AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0685890


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0685890 MtrunA17_Chr4g0034481 96.539 549 16 2 1 548 1 547 0.0 1086
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0685890 AT1G49380.1 66.850 546 167 5 11 545 5 547 0.0 751

Find 144 sgRNAs with CRISPR-Local

Find 252 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CCACACCATAAGGACCTTTC+TGG 0.163357 4_4:+50172822 None:intergenic
CTTGCAATGTTGGCCCTTCT+TGG 0.176283 4_4:-50171845 Msa0685890:CDS
TGAATAGTATCTTTGCTATT+TGG 0.198189 4_4:-50169125 Msa0685890:CDS
TTCTGGTTCTTTGAGCTTAC+TGG 0.214243 4_4:+50172839 None:intergenic
GATGATGATTCAACTATTTC+AGG 0.215636 4_4:+50169466 None:intergenic
TCTAATTTGCCTTTGGCTAT+TGG 0.216573 4_4:-50172764 Msa0685890:CDS
AGTGCTGCAGGGAGCTTTAA+AGG 0.217791 4_4:-50171302 Msa0685890:CDS
CAGAGCAAAGTTAGAGTTTC+CGG 0.234060 4_4:-50169518 Msa0685890:CDS
AATGGAGATAAGAAACTTTA+TGG 0.238655 4_4:-50170775 Msa0685890:CDS
GTTAACTCTCCTGATGTTAA+AGG 0.262581 4_4:-50170730 Msa0685890:CDS
TTATCTCCATTGATCTTTAG+AGG 0.290427 4_4:+50170787 None:intergenic
CCTAACACAGGATGATCTTC+AGG 0.304432 4_4:+50171932 None:intergenic
GTGATACCATCATATCTTAA+AGG 0.306162 4_4:+50170889 None:intergenic
ATTTCCCTTCCTTATCATAA+AGG 0.309945 4_4:+50170106 None:intergenic
ACTCCAATCCGTCTGGTATA+TGG 0.313882 4_4:+50170867 None:intergenic
CACTCATCAAGGTTTCAAAA+AGG 0.314179 4_4:-50171784 Msa0685890:intron
TTGAGAAGACATTGATTCAT+AGG 0.322099 4_4:+50173055 None:intergenic
GATTCTCTCTAATTTGCCTT+TGG 0.333030 4_4:-50172771 Msa0685890:CDS
TCATGTCAACAGATTCTCTA+TGG 0.335451 4_4:-50171180 Msa0685890:CDS
CAGTTTCAGTTTCCAGTTTG+AGG 0.335650 4_4:+50173121 None:intergenic
GATGGAACAACAGTCGTTAT+TGG 0.338022 4_4:-50169553 Msa0685890:CDS
GATGATCTTCAGGGTAGTTC+TGG 0.339110 4_4:+50171942 None:intergenic
CCAACATTGCAAGAAATATA+GGG 0.340845 4_4:+50171855 None:intergenic
GATAAGGAAGGGAAATTTGC+AGG 0.341411 4_4:-50170099 Msa0685890:CDS
TTGTGTAAGTGCAGGCTATA+AGG 0.342045 4_4:+50171816 None:intergenic
CAACTGCAAACTGTACATTA+TGG 0.346035 4_4:+50169097 None:intergenic
TATAGCACTGCTGTTGATAA+TGG 0.346092 4_4:-50171339 Msa0685890:CDS
CCCTATATTTCTTGCAATGT+TGG 0.348656 4_4:-50171855 Msa0685890:CDS
TTGATTGGGAGCTTTGAATT+AGG 0.356379 4_4:+50170066 None:intergenic
GCCAACATTGCAAGAAATAT+AGG 0.366507 4_4:+50171854 None:intergenic
GACATAAGAACTTTGGTATC+TGG 0.370057 4_4:+50169178 None:intergenic
CCTGAAGATCATCCTGTGTT+AGG 0.379251 4_4:-50171932 Msa0685890:CDS
GTCAATTGTCCTTTATGATA+AGG 0.380317 4_4:-50170115 Msa0685890:CDS
AGGTTCAGTCACTGTGCCTC+AGG 0.385654 4_4:-50171282 Msa0685890:CDS
TCTGAGCCGTCAATGTTGAT+TGG 0.394000 4_4:+50170051 None:intergenic
CTGAGCCGTCAATGTTGATT+GGG 0.396472 4_4:+50170052 None:intergenic
AGATGTTGGTACTATACTAA+TGG 0.401571 4_4:-50171602 Msa0685890:CDS
AGTTTCAGTTTCCAGTTTGA+GGG 0.403729 4_4:+50173122 None:intergenic
GGTCAAGAAGTTGAGTAAAA+AGG 0.404743 4_4:-50172801 Msa0685890:CDS
CAGTAGTGGCTTGGACTTGA+AGG 0.414087 4_4:-50170004 Msa0685890:intron
GCTGACACAGTCCCTCAAAC+TGG 0.415405 4_4:-50173133 None:intergenic
AAAACTCAGGTTTCTCGCCT+TGG 0.423189 4_4:+50171969 None:intergenic
GGTGCCATAGCCAAGTTATA+AGG 0.424092 4_4:+50170808 None:intergenic
AAGAACCAGAAAGGTCCTTA+TGG 0.425770 4_4:-50172827 Msa0685890:CDS
AGTGCTATATGAACGCCAAC+AGG 0.426144 4_4:+50171353 None:intergenic
GACTGTTGTTCCATCTTGTA+AGG 0.430467 4_4:+50169561 None:intergenic
TTAGTATAGTACCAACATCT+TGG 0.436893 4_4:+50171605 None:intergenic
TGATACCATCATATCTTAAA+GGG 0.444057 4_4:+50170890 None:intergenic
GATGTTGGTACTATACTAAT+GGG 0.446081 4_4:-50171601 Msa0685890:CDS
CCAGTTGTATATGCTGGATT+TGG 0.446587 4_4:-50169871 Msa0685890:CDS
ATTGTCGTTGTGGATGCAAT+AGG 0.449874 4_4:-50170027 Msa0685890:CDS
AGCAAGAGGTTCATCTCGTC+CGG 0.469158 4_4:+50169499 None:intergenic
TGCAATAGGCAGTAGTGGCT+TGG 0.469467 4_4:-50170013 Msa0685890:CDS
GGAGGAACTTTAAGTGCTGC+AGG 0.471844 4_4:-50171314 Msa0685890:CDS
GCCAACAGGGGCTAGCCGAC+CGG 0.474375 4_4:+50171367 None:intergenic
ACTTACATTCCTTTAACATC+AGG 0.476122 4_4:+50170721 None:intergenic
AACTTCTTGACCACACCATA+AGG 0.476566 4_4:+50172812 None:intergenic
TCTATGGATTATTATGAAAG+TGG 0.477182 4_4:-50171164 Msa0685890:CDS
CGATCTTTCCCTCTTGAACA+TGG 0.481054 4_4:-50170953 Msa0685890:CDS
