Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0738950 | XP_003616828.1 | 98.684 | 304 | 4 | 0 | 1 | 304 | 1 | 304 | 0.0 | 626 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0738950 | sp|Q8L633|RNZ2_ARATH | 67.550 | 302 | 87 | 3 | 13 | 304 | 1 | 301 | 3.22e-153 | 436 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0738950 | G7K7F6 | 98.684 | 304 | 4 | 0 | 1 | 304 | 1 | 304 | 0.0 | 626 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0081790 | Msa0738950 | 0.809917 | 1.492568e-50 | -8.615850e-47 |
| Msa0610300 | Msa0738950 | 0.803385 | 3.574966e-49 | -8.615850e-47 |
| Msa0624700 | Msa0738950 | 0.846748 | 1.787706e-59 | -8.615850e-47 |
| Msa0684520 | Msa0738950 | 0.823924 | 1.065960e-53 | -8.615850e-47 |
| Msa0685890 | Msa0738950 | 0.802793 | 4.738595e-49 | -8.615850e-47 |
| Msa0738950 | Msa0819440 | 0.800818 | 1.205456e-48 | -8.615850e-47 |
| Msa0738950 | Msa0879820 | 0.800426 | 1.449291e-48 | -8.615850e-47 |
| Msa0738950 | Msa0915550 | 0.817392 | 3.377893e-52 | -8.615850e-47 |
| Msa0738950 | Msa1040390 | 0.811995 | 5.296861e-51 | -8.615850e-47 |
| Msa0738950 | Msa1075420 | 0.822701 | 2.057417e-53 | -8.615850e-47 |
| Msa0738950 | Msa1083140 | 0.810533 | 1.099346e-50 | -8.615850e-47 |
| Msa0738950 | Msa1163050 | 0.801415 | 9.103230e-49 | -8.615850e-47 |
| Msa0738950 | Msa1177960 | 0.810803 | 9.609950e-51 | -8.615850e-47 |
| Msa0738950 | Msa1202170 | 0.832695 | 8.161473e-56 | -8.615850e-47 |
| Msa0738950 | Msa1237750 | 0.810257 | 1.260857e-50 | -8.615850e-47 |
| Msa0738950 | Msa1272200 | 0.800639 | 1.311513e-48 | -8.615850e-47 |
| Msa0738950 | Msa1294940 | 0.820664 | 6.087686e-53 | -8.615850e-47 |
| Msa0738950 | Msa1375600 | 0.805549 | 1.265263e-49 | -8.615850e-47 |
| Msa0738950 | Msa1388610 | 0.806787 | 6.941211e-50 | -8.615850e-47 |
| Msa0128110 | Msa0738950 | 0.802007 | 6.880220e-49 | -8.615850e-47 |
| Msa0199490 | Msa0738950 | 0.805826 | 1.106841e-49 | -8.615850e-47 |
| Msa0256590 | Msa0738950 | 0.800165 | 1.638136e-48 | -8.615850e-47 |
| Msa0273550 | Msa0738950 | 0.821496 | 3.914708e-53 | -8.615850e-47 |
| Msa0319340 | Msa0738950 | 0.823805 | 1.136300e-53 | -8.615850e-47 |
| Msa0329910 | Msa0738950 | 0.844383 | 7.821716e-59 | -8.615850e-47 |
| Msa0515730 | Msa0738950 | 0.844746 | 6.244553e-59 | -8.615850e-47 |
| Msa0548710 | Msa0738950 | 0.800132 | 1.663450e-48 | -8.615850e-47 |
| Msa0576480 | Msa0738950 | 0.806890 | 6.602183e-50 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0738950 | MtrunA17_Chr5g0438591 | 98.684 | 304 | 4 | 0 | 1 | 304 | 1 | 304 | 0.0 | 626 |
| Msa0738950 | MtrunA17_Chr5g0444931 | 57.500 | 240 | 102 | 0 | 65 | 304 | 36 | 275 | 1.82e-107 | 315 |
| Msa0738950 | MtrunA17_Chr1g0162061 | 51.971 | 279 | 120 | 1 | 26 | 304 | 23 | 287 | 2.24e-106 | 313 |
| Msa0738950 | MtrunA17_Chr5g0444941 | 53.226 | 62 | 29 | 0 | 71 | 132 | 17 | 78 | 1.93e-19 | 82.4 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0738950 | AT2G04530.1 | 67.550 | 302 | 87 | 3 | 13 | 304 | 1 | 301 | 3.28e-154 | 436 |
| Msa0738950 | AT1G74700.1 | 62.338 | 231 | 87 | 0 | 75 | 305 | 3 | 233 | 2.23e-109 | 319 |
Find 91 sgRNAs with CRISPR-Local
Find 234 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ATAAATAACCTGACCCTTTA+AGG | 0.057296 | 5_1:-57007542 | None:intergenic |
| TTCCCAACCAATTCCCTTAA+AGG | 0.164975 | 5_1:+57007528 | Msa0738950:CDS |
| GTCATGTTACCTCAGATATA+TGG | 0.222694 | 5_1:-57011075 | None:intergenic |
| ACCTGACCCTTTAAGGGAAT+TGG | 0.278725 | 5_1:-57007535 | None:intergenic |
| TCTCAATTTGTTTCCCGTTC+AGG | 0.297798 | 5_1:-57010402 | None:intergenic |
| TCAACGAAAAGGTTTGGATT+TGG | 0.332275 | 5_1:+57007623 | Msa0738950:CDS |
| ACAGGTTCAACGAAAAGGTT+TGG | 0.355923 | 5_1:+57007617 | Msa0738950:CDS |
| TTGAAGGTGGGGTTTGTGAG+AGG | 0.361663 | 5_1:-57007447 | None:intergenic |
| TCTCCTGAGGTAGCCTTCAC+TGG | 0.374275 | 5_1:+57010537 | Msa0738950:CDS |
| GGGAAGGAAAGTTGTTGTTT+TGG | 0.377652 | 5_1:-57007510 | None:intergenic |
| TCCCAACCAATTCCCTTAAA+GGG | 0.382940 | 5_1:+57007529 | Msa0738950:CDS |
| AAATTGTGAATTGGTTGCTT+TGG | 0.386759 | 5_1:+57009544 | Msa0738950:CDS |
| CTCAATGCATCGGCATTAAG+TGG | 0.394913 | 5_1:-57010588 | None:intergenic |
