Alfalfa Gene Editing Database
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0685890 | XP_013456369.1 | 96.539 | 549 | 16 | 2 | 1 | 548 | 1 | 547 | 0.0 | 1086 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0685890 | sp|Q9XIA4|CCS1_ARATH | 66.850 | 546 | 167 | 5 | 11 | 545 | 5 | 547 | 0.0 | 751 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0685890 | A0A072UX27 | 96.539 | 549 | 16 | 2 | 1 | 548 | 1 | 547 | 0.0 | 1086 |
Gene ID | Type | Classification |
---|
Gene ID | Type | Classification |
---|
Co-expression Network
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
Msa0000780 | Msa0685890 | 0.817215 | 3.702357e-52 | -8.615850e-47 |
Msa0004340 | Msa0685890 | 0.824121 | 9.583403e-54 | -8.615850e-47 |
Msa0008250 | Msa0685890 | 0.810618 | 1.054154e-50 | -8.615850e-47 |
Msa0012380 | Msa0685890 | 0.859892 | 3.020257e-63 | -8.615850e-47 |
Msa0014410 | Msa0685890 | 0.829190 | 5.913550e-55 | -8.615850e-47 |
Msa0017130 | Msa0685890 | 0.803228 | 3.853048e-49 | -8.615850e-47 |
Msa0024900 | Msa0685890 | 0.814452 | 1.529987e-51 | -8.615850e-47 |
Msa0026110 | Msa0685890 | 0.822109 | 2.824222e-53 | -8.615850e-47 |
Msa0028950 | Msa0685890 | 0.808026 | 3.790369e-50 | -8.615850e-47 |
Msa0034940 | Msa0685890 | 0.800929 | 1.144488e-48 | -8.615850e-47 |
Msa0040550 | Msa0685890 | -0.826139 | 3.196481e-54 | -8.615850e-47 |
Msa0040780 | Msa0685890 | 0.813264 | 2.794402e-51 | -8.615850e-47 |
Msa0044180 | Msa0685890 | 0.848615 | 5.475190e-60 | -8.615850e-47 |
Msa0045660 | Msa0685890 | 0.804153 | 2.476146e-49 | -8.615850e-47 |
Msa0046360 | Msa0685890 | 0.811108 | 8.255608e-51 | -8.615850e-47 |
Msa0057530 | Msa0685890 | 0.806327 | 8.681879e-50 | -8.615850e-47 |
Msa0064550 | Msa0685890 | 0.863040 | 3.305367e-64 | -8.615850e-47 |
Msa0065690 | Msa0685890 | 0.803497 | 3.388727e-49 | -8.615850e-47 |
Msa0072830 | Msa0685890 | 0.838171 | 3.369931e-57 | -8.615850e-47 |
Msa0072860 | Msa0685890 | 0.837697 | 4.459746e-57 | -8.615850e-47 |
Msa0081120 | Msa0685890 | 0.818438 | 1.959963e-52 | -8.615850e-47 |
Msa0089510 | Msa0685890 | 0.808186 | 3.505192e-50 | -8.615850e-47 |
Msa0089520 | Msa0685890 | 0.806784 | 6.954136e-50 | -8.615850e-47 |
Msa0090860 | Msa0685890 | 0.822552 | 2.228251e-53 | -8.615850e-47 |
Msa0091470 | Msa0685890 | 0.856232 | 3.698605e-62 | -8.615850e-47 |
Msa0108070 | Msa0685890 | 0.840808 | 6.958204e-58 | -8.615850e-47 |
Msa0109490 | Msa0685890 | 0.840288 | 9.517744e-58 | -8.615850e-47 |
Msa0114700 | Msa0685890 | 0.837548 | 4.871482e-57 | -8.615850e-47 |
Msa0116510 | Msa0685890 | 0.802127 | 6.501915e-49 | -8.615850e-47 |
Msa0604880 | Msa0685890 | 0.845938 | 2.972260e-59 | -8.615850e-47 |
Msa0605250 | Msa0685890 | 0.914613 | 1.560735e-84 | -8.615850e-47 |
Msa0608780 | Msa0685890 | 0.827862 | 1.237786e-54 | -8.615850e-47 |
Msa0609790 | Msa0685890 | 0.838162 | 3.386553e-57 | -8.615850e-47 |
Msa0610780 | Msa0685890 | 0.832757 | 7.880174e-56 | -8.615850e-47 |
Msa0610810 | Msa0685890 | 0.836051 | 1.173936e-56 | -8.615850e-47 |