CTTTCCCTCTTGAACATGGA+TGG 0.481191 4_4:-50170949 Msa0685890:CDS
TTTGAACAAGGGATGAAAAG+TGG 0.482240 4_4:+50173027 None:intergenic
ATGATGATTCAACTATTTCA+GGG 0.487321 4_4:+50169467 None:intergenic
TTCTCCTGTGTGAGTGGTGG+AGG 0.491970 4_4:+50172887 None:intergenic
ACATCTTGGATTGATGCTCT+TGG 0.492453 4_4:+50171619 None:intergenic
CCAAATCCAGCATATACAAC+TGG 0.494043 4_4:+50169871 None:intergenic
CTGAAATACTCCAATCCGTC+TGG 0.496597 4_4:+50170860 None:intergenic
TATGTTATGCAGACTGATCC+TGG 0.497099 4_4:-50169898 Msa0685890:intron
GCATATACAACTGGCACGCC+AGG 0.499803 4_4:+50169880 None:intergenic
CAGCTATTTATCTCATTCAC+AGG 0.500481 4_4:-50169824 Msa0685890:intron
GATACAAGACATAAGAACTT+TGG 0.502117 4_4:+50169171 None:intergenic
TCTGTATTAAAAGCATCAGT+TGG 0.502693 4_4:+50171206 None:intergenic
CAATGAAGGACCTTATAACT+TGG 0.502844 4_4:-50170818 Msa0685890:CDS
TACTATTCATCTCCCAAATG+AGG 0.503229 4_4:+50169139 None:intergenic
TTTGTTGTAGGAGACGTTCT+CGG 0.507703 4_4:-50171251 Msa0685890:CDS
ACTAATGGGAGCTGGATATG+AGG 0.511613 4_4:-50171587 Msa0685890:intron
ATAGCACTGCTGTTGATAAT+GGG 0.512040 4_4:-50171338 Msa0685890:CDS
AAGCTCCCAATCAACATTGA+CGG 0.512647 4_4:-50170057 Msa0685890:CDS
GGATTATAGGTATTCTTGAA+AGG 0.517238 4_4:-50171419 Msa0685890:intron
CTATGGATTATTATGAAAGT+GGG 0.518677 4_4:-50171163 Msa0685890:CDS
GCCGGTCGGCTAGCCCCTGT+TGG 0.520609 4_4:-50171368 Msa0685890:CDS
GGCGTGCCAGTTGTATATGC+TGG 0.520966 4_4:-50169877 Msa0685890:CDS
ATTGTCCTTTATGATAAGGA+AGG 0.526577 4_4:-50170111 Msa0685890:CDS
CAAATTCTCAAGGACAATGA+AGG 0.527947 4_4:-50170832 Msa0685890:CDS
ATGGCACCTCTAAAGATCAA+TGG 0.528038 4_4:-50170793 Msa0685890:CDS
TCACCATATACCAGACGGAT+TGG 0.537124 4_4:-50170870 Msa0685890:CDS
TTCAGCTCTGCAAATTCTCA+AGG 0.537400 4_4:-50170842 Msa0685890:CDS
TGTGTCACATGATGTCTTTG+AGG 0.540282 4_4:-50173081 Msa0685890:CDS
AACGACCCTTTAAGATATGA+TGG 0.540927 4_4:-50170895 Msa0685890:CDS
AACACAACTCCCACTCATCA+AGG 0.543840 4_4:-50171795 Msa0685890:CDS
GGTTCAGTCACTGTGCCTCA+GGG 0.545272 4_4:-50171281 Msa0685890:CDS
AAGATATGGGCCTTACAAGA+TGG 0.553885 4_4:-50169571 Msa0685890:CDS
TTGAACAAGGGATGAAAAGT+GGG 0.557949 4_4:+50173028 None:intergenic
ATTAAAAGCATCAGTTGGAA+AGG 0.559039 4_4:+50171211 None:intergenic
ATCTAAGCAAACTGATAGCA+TGG 0.559854 4_4:-50169440 Msa0685890:intron
TATAAGGGATGCACCAAGAA+GGG 0.561371 4_4:+50171832 None:intergenic
CTAACACAGGATGATCTTCA+GGG 0.561639 4_4:+50171933 None:intergenic
CTATAAGGGATGCACCAAGA+AGG 0.562534 4_4:+50171831 None:intergenic
TGTGTAAGTGCAGGCTATAA+GGG 0.563934 4_4:+50171817 None:intergenic
GGAGAGTTAACATCTCCAAC+CGG 0.566287 4_4:+50170742 None:intergenic
GGTACTATACTAATGGGAGC+TGG 0.567256 4_4:-50171595 Msa0685890:CDS
CCACGAAAAGCATACAAAGT+TGG 0.570654 4_4:+50171395 None:intergenic
CATAAAGGACAATTGACTGC+AGG 0.571577 4_4:+50170121 None:intergenic
CATGTTCAAGAGGGAAAGAT+CGG 0.573438 4_4:+50170954 None:intergenic
TTGTCCTTTATGATAAGGAA+GGG 0.575204 4_4:-50170110 Msa0685890:CDS
GGAGACGTTCTCGGTCCTAC+CGG 0.575828 4_4:-50171242 Msa0685890:CDS
ACTATTCATCTCCCAAATGA+GGG 0.576985 4_4:+50169140 None:intergenic
AGTTCTGTTGAATTTGAACA+AGG 0.583852 4_4:+50173015 None:intergenic
TGGATGGAAAAGAAGTAATG+AGG 0.584497 4_4:-50170933 Msa0685890:CDS
GGAACAACAGTCGTTATTGG+AGG 0.585525 4_4:-50169550 Msa0685890:CDS
TCATCATTCTCCTGTGTGAG+TGG 0.588845 4_4:+50172881 None:intergenic
TCATTCTCCTGTGTGAGTGG+TGG 0.589165 4_4:+50172884 None:intergenic
GTCATTTATCCACTCTGCCG+AGG 0.592482 4_4:-50171674 Msa0685890:CDS
TTCTCCTCCACCACTCACAC+AGG 0.595333 4_4:-50172891 Msa0685890:CDS
TGCAGTTGATGGTGAATGAG+AGG 0.596112 4_4:+50172975 None:intergenic
AGAGCATCAATCCAAGATGT+TGG 0.597012 4_4:-50171616 Msa0685890:CDS
CTCTTGCTTACGTATAACCT+CGG 0.597641 4_4:+50171657 None:intergenic
GTGGATGCAATAGGCAGTAG+TGG 0.602202 4_4:-50170018 Msa0685890:CDS
GTAAGCTCAAAGAACCAGAA+AGG 0.611466 4_4:-50172836 Msa0685890:CDS
GAGTTGTGTTGTGTAAGTGC+AGG 0.612701 4_4:+50171808 None:intergenic
CGGCTCAGAAATTGTCGTTG+TGG 0.613524 4_4:-50170037 Msa0685890:CDS
AGTTGGAAAGGAAAGAAAGC+CGG 0.613737 4_4:+50171223 None:intergenic
CAACATTGCAAGAAATATAG+GGG 0.614719 4_4:+50171856 None:intergenic
AGGACCTTATAACTTGGCTA+TGG 0.614764 4_4:-50170812 Msa0685890:CDS
AACATTTCTCCAATAGCCAA+AGG 0.619561 4_4:+50172755 None:intergenic
