628-46282647	Msa0733200:intron	40.0%
	TCCAGGCTTAGGAAAAAGTA+TGG	-	chr5_1:46282731-46282750	Msa0733200:CDS	40.0%
!!!	TCCATACTTTTTCCTAAGCC+TGG	+	chr5_1:46282735-46282754	None:intergenic	40.0%
	GTGTTGTCGAACAAGAAAGT+TGG	+	chr5_1:46283007-46283026	None:intergenic	40.0%
	AGGCTATCGCTATAGAGTAA+AGG	+	chr5_1:46283086-46283105	None:intergenic	40.0%
	TTACTCTATAGCGATAGCCT+AGG	-	chr5_1:46283086-46283105	Msa0733200:intron	40.0%
	TACTCTATAGCGATAGCCTA+GGG	-	chr5_1:46283087-46283106	Msa0733200:intron	40.0%
	GGACTAAGAGTAAACACGAA+AGG	+	chr5_1:46283171-46283190	None:intergenic	40.0%
	GTATGGGCAGAAGAAAATCA+TGG	-	chr5_1:46283501-46283520	Msa0733200:intron	40.0%
	CTTGCATAGGCTTACATGAT+TGG	+	chr5_1:46283649-46283668	None:intergenic	40.0%
!	GCGGGTTAAGGAATCAAATA+TGG	+	chr5_1:46283713-46283732	None:intergenic	40.0%
	ACCGATTAAACCAACTCGTT+TGG	+	chr5_1:46283790-46283809	None:intergenic	40.0%
!!	AAACGAGTTGGTTTAATCGG+TGG	-	chr5_1:46283789-46283808	Msa0733200:intron	40.0%
!	CCTAAGTATTTGGATTAGGG+AGG	+	chr5_1:46284141-46284160	None:intergenic	40.0%
	CCTCCCTAATCCAAATACTT+AGG	-	chr5_1:46284138-46284157	Msa0733200:intron	40.0%
!!	AGTTTGGCAATCGGTTTTGT+GGG	+	chr5_1:46284311-46284330	None:intergenic	40.0%
!	ATGTGTCTTTTGCACCTGTT+TGG	+	chr5_1:46284540-46284559	None:intergenic	40.0%
!!	AGAAGTACTTGCTTTAGGAG+TGG	+	chr5_1:46284615-46284634	None:intergenic	40.0%
!!	ATAGTTAGGCTTGGTGTTGT+TGG	+	chr5_1:46284677-46284696	None:intergenic	40.0%
!	GCACCTTCGTTTTCAGAATT+TGG	+	chr5_1:46285012-46285031	None:intergenic	40.0%
!	AAGGTGCTTAAACGCAAATG+TGG	-	chr5_1:46285025-46285044	Msa0733200:CDS	40.0%
	CAATGATTGGAAGAATTGGG+TGG	-	chr5_1:46285125-46285144	Msa0733200:CDS	40.0%
!	AAGGAGGATGTATGTTGCTT+TGG	-	chr5_1:46285174-46285193	Msa0733200:five_prime_UTR	40.0%
	GCTGGATAGGAATCGAAAAA+AGG	-	chr5_1:46285254-46285273	Msa0733200:five_prime_UTR	40.0%
	GAGGTAAGAGGAGAGAAGAT+GGG	+	chr5_1:46280936-46280955	None:intergenic	45.0%
	TGAGGTAAGAGGAGAGAAGA+TGG	+	chr5_1:46280937-46280956	None:intergenic	45.0%
!	TGGGTGATGTTTGAGGTAAG+AGG	+	chr5_1:46280948-46280967	None:intergenic	45.0%
	TAGTAGGTGGGTGATGTTTG+AGG	+	chr5_1:46280955-46280974	None:intergenic	45.0%
	CTTCAGAACGAGAATCCCTA+TGG	-	chr5_1:46281127-46281146	Msa0733200:three_prime_UTR	45.0%
	GCAAGATGATCAGCTCCATA+GGG	+	chr5_1:46281145-46281164	None:intergenic	45.0%
	AGCAAGATGATCAGCTCCAT+AGG	+	chr5_1:46281146-46281165	None:intergenic	45.0%
	TGTGCTGAGATCTTTCACTG+AGG	-	chr5_1:46281171-46281190	Msa0733200:three_prime_UTR	45.0%
	ACTAGGAAGAAGGGAAGAAG+AGG	-	chr5_1:46281274-46281293	Msa0733200:three_prime_UTR	45.0%
!!	GTACGGACAGATTTGGTTTG+AGG	-	chr5_1:46281484-46281503	Msa0733200:CDS	45.0%
!!	CAGATTTGGTTTGAGGCGTA+CGG	-	chr5_1:46281491-46281510	Msa0733200:CDS	45.0%
!!	GTACGGACAGATTTGGTTTG+AGG	-	chr5_1:46281484-46281503	Msa0733200:CDS	45.0%
	ACATAGCCTCAGAATAGTCG+AGG	-	chr5_1:46282938-46282957	Msa0733200:intron	45.0%
	GTCTATGATATGGAAGCCCT+AGG	+	chr5_1:46283106-46283125	None:intergenic	45.0%
	TCATGGATTCAGAATTCCCC+AGG	-	chr5_1:46283518-46283537	Msa0733200:intron	45.0%
	ACTGACATTTGTAGCAAGGG+AGG	-	chr5_1:46283610-46283629	Msa0733200:intron	45.0%
	TGGGAAATGCTAACAAGTGG+AGG	+	chr5_1:46283737-46283756	None:intergenic	45.0%
	TGAGGTTTGAGTGGAAGAAG+AGG	+	chr5_1:46284279-46284298	None:intergenic	45.0%
!!	CAGTTTGGCAATCGGTTTTG+TGG	+	chr5_1:46284312-46284331	None:intergenic	45.0%
	TACCTCACAGGAGTTACTTC+AGG	-	chr5_1:46284480-46284499	Msa0733200:intron	45.0%
!	TGGTAACGCATATGTGGTCA+AGG	-	chr5_1:46285155-46285174	Msa0733200:five_prime_UTR	45.0%
	TAACGCATATGTGGTCAAGG+AGG	-	chr5_1:46285158-46285177	Msa0733200:five_prime_UTR	45.0%
!!	CAAATTCAGGGTATTGTCGC+TGG	-	chr5_1:46285236-46285255	Msa0733200:five_prime_UTR	45.0%
	GGAATCGAAAAAAGGAGAGG+TGG	-	chr5_1:46285262-46285281	Msa0733200:five_prime_UTR	45.0%
	ATCGAAAAAAGGAGAGGTGG+AGG	-	chr5_1:46285265-46285284	Msa0733200:five_prime_UTR	45.0%
	TTGGGAACTGTACGGACGTA+CGG	-	chr5_1:46281467-46281486	Msa0733200:CDS	50.0%
	TACGGACGTACGGACAGATT+TGG	-	chr5_1:46281477-46281496	Msa0733200:CDS	50.0%
	TTGAGGCGTACGGACAGATT+TGG	-	chr5_1:46281501-46281520	Msa0733200:CDS	50.0%
	AGCCTCAGAATAGTCGAGGA+CGG	-	chr5_1:46282942-46282961	Msa0733200:intron	50.0%
!	GGAAGAGTGCAGCTGAGATA+TGG	-	chr5_1:46283434-46283453	Msa0733200:intron	50.0%
	AATGCTAACAAGTGGAGGCG+CGG	+	chr5_1:46283732-46283751	None:intergenic	50.0%
	GGTTTGAGTGGAAGAAGAGG+TGG	+	chr5_1:46284276-46284295	None:intergenic	50.0%
	CACCTGAAGTAACTCCTGTG+AGG	+	chr5_1:46284485-46284504	None:intergenic	50.0%
	AGGTTGCTCAGCAACCAAAC+AGG	-	chr5_1:46284523-46284542	Msa0733200:intron	50.0%
!!	AAGAATTGGGTGGTGCTGCA+TGG	-	chr5_1:46285135-46285154	Msa0733200:exon	50.0%
!	GCTGCATGGTAACGCATATG+TGG	-	chr5_1:46285149-46285168	Msa0733200:exon	50.0%
!!	TCAGGGTATTGTCGCTGGAT+AGG	-	chr5_1:46285241-46285260	Msa0733200:five_prime_UTR	50.0%
	GAAAAAAGGAGAGGTGGAGG+AGG	-	chr5_1:46285268-46285287	Msa0733200:five_prime_UTR	50.0%
	GGTAAGGAAGGGGACACAAT+AGG	-	chr5_1:46285289-46285308	Msa0733200:five_prime_UTR	50.0%
	AAGGGGACACAATAGGTGTG+TGG	-	chr5_1:46285296-46285315	Msa0733200:five_prime_UTR	50.0%
	CTCAGCTGCACTCTTCCTGT+GGG	+	chr5_1:46283431-46283450	None:intergenic	55.0%
	TCTCAGCTGCACTCTTCCTG+TGG	+	chr5_1:46283432-46283451	None:intergenic	55.0%
!	ATGCTAACAAGTGGAGGCGC+GGG	+	chr5_1:46283731-46283750	None:intergenic	55.0%
	TAGGAGTGGCGTTGCATGTG+TGG	+	chr5_1:46284601-46284620	None:intergenic	55.0%
	AAGGAGAGGTGGAGGAGGTA+AGG	-	chr5_1:46285273-46285292	Msa0733200:five_prime_UTR	55.0%
	AGAGGTGGAGGAGGTAAGGA+AGG	-	chr5_1:46285277-46285296	Msa0733200:five_prime_UTR	55.0%
	GAGGTGGAGGAGGTAAGGAA+GGG	-	chr5_1:46285278-46285297	Msa0733200:five_prime_UTR	55.0%
	AGGTGGAGGAGGTAAGGAAG+GGG	-	chr5_1:46285279-46285298	Msa0733200:five_prime_UTR	55.0%
	GGCCGTCCTCGACTATTCTG+AGG	+	chr5_1:46282947-46282966	None:intergenic	60.0%
!	ACAAGTGGAGGCGCGGGTTA+AGG	+	chr5_1:46283725-46283744	None:intergenic	60.0%