Msa0612730 | Msa0685890 | 0.800862 | 1.181121e-48 | -8.615850e-47 |
Msa0615430 | Msa0685890 | 0.822890 | 1.859300e-53 | -8.615850e-47 |
Msa0619390 | Msa0685890 | 0.804018 | 2.641857e-49 | -8.615850e-47 |
Msa0622250 | Msa0685890 | 0.886475 | 3.312300e-72 | -8.615850e-47 |
Msa0622690 | Msa0685890 | 0.808906 | 2.460034e-50 | -8.615850e-47 |
Msa0623270 | Msa0685890 | 0.830950 | 2.200655e-55 | -8.615850e-47 |
Msa0624040 | Msa0685890 | 0.807228 | 5.601153e-50 | -8.615850e-47 |
Msa0627050 | Msa0685890 | 0.890023 | 1.432848e-73 | -8.615850e-47 |
Msa0629820 | Msa0685890 | 0.822929 | 1.821002e-53 | -8.615850e-47 |
Msa0629980 | Msa0685890 | 0.820599 | 6.300786e-53 | -8.615850e-47 |
Msa0636720 | Msa0685890 | 0.843652 | 1.228584e-58 | -8.615850e-47 |
Msa0644630 | Msa0685890 | 0.841660 | 4.154023e-58 | -8.615850e-47 |
Msa0645040 | Msa0685890 | 0.811983 | 5.329043e-51 | -8.615850e-47 |
Msa0645410 | Msa0685890 | 0.825208 | 5.312676e-54 | -8.615850e-47 |
Msa0646190 | Msa0685890 | 0.890319 | 1.097441e-73 | -8.615850e-47 |
Msa0646340 | Msa0685890 | 0.920068 | 2.042061e-87 | -8.615850e-47 |
Msa0648560 | Msa0685890 | 0.804641 | 1.959291e-49 | -8.615850e-47 |
Msa0649250 | Msa0685890 | 0.828622 | 8.113411e-55 | -8.615850e-47 |
Msa0649310 | Msa0685890 | 0.832799 | 7.691292e-56 | -8.615850e-47 |
Msa0650360 | Msa0685890 | 0.821658 | 3.592274e-53 | -8.615850e-47 |
Msa0651310 | Msa0685890 | 0.849339 | 3.445657e-60 | -8.615850e-47 |
Msa0654880 | Msa0685890 | 0.843517 | 1.335056e-58 | -8.615850e-47 |
Msa0660070 | Msa0685890 | 0.803674 | 3.114090e-49 | -8.615850e-47 |
Msa0675010 | Msa0685890 | 0.864851 | 9.029005e-65 | -8.615850e-47 |
Msa0679780 | Msa0685890 | 0.803932 | 2.753160e-49 | -8.615850e-47 |
Msa0681210 | Msa0685890 | 0.830549 | 2.758299e-55 | -8.615850e-47 |
Msa0684520 | Msa0685890 | 0.829985 | 3.788292e-55 | -8.615850e-47 |
Msa0685890 | Msa0688110 | 0.831186 | 1.925396e-55 | -8.615850e-47 |
Msa0685890 | Msa0693400 | 0.850219 | 1.956308e-60 | -8.615850e-47 |
Msa0685890 | Msa0693500 | 0.828779 | 7.437889e-55 | -8.615850e-47 |
Msa0685890 | Msa0698480 | 0.821227 | 4.517341e-53 | -8.615850e-47 |
Msa0685890 | Msa0698650 | 0.825550 | 4.410628e-54 | -8.615850e-47 |
Msa0685890 | Msa0702560 | 0.808024 | 3.794708e-50 | -8.615850e-47 |
Msa0685890 | Msa0705810 | 0.836375 | 9.710327e-57 | -8.615850e-47 |
Msa0685890 | Msa0706450 | 0.801553 | 8.527533e-49 | -8.615850e-47 |
Msa0685890 | Msa0727300 | 0.815928 | 7.190372e-52 | -8.615850e-47 |
Msa0685890 | Msa0738950 | 0.802793 | 4.738595e-49 | -8.615850e-47 |
Msa0685890 | Msa0742090 | 0.808977 | 2.375294e-50 | -8.615850e-47 |
Msa0685890 | Msa0748330 | 0.882705 | 8.322158e-71 | -8.615850e-47 |
Msa0685890 | Msa0748980 | 0.803569 | 3.274136e-49 | -8.615850e-47 |
Msa0685890 | Msa0749150 | 0.835380 | 1.735948e-56 | -8.615850e-47 |
Msa0685890 | Msa0756470 | 0.806982 | 6.312958e-50 | -8.615850e-47 |
Msa0685890 | Msa0769830 | 0.809719 | 1.646815e-50 | -8.615850e-47 |
Msa0685890 | Msa0775580 | 0.830865 | 2.308025e-55 | -8.615850e-47 |