| TGATGGTTGTGTTGTGTTGT+GGG | 0.403553 | 5_1:-57007310 | None:intergenic |
| TGAAGGTGGGGTTTGTGAGA+GGG | 0.404642 | 5_1:-57007446 | None:intergenic |
| AACAATACAGTCACCTGAAC+GGG | 0.409727 | 5_1:+57010389 | Msa0738950:CDS |
| GAAGGAATTGTGTGGTGAAA+TGG | 0.411249 | 5_1:-57007486 | None:intergenic |
| ACCAATTCCCTTAAAGGGTC+AGG | 0.420173 | 5_1:+57007534 | Msa0738950:CDS |
| AGTTGAACTAAATTGTGAAT+TGG | 0.422079 | 5_1:+57009535 | Msa0738950:CDS |
| TTGGAAGGATATTCAATTGA+AGG | 0.423791 | 5_1:+57007642 | Msa0738950:CDS |
| TAAATAACCTGACCCTTTAA+GGG | 0.426332 | 5_1:-57007541 | None:intergenic |
| GTTATATAGTCTACTCAATC+AGG | 0.431968 | 5_1:+57010353 | Msa0738950:CDS |
| ACCCTTTAAGGGAATTGGTT+GGG | 0.439158 | 5_1:-57007530 | None:intergenic |
| TTTGCATTTGTGTGGTGAAA+TGG | 0.439941 | 5_1:-57007422 | None:intergenic |
| GGAGGGCTGCCAATGTATAT+AGG | 0.451399 | 5_1:+57009410 | Msa0738950:CDS |
| ATTGAAGGAGTTTCGATTGG+TGG | 0.453548 | 5_1:+57007657 | Msa0738950:CDS |
| CTCCTGAGGTAGCCTTCACT+GGG | 0.453856 | 5_1:+57010538 | Msa0738950:CDS |
| AAGGAATTGTGTGGTGAAAT+GGG | 0.472269 | 5_1:-57007485 | None:intergenic |
| ATGAAGGAAAGGGTTTAGAG+TGG | 0.475692 | 5_1:-57007367 | None:intergenic |
| TGGTGAAATGGGAAAATTTG+TGG | 0.481992 | 5_1:-57007474 | None:intergenic |
| CTTGACGTTCACAAGACATT+GGG | 0.483347 | 5_1:+57009509 | Msa0738950:CDS |
| TCATGTTACCTCAGATATAT+GGG | 0.483425 | 5_1:-57011074 | None:intergenic |
| AAATCACAGGTTCAACGAAA+AGG | 0.484528 | 5_1:+57007612 | Msa0738950:CDS |
| TCAAATATTGATACCTGGCT+TGG | 0.488765 | 5_1:-57009708 | None:intergenic |
| TGAAGGAAAGGGTTTAGAGT+GGG | 0.495530 | 5_1:-57007366 | None:intergenic |
| ATGATGGTTGTGTTGTGTTG+TGG | 0.496855 | 5_1:-57007311 | None:intergenic |
| ATTTGAGAGGATGAAGGAAA+GGG | 0.498326 | 5_1:-57007377 | None:intergenic |
| TCAACATCGTCTTTGATGCA+TGG | 0.500196 | 5_1:-57009479 | None:intergenic |
| CGAAAAGGTTTGGATTTGGA+AGG | 0.504396 | 5_1:+57007627 | Msa0738950:CDS |
| CAGGGGAGACATATGAAATA+CGG | 0.510868 | 5_1:+57009643 | Msa0738950:intron |
| CCATGGATTTGAGAGGATGA+AGG | 0.512941 | 5_1:-57007383 | None:intergenic |
| CACTTGAGTAAAACGAGGAA+GGG | 0.522115 | 5_1:-57011175 | None:intergenic |
| CTACTGTGGTTGAATCATCT+AGG | 0.522327 | 5_1:-57011027 | None:intergenic |
| TCAATTGAAGGAGTTTCGAT+TGG | 0.523162 | 5_1:+57007654 | Msa0738950:CDS |
| CCTTCATCCTCTCAAATCCA+TGG | 0.528672 | 5_1:+57007383 | Msa0738950:exon |
| GACCCTTTAAGGGAATTGGT+TGG | 0.528725 | 5_1:-57007531 | None:intergenic |
| TTTAAGGGAATTGGTTGGGA+AGG | 0.538111 | 5_1:-57007526 | None:intergenic |
| GATGGTTGTGTTGTGTTGTG+GGG | 0.539994 | 5_1:-57007309 | None:intergenic |
| GCTTGACGTTCACAAGACAT+TGG | 0.542921 | 5_1:+57009508 | Msa0738950:CDS |
| TCCCCAGTGAAGGCTACCTC+AGG | 0.543025 | 5_1:-57010540 | None:intergenic |
| GAATTGGTTGCTTTGGATGT+CGG | 0.545527 | 5_1:+57009551 | Msa0738950:CDS |
| GATTTGAGAGGATGAAGGAA+AGG | 0.550538 | 5_1:-57007378 | None:intergenic |
| ATTCTGATGAATAGCTCTAG+TGG | 0.559629 | 5_1:-57007739 | None:intergenic |
| CAACTTTGTAGACAAAATCA+AGG | 0.560478 | 5_1:+57011117 | Msa0738950:three_prime_UTR |
| GGTGAAATGGGAAAATTTGT+GGG | 0.563235 | 5_1:-57007473 | None:intergenic |
| ACAACATGTTATACCAAGCC+AGG | 0.564907 | 5_1:+57009695 | Msa0738950:CDS |
| ATTCACAATTTAGTTCAACT+TGG | 0.565102 | 5_1:-57009532 | None:intergenic |
| TTCTGATGAATAGCTCTAGT+GGG | 0.572017 | 5_1:-57007738 | None:intergenic |
| TCAAAAGCACATTTAAACTC+AGG | 0.574634 | 5_1:-57007702 | None:intergenic |
| GAGAGGGATTTGCATTTGTG+TGG | 0.585139 | 5_1:-57007430 | None:intergenic |
| GATGCATGGAGGTACAAATA+CGG | 0.589618 | 5_1:-57009465 | None:intergenic |
| AGGAAGGGCGTGCATGAGAG+AGG | 0.591105 | 5_1:-57011160 | None:intergenic |
| ATAACATGTTGTGTTCTGAA+TGG | 0.593217 | 5_1:-57009684 | None:intergenic |
| GCGAAGTGGAAGAGTTGCCA+TGG | 0.593878 | 5_1:-57007400 | None:intergenic |
| CCACGACTTCCTATATACAT+TGG | 0.595400 | 5_1:-57009419 | None:intergenic |
| ACACTTGAGTAAAACGAGGA+AGG | 0.596249 | 5_1:-57011176 | None:intergenic |
| AAACAATACAGTCACCTGAA+CGG | 0.618544 | 5_1:+57010388 | Msa0738950:CDS |
| TGATGTTGTATCCCCAGTGA+AGG | 0.625436 | 5_1:-57010550 | None:intergenic |