GTGCTATATGAACGCCAACA+GGG 0.620699 4_4:+50171354 None:intergenic
GCAGTTGATGGTGAATGAGA+GGG 0.632096 4_4:+50172976 None:intergenic
TAGTTCTGGAAATAAAACTC+AGG 0.635294 4_4:+50171956 None:intergenic
GTTCAGTCACTGTGCCTCAG+GGG 0.641281 4_4:-50171280 Msa0685890:CDS
GAACAACAGTCGTTATTGGA+GGG 0.642119 4_4:-50169549 Msa0685890:CDS
CCAGAAAGGTCCTTATGGTG+TGG 0.650861 4_4:-50172822 Msa0685890:CDS
TGCTATATGAACGCCAACAG+GGG 0.655968 4_4:+50171355 None:intergenic
TACGTATAACCTCGGCAGAG+TGG 0.660612 4_4:+50171665 None:intergenic
GAGAATGATGATATCAACAG+TGG 0.661987 4_4:-50172869 Msa0685890:CDS
CTGCTGTTGATAATGGGTGG+AGG 0.663763 4_4:-50171332 Msa0685890:CDS
TATGGATTATTATGAAAGTG+GGG 0.664635 4_4:-50171162 Msa0685890:CDS
CTATTCATCTCCCAAATGAG+GGG 0.664791 4_4:+50169141 None:intergenic
AATACATGTGATCGAAACCA+AGG 0.665045 4_4:+50171882 None:intergenic
GAGGAACTTTAAGTGCTGCA+GGG 0.669763 4_4:-50171313 Msa0685890:CDS
TGGTATCACCATATACCAGA+CGG 0.679132 4_4:-50170875 Msa0685890:CDS
GTTCTGTTGAATTTGAACAA+GGG 0.681172 4_4:+50173016 None:intergenic
GCACTGCTGTTGATAATGGG+TGG 0.691436 4_4:-50171335 Msa0685890:CDS
GGATTATTATGAAAGTGGGG+AGG 0.692179 4_4:-50171159 Msa0685890:intron
ACAACAAAATTCAGCCCCTG+AGG 0.701712 4_4:+50171266 None:intergenic
GGAAAGGAAAGAAAGCCGGT+AGG 0.713048 4_4:+50171227 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! ATTTATTTTATCTTTTGATA+TGG - chr4_4:50169712-50169731 Msa0685890:intron 10.0%
!! ATTAAGATATTTATAAAAAC+AGG - chr4_4:50169753-50169772 Msa0685890:intron 10.0%
!! AAAATATTTGTTTCAATATT+TGG - chr4_4:50171538-50171557 Msa0685890:intron 10.0%
!!! AAAATTTTGAGAACTAAAAA+GGG + chr4_4:50169576-50169595 None:intergenic 15.0%
!!! TCTAATTAACAAAAGTATTA+TGG + chr4_4:50169779-50169798 None:intergenic 15.0%
!!! AAAATGTAATTTTGGATTAT+AGG - chr4_4:50170783-50170802 Msa0685890:CDS 15.0%
!!! GTTTTTGTTTTATATGAAAT+TGG - chr4_4:50171088-50171107 Msa0685890:intron 15.0%
!!! AATGAATTTTAGTTTGTATT+TGG - chr4_4:50171595-50171614 Msa0685890:CDS 15.0%
!!! CAAAAATCTTTTTCTTTTAT+TGG + chr4_4:50171911-50171930 None:intergenic 15.0%
!!! TAAAATGTGAATTTACTTTT+TGG - chr4_4:50172613-50172632 Msa0685890:intron 15.0%
!!! CAAAATTTTGAGAACTAAAA+AGG + chr4_4:50169577-50169596 None:intergenic 20.0%
!! GTAAACATATACTTATCATA+TGG + chr4_4:50169920-50169939 None:intergenic 20.0%
!! AAAAATGACTAAGATATGTT+TGG + chr4_4:50170140-50170159 None:intergenic 20.0%
!! GTACTAAAGAAAAATTTCTA+TGG - chr4_4:50170207-50170226 Msa0685890:intron 20.0%
!! AAAATATTCAAGTCTATTGT+TGG + chr4_4:50170750-50170769 None:intergenic 20.0%
!!! TGCTATTTTGTTGTAAAATT+TGG - chr4_4:50171203-50171222 Msa0685890:CDS 20.0%
!! ATACAAACTAAAATTCATTG+AGG + chr4_4:50171594-50171613 None:intergenic 20.0%
!! TAGATAATTGTAATAGTTTG+AGG - chr4_4:50171883-50171902 Msa0685890:CDS 20.0%
!! AAATTACAAATTAAGTGCAA+AGG - chr4_4:50171955-50171974 Msa0685890:CDS 20.0%
!! TCTATAAATGAAAGCAAAAT+TGG + chr4_4:50172490-50172509 None:intergenic 20.0%
!!! TTTTGGTAAATTGAAAGATA+TGG - chr4_4:50172630-50172649 Msa0685890:intron 20.0%
!! TTTGGTAAATTGAAAGATAT+GGG - chr4_4:50172631-50172650 Msa0685890:intron 20.0%
!!! TTCACCATTGCTTTTTTAAT+GGG - chr4_4:50169481-50169500 Msa0685890:CDS 25.0%
!!! ATTGCTTTTTTAATGGGTTT+GGG - chr4_4:50169487-50169506 Msa0685890:CDS 25.0%
!! TAGTTCTCAAAATTTTGCTT+AGG - chr4_4:50169580-50169599 Msa0685890:intron 25.0%
! GGGTGAACTTTAAATTATTA+TGG - chr4_4:50169841-50169860 Msa0685890:CDS 25.0%
! TAAAGAAAAATTTCTATGGC+AGG - chr4_4:50170211-50170230 Msa0685890:intron 25.0%
! AAATAGTTAAGTGTGAATCA+TGG + chr4_4:50170667-50170686 None:intergenic 25.0%
!! TCTATGGATTATTATGAAAG+TGG - chr4_4:50171051-50171070 Msa0685890:intron 25.0%
!! CTATGGATTATTATGAAAGT+GGG - chr4_4:50171052-50171071 Msa0685890:intron 25.0%
!! TATGGATTATTATGAAAGTG+GGG - chr4_4:50171053-50171072 Msa0685890:intron 25.0%
!! AAATACACTTTGACTTATTC+TGG + chr4_4:50171151-50171170 None:intergenic 25.0%
! TGATACCATCATATCTTAAA+GGG + chr4_4:50171328-50171347 None:intergenic 25.0%
! AATGGAGATAAGAAACTTTA+TGG - chr4_4:50171440-50171459 Msa0685890:intron 25.0%
! ATCAGATAATTGAAGTAGTT+AGG - chr4_4:50171844-50171863 Msa0685890:CDS 25.0%
! TAACATAAGCATTAAGCAAT+AGG + chr4_4:50172304-50172323 None:intergenic 25.0%
!!! AGTGTTATTTGCTCATTTTT+AGG + chr4_4:50172550-50172569 None:intergenic 25.0%