Msa0685890 | Msa0780140 | 0.830630 | 2.635484e-55 | -8.615850e-47 |
Msa0685890 | Msa0781390 | 0.810201 | 1.296632e-50 | -8.615850e-47 |
Msa0685890 | Msa0786100 | 0.830134 | 3.484425e-55 | -8.615850e-47 |
Msa0685890 | Msa0789800 | 0.819827 | 9.464535e-53 | -8.615850e-47 |
Msa0685890 | Msa0790640 | 0.849806 | 2.552503e-60 | -8.615850e-47 |
Msa0685890 | Msa0792880 | 0.825339 | 4.948604e-54 | -8.615850e-47 |
Msa0685890 | Msa0793100 | 0.857246 | 1.860042e-62 | -8.615850e-47 |
Msa0685890 | Msa0803530 | 0.808894 | 2.475090e-50 | -8.615850e-47 |
Msa0685890 | Msa0806720 | 0.867018 | 1.864576e-65 | -8.615850e-47 |
Msa0685890 | Msa0806760 | 0.863578 | 2.251885e-64 | -8.615850e-47 |
Msa0685890 | Msa0812970 | 0.854482 | 1.195387e-61 | -8.615850e-47 |
Msa0685890 | Msa0813030 | 0.809781 | 1.596749e-50 | -8.615850e-47 |
Msa0685890 | Msa0819440 | 0.814537 | 1.464590e-51 | -8.615850e-47 |
Msa0685890 | Msa0823310 | 0.800092 | 1.695260e-48 | -8.615850e-47 |
Msa0685890 | Msa0824140 | 0.821507 | 3.892069e-53 | -8.615850e-47 |
Msa0685890 | Msa0828570 | 0.814436 | 1.542002e-51 | -8.615850e-47 |
Msa0685890 | Msa0828900 | 0.831411 | 1.695037e-55 | -8.615850e-47 |
Msa0685890 | Msa0829570 | 0.800831 | 1.198461e-48 | -8.615850e-47 |
Msa0685890 | Msa0848760 | 0.812913 | 3.337702e-51 | -8.615850e-47 |
Msa0685890 | Msa0853500 | 0.813773 | 2.159580e-51 | -8.615850e-47 |
Msa0685890 | Msa0863250 | 0.826714 | 2.331165e-54 | -8.615850e-47 |
Msa0685890 | Msa0864730 | 0.801125 | 1.043674e-48 | -8.615850e-47 |
Msa0685890 | Msa0864750 | 0.801634 | 8.207947e-49 | -8.615850e-47 |
Msa0685890 | Msa0876270 | 0.824652 | 7.186815e-54 | -8.615850e-47 |
Msa0685890 | Msa0879650 | 0.830615 | 2.658229e-55 | -8.615850e-47 |
Msa0685890 | Msa0882430 | -0.804836 | 1.784240e-49 | -8.615850e-47 |
Msa0685890 | Msa0882700 | 0.854286 | 1.361734e-61 | -8.615850e-47 |
Msa0685890 | Msa0888900 | 0.812559 | 3.988535e-51 | -8.615850e-47 |
Msa0685890 | Msa0899700 | 0.815185 | 1.052270e-51 | -8.615850e-47 |
Msa0685890 | Msa0904630 | 0.820175 | 7.882301e-53 | -8.615850e-47 |
Msa0685890 | Msa0909720 | 0.859126 | 5.129396e-63 | -8.615850e-47 |
Msa0685890 | Msa0911910 | 0.804313 | 2.293175e-49 | -8.615850e-47 |
Msa0685890 | Msa0912110 | 0.810754 | 9.848637e-51 | -8.615850e-47 |
Msa0685890 | Msa0915550 | 0.810032 | 1.409854e-50 | -8.615850e-47 |
Msa0685890 | Msa0936650 | 0.842158 | 3.067799e-58 | -8.615850e-47 |
Msa0685890 | Msa0936690 | 0.807780 | 4.277150e-50 | -8.615850e-47 |
Msa0685890 | Msa0938370 | 0.811699 | 6.144962e-51 | -8.615850e-47 |
Msa0685890 | Msa0944690 | 0.845736 | 3.372141e-59 | -8.615850e-47 |
Msa0685890 | Msa0945960 | 0.860386 | 2.142222e-63 | -8.615850e-47 |
Msa0685890 | Msa0964680 | 0.804881 | 1.745538e-49 | -8.615850e-47 |
Msa0685890 | Msa0966360 | 0.801128 | 1.041992e-48 | -8.615850e-47 |
Msa0685890 | Msa0968780 | 0.896806 | 2.590230e-76 | -8.615850e-47 |
Msa0685890 | Msa0970050 | 0.807685 | 4.479719e-50 | -8.615850e-47 |
Msa0685890 | Msa0973890 | 0.836016 | 1.198169e-56 | -8.615850e-47 |
Msa0685890 | Msa0980980 | 0.817824 | 2.698168e-52 | -8.615850e-47 |