| GTGACAGTGATGAATGATGA+TGG | 0.625939 | 5_1:-57007327 | None:intergenic |
| GTACCGTGTTGCGAAATCAC+AGG | 0.631323 | 5_1:+57007599 | Msa0738950:CDS |
| CATGGAGGTACAAATACGGT+GGG | 0.631343 | 5_1:-57009461 | None:intergenic |
| GAACCTGTGATTTCGCAACA+CGG | 0.631344 | 5_1:-57007602 | None:intergenic |
| TTCTGAATGGTCGAACAACA+AGG | 0.634897 | 5_1:-57009671 | None:intergenic |
| TCAATGCATCGGCATTAAGT+GGG | 0.635067 | 5_1:-57010587 | None:intergenic |
| GGAGGTACAAATACGGTGGG+AGG | 0.644079 | 5_1:-57009458 | None:intergenic |
| CCAATGTATATAGGAAGTCG+TGG | 0.651899 | 5_1:+57009419 | Msa0738950:CDS |
| GTGAAATGGGAAAATTTGTG+GGG | 0.659190 | 5_1:-57007472 | None:intergenic |
| GCATGGAGGTACAAATACGG+TGG | 0.660563 | 5_1:-57009462 | None:intergenic |
| TGGTCATACCCATATATCTG+AGG | 0.662316 | 5_1:+57011066 | Msa0738950:CDS |
| ATATATGGGTATGACCATGT+TGG | 0.662736 | 5_1:-57011060 | None:intergenic |
| AGCAAAAGTTCTTATAACCG+AGG | 0.665868 | 5_1:+57010611 | Msa0738950:CDS |
| GTAGAGCATGCACGCCAACA+TGG | 0.668020 | 5_1:+57011046 | Msa0738950:CDS |
| AGAGTTGCCATGGATTTGAG+AGG | 0.670139 | 5_1:-57007390 | None:intergenic |
| AGACAAAATCAAGGTGCACG+AGG | 0.673267 | 5_1:+57011126 | Msa0738950:three_prime_UTR |
| TGAAATGGGAAAATTTGTGG+GGG | 0.677462 | 5_1:-57007471 | None:intergenic |
| TTGGCGTGCATGCTCTACTG+TGG | 0.686614 | 5_1:-57011041 | None:intergenic |
| AGACACTATATTATCTCCTG+AGG | 0.717343 | 5_1:+57010524 | Msa0738950:CDS |
| TGTGTGGTGAAATGGCGAAG+TGG | 0.729326 | 5_1:-57007414 | None:intergenic |
| ACATCGTCTTTGATGCATGG+AGG | 0.734178 | 5_1:-57009476 | None:intergenic |
| ATAGACACTTGAGTAAAACG+AGG | 0.767031 | 5_1:-57011180 | None:intergenic |
| TCCTGAGGTAGCCTTCACTG+GGG | 0.776935 | 5_1:+57010539 | Msa0738950:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TCATATATAACTAATATATA+TGG | - | chr5_1:57007986-57008005 | None:intergenic | 10.0% |
| !!! | ATAATTTTTTTAGCATTATT+AGG | + | chr5_1:57008594-57008613 | Msa0738950:intron | 10.0% |
| !!! | TAATTTTTTTAGCATTATTA+GGG | + | chr5_1:57008595-57008614 | Msa0738950:intron | 10.0% |
| !! | AAATTCATAATACATTATTA+TGG | + | chr5_1:57009070-57009089 | Msa0738950:intron | 10.0% |
| !!! | AATTTTTTTAGCATTATTAG+GGG | + | chr5_1:57008596-57008615 | Msa0738950:intron | 15.0% |
| !! | TAGAGAAAAATATCATTTAT+TGG | + | chr5_1:57008880-57008899 | Msa0738950:intron | 15.0% |
| !! | AAAAAAGATTTAACATTGAT+AGG | + | chr5_1:57009145-57009164 | Msa0738950:intron | 15.0% |
| !!! | TTAAATTTAAGTTGTGTATT+TGG | + | chr5_1:57009919-57009938 | Msa0738950:intron | 15.0% |
| !!! | TTTAAATGTGCTTTTGATAT+TGG | + | chr5_1:57007708-57007727 | Msa0738950:CDS | 20.0% |
| !! | AACACAAATGAAAACATTAT+TGG | - | chr5_1:57007832-57007851 | None:intergenic | 20.0% |
| !! | TACATATAATATGTACTAGT+AGG | + | chr5_1:57008359-57008378 | Msa0738950:intron | 20.0% |
| !! | ACATATAATATGTACTAGTA+GGG | + | chr5_1:57008360-57008379 | Msa0738950:intron | 20.0% |
| !! | TGAATATATTTAAGTGAGAT+AGG | + | chr5_1:57008545-57008564 | Msa0738950:intron | 20.0% |
| !!! | AATATGTTTTTGATAAAGCA+GGG | - | chr5_1:57008641-57008660 | None:intergenic | 20.0% |
| !!! | AAATATGTTTTTGATAAAGC+AGG | - | chr5_1:57008642-57008661 | None:intergenic | 20.0% |
| !!! | ATTTTGACTTAGATGAATAA+AGG | + | chr5_1:57008747-57008766 | Msa0738950:intron | 20.0% |
| !!! | ATCTTTTTTCAACTATAAAC+AGG | - | chr5_1:57009134-57009153 | None:intergenic | 20.0% |
| !! | AATTTGAAAACTGAAAAGAA+AGG | - | chr5_1:57009209-57009228 | None:intergenic | 20.0% |
| !!! | ATGATGATTTTGAATGATTT+AGG | + | chr5_1:57009388-57009407 | Msa0738950:intron | 20.0% |
| !!! | TGATGATTTTGAATGATTTA+GGG | + | chr5_1:57009389-57009408 | Msa0738950:intron | 20.0% |
| !!! | ATTTGTCAATTTTCATTTCA+GGG | + | chr5_1:57009625-57009644 | Msa0738950:intron | 20.0% |
| !!! | AACACAATCTTTTAATAGAA+TGG | + | chr5_1:57010637-57010656 | Msa0738950:intron | 20.0% |
| !!! | TTTCTTAACATCTATTTCTA+TGG | - | chr5_1:57010720-57010739 | None:intergenic | 20.0% |
| !! | ATTGTTGAAACTATTATAAC+AGG | + | chr5_1:57010997-57011016 | Msa0738950:intron | 20.0% |
| !!! | TGACGTTTTTCATTATTTTA+TGG | + | chr5_1:57011094-57011113 | Msa0738950:exon | 20.0% |