! TAAAAATGAGCAAATAACAC+TGG - chr4_4:50172549-50172568 Msa0685890:intron 25.0%
! ATGATGATTCAACTATTTCA+GGG + chr4_4:50172751-50172770 None:intergenic 25.0%
! GAATTAAAAGACTCTTCAAT+TGG - chr4_4:50172835-50172854 Msa0685890:CDS 25.0%
! TGACATACAAACATACAAAT+TGG - chr4_4:50172899-50172918 Msa0685890:CDS 25.0%
!!! TGAATAGTATCTTTGCTATT+TGG - chr4_4:50173090-50173109 Msa0685890:exon 25.0%
!! TTGAGAAGACATTGATTCAT+AGG + chr4_4:50169163-50169182 None:intergenic 30.0%
GTTCTGTTGAATTTGAACAA+GGG + chr4_4:50169202-50169221 None:intergenic 30.0%
AGTTCTGTTGAATTTGAACA+AGG + chr4_4:50169203-50169222 None:intergenic 30.0%
!!! TATTCTTTCCCTTGTTTTTG+AGG + chr4_4:50169267-50169286 None:intergenic 30.0%
!!! GTTCACCATTGCTTTTTTAA+TGG - chr4_4:50169480-50169499 Msa0685890:CDS 30.0%
CAAACCCATTAAAAAAGCAA+TGG + chr4_4:50169488-50169507 None:intergenic 30.0%
!!! CATTGCTTTTTTAATGGGTT+TGG - chr4_4:50169486-50169505 Msa0685890:CDS 30.0%
AATCAAAGTCAAATTTGCCA+CGG + chr4_4:50169948-50169967 None:intergenic 30.0%
AATGACTAAGATATGTTTGG+TGG + chr4_4:50170137-50170156 None:intergenic 30.0%
!! GAGAGCTAAAATTGATTTTG+AGG + chr4_4:50170167-50170186 None:intergenic 30.0%
!! TAGTTCTGGAAATAAAACTC+AGG + chr4_4:50170262-50170281 None:intergenic 30.0%
CAAGTAAAAAATCCTAACAC+AGG + chr4_4:50170298-50170317 None:intergenic 30.0%
!!! CTGTGTTAGGATTTTTTACT+TGG - chr4_4:50170296-50170315 Msa0685890:intron 30.0%
!!! TAGGATTTTTTACTTGGAGA+TGG - chr4_4:50170302-50170321 Msa0685890:intron 30.0%
CAACATTGCAAGAAATATAG+GGG + chr4_4:50170362-50170381 None:intergenic 30.0%
CCAACATTGCAAGAAATATA+GGG + chr4_4:50170363-50170382 None:intergenic 30.0%
!!! TTTTTGAAACCTTGATGAGT+GGG + chr4_4:50170432-50170451 None:intergenic 30.0%
ATCAAGGTTTCAAAAAGGTT+TGG - chr4_4:50170436-50170455 Msa0685890:intron 30.0%
! TTTTCTGTGTTCATAATGCT+TGG - chr4_4:50170471-50170490 Msa0685890:intron 30.0%
TTAGTATAGTACCAACATCT+TGG + chr4_4:50170613-50170632 None:intergenic 30.0%
AGATGTTGGTACTATACTAA+TGG - chr4_4:50170613-50170632 Msa0685890:intron 30.0%
GATGTTGGTACTATACTAAT+GGG - chr4_4:50170614-50170633 Msa0685890:intron 30.0%
! GCGCTAACAAAATGTAATTT+TGG - chr4_4:50170775-50170794 Msa0685890:CDS 30.0%
GGATTATAGGTATTCTTGAA+AGG - chr4_4:50170796-50170815 Msa0685890:CDS 30.0%
!! ATTAAAAGCATCAGTTGGAA+AGG + chr4_4:50171007-50171026 None:intergenic 30.0%
!! TCTGTATTAAAAGCATCAGT+TGG + chr4_4:50171012-50171031 None:intergenic 30.0%
! TGGTTTTCGATTTTTGTTAC+AGG - chr4_4:50171223-50171242 Msa0685890:CDS 30.0%
GTGATACCATCATATCTTAA+AGG + chr4_4:50171329-50171348 None:intergenic 30.0%
TTATCTCCATTGATCTTTAG+AGG + chr4_4:50171431-50171450 None:intergenic 30.0%
! ACTTTATGGTACTTTTCTAC+CGG - chr4_4:50171454-50171473 Msa0685890:intron 30.0%
ACTTACATTCCTTTAACATC+AGG + chr4_4:50171497-50171516 None:intergenic 30.0%
GTTTCAATATTTGGAAGCTT+TGG - chr4_4:50171547-50171566 Msa0685890:intron 30.0%
GTCAATTGTCCTTTATGATA+AGG - chr4_4:50172100-50172119 Msa0685890:intron 30.0%
ATTGTCCTTTATGATAAGGA+AGG - chr4_4:50172104-50172123 Msa0685890:intron 30.0%
TTGTCCTTTATGATAAGGAA+GGG - chr4_4:50172105-50172124 Msa0685890:intron 30.0%
ATTTCCCTTCCTTATCATAA+AGG + chr4_4:50172112-50172131 None:intergenic 30.0%
TAAAGGAAAATAACCAGACT+TGG + chr4_4:50172249-50172268 None:intergenic 30.0%
ACACAACTAATTGCATCTAA+AGG + chr4_4:50172266-50172285 None:intergenic 30.0%
TTATGCATATGACATTTGTC+TGG + chr4_4:50172517-50172536 None:intergenic 30.0%
GATGATGATTCAACTATTTC+AGG + chr4_4:50172752-50172771 None:intergenic 30.0%
TAAAAGACTCTTCAATTGGA+TGG - chr4_4:50172839-50172858 Msa0685890:CDS 30.0%
ATTGGATGGTAGCATATATA+TGG - chr4_4:50172853-50172872 Msa0685890:CDS 30.0%
! AAGATGATCTGCAAAAGTTT+TGG + chr4_4:50172946-50172965 None:intergenic 30.0%
GATACAAGACATAAGAACTT+TGG + chr4_4:50173047-50173066 None:intergenic 30.0%
AGTTTCAGTTTCCAGTTTGA+GGG + chr4_4:50169096-50169115 None:intergenic 35.0%
TTGAACAAGGGATGAAAAGT+GGG + chr4_4:50169190-50169209 None:intergenic 35.0%
TTTGAACAAGGGATGAAAAG+TGG + chr4_4:50169191-50169210 None:intergenic 35.0%
AACTGCAACCTCAAAAACAA+GGG - chr4_4:50169256-50169275 Msa0685890:intron 35.0%
GAGAATGATGATATCAACAG+TGG - chr4_4:50169346-50169365 Msa0685890:intron 35.0%
GGTCAAGAAGTTGAGTAAAA+AGG - chr4_4:50169414-50169433 Msa0685890:intron 35.0%