Msa0685890 | Msa0984000 | 0.891743 | 3.006857e-74 | -8.615850e-47 |
Msa0685890 | Msa1004210 | 0.812591 | 3.924807e-51 | -8.615850e-47 |
Msa0685890 | Msa1014350 | 0.804586 | 2.011672e-49 | -8.615850e-47 |
Msa0685890 | Msa1031150 | 0.847947 | 8.373794e-60 | -8.615850e-47 |
Msa0685890 | Msa1034930 | 0.833913 | 4.057099e-56 | -8.615850e-47 |
Msa0685890 | Msa1035510 | 0.807264 | 5.503074e-50 | -8.615850e-47 |
Msa0685890 | Msa1036250 | 0.848014 | 8.026076e-60 | -8.615850e-47 |
Msa0685890 | Msa1040390 | 0.852682 | 3.932591e-61 | -8.615850e-47 |
Msa0685890 | Msa1043020 | 0.811922 | 5.493382e-51 | -8.615850e-47 |
Msa0685890 | Msa1046610 | 0.803072 | 4.149914e-49 | -8.615850e-47 |
Msa0685890 | Msa1053690 | 0.820362 | 7.139834e-53 | -8.615850e-47 |
Msa0685890 | Msa1055360 | 0.800660 | 1.298876e-48 | -8.615850e-47 |
Msa0685890 | Msa1057300 | 0.809541 | 1.798644e-50 | -8.615850e-47 |
Msa0685890 | Msa1068880 | 0.825943 | 3.557304e-54 | -8.615850e-47 |
Msa0685890 | Msa1070250 | 0.832860 | 7.425655e-56 | -8.615850e-47 |
Msa0685890 | Msa1075420 | 0.820503 | 6.626153e-53 | -8.615850e-47 |
Msa0685890 | Msa1076520 | 0.836451 | 9.285395e-57 | -8.615850e-47 |
Msa0685890 | Msa1078600 | 0.817328 | 3.490464e-52 | -8.615850e-47 |
Msa0685890 | Msa1078770 | 0.809521 | 1.816407e-50 | -8.615850e-47 |
Msa0685890 | Msa1079480 | 0.865848 | 4.383317e-65 | -8.615850e-47 |
Msa0685890 | Msa1080840 | 0.818759 | 1.657375e-52 | -8.615850e-47 |
Msa0685890 | Msa1082150 | 0.905962 | 2.462683e-80 | -8.615850e-47 |
Msa0685890 | Msa1083140 | 0.857691 | 1.373149e-62 | -8.615850e-47 |
Msa0685890 | Msa1091230 | 0.802399 | 5.715287e-49 | -8.615850e-47 |
Msa0685890 | Msa1093390 | 0.809929 | 1.483982e-50 | -8.615850e-47 |
Msa0685890 | Msa1096510 | 0.817971 | 2.499911e-52 | -8.615850e-47 |
Msa0685890 | Msa1096520 | 0.807982 | 3.874405e-50 | -8.615850e-47 |
Msa0685890 | Msa1096570 | 0.812353 | 4.423803e-51 | -8.615850e-47 |
Msa0685890 | Msa1118460 | 0.811338 | 7.359492e-51 | -8.615850e-47 |
Msa0685890 | Msa1118980 | 0.824710 | 6.963628e-54 | -8.615850e-47 |
Msa0685890 | Msa1119570 | 0.831353 | 1.751718e-55 | -8.615850e-47 |
Msa0685890 | Msa1122720 | 0.843205 | 1.616814e-58 | -8.615850e-47 |
Msa0685890 | Msa1127900 | 0.830041 | 3.671814e-55 | -8.615850e-47 |
Msa0685890 | Msa1127910 | -0.800014 | 1.758231e-48 | -8.615850e-47 |
Msa0685890 | Msa1130730 | 0.802085 | 6.630692e-49 | -8.615850e-47 |
Msa0685890 | Msa1131900 | 0.871101 | 8.832333e-67 | -8.615850e-47 |
Msa0685890 | Msa1137940 | 0.808870 | 2.503713e-50 | -8.615850e-47 |
Msa0685890 | Msa1138450 | 0.800839 | 1.193794e-48 | -8.615850e-47 |
Msa0685890 | Msa1144730 | 0.893974 | 3.810739e-75 | -8.615850e-47 |
Msa0685890 | Msa1144950 | 0.804967 | 1.675508e-49 | -8.615850e-47 |
Msa0685890 | Msa1151820 | 0.805026 | 1.628523e-49 | -8.615850e-47 |
Msa0685890 | Msa1157030 | 0.813879 | 2.046447e-51 | -8.615850e-47 |
Msa0685890 | Msa1158090 | 0.817033 | 4.067789e-52 | -8.615850e-47 |
Msa0685890 | Msa1162330 | 0.814664 | 1.373028e-51 | -8.615850e-47 |