| !! | TTTCTTATATTTGAGACTAG+AGG | + | chr5_1:57008023-57008042 | Msa0738950:intron | 25.0% |
| !! | TTCTTATATTTGAGACTAGA+GGG | + | chr5_1:57008024-57008043 | Msa0738950:intron | 25.0% |
| !!! | AATAGACTACTATTGTTTTG+TGG | + | chr5_1:57008087-57008106 | Msa0738950:intron | 25.0% |
| !!! | TTCAACAAACTGTTATTTTC+TGG | + | chr5_1:57008189-57008208 | Msa0738950:intron | 25.0% |
| !!! | TCAACAAACTGTTATTTTCT+GGG | + | chr5_1:57008190-57008209 | Msa0738950:intron | 25.0% |
| !!! | ACTAGTAGGGTTTTAAATAA+AGG | + | chr5_1:57008373-57008392 | Msa0738950:intron | 25.0% |
| ! | AGAGTGAAAAAATTAAGTCT+TGG | + | chr5_1:57008667-57008686 | Msa0738950:intron | 25.0% |
| ! | TAATCAACATAGAGATAGTT+TGG | - | chr5_1:57008940-57008959 | None:intergenic | 25.0% |
| ! | TAATACATTATTATGGAGCT+TGG | + | chr5_1:57009077-57009096 | Msa0738950:intron | 25.0% |
| ! | AACATTTACAACAATACACA+TGG | - | chr5_1:57009238-57009257 | None:intergenic | 25.0% |
| !! | ATTCACAATTTAGTTCAACT+TGG | - | chr5_1:57009535-57009554 | None:intergenic | 25.0% |
| ! | AGTTGAACTAAATTGTGAAT+TGG | + | chr5_1:57009535-57009554 | Msa0738950:CDS | 25.0% |
| !! | GATTTGTCAATTTTCATTTC+AGG | + | chr5_1:57009624-57009643 | Msa0738950:intron | 25.0% |
| !! | TTTGTCAATTTTCATTTCAG+GGG | + | chr5_1:57009626-57009645 | Msa0738950:intron | 25.0% |
| ! | TATGTTCAAATATTGATACC+TGG | - | chr5_1:57009716-57009735 | None:intergenic | 25.0% |
| ! | AAAAACAAGCATATGTTTCA+TGG | - | chr5_1:57009889-57009908 | None:intergenic | 25.0% |
| ! | TTCTAATTTATAACCACCAT+AGG | + | chr5_1:57010179-57010198 | Msa0738950:intron | 25.0% |
| ! | ATTGAGAAACTAAAAAAGTC+AGG | + | chr5_1:57010418-57010437 | Msa0738950:CDS | 25.0% |
| !! | GTTTTCTATAACTTCTTACA+TGG | - | chr5_1:57010775-57010794 | None:intergenic | 25.0% |
| ! | GTGAAATGAGAAAAATTTGA+AGG | - | chr5_1:57010800-57010819 | None:intergenic | 25.0% |
| !! | TTTAACATTTTCTCTCAAGT+TGG | + | chr5_1:57010839-57010858 | Msa0738950:intron | 25.0% |
| ! | AAACAATGATAGAAATAGAG+AGG | - | chr5_1:57010967-57010986 | None:intergenic | 25.0% |
| TAAATAACCTGACCCTTTAA+GGG | - | chr5_1:57007544-57007563 | None:intergenic | 30.0% | |
| ATAAATAACCTGACCCTTTA+AGG | - | chr5_1:57007545-57007564 | None:intergenic | 30.0% | |
| TTGGAAGGATATTCAATTGA+AGG | + | chr5_1:57007642-57007661 | Msa0738950:CDS | 30.0% | |
| ! | TCAAAAGCACATTTAAACTC+AGG | - | chr5_1:57007705-57007724 | None:intergenic | 30.0% |
| !! | ACTACTATTGTTTTGTGGTA+TGG | + | chr5_1:57008092-57008111 | Msa0738950:intron | 30.0% |
| !! | TCTATTTGGATTAGTGTGAA+GGG | + | chr5_1:57008325-57008344 | Msa0738950:intron | 30.0% |
| TTTAGCATTATTAGGGGAAA+AGG | + | chr5_1:57008602-57008621 | Msa0738950:intron | 30.0% | |
| TTGACTTAGATGAATAAAGG+AGG | + | chr5_1:57008750-57008769 | Msa0738950:intron | 30.0% | |
| TGACTTAGATGAATAAAGGA+GGG | + | chr5_1:57008751-57008770 | Msa0738950:intron | 30.0% | |
| !! | TAGAGGTTCTGAAGAAATTA+AGG | + | chr5_1:57008821-57008840 | Msa0738950:intron | 30.0% |
| ATACATTGTAGGTCTACTAT+AGG | - | chr5_1:57008987-57009006 | None:intergenic | 30.0% | |
| GTAACTTTCTACTAGAACAA+AGG | + | chr5_1:57009108-57009127 | Msa0738950:intron | 30.0% | |
| TATCATATCATGTACAACTC+AGG | + | chr5_1:57009169-57009188 | Msa0738950:intron | 30.0% | |
| ! | TGATTTTGAATGATTTAGGG+AGG | + | chr5_1:57009392-57009411 | Msa0738950:intron | 30.0% |
| ! | GATTTTGAATGATTTAGGGA+GGG | + | chr5_1:57009393-57009412 | Msa0738950:intron | 30.0% |
| AAATTGTGAATTGGTTGCTT+TGG | + | chr5_1:57009544-57009563 | Msa0738950:CDS | 30.0% | |
| ! | ATAACATGTTGTGTTCTGAA+TGG | - | chr5_1:57009687-57009706 | None:intergenic | 30.0% |
| ! | GCATTTTCAAACAAAGTTCA+TGG | + | chr5_1:57009751-57009770 | Msa0738950:intron | 30.0% |
| ! | AAACGGAAAAGATAGGTTTT+AGG | - | chr5_1:57010047-57010066 | None:intergenic | 30.0% |
| ! | TAAAACCTATCTTTTCCGTT+TGG | + | chr5_1:57010046-57010065 | Msa0738950:intron | 30.0% |
| ! | AAAACCTATCTTTTCCGTTT+GGG | + | chr5_1:57010047-57010066 | Msa0738950:intron | 30.0% |
| CATGAGAAATGGTAAAACTT+TGG | + | chr5_1:57010079-57010098 | Msa0738950:intron | 30.0% | |
| ACAATGGATATGTTGTCAAA+TGG | + | chr5_1:57010140-57010159 | Msa0738950:intron | 30.0% | |
| CAATGGATATGTTGTCAAAT+GGG | + | chr5_1:57010141-57010160 | Msa0738950:intron | 30.0% | |