! GATTCTCTCTAATTTGCCTT+TGG - chr4_4:50169444-50169463 Msa0685890:CDS 35.0%
! TCTAATTTGCCTTTGGCTAT+TGG - chr4_4:50169451-50169470 Msa0685890:CDS 35.0%
AACATTTCTCCAATAGCCAA+AGG + chr4_4:50169463-50169482 None:intergenic 35.0%
TTCCTCAAGTTTGTGAATTG+TGG - chr4_4:50169820-50169839 Msa0685890:intron 35.0%
TCCTCAAGTTTGTGAATTGT+GGG - chr4_4:50169821-50169840 Msa0685890:intron 35.0%
GTATATGTTTACTTCTACCG+TGG - chr4_4:50169928-50169947 Msa0685890:intron 35.0%
AGTCTAAAAATCACGATCGA+AGG - chr4_4:50170044-50170063 Msa0685890:CDS 35.0%
!! ACATGTTTGCATTCGCTTTT+GGG + chr4_4:50170189-50170208 None:intergenic 35.0%
! TACATGTTTGCATTCGCTTT+TGG + chr4_4:50170190-50170209 None:intergenic 35.0%
AATACATGTGATCGAAACCA+AGG + chr4_4:50170336-50170355 None:intergenic 35.0%
CCCTATATTTCTTGCAATGT+TGG - chr4_4:50170360-50170379 Msa0685890:intron 35.0%
GCCAACATTGCAAGAAATAT+AGG + chr4_4:50170364-50170383 None:intergenic 35.0%
!!! CTTTTTGAAACCTTGATGAG+TGG + chr4_4:50170433-50170452 None:intergenic 35.0%
CACTCATCAAGGTTTCAAAA+AGG - chr4_4:50170431-50170450 Msa0685890:intron 35.0%
! GGTTTCAAAAAGGTTTGGTT+TGG - chr4_4:50170441-50170460 Msa0685890:intron 35.0%
! TATAGCACTGCTGTTGATAA+TGG - chr4_4:50170876-50170895 Msa0685890:CDS 35.0%
!! ATAGCACTGCTGTTGATAAT+GGG - chr4_4:50170877-50170896 Msa0685890:CDS 35.0%
TCATGTCAACAGATTCTCTA+TGG - chr4_4:50171035-50171054 Msa0685890:intron 35.0%
! TACACTTTGACTTATTCTGG+TGG + chr4_4:50171148-50171167 None:intergenic 35.0%
! TTTTCCATCCATGTTCAAGA+GGG + chr4_4:50171273-50171292 None:intergenic 35.0%
TGGATGGAAAAGAAGTAATG+AGG - chr4_4:50171282-50171301 Msa0685890:CDS 35.0%
!! AACGACCCTTTAAGATATGA+TGG - chr4_4:50171320-50171339 Msa0685890:CDS 35.0%
CAAATTCTCAAGGACAATGA+AGG - chr4_4:50171383-50171402 Msa0685890:CDS 35.0%
CAATGAAGGACCTTATAACT+TGG - chr4_4:50171397-50171416 Msa0685890:CDS 35.0%
GTTAACTCTCCTGATGTTAA+AGG - chr4_4:50171485-50171504 Msa0685890:intron 35.0%
ACGAGTCTTTAGTGTATGAT+TGG - chr4_4:50171812-50171831 Msa0685890:CDS 35.0%
CGAGTCTTTAGTGTATGATT+GGG - chr4_4:50171813-50171832 Msa0685890:CDS 35.0%
GAGTCTTTAGTGTATGATTG+GGG - chr4_4:50171814-50171833 Msa0685890:CDS 35.0%
AGTCTTTAGTGTATGATTGG+GGG - chr4_4:50171815-50171834 Msa0685890:CDS 35.0%
TATCAAGTCCTAGTCTGTAA+TGG + chr4_4:50171985-50172004 None:intergenic 35.0%
TAGGACTTGATATGTCATTC+TGG - chr4_4:50171993-50172012 Msa0685890:intron 35.0%
!! TTGATTGGGAGCTTTGAATT+AGG + chr4_4:50172152-50172171 None:intergenic 35.0%
CAGCTATTTATCTCATTCAC+AGG - chr4_4:50172391-50172410 Msa0685890:intron 35.0%
ATCTAAGCAAACTGATAGCA+TGG - chr4_4:50172775-50172794 Msa0685890:CDS 35.0%
!!! TTGTTGCTTTTGAGACATCA+AGG - chr4_4:50172809-50172828 Msa0685890:CDS 35.0%
AACATACAAATTGGATGCGA+TGG - chr4_4:50172908-50172927 Msa0685890:CDS 35.0%
GACATAAGAACTTTGGTATC+TGG + chr4_4:50173040-50173059 None:intergenic 35.0%
!! TATCATTTTTGCCCCTCATT+TGG - chr4_4:50173063-50173082 Msa0685890:CDS 35.0%
!! ATCATTTTTGCCCCTCATTT+GGG - chr4_4:50173064-50173083 Msa0685890:CDS 35.0%
ACTATTCATCTCCCAAATGA+GGG + chr4_4:50173078-50173097 None:intergenic 35.0%
TACTATTCATCTCCCAAATG+AGG + chr4_4:50173079-50173098 None:intergenic 35.0%
CAACTGCAAACTGTACATTA+TGG + chr4_4:50173121-50173140 None:intergenic 35.0%
CAGTTTCAGTTTCCAGTTTG+AGG + chr4_4:50169097-50169116 None:intergenic 40.0%
TGTGTCACATGATGTCTTTG+AGG - chr4_4:50169134-50169153 Msa0685890:CDS 40.0%
!!! GTTTTTGAGGTTGCAGTTGA+TGG + chr4_4:50169254-50169273 None:intergenic 40.0%
CAACTGCAACCTCAAAAACA+AGG - chr4_4:50169255-50169274 Msa0685890:intron 40.0%
!! TTCTGGTTCTTTGAGCTTAC+TGG + chr4_4:50169379-50169398 None:intergenic 40.0%
GTAAGCTCAAAGAACCAGAA+AGG - chr4_4:50169379-50169398 Msa0685890:intron 40.0%
AAGAACCAGAAAGGTCCTTA+TGG - chr4_4:50169388-50169407 Msa0685890:intron 40.0%
AACTTCTTGACCACACCATA+AGG + chr4_4:50169406-50169425 None:intergenic 40.0%
ACCCACAATTCACAAACTTG+AGG + chr4_4:50169825-50169844 None:intergenic 40.0%
CTAACACAGGATGATCTTCA+GGG + chr4_4:50170285-50170304 None:intergenic 40.0%
!! TGGAGATGGATTTTCTTCCT+TGG - chr4_4:50170316-50170335 Msa0685890:intron 40.0%
TATAAGGGATGCACCAAGAA+GGG + chr4_4:50170386-50170405 None:intergenic 40.0%
TGTGTAAGTGCAGGCTATAA+GGG + chr4_4:50170401-50170420 None:intergenic 40.0%