Msa0685890 | Msa1163050 | 0.820601 | 6.292878e-53 | -8.615850e-47 |
Msa0685890 | Msa1165810 | 0.845734 | 3.376540e-59 | -8.615850e-47 |
Msa0685890 | Msa1166960 | 0.812668 | 3.776244e-51 | -8.615850e-47 |
Msa0685890 | Msa1169600 | 0.805425 | 1.343323e-49 | -8.615850e-47 |
Msa0685890 | Msa1173380 | 0.877459 | 6.179721e-69 | -8.615850e-47 |
Msa0685890 | Msa1177240 | 0.812083 | 5.068551e-51 | -8.615850e-47 |
Msa0685890 | Msa1177960 | 0.817576 | 3.069519e-52 | -8.615850e-47 |
Msa0685890 | Msa1178120 | 0.806425 | 8.277745e-50 | -8.615850e-47 |
Msa0685890 | Msa1180050 | 0.818162 | 2.263945e-52 | -8.615850e-47 |
Msa0685890 | Msa1181510 | 0.853577 | 2.179458e-61 | -8.615850e-47 |
Msa0685890 | Msa1181520 | 0.802032 | 6.800202e-49 | -8.615850e-47 |
Msa0685890 | Msa1182800 | 0.839928 | 1.181469e-57 | -8.615850e-47 |
Msa0685890 | Msa1182830 | 0.839743 | 1.319762e-57 | -8.615850e-47 |
Msa0685890 | Msa1184010 | 0.846598 | 1.964041e-59 | -8.615850e-47 |
Msa0685890 | Msa1209790 | 0.808744 | 2.664593e-50 | -8.615850e-47 |
Msa0685890 | Msa1209800 | 0.821904 | 3.150940e-53 | -8.615850e-47 |
Msa0685890 | Msa1219060 | 0.838143 | 3.425408e-57 | -8.615850e-47 |
Msa0685890 | Msa1220680 | 0.824235 | 9.010835e-54 | -8.615850e-47 |
Msa0685890 | Msa1222580 | 0.807871 | 4.090335e-50 | -8.615850e-47 |
Msa0685890 | Msa1224820 | 0.813242 | 2.826340e-51 | -8.615850e-47 |
Msa0685890 | Msa1226880 | 0.814058 | 1.869340e-51 | -8.615850e-47 |
Msa0685890 | Msa1228350 | 0.836284 | 1.024327e-56 | -8.615850e-47 |
Msa0685890 | Msa1228460 | 0.811691 | 6.169790e-51 | -8.615850e-47 |
Msa0685890 | Msa1232270 | 0.810879 | 9.254109e-51 | -8.615850e-47 |
Msa0685890 | Msa1233770 | 0.805432 | 1.338763e-49 | -8.615850e-47 |
Msa0685890 | Msa1236860 | 0.819363 | 1.208249e-52 | -8.615850e-47 |
Msa0685890 | Msa1237750 | 0.822840 | 1.910381e-53 | -8.615850e-47 |
Msa0685890 | Msa1239900 | 0.856223 | 3.718873e-62 | -8.615850e-47 |
Msa0685890 | Msa1255020 | 0.833262 | 5.900917e-56 | -8.615850e-47 |
Msa0685890 | Msa1259470 | 0.806392 | 8.411913e-50 | -8.615850e-47 |
Msa0685890 | Msa1260760 | 0.807250 | 5.541613e-50 | -8.615850e-47 |
Msa0685890 | Msa1270770 | 0.811509 | 6.756681e-51 | -8.615850e-47 |
Msa0685890 | Msa1272950 | 0.811687 | 6.180999e-51 | -8.615850e-47 |
Msa0685890 | Msa1276080 | 0.801496 | 8.759092e-49 | -8.615850e-47 |
Msa0685890 | Msa1281270 | 0.862787 | 3.955958e-64 | -8.615850e-47 |
Msa0685890 | Msa1293050 | 0.815600 | 8.509286e-52 | -8.615850e-47 |
Msa0685890 | Msa1295470 | 0.824820 | 6.559589e-54 | -8.615850e-47 |
Msa0685890 | Msa1312100 | 0.803216 | 3.874507e-49 | -8.615850e-47 |
Msa0685890 | Msa1317030 | 0.804860 | 1.763743e-49 | -8.615850e-47 |
Msa0685890 | Msa1317240 | 0.805974 | 1.030262e-49 | -8.615850e-47 |
Msa0685890 | Msa1318180 | 0.836007 | 1.204109e-56 | -8.615850e-47 |
Msa0685890 | Msa1320380 | 0.862753 | 4.053104e-64 | -8.615850e-47 |
Msa0685890 | Msa1332690 | 0.802885 | 4.535702e-49 | -8.615850e-47 |
Msa0685890 | Msa1338180 | 0.811913 | 5.518165e-51 | -8.615850e-47 |