| GTTATATAGTCTACTCAATC+AGG | + | chr5_1:57010353-57010372 | Msa0738950:CDS | 30.0% | |
| TAAAAGATTGTGTTGTACCT+CGG | - | chr5_1:57010631-57010650 | None:intergenic | 30.0% | |
| !! | CATCTATTTCTATGGATTTC+AGG | - | chr5_1:57010712-57010731 | None:intergenic | 30.0% |
| AGATGTTAAGAAATCAAGCA+TGG | + | chr5_1:57010727-57010746 | Msa0738950:intron | 30.0% | |
| GATGTTAAGAAATCAAGCAT+GGG | + | chr5_1:57010728-57010747 | Msa0738950:intron | 30.0% | |
| ATGTTAAGAAATCAAGCATG+GGG | + | chr5_1:57010729-57010748 | Msa0738950:intron | 30.0% | |
| GATAGAAATAGAGAGGAATA+GGG | - | chr5_1:57010960-57010979 | None:intergenic | 30.0% | |
| TGATAGAAATAGAGAGGAAT+AGG | - | chr5_1:57010961-57010980 | None:intergenic | 30.0% | |
| TCATGTTACCTCAGATATAT+GGG | - | chr5_1:57011077-57011096 | None:intergenic | 30.0% | |
| CAACTTTGTAGACAAAATCA+AGG | + | chr5_1:57011117-57011136 | Msa0738950:three_prime_UTR | 30.0% | |
| ATTTGAGAGGATGAAGGAAA+GGG | - | chr5_1:57007380-57007399 | None:intergenic | 35.0% | |
| TTTGCATTTGTGTGGTGAAA+TGG | - | chr5_1:57007425-57007444 | None:intergenic | 35.0% | |
| TGAAATGGGAAAATTTGTGG+GGG | - | chr5_1:57007474-57007493 | None:intergenic | 35.0% | |
| GTGAAATGGGAAAATTTGTG+GGG | - | chr5_1:57007475-57007494 | None:intergenic | 35.0% | |
| GGTGAAATGGGAAAATTTGT+GGG | - | chr5_1:57007476-57007495 | None:intergenic | 35.0% | |
| TGGTGAAATGGGAAAATTTG+TGG | - | chr5_1:57007477-57007496 | None:intergenic | 35.0% | |
| AAGGAATTGTGTGGTGAAAT+GGG | - | chr5_1:57007488-57007507 | None:intergenic | 35.0% | |
| !!! | GAAAGTTGTTGTTTTGGAGA+AGG | - | chr5_1:57007507-57007526 | None:intergenic | 35.0% |
| AAATCACAGGTTCAACGAAA+AGG | + | chr5_1:57007612-57007631 | Msa0738950:CDS | 35.0% | |
| TCAACGAAAAGGTTTGGATT+TGG | + | chr5_1:57007623-57007642 | Msa0738950:CDS | 35.0% | |
| TCAATTGAAGGAGTTTCGAT+TGG | + | chr5_1:57007654-57007673 | Msa0738950:CDS | 35.0% | |
| !! | TTCTGATGAATAGCTCTAGT+GGG | - | chr5_1:57007741-57007760 | None:intergenic | 35.0% |
| !! | ATTCTGATGAATAGCTCTAG+TGG | - | chr5_1:57007742-57007761 | None:intergenic | 35.0% |
| AGTATTCCCTGTTGTCAAAT+AGG | + | chr5_1:57008047-57008066 | Msa0738950:intron | 35.0% | |
| GTATTCCCTGTTGTCAAATA+GGG | + | chr5_1:57008048-57008067 | Msa0738950:intron | 35.0% | |
| ! | TGCCAAAGTTGTACTGTTTT+TGG | + | chr5_1:57008273-57008292 | Msa0738950:intron | 35.0% |
| CACCAAAAACAGTACAACTT+TGG | - | chr5_1:57008278-57008297 | None:intergenic | 35.0% | |
| !! | GTCTATTTGGATTAGTGTGA+AGG | + | chr5_1:57008324-57008343 | Msa0738950:intron | 35.0% |
| !! | CTATTTGGATTAGTGTGAAG+GGG | + | chr5_1:57008326-57008345 | Msa0738950:intron | 35.0% |
| CTTAATACTATGGAGAATCG+TGG | - | chr5_1:57008474-57008493 | None:intergenic | 35.0% | |
| CACGATTCTCCATAGTATTA+AGG | + | chr5_1:57008472-57008491 | Msa0738950:intron | 35.0% | |
| TGCTGCAATCCTTAATACTA+TGG | - | chr5_1:57008484-57008503 | None:intergenic | 35.0% | |
| ATTCAGATAGCATGCTATCA+GGG | - | chr5_1:57008530-57008549 | None:intergenic | 35.0% | |
| TATTCAGATAGCATGCTATC+AGG | - | chr5_1:57008531-57008550 | None:intergenic | 35.0% | |
| GAAATATACGTAGATGCTAG+AGG | + | chr5_1:57008804-57008823 | Msa0738950:intron | 35.0% | |
| ATTATTGATGAAAACTCGCG+TGG | + | chr5_1:57008956-57008975 | Msa0738950:intron | 35.0% | |
| TAGCAGGATTCATACATTGT+AGG | - | chr5_1:57008998-57009017 | None:intergenic | 35.0% | |
| ! | TGTCATTTGTCTTTCTTTCG+TGG | + | chr5_1:57009578-57009597 | Msa0738950:intron | 35.0% |
| TCAAATATTGATACCTGGCT+TGG | - | chr5_1:57009711-57009730 | None:intergenic | 35.0% | |
| ! | GAAATTTCATCCTCGTGTTT+TGG | + | chr5_1:57009863-57009882 | Msa0738950:intron | 35.0% |
| AAATCCCAAACGGAAAAGAT+AGG | - | chr5_1:57010054-57010073 | None:intergenic | 35.0% | |
| !! | TATCTTTTCCGTTTGGGATT+TGG | + | chr5_1:57010053-57010072 | Msa0738950:intron | 35.0% |
| CATATCCATTGTCACATACA+TGG | - | chr5_1:57010132-57010151 | None:intergenic | 35.0% | |
| ATCTCTTCACAAATTGCCTA+TGG | - | chr5_1:57010198-57010217 | None:intergenic | 35.0% | |
| TGTATAACACAACCAGTCTA+TGG | - | chr5_1:57010237-57010256 | None:intergenic | 35.0% | |