Chromosome	Type	Strat	End	Strand	Name
chr5_1	gene	46280865	46285321	46280865	ID=Msa0733200;Name=Msa0733200
chr5_1	mRNA	46280865	46285321	46280865	ID=Msa0733200-mRNA-1;Parent=Msa0733200;Name=Msa0733200-mRNA-1;_AED=0.01;_eAED=0.01;_QI=169\|1\|1\|1\|1\|1\|3\|492\|240
chr5_1	exon	46280865	46281696	46280865	ID=Msa0733200-mRNA-1:exon:13202;Parent=Msa0733200-mRNA-1
chr5_1	exon	46282647	46282751	46282647	ID=Msa0733200-mRNA-1:exon:13201;Parent=Msa0733200-mRNA-1
chr5_1	exon	46284875	46285321	46284875	ID=Msa0733200-mRNA-1:exon:13200;Parent=Msa0733200-mRNA-1
chr5_1	five_prime_UTR	46285153	46285321	46285153	ID=Msa0733200-mRNA-1:five_prime_utr;Parent=Msa0733200-mRNA-1
chr5_1	CDS	46284875	46285152	46284875	ID=Msa0733200-mRNA-1:cds;Parent=Msa0733200-mRNA-1
chr5_1	CDS	46282647	46282751	46282647	ID=Msa0733200-mRNA-1:cds;Parent=Msa0733200-mRNA-1
chr5_1	CDS	46281357	46281696	46281357	ID=Msa0733200-mRNA-1:cds;Parent=Msa0733200-mRNA-1
chr5_1	three_prime_UTR	46280865	46281356	46280865	ID=Msa0733200-mRNA-1:three_prime_utr;Parent=Msa0733200-mRNA-1