Msa0685890 | Msa1338590 | 0.845951 | 2.947058e-59 | -8.615850e-47 |
Msa0685890 | Msa1343450 | 0.800293 | 1.542626e-48 | -8.615850e-47 |
Msa0685890 | Msa1348240 | 0.816819 | 4.543116e-52 | -8.615850e-47 |
Msa0685890 | Msa1349810 | 0.874766 | 5.225584e-68 | -8.615850e-47 |
Msa0685890 | Msa1354090 | 0.829576 | 4.766108e-55 | -8.615850e-47 |
Msa0685890 | Msa1358340 | 0.895094 | 1.327679e-75 | -8.615850e-47 |
Msa0685890 | Msa1359890 | 0.880296 | 6.168774e-70 | -8.615850e-47 |
Msa0685890 | Msa1368150 | 0.807534 | 4.824072e-50 | -8.615850e-47 |
Msa0685890 | Msa1369180 | 0.828818 | 7.274785e-55 | -8.615850e-47 |
Msa0685890 | Msa1371840 | 0.805219 | 1.483705e-49 | -8.615850e-47 |
Msa0685890 | Msa1373390 | 0.824978 | 6.021405e-54 | -8.615850e-47 |
Msa0685890 | Msa1375780 | 0.848127 | 7.472797e-60 | -8.615850e-47 |
Msa0685890 | Msa1376350 | 0.811074 | 8.396537e-51 | -8.615850e-47 |
Msa0685890 | Msa1380720 | 0.836783 | 7.642630e-57 | -8.615850e-47 |
Msa0685890 | Msa1384620 | 0.800877 | 1.172726e-48 | -8.615850e-47 |
Msa0685890 | Msa1388610 | 0.824474 | 7.916885e-54 | -8.615850e-47 |
Msa0685890 | Msa1393550 | 0.803660 | 3.135226e-49 | -8.615850e-47 |
Msa0685890 | Msa1394900 | 0.909763 | 3.971993e-82 | -8.615850e-47 |
Msa0685890 | Msa1404690 | 0.846549 | 2.025611e-59 | -8.615850e-47 |
Msa0685890 | Msa1405380 | 0.829284 | 5.611494e-55 | -8.615850e-47 |
Msa0685890 | Msa1406020 | 0.866824 | 2.148608e-65 | -8.615850e-47 |
Msa0685890 | Msa1420520 | 0.824479 | 7.893149e-54 | -8.615850e-47 |
Msa0685890 | Msa1421870 | 0.819079 | 1.401927e-52 | -8.615850e-47 |
Msa0685890 | Msa1422890 | 0.808581 | 2.886475e-50 | -8.615850e-47 |
Msa0685890 | Msa1426310 | 0.803160 | 3.980958e-49 | -8.615850e-47 |
Msa0685890 | Msa1430760 | 0.804334 | 2.270606e-49 | -8.615850e-47 |
Msa0685890 | Msa1434660 | 0.843615 | 1.256457e-58 | -8.615850e-47 |
Msa0685890 | Msa1440980 | 0.806747 | 7.078409e-50 | -8.615850e-47 |
Msa0685890 | Msa1450780 | 0.804135 | 2.497497e-49 | -8.615850e-47 |
Msa0685890 | Msa1451480 | 0.803249 | 3.815655e-49 | -8.615850e-47 |
Msa0685890 | Msa1453540 | 0.812457 | 4.199066e-51 | -8.615850e-47 |
Msa0685890 | Msa1456620 | 0.855012 | 8.393422e-62 | -8.615850e-47 |
Msa0685890 | Msa1459540 | 0.884823 | 1.379867e-71 | -8.615850e-47 |
Msa0685890 | Msa1462600 | 0.837064 | 6.480257e-57 | -8.615850e-47 |
Msa0121800 | Msa0685890 | 0.843871 | 1.073540e-58 | -8.615850e-47 |
Msa0127080 | Msa0685890 | 0.800766 | 1.235387e-48 | -8.615850e-47 |
Msa0140290 | Msa0685890 | 0.862001 | 6.903859e-64 | -8.615850e-47 |
Msa0154220 | Msa0685890 | 0.838473 | 2.816866e-57 | -8.615850e-47 |
Msa0154240 | Msa0685890 | 0.873250 | 1.700318e-67 | -8.615850e-47 |
Msa0154270 | Msa0685890 | 0.884685 | 1.552182e-71 | -8.615850e-47 |
Msa0155610 | Msa0685890 | 0.825246 | 5.204207e-54 | -8.615850e-47 |
Msa0159750 | Msa0685890 | 0.800020 | 1.753151e-48 | -8.615850e-47 |
Msa0166570 | Msa0685890 | 0.847259 | 1.294616e-59 | -8.615850e-47 |
Msa0168960 | Msa0685890 | 0.800599 | 1.336421e-48 | -8.615850e-47 |