| !! | TGTGTTATACAGCGGATTTT+TGG | + | chr5_1:57010246-57010265 | Msa0738950:intron | 35.0% |
| AAGCACTATGTTGTTGTCAA+TGG | - | chr5_1:57010279-57010298 | None:intergenic | 35.0% | |
| CATGAATCATAATGCAAACC+TGG | + | chr5_1:57010316-57010335 | Msa0738950:intron | 35.0% | |
| ! | AAACCTGGTTATGTTTTGCA+GGG | + | chr5_1:57010331-57010350 | Msa0738950:intron | 35.0% |
| AAACAATACAGTCACCTGAA+CGG | + | chr5_1:57010388-57010407 | Msa0738950:CDS | 35.0% | |
| ACTAAAAAAGTCAGGTGTTC+AGG | + | chr5_1:57010426-57010445 | Msa0738950:CDS | 35.0% | |
| AGACACTATATTATCTCCTG+AGG | + | chr5_1:57010524-57010543 | Msa0738950:CDS | 35.0% | |
| ! | AACTTTTGCTCTCAATGCAT+CGG | - | chr5_1:57010601-57010620 | None:intergenic | 35.0% |
| AGCAAAAGTTCTTATAACCG+AGG | + | chr5_1:57010611-57010630 | Msa0738950:CDS | 35.0% | |
| ATATATGGGTATGACCATGT+TGG | - | chr5_1:57011063-57011082 | None:intergenic | 35.0% | |
| GTCATGTTACCTCAGATATA+TGG | - | chr5_1:57011078-57011097 | None:intergenic | 35.0% | |
| ATAGACACTTGAGTAAAACG+AGG | - | chr5_1:57011183-57011202 | None:intergenic | 35.0% | |
| GTGACAGTGATGAATGATGA+TGG | - | chr5_1:57007330-57007349 | None:intergenic | 40.0% | |
| ! | TGAAGGAAAGGGTTTAGAGT+GGG | - | chr5_1:57007369-57007388 | None:intergenic | 40.0% |
| ATGAAGGAAAGGGTTTAGAG+TGG | - | chr5_1:57007370-57007389 | None:intergenic | 40.0% | |
| GATTTGAGAGGATGAAGGAA+AGG | - | chr5_1:57007381-57007400 | None:intergenic | 40.0% | |
| GAAAATTTGTGGGGGTTTGA+AGG | - | chr5_1:57007466-57007485 | None:intergenic | 40.0% | |
| GAAGGAATTGTGTGGTGAAA+TGG | - | chr5_1:57007489-57007508 | None:intergenic | 40.0% | |
| !!! | GTTTTGGAGAAGGAATTGTG+TGG | - | chr5_1:57007497-57007516 | None:intergenic | 40.0% |
| !!! | GGGAAGGAAAGTTGTTGTTT+TGG | - | chr5_1:57007513-57007532 | None:intergenic | 40.0% |
| TTTAAGGGAATTGGTTGGGA+AGG | - | chr5_1:57007529-57007548 | None:intergenic | 40.0% | |
| TTCCCAACCAATTCCCTTAA+AGG | + | chr5_1:57007528-57007547 | Msa0738950:CDS | 40.0% | |
| TCCCAACCAATTCCCTTAAA+GGG | + | chr5_1:57007529-57007548 | Msa0738950:CDS | 40.0% | |
| ! | ACCCTTTAAGGGAATTGGTT+GGG | - | chr5_1:57007533-57007552 | None:intergenic | 40.0% |
| ACAGGTTCAACGAAAAGGTT+TGG | + | chr5_1:57007617-57007636 | Msa0738950:CDS | 40.0% | |
| CGAAAAGGTTTGGATTTGGA+AGG | + | chr5_1:57007627-57007646 | Msa0738950:CDS | 40.0% | |
| ATTGAAGGAGTTTCGATTGG+TGG | + | chr5_1:57007657-57007676 | Msa0738950:CDS | 40.0% | |
| TGCTACCCTATTTGACAACA+GGG | - | chr5_1:57008056-57008075 | None:intergenic | 40.0% | |
| ATGCTACCCTATTTGACAAC+AGG | - | chr5_1:57008057-57008076 | None:intergenic | 40.0% | |
| TGTTGTCAAATAGGGTAGCA+TGG | + | chr5_1:57008056-57008075 | Msa0738950:intron | 40.0% | |
| CCACGACTTCCTATATACAT+TGG | - | chr5_1:57009422-57009441 | None:intergenic | 40.0% | |
| CCAATGTATATAGGAAGTCG+TGG | + | chr5_1:57009419-57009438 | Msa0738950:CDS | 40.0% | |
| ! | GATGCATGGAGGTACAAATA+CGG | - | chr5_1:57009468-57009487 | None:intergenic | 40.0% |
| TCAACATCGTCTTTGATGCA+TGG | - | chr5_1:57009482-57009501 | None:intergenic | 40.0% | |
| CTTGACGTTCACAAGACATT+GGG | + | chr5_1:57009509-57009528 | Msa0738950:CDS | 40.0% | |
| ! | GAATTGGTTGCTTTGGATGT+CGG | + | chr5_1:57009551-57009570 | Msa0738950:CDS | 40.0% |
| TTTGTCTTTCTTTCGTGGTC+AGG | + | chr5_1:57009583-57009602 | Msa0738950:intron | 40.0% | |
| TTGTCTTTCTTTCGTGGTCA+GGG | + | chr5_1:57009584-57009603 | Msa0738950:intron | 40.0% | |
| CAGGGGAGACATATGAAATA+CGG | + | chr5_1:57009643-57009662 | Msa0738950:intron | 40.0% | |
| TTCTGAATGGTCGAACAACA+AGG | - | chr5_1:57009674-57009693 | None:intergenic | 40.0% | |
| ACAACATGTTATACCAAGCC+AGG | + | chr5_1:57009695-57009714 | Msa0738950:CDS | 40.0% | |
| ! | GAAAATGCTTTTGCACGAGA+AGG | - | chr5_1:57009739-57009758 | None:intergenic | 40.0% |
| AAGTTCATGGCCCAAATTAG+CGG | + | chr5_1:57009764-57009783 | Msa0738950:intron | 40.0% | |
| TAGCCCAAAACCGCTAATTT+GGG | - | chr5_1:57009777-57009796 | None:intergenic | 40.0% | |
| !!! | CGGAAAAGATAGGTTTTAGG+AGG | - | chr5_1:57010044-57010063 | None:intergenic | 40.0% |
| TCATGCATCCAAATCCCAAA+CGG | - | chr5_1:57010064-57010083 | None:intergenic | 40.0% | |
| GGATTTGGATGCATGAGAAA+TGG | + | chr5_1:57010068-57010087 | Msa0738950:intron | 40.0% | |