Gene Sequence

>Msa0733200

ATGGATAATAATATCCCTGAAAGTGTTAGAAAGAAAGTGATAATCAAAGAACTTGTTAAGGGTCAAGAAGCTGCAACCAAACTCAAGATTCTTCTTCAGAACGAGAATCCCTATGGAGCTGATCATCTTGCTGCAAATGTGCTGAGATCTTTCACTGAGGCTCTTTCTATTATCTCTCAACCAAACTCAAGTTGTGATGATTTTCTGAATCTGATTAAATCTGCAGATTCAATTAATGAAACTAGGAAGAAGGGAAGAAGAGGTTGCTACAAAAGAAGGAAGAGTGCAGCTGAGATATGGACCATAGTTTCCCAAACCATTGTTGATAATCATTCATGGAGAAAGTATGGGCAGAAGAAAATCATGGATTCAGAATTCCCCAGGAGTTACTTCAGGTGTTCACATAAAGATGATCAAGGTTGCTCAGCAACCAAACAGGTGCAAAAGACACATGACAATCCTGACATGTATCAAACTACATACATTGGCATCCACACATGCAACGCCACTCCTAAAGCAAGTACTTCTAATGAGGCAATATTTGTGAATTCTGATGCTGAAGTAACACCAACAACACCAAGCCTAACTATAAAACAAGAATATCTCAAAGAAGAAACTCCGAGTAATGTTATGGAATGTGATGATAATGCAGATGATATGCTAGTGTTTCAAAATCTAGCACTGGAATTTGGGGACATTGAATTCAACTTTGATGAAAATTAA

Protein sequence

>Msa0733200

MDNNIPESVRKKVIIKELVKGQEAATKLKILLQNENPYGADHLAANVLRSFTEALSIISQPNSSCDDFLNLIKSADSINETRKKGRRGCYKRRKSAAEIWTIVSQTIVDNHSWRKYGQKKIMDSEFPRSYFRCSHKDDQGCSATKQVQKTHDNPDMYQTTYIGIHTCNATPKASTSNEAIFVNSDAEVTPTTPSLTIKQEYLKEETPSNVMECDDNADDMLVFQNLALEFGDIEFNFDEN*