TTGTGTAAGTGCAGGCTATA+AGG + chr4_4:50170402-50170421 None:intergenic 40.0%
TACGAAACAAATAAGGCCCT+GGG + chr4_4:50170517-50170536 None:intergenic 40.0%
GACCACCTACGAAACAAATA+AGG + chr4_4:50170524-50170543 None:intergenic 40.0%
CTCTTGCTTACGTATAACCT+CGG + chr4_4:50170561-50170580 None:intergenic 40.0%
ACATCTTGGATTGATGCTCT+TGG + chr4_4:50170599-50170618 None:intergenic 40.0%
! AGAGCATCAATCCAAGATGT+TGG - chr4_4:50170599-50170618 Msa0685890:intron 40.0%
! CCACGAAAAGCATACAAAGT+TGG + chr4_4:50170823-50170842 None:intergenic 40.0%
! CCAACTTTGTATGCTTTTCG+TGG - chr4_4:50170820-50170839 Msa0685890:CDS 40.0%
! TTTGTTGTAGGAGACGTTCT+CGG - chr4_4:50170964-50170983 Msa0685890:CDS 40.0%
AGTTGGAAAGGAAAGAAAGC+CGG + chr4_4:50170995-50171014 None:intergenic 40.0%
GGATTATTATGAAAGTGGGG+AGG - chr4_4:50171056-50171075 Msa0685890:intron 40.0%
CATGTTCAAGAGGGAAAGAT+CGG + chr4_4:50171264-50171283 None:intergenic 40.0%
! CTTTTCCATCCATGTTCAAG+AGG + chr4_4:50171274-50171293 None:intergenic 40.0%
TGGTATCACCATATACCAGA+CGG - chr4_4:50171340-50171359 Msa0685890:CDS 40.0%
TTCAGCTCTGCAAATTCTCA+AGG - chr4_4:50171373-50171392 Msa0685890:CDS 40.0%
AGGACCTTATAACTTGGCTA+TGG - chr4_4:50171403-50171422 Msa0685890:CDS 40.0%
! ATGGCACCTCTAAAGATCAA+TGG - chr4_4:50171422-50171441 Msa0685890:intron 40.0%
! TATGGTACTTTTCTACCGGT+TGG - chr4_4:50171458-50171477 Msa0685890:intron 40.0%
TGAGTGTTTACGAAAGCTTG+TGG - chr4_4:50171664-50171683 Msa0685890:CDS 40.0%
CATAAAGGACAATTGACTGC+AGG + chr4_4:50172097-50172116 None:intergenic 40.0%
GATAAGGAAGGGAAATTTGC+AGG - chr4_4:50172116-50172135 Msa0685890:intron 40.0%
AAGCTCCCAATCAACATTGA+CGG - chr4_4:50172158-50172177 Msa0685890:intron 40.0%
ATTGTCGTTGTGGATGCAAT+AGG - chr4_4:50172188-50172207 Msa0685890:intron 40.0%
AAGCAATAGGTCAGTGACAA+AGG + chr4_4:50172291-50172310 None:intergenic 40.0%
TATGTTATGCAGACTGATCC+TGG - chr4_4:50172317-50172336 Msa0685890:intron 40.0%
CCAAATCCAGCATATACAAC+TGG + chr4_4:50172347-50172366 None:intergenic 40.0%
CCAGTTGTATATGCTGGATT+TGG - chr4_4:50172344-50172363 Msa0685890:intron 40.0%
AAGATATGGGCCTTACAAGA+TGG - chr4_4:50172644-50172663 Msa0685890:intron 40.0%
GACTGTTGTTCCATCTTGTA+AGG + chr4_4:50172657-50172676 None:intergenic 40.0%
GATGGAACAACAGTCGTTAT+TGG - chr4_4:50172662-50172681 Msa0685890:intron 40.0%
GAACAACAGTCGTTATTGGA+GGG - chr4_4:50172666-50172685 Msa0685890:intron 40.0%
CAGAGCAAAGTTAGAGTTTC+CGG - chr4_4:50172697-50172716 Msa0685890:intron 40.0%
CTATTCATCTCCCAAATGAG+GGG + chr4_4:50173077-50173096 None:intergenic 40.0%
!! GCAGTTGATGGTGAATGAGA+GGG + chr4_4:50169242-50169261 None:intergenic 45.0%
!! TGCAGTTGATGGTGAATGAG+AGG + chr4_4:50169243-50169262 None:intergenic 45.0%
TCATCATTCTCCTGTGTGAG+TGG + chr4_4:50169337-50169356 None:intergenic 45.0%
! GCAGGCACTTTTATTGACCA+AGG - chr4_4:50170229-50170248 Msa0685890:intron 45.0%
AAAACTCAGGTTTCTCGCCT+TGG + chr4_4:50170249-50170268 None:intergenic 45.0%
GATGATCTTCAGGGTAGTTC+TGG + chr4_4:50170276-50170295 None:intergenic 45.0%
CCTAACACAGGATGATCTTC+AGG + chr4_4:50170286-50170305 None:intergenic 45.0%
CCTGAAGATCATCCTGTGTT+AGG - chr4_4:50170283-50170302 Msa0685890:intron 45.0%
CTATAAGGGATGCACCAAGA+AGG + chr4_4:50170387-50170406 None:intergenic 45.0%
GAGTTGTGTTGTGTAAGTGC+AGG + chr4_4:50170410-50170429 None:intergenic 45.0%
AACACAACTCCCACTCATCA+AGG - chr4_4:50170420-50170439 Msa0685890:intron 45.0%
CAGCATTTCTTGATCACCCA+GGG - chr4_4:50170498-50170517 Msa0685890:intron 45.0%
CTACGAAACAAATAAGGCCC+TGG + chr4_4:50170518-50170537 None:intergenic 45.0%
!! CAGGGCCTTATTTGTTTCGT+AGG - chr4_4:50170516-50170535 Msa0685890:intron 45.0%
!! GGCCTTATTTGTTTCGTAGG+TGG - chr4_4:50170519-50170538 Msa0685890:intron 45.0%
GGTACTATACTAATGGGAGC+TGG - chr4_4:50170620-50170639 Msa0685890:intron 45.0%
ACTAATGGGAGCTGGATATG+AGG - chr4_4:50170628-50170647 Msa0685890:intron 45.0%
! TATGCTTTTCGTGGACTTGC+CGG - chr4_4:50170829-50170848 Msa0685890:CDS 45.0%
TGCTATATGAACGCCAACAG+GGG + chr4_4:50170863-50170882 None:intergenic 45.0%
GTGCTATATGAACGCCAACA+GGG + chr4_4:50170864-50170883 None:intergenic 45.0%
AGTGCTATATGAACGCCAAC+AGG + chr4_4:50170865-50170884 None:intergenic 45.0%
! GAGGAACTTTAAGTGCTGCA+GGG - chr4_4:50170902-50170921 Msa0685890:CDS 45.0%
ACAACAAAATTCAGCCCCTG+AGG + chr4_4:50170952-50170971 None:intergenic 45.0%