| TTGAGCCATGTATGTGACAA+TGG | + | chr5_1:57010124-57010143 | Msa0738950:intron | 40.0% | |
| TCTTCACAAATTGCCTATGG+TGG | - | chr5_1:57010195-57010214 | None:intergenic | 40.0% | |
| ! | AGACTGGTTGTGTTATACAG+CGG | + | chr5_1:57010238-57010257 | Msa0738950:intron | 40.0% |
| ATGTTGTTGTCAATGGCAGA+AGG | - | chr5_1:57010272-57010291 | None:intergenic | 40.0% | |
| ATAGTGCTTTGCAGATCTCT+TGG | + | chr5_1:57010290-57010309 | Msa0738950:intron | 40.0% | |
| ! | CAAACCTGGTTATGTTTTGC+AGG | + | chr5_1:57010330-57010349 | Msa0738950:intron | 40.0% |
| TAACCCTGCAAAACATAACC+AGG | - | chr5_1:57010337-57010356 | None:intergenic | 40.0% | |
| ACTCAATCAGGAAAAAGCTG+AGG | + | chr5_1:57010365-57010384 | Msa0738950:CDS | 40.0% | |
| AACAATACAGTCACCTGAAC+GGG | + | chr5_1:57010389-57010408 | Msa0738950:CDS | 40.0% | |
| ! | TCTCAATTTGTTTCCCGTTC+AGG | - | chr5_1:57010405-57010424 | None:intergenic | 40.0% |
| ! | TCAATGCATCGGCATTAAGT+GGG | - | chr5_1:57010590-57010609 | None:intergenic | 40.0% |
| GGTATACATGAGCTGCTTAA+AGG | - | chr5_1:57010873-57010892 | None:intergenic | 40.0% | |
| ACAACTCTAACAACGTCAAC+TGG | - | chr5_1:57010894-57010913 | None:intergenic | 40.0% | |
| AGGGAGGAAGTAAGAAATCA+TGG | - | chr5_1:57010941-57010960 | None:intergenic | 40.0% | |
| AGAAATAGAGAGGAATAGGG+AGG | - | chr5_1:57010957-57010976 | None:intergenic | 40.0% | |
| CTACTGTGGTTGAATCATCT+AGG | - | chr5_1:57011030-57011049 | None:intergenic | 40.0% | |
| TGGTCATACCCATATATCTG+AGG | + | chr5_1:57011066-57011085 | Msa0738950:CDS | 40.0% | |
| CACTTGAGTAAAACGAGGAA+GGG | - | chr5_1:57011178-57011197 | None:intergenic | 40.0% | |
| ACACTTGAGTAAAACGAGGA+AGG | - | chr5_1:57011179-57011198 | None:intergenic | 40.0% | |
| CCATGGATTTGAGAGGATGA+AGG | - | chr5_1:57007386-57007405 | None:intergenic | 45.0% | |
| CCTTCATCCTCTCAAATCCA+TGG | + | chr5_1:57007383-57007402 | Msa0738950:exon | 45.0% | |
| AGAGTTGCCATGGATTTGAG+AGG | - | chr5_1:57007393-57007412 | None:intergenic | 45.0% | |
| GAGAGGGATTTGCATTTGTG+TGG | - | chr5_1:57007433-57007452 | None:intergenic | 45.0% | |
| ATTTGTGGGGGTTTGAAGGT+GGG | - | chr5_1:57007462-57007481 | None:intergenic | 45.0% | |
| AATTTGTGGGGGTTTGAAGG+TGG | - | chr5_1:57007463-57007482 | None:intergenic | 45.0% | |
| ! | GACCCTTTAAGGGAATTGGT+TGG | - | chr5_1:57007534-57007553 | None:intergenic | 45.0% |
| ACCAATTCCCTTAAAGGGTC+AGG | + | chr5_1:57007534-57007553 | Msa0738950:CDS | 45.0% | |
| ! | ACCTGACCCTTTAAGGGAAT+TGG | - | chr5_1:57007538-57007557 | None:intergenic | 45.0% |
| GAACCTGTGATTTCGCAACA+CGG | - | chr5_1:57007605-57007624 | None:intergenic | 45.0% | |
| GTGTCATACATCGAGACACA+CGG | + | chr5_1:57007886-57007905 | Msa0738950:intron | 45.0% | |
| CAACTTTGGCAGCAAAAGTG+TGG | - | chr5_1:57008264-57008283 | None:intergenic | 45.0% | |
| CGTGTGTGTGTGTGTCTATT+TGG | + | chr5_1:57008311-57008330 | Msa0738950:intron | 45.0% | |
| TGATGAAAACTCGCGTGGAA+AGG | + | chr5_1:57008961-57008980 | Msa0738950:intron | 45.0% | |
| TATAGAGTTCTCGCTGTAGC+AGG | - | chr5_1:57009014-57009033 | None:intergenic | 45.0% | |
| CAACTCAGGTAATCTACTGC+TGG | + | chr5_1:57009183-57009202 | Msa0738950:intron | 45.0% | |
| ! | CATGGAGGTACAAATACGGT+GGG | - | chr5_1:57009464-57009483 | None:intergenic | 45.0% |
| ACATCGTCTTTGATGCATGG+AGG | - | chr5_1:57009479-57009498 | None:intergenic | 45.0% | |
| GCTTGACGTTCACAAGACAT+TGG | + | chr5_1:57009508-57009527 | Msa0738950:CDS | 45.0% | |
| TGTCTTTCTTTCGTGGTCAG+GGG | + | chr5_1:57009585-57009604 | Msa0738950:intron | 45.0% | |
| ! | ATGGCCCAAATTAGCGGTTT+TGG | + | chr5_1:57009770-57009789 | Msa0738950:intron | 45.0% |
| ! | TGGCCCAAATTAGCGGTTTT+GGG | + | chr5_1:57009771-57009790 | Msa0738950:intron | 45.0% |
| GTAGCCCAAAACCGCTAATT+TGG | - | chr5_1:57009778-57009797 | None:intergenic | 45.0% | |
| TGTTTCATGGCCAAAACACG+AGG | - | chr5_1:57009876-57009895 | None:intergenic | 45.0% | |
| ! | ATGTTGTCAAATGGGTGCTG+CGG | + | chr5_1:57010149-57010168 | Msa0738950:intron | 45.0% |
| TGATGTTGTATCCCCAGTGA+AGG | - | chr5_1:57010553-57010572 | None:intergenic | 45.0% | |
| ! | CTCAATGCATCGGCATTAAG+TGG | - | chr5_1:57010591-57010610 | None:intergenic | 45.0% |