Msa0171920 | Msa0685890 | 0.897484 | 1.344135e-76 | -8.615850e-47 |
Msa0176710 | Msa0685890 | 0.806157 | 9.428150e-50 | -8.615850e-47 |
Msa0178940 | Msa0685890 | 0.802140 | 6.462572e-49 | -8.615850e-47 |
Msa0183560 | Msa0685890 | 0.827658 | 1.385424e-54 | -8.615850e-47 |
Msa0184510 | Msa0685890 | 0.811231 | 7.765365e-51 | -8.615850e-47 |
Msa0187980 | Msa0685890 | 0.836397 | 9.582787e-57 | -8.615850e-47 |
Msa0197030 | Msa0685890 | 0.859949 | 2.902333e-63 | -8.615850e-47 |
Msa0199740 | Msa0685890 | 0.871448 | 6.783772e-67 | -8.615850e-47 |
Msa0202740 | Msa0685890 | 0.823427 | 1.393408e-53 | -8.615850e-47 |
Msa0212730 | Msa0685890 | 0.802247 | 6.141469e-49 | -8.615850e-47 |
Msa0216220 | Msa0685890 | 0.805725 | 1.162029e-49 | -8.615850e-47 |
Msa0224370 | Msa0685890 | 0.853677 | 2.040250e-61 | -8.615850e-47 |
Msa0224400 | Msa0685890 | 0.862391 | 5.238569e-64 | -8.615850e-47 |
Msa0233200 | Msa0685890 | 0.813405 | 2.602959e-51 | -8.615850e-47 |
Msa0238540 | Msa0685890 | 0.811250 | 7.692167e-51 | -8.615850e-47 |
Msa0369100 | Msa0685890 | 0.812899 | 3.361207e-51 | -8.615850e-47 |
Msa0373130 | Msa0685890 | 0.818484 | 1.913968e-52 | -8.615850e-47 |
Msa0373220 | Msa0685890 | 0.821667 | 3.574044e-53 | -8.615850e-47 |
Msa0377280 | Msa0685890 | 0.830428 | 2.954072e-55 | -8.615850e-47 |
Msa0380520 | Msa0685890 | 0.801266 | 9.762373e-49 | -8.615850e-47 |
Msa0380650 | Msa0685890 | 0.865402 | 6.060937e-65 | -8.615850e-47 |
Msa0382590 | Msa0685890 | 0.830983 | 2.159818e-55 | -8.615850e-47 |
Msa0387970 | Msa0685890 | 0.858182 | 9.817509e-63 | -8.615850e-47 |
Msa0389060 | Msa0685890 | 0.811242 | 7.721254e-51 | -8.615850e-47 |
Msa0392050 | Msa0685890 | 0.893819 | 4.405304e-75 | -8.615850e-47 |
Msa0392540 | Msa0685890 | 0.868751 | 5.171494e-66 | -8.615850e-47 |
Msa0393140 | Msa0685890 | 0.806024 | 1.005370e-49 | -8.615850e-47 |
Msa0401340 | Msa0685890 | 0.838001 | 3.726308e-57 | -8.615850e-47 |
Msa0404060 | Msa0685890 | 0.878042 | 3.865220e-69 | -8.615850e-47 |
Msa0404070 | Msa0685890 | 0.844423 | 7.630893e-59 | -8.615850e-47 |
Msa0404690 | Msa0685890 | 0.846501 | 2.087690e-59 | -8.615850e-47 |
Msa0415200 | Msa0685890 | 0.802821 | 4.677923e-49 | -8.615850e-47 |
Msa0416540 | Msa0685890 | 0.850873 | 1.280824e-60 | -8.615850e-47 |
Msa0418430 | Msa0685890 | 0.802496 | 5.457353e-49 | -8.615850e-47 |
Msa0419040 | Msa0685890 | 0.817437 | 3.300147e-52 | -8.615850e-47 |
Msa0420800 | Msa0685890 | 0.813188 | 2.904991e-51 | -8.615850e-47 |
Msa0421720 | Msa0685890 | 0.842954 | 1.885496e-58 | -8.615850e-47 |
Msa0425320 | Msa0685890 | 0.848130 | 7.454804e-60 | -8.615850e-47 |
Msa0430290 | Msa0685890 | 0.866487 | 2.751586e-65 | -8.615850e-47 |
Msa0432720 | Msa0685890 | 0.842727 | 2.166521e-58 | -8.615850e-47 |
Msa0437550 | Msa0685890 | 0.815719 | 8.005719e-52 | -8.615850e-47 |
Msa0437790 | Msa0685890 | 0.810231 | 1.277269e-50 | -8.615850e-47 |
Msa0440310 | Msa0685890 | 0.871959 | 4.589691e-67 | -8.615850e-47 |
Msa0448120 | Msa0685890 | 0.831104 | 2.016474e-55 | -8.615850e-47 |