!! CAGGGGCTGAATTTTGTTGT+AGG - chr4_4:50170952-50170971 Msa0685890:CDS 45.0%
GAAAGTGGGGAGGTAAATGT+TGG - chr4_4:50171066-50171085 Msa0685890:intron 45.0%
CGATCTTTCCCTCTTGAACA+TGG - chr4_4:50171262-50171281 Msa0685890:CDS 45.0%
CTTTCCCTCTTGAACATGGA+TGG - chr4_4:50171266-50171285 Msa0685890:CDS 45.0%
TCACCATATACCAGACGGAT+TGG - chr4_4:50171345-50171364 Msa0685890:CDS 45.0%
ACTCCAATCCGTCTGGTATA+TGG + chr4_4:50171351-50171370 None:intergenic 45.0%
CTGAAATACTCCAATCCGTC+TGG + chr4_4:50171358-50171377 None:intergenic 45.0%
! GGTGCCATAGCCAAGTTATA+AGG + chr4_4:50171410-50171429 None:intergenic 45.0%
GGAGAGTTAACATCTCCAAC+CGG + chr4_4:50171476-50171495 None:intergenic 45.0%
AAGGACCACCATTACAGACT+AGG - chr4_4:50171974-50171993 Msa0685890:CDS 45.0%
CAAGTCCTAGTCTGTAATGG+TGG + chr4_4:50171982-50172001 None:intergenic 45.0%
! CTGAGCCGTCAATGTTGATT+GGG + chr4_4:50172166-50172185 None:intergenic 45.0%
TCTGAGCCGTCAATGTTGAT+TGG + chr4_4:50172167-50172186 None:intergenic 45.0%
GGAACAACAGTCGTTATTGG+AGG - chr4_4:50172665-50172684 Msa0685890:intron 45.0%
! CAGGGATTTTGTCAAGCAAG+AGG + chr4_4:50172733-50172752 None:intergenic 45.0%
!!! TTTTTATAAATATCTTAATT+AGG + chr4_4:50169752-50169771 None:intergenic 5.0%
!!! TTCAAAAATAAATTATTTTA+CGG + chr4_4:50169999-50170018 None:intergenic 5.0%
!!! TTTTAATATATAATTAAACA+TGG + chr4_4:50172598-50172617 None:intergenic 5.0%
!!! TTATTTTTATTTTATTTGAT+AGG - chr4_4:50173013-50173032 Msa0685890:CDS 5.0%
!!! TATTTTTATTTTATTTGATA+GGG - chr4_4:50173014-50173033 Msa0685890:CDS 5.0%
TCATTCTCCTGTGTGAGTGG+TGG + chr4_4:50169334-50169353 None:intergenic 50.0%
CCACACCATAAGGACCTTTC+TGG + chr4_4:50169396-50169415 None:intergenic 50.0%
CCAGAAAGGTCCTTATGGTG+TGG - chr4_4:50169393-50169412 Msa0685890:intron 50.0%
CTTGCAATGTTGGCCCTTCT+TGG - chr4_4:50170370-50170389 Msa0685890:intron 50.0%
GCAGCATTTCTTGATCACCC+AGG - chr4_4:50170497-50170516 Msa0685890:intron 50.0%
GTCATTTATCCACTCTGCCG+AGG - chr4_4:50170541-50170560 Msa0685890:intron 50.0%
TACGTATAACCTCGGCAGAG+TGG + chr4_4:50170553-50170572 None:intergenic 50.0%
!! GCACTGCTGTTGATAATGGG+TGG - chr4_4:50170880-50170899 Msa0685890:CDS 50.0%
!! CTGCTGTTGATAATGGGTGG+AGG - chr4_4:50170883-50170902 Msa0685890:CDS 50.0%
! GGAGGAACTTTAAGTGCTGC+AGG - chr4_4:50170901-50170920 Msa0685890:CDS 50.0%
! AGTGCTGCAGGGAGCTTTAA+AGG - chr4_4:50170913-50170932 Msa0685890:CDS 50.0%
GGAAAGGAAAGAAAGCCGGT+AGG + chr4_4:50170991-50171010 None:intergenic 50.0%
CGGCTCAGAAATTGTCGTTG+TGG - chr4_4:50172178-50172197 Msa0685890:intron 50.0%
GTGGATGCAATAGGCAGTAG+TGG - chr4_4:50172197-50172216 Msa0685890:intron 50.0%
TGCAATAGGCAGTAGTGGCT+TGG - chr4_4:50172202-50172221 Msa0685890:intron 50.0%
! CAGTAGTGGCTTGGACTTGA+AGG - chr4_4:50172211-50172230 Msa0685890:intron 50.0%
GTGTGAGCTTAAGCCAAGTC+TGG - chr4_4:50172233-50172252 Msa0685890:intron 50.0%
AGCAAGAGGTTCATCTCGTC+CGG + chr4_4:50172719-50172738 None:intergenic 50.0%
TTCTCCTCCACCACTCACAC+AGG - chr4_4:50169324-50169343 Msa0685890:intron 55.0%
TTCTCCTGTGTGAGTGGTGG+AGG + chr4_4:50169331-50169350 None:intergenic 55.0%
! CTTTTCGTGGACTTGCCGGT+CGG - chr4_4:50170833-50170852 Msa0685890:CDS 55.0%
AGGTTCAGTCACTGTGCCTC+AGG - chr4_4:50170933-50170952 Msa0685890:CDS 55.0%
GGTTCAGTCACTGTGCCTCA+GGG - chr4_4:50170934-50170953 Msa0685890:CDS 55.0%
GTTCAGTCACTGTGCCTCAG+GGG - chr4_4:50170935-50170954 Msa0685890:CDS 55.0%
GCATATACAACTGGCACGCC+AGG + chr4_4:50172338-50172357 None:intergenic 55.0%
GGCGTGCCAGTTGTATATGC+TGG - chr4_4:50172338-50172357 Msa0685890:intron 55.0%
GGAGACGTTCTCGGTCCTAC+CGG - chr4_4:50170973-50170992 Msa0685890:CDS 60.0%
!! GCCAACAGGGGCTAGCCGAC+CGG + chr4_4:50170851-50170870 None:intergenic 70.0%
! GCCGGTCGGCTAGCCCCTGT+TGG - chr4_4:50170847-50170866 Msa0685890:CDS 75.0%
Chromosome Type Strat End Strand Name
chr4_4 gene 50169086 50173151 50169086 ID=Msa0685890;Name=Msa0685890
chr4_4 mRNA 50169086 50173151 50169086 ID=Msa0685890-mRNA-1;Parent=Msa0685890;Name=Msa0685890-mRNA-1;_AED=0.14;_eAED=0.14;_QI=47|0.66|0.7|0.9|1|1|10|0|586
chr4_4 exon 50169086 50169202 50169086 ID=Msa0685890-mRNA-1:exon:12777;Parent=Msa0685890-mRNA-1
chr4_4 exon 50169441 50169590 50169441 ID=Msa0685890-mRNA-1:exon:12776;Parent=Msa0685890-mRNA-1