| AGACAAAATCAAGGTGCACG+AGG | + | chr5_1:57011126-57011145 | Msa0738950:three_prime_UTR | 45.0% | |
| TGTGTGGTGAAATGGCGAAG+TGG | - | chr5_1:57007417-57007436 | None:intergenic | 50.0% | |
| TGAAGGTGGGGTTTGTGAGA+GGG | - | chr5_1:57007449-57007468 | None:intergenic | 50.0% | |
| TTGAAGGTGGGGTTTGTGAG+AGG | - | chr5_1:57007450-57007469 | None:intergenic | 50.0% | |
| TTTGTGGGGGTTTGAAGGTG+GGG | - | chr5_1:57007461-57007480 | None:intergenic | 50.0% | |
| GTACCGTGTTGCGAAATCAC+AGG | + | chr5_1:57007599-57007618 | Msa0738950:CDS | 50.0% | |
| CGAGACACACGGCTAATTTG+AGG | + | chr5_1:57007897-57007916 | Msa0738950:intron | 50.0% | |
| GGAGGGCTGCCAATGTATAT+AGG | + | chr5_1:57009410-57009429 | Msa0738950:CDS | 50.0% | |
| ! | GCATGGAGGTACAAATACGG+TGG | - | chr5_1:57009465-57009484 | None:intergenic | 50.0% |
| GTGGTCAGGGGTTATCTTTG+AGG | + | chr5_1:57009597-57009616 | Msa0738950:intron | 50.0% | |
| TGAAGAGATGCCCACCATAC+CGG | + | chr5_1:57010209-57010228 | Msa0738950:intron | 50.0% | |
| GCGAAGTGGAAGAGTTGCCA+TGG | - | chr5_1:57007403-57007422 | None:intergenic | 55.0% | |
| ! | GGAGGTACAAATACGGTGGG+AGG | - | chr5_1:57009461-57009480 | None:intergenic | 55.0% |
| ACACAACCAGTCTATGGCGC+CGG | - | chr5_1:57010231-57010250 | None:intergenic | 55.0% | |
| TCTCCTGAGGTAGCCTTCAC+TGG | + | chr5_1:57010537-57010556 | Msa0738950:CDS | 55.0% | |
| CTCCTGAGGTAGCCTTCACT+GGG | + | chr5_1:57010538-57010557 | Msa0738950:CDS | 55.0% | |
| TCCTGAGGTAGCCTTCACTG+GGG | + | chr5_1:57010539-57010558 | Msa0738950:CDS | 55.0% | |
| TTGGCGTGCATGCTCTACTG+TGG | - | chr5_1:57011044-57011063 | None:intergenic | 55.0% | |
| GTAGAGCATGCACGCCAACA+TGG | + | chr5_1:57011046-57011065 | Msa0738950:CDS | 55.0% | |
| !! | GTCTATGGCGCCGGTATGGT+GGG | - | chr5_1:57010222-57010241 | None:intergenic | 60.0% |
| !! | AGTCTATGGCGCCGGTATGG+TGG | - | chr5_1:57010223-57010242 | None:intergenic | 60.0% |
| ACCATACCGGCGCCATAGAC+TGG | + | chr5_1:57010222-57010241 | Msa0738950:intron | 60.0% | |
| !! | ACCAGTCTATGGCGCCGGTA+TGG | - | chr5_1:57010226-57010245 | None:intergenic | 60.0% |
| TCCCCAGTGAAGGCTACCTC+AGG | - | chr5_1:57010543-57010562 | None:intergenic | 60.0% | |
| ! | AGGAAGGGCGTGCATGAGAG+AGG | - | chr5_1:57011163-57011182 | None:intergenic | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr5_1 | gene | 57007312 | 57011202 | 57007312 | ID=Msa0738950;Name=Msa0738950 |
| chr5_1 | mRNA | 57007312 | 57011202 | 57007312 | ID=Msa0738950-mRNA-1;Parent=Msa0738950;Name=Msa0738950-mRNA-1;_AED=0.07;_eAED=0.07;_QI=90|1|1|1|1|1|6|106|305 |
| chr5_1 | exon | 57007312 | 57007797 | 57007312 | ID=Msa0738950-mRNA-1:exon:16137;Parent=Msa0738950-mRNA-1 |
| chr5_1 | exon | 57009410 | 57009572 | 57009410 | ID=Msa0738950-mRNA-1:exon:16138;Parent=Msa0738950-mRNA-1 |
| chr5_1 | exon | 57009646 | 57009716 | 57009646 | ID=Msa0738950-mRNA-1:exon:16139;Parent=Msa0738950-mRNA-1 |
| chr5_1 | exon | 57010352 | 57010447 | 57010352 | ID=Msa0738950-mRNA-1:exon:16140;Parent=Msa0738950-mRNA-1 |
| chr5_1 | exon | 57010519 | 57010632 | 57010519 | ID=Msa0738950-mRNA-1:exon:16141;Parent=Msa0738950-mRNA-1 |
| chr5_1 | exon | 57011019 | 57011202 | 57011019 | ID=Msa0738950-mRNA-1:exon:16142;Parent=Msa0738950-mRNA-1 |
| chr5_1 | five_prime_UTR | 57007312 | 57007401 | 57007312 | ID=Msa0738950-mRNA-1:five_prime_utr;Parent=Msa0738950-mRNA-1 |
| chr5_1 | CDS | 57007402 | 57007797 | 57007402 | ID=Msa0738950-mRNA-1:cds;Parent=Msa0738950-mRNA-1 |
| chr5_1 | CDS | 57009410 | 57009572 | 57009410 | ID=Msa0738950-mRNA-1:cds;Parent=Msa0738950-mRNA-1 |
| chr5_1 | CDS | 57009646 | 57009716 | 57009646 | ID=Msa0738950-mRNA-1:cds;Parent=Msa0738950-mRNA-1 |
| chr5_1 | CDS | 57010352 | 57010447 | 57010352 | ID=Msa0738950-mRNA-1:cds;Parent=Msa0738950-mRNA-1 |
| chr5_1 | CDS | 57010519 | 57010632 | 57010519 | ID=Msa0738950-mRNA-1:cds;Parent=Msa0738950-mRNA-1 |
| chr5_1 | CDS | 57011019 | 57011096 | 57011019 | ID=Msa0738950-mRNA-1:cds;Parent=Msa0738950-mRNA-1 |
| chr5_1 | three_prime_UTR | 57011097 | 57011202 | 57011097 | ID=Msa0738950-mRNA-1:three_prime_utr;Parent=Msa0738950-mRNA-1 |
| Gene Sequence |
| Protein sequence |