chr4_4 exon 50169714 50169719 50169714 ID=Msa0685890-mRNA-1:exon:12775;Parent=Msa0685890-mRNA-1
chr4_4 exon 50169825 50169908 50169825 ID=Msa0685890-mRNA-1:exon:12774;Parent=Msa0685890-mRNA-1
chr4_4 exon 50170005 50170161 50170005 ID=Msa0685890-mRNA-1:exon:12773;Parent=Msa0685890-mRNA-1
chr4_4 exon 50170727 50170992 50170727 ID=Msa0685890-mRNA-1:exon:12772;Parent=Msa0685890-mRNA-1
chr4_4 exon 50171160 50171432 50171160 ID=Msa0685890-mRNA-1:exon:12771;Parent=Msa0685890-mRNA-1
chr4_4 exon 50171588 50171699 50171588 ID=Msa0685890-mRNA-1:exon:12770;Parent=Msa0685890-mRNA-1
chr4_4 exon 50171785 50172004 50171785 ID=Msa0685890-mRNA-1:exon:12769;Parent=Msa0685890-mRNA-1
chr4_4 exon 50172729 50173151 50172729 ID=Msa0685890-mRNA-1:exon:12768;Parent=Msa0685890-mRNA-1
chr4_4 five_prime_UTR 50173105 50173151 50173105 ID=Msa0685890-mRNA-1:five_prime_utr;Parent=Msa0685890-mRNA-1
chr4_4 CDS 50172729 50173104 50172729 ID=Msa0685890-mRNA-1:cds;Parent=Msa0685890-mRNA-1
chr4_4 CDS 50171785 50172004 50171785 ID=Msa0685890-mRNA-1:cds;Parent=Msa0685890-mRNA-1
chr4_4 CDS 50171588 50171699 50171588 ID=Msa0685890-mRNA-1:cds;Parent=Msa0685890-mRNA-1
chr4_4 CDS 50171160 50171432 50171160 ID=Msa0685890-mRNA-1:cds;Parent=Msa0685890-mRNA-1
chr4_4 CDS 50170727 50170992 50170727 ID=Msa0685890-mRNA-1:cds;Parent=Msa0685890-mRNA-1
chr4_4 CDS 50170005 50170161 50170005 ID=Msa0685890-mRNA-1:cds;Parent=Msa0685890-mRNA-1
chr4_4 CDS 50169825 50169908 50169825 ID=Msa0685890-mRNA-1:cds;Parent=Msa0685890-mRNA-1
chr4_4 CDS 50169714 50169719 50169714 ID=Msa0685890-mRNA-1:cds;Parent=Msa0685890-mRNA-1
chr4_4 CDS 50169441 50169590 50169441 ID=Msa0685890-mRNA-1:cds;Parent=Msa0685890-mRNA-1
chr4_4 CDS 50169086 50169202 50169086 ID=Msa0685890-mRNA-1:cds;Parent=Msa0685890-mRNA-1
Gene Sequence

>Msa0685890

ATGTGTCACATGATGTCTTTGAGGACTCCTATGAATCAATGTCTTCTCAAAGTTCCCACTTTTCATCCCTTGTTCAAATTCAACAGAACTCATACTCATCATAACACCCTCTCATTCACCATCAACTGCAACCTCAAAAACAAGGGAAAGAATAATAACTTGTTGTCACAGAAGATTGTTTTATCAGAATCTTCTCCTCCACCACTCACACAGGAGAATGATGATATCAACAGTGGAAATGTTCCAGTAAGCTCAAAGAACCAGAAAGGTCCTTATGGTGTGGTCAAGAAGTTGAGTAAAAAGGTGTTGCAGATTCTCTCTAATTTGCCTTTGGCTATTGGAGAAATGTTCACCATTGCTTTTTTAATGGGTTTGGGCACTTTTATTGACCAAGGCGAGAAACCTGAGTTTTATTTCCAGAACTACCCTGAAGATCATCCTGTGTTAGGATTTTTTACTTGGAGATGGATTTTCTTCCTTGGTTTCGATCACATGTATTCAGCCCCTATATTTCTTGCAATGTTGGCCCTTCTTGGTGCATCCCTTATAGCCTGCACTTACACAACACAACTCCCACTCATCAAGGTTTCAAAAAGGTGGTCATTTATCCACTCTGCCGAGGTTATACGTAAGCAAGAGTTTTCAGAATCATTGCCAAGAGCATCAATCCAAGATGTTGGTACTATACTAATGGGAGCTGGATATGAGGTATTCTTGAAAGGACCAACTTTGTATGCTTTTCGTGGACTTGCCGGTCGGCTAGCCCCTGTTGGCGTTCATATAGCACTGCTGTTGATAATGGGTGGAGGAACTTTAAGTGCTGCAGGGAGCTTTAAAGGTTCAGTCACTGTGCCTCAGGGGCTGAATTTTGTTGTAGGAGACGTTCTCGGTCCTACCGGCTTTCTTTCCTTTCCAACTGATGCTTTTAATACAGAGATTCATGTCAACAGATTCTCTATGGATTATTATGAAAGTGGGGAGGTTTCACAGTTTCACACCGATCTTTCCCTCTTGAACATGGATGGAAAAGAAGTAATGAGGAAAACAATTAGTGTAAACGACCCTTTAAGATATGATGGTATCACCATATACCAGACGGATTGGAGTATTTCAGCTCTGCAAATTCTCAAGGACAATGAAGGACCTTATAACTTGGCTATGGCACCTCTAAAGATCAATGGAGATAAGAAACTTTATGGTACTTTTCTACCGGTTGGAGATGTTAACTCTCCTGATGTTAAAGGAATATCTATGCTTGCTCGTGACCTGCAGTCAATTGTCCTTTATGATAAGGAAGGGAAATTTGCAGGAGTTAGACGACCTAATTCAAAGCTCCCAATCAACATTGACGGCTCAGAAATTGTCGTTGTGGATGCAATAGGCAGTAGTGGCTTGGACTTGAAGACTGATCCTGGCGTGCCAGTTGTATATGCTGGATTTGGTGCTCTCATGCTCACTACTTGCATCAGCTATTTATCTCATTCACAGACAAATATATGGGCCTTACAAGATGGAACAACAGTCGTTATTGGAGGGAAGACTAACAGAGCAAAGTTAGAGTTTCCGGACGAGATGAACCTCTTGCTTGACAAAATCCCTGAAATAGTTGAATCATCATCTCTATCTAAGCAAACTGATAGCATGGGCCAGATACCAAAGTTCTTATGTCTTGTATCATTTTTGCCCCTCATTTGGGAGATGAATAGTATCTTTGCTATTTGGTATGTCCATAATGTACAGTTTGCAGTTGCAACTAAATAA

Protein sequence

>Msa0685890

MCHMMSLRTPMNQCLLKVPTFHPLFKFNRTHTHHNTLSFTINCNLKNKGKNNNLLSQKIVLSESSPPPLTQENDDINSGNVPVSSKNQKGPYGVVKKLSKKVLQILSNLPLAIGEMFTIAFLMGLGTFIDQGEKPEFYFQNYPEDHPVLGFFTWRWIFFLGFDHMYSAPIFLAMLALLGASLIACTYTTQLPLIKVSKRWSFIHSAEVIRKQEFSESLPRASIQDVGTILMGAGYEVFLKGPTLYAFRGLAGRLAPVGVHIALLLIMGGGTLSAAGSFKGSVTVPQGLNFVVGDVLGPTGFLSFPTDAFNTEIHVNRFSMDYYESGEVSQFHTDLSLLNMDGKEVMRKTISVNDPLRYDGITIYQTDWSISALQILKDNEGPYNLAMAPLKINGDKKLYGTFLPVGDVNSPDVKGISMLARDLQSIVLYDKEGKFAGVRRPNSKLPINIDGSEIVVVDAIGSSGLDLKTDPGVPVVYAGFGALMLTTCISYLSHSQTNIWALQDGTTVVIGGKTNRAKLEFPDEMNLLLDKIPEIVESSSLSKQTDSMGQIPKFLCLVSFLPLIWEMNSIFAIWYVHNVQFAVATK*