Msa0467080 | Msa0685890 | 0.800757 | 1.240978e-48 | -8.615850e-47 |
Msa0468020 | Msa0685890 | 0.821936 | 3.096407e-53 | -8.615850e-47 |
Msa0469950 | Msa0685890 | 0.894257 | 2.924414e-75 | -8.615850e-47 |
Msa0471760 | Msa0685890 | 0.849686 | 2.756766e-60 | -8.615850e-47 |
Msa0480430 | Msa0685890 | 0.800419 | 1.453861e-48 | -8.615850e-47 |
Msa0481490 | Msa0685890 | 0.867082 | 1.778714e-65 | -8.615850e-47 |
Msa0238860 | Msa0685890 | 0.843655 | 1.225813e-58 | -8.615850e-47 |
Msa0240640 | Msa0685890 | 0.827484 | 1.525537e-54 | -8.615850e-47 |
Msa0242290 | Msa0685890 | 0.838777 | 2.350651e-57 | -8.615850e-47 |
Msa0253160 | Msa0685890 | 0.873114 | 1.889281e-67 | -8.615850e-47 |
Msa0258700 | Msa0685890 | -0.803860 | 2.849379e-49 | -8.615850e-47 |
Msa0265580 | Msa0685890 | 0.831681 | 1.453947e-55 | -8.615850e-47 |
Msa0267340 | Msa0685890 | 0.815164 | 1.063446e-51 | -8.615850e-47 |
Msa0272570 | Msa0685890 | 0.803604 | 3.220536e-49 | -8.615850e-47 |
Msa0276590 | Msa0685890 | 0.850823 | 1.323464e-60 | -8.615850e-47 |
Msa0280500 | Msa0685890 | 0.827145 | 1.838712e-54 | -8.615850e-47 |
Msa0291940 | Msa0685890 | 0.864498 | 1.164292e-64 | -8.615850e-47 |
Msa0295570 | Msa0685890 | 0.809394 | 1.933900e-50 | -8.615850e-47 |
Msa0297950 | Msa0685890 | -0.803807 | 2.922655e-49 | -8.615850e-47 |
Msa0303440 | Msa0685890 | 0.844233 | 8.580737e-59 | -8.615850e-47 |
Msa0303500 | Msa0685890 | 0.837615 | 4.682635e-57 | -8.615850e-47 |
Msa0304110 | Msa0685890 | 0.804351 | 2.252778e-49 | -8.615850e-47 |
Msa0306160 | Msa0685890 | 0.832837 | 7.527082e-56 | -8.615850e-47 |
Msa0308570 | Msa0685890 | 0.827887 | 1.220699e-54 | -8.615850e-47 |
Msa0309670 | Msa0685890 | 0.810095 | 1.366795e-50 | -8.615850e-47 |
Msa0311570 | Msa0685890 | 0.817666 | 2.929852e-52 | -8.615850e-47 |
Msa0316610 | Msa0685890 | 0.833791 | 4.353672e-56 | -8.615850e-47 |
Msa0319710 | Msa0685890 | 0.815019 | 1.145259e-51 | -8.615850e-47 |
Msa0319720 | Msa0685890 | 0.811496 | 6.800652e-51 | -8.615850e-47 |
Msa0329910 | Msa0685890 | 0.815729 | 7.961757e-52 | -8.615850e-47 |
Msa0333900 | Msa0685890 | 0.818043 | 2.408109e-52 | -8.615850e-47 |
Msa0334020 | Msa0685890 | 0.811995 | 5.297454e-51 | -8.615850e-47 |
Msa0335890 | Msa0685890 | -0.827072 | 1.914898e-54 | -8.615850e-47 |
Msa0339200 | Msa0685890 | -0.827698 | 1.354682e-54 | -8.615850e-47 |
Msa0344680 | Msa0685890 | 0.888913 | 3.871814e-73 | -8.615850e-47 |
Msa0346790 | Msa0685890 | 0.857946 | 1.153686e-62 | -8.615850e-47 |
Msa0354390 | Msa0685890 | 0.829366 | 5.358140e-55 | -8.615850e-47 |
Msa0358290 | Msa0685890 | 0.822128 | 2.795392e-53 | -8.615850e-47 |
Msa0485210 | Msa0685890 | 0.813887 | 2.038483e-51 | -8.615850e-47 |
Msa0487490 | Msa0685890 | 0.827767 | 1.304405e-54 | -8.615850e-47 |
Msa0508780 | Msa0685890 | 0.803606 | 3.217272e-49 | -8.615850e-47 |
Msa0515460 | Msa0685890 | 0.845113 | 4.972136e-59 | -8.615850e-47 |
Msa0524960 | Msa0685890 | 0.825925 | 3.592884e-54 | -8.615850e-47 |
Msa0525270 | Msa0685890 | 0.861520 | 9.683986e-64 | -8.615850e-47 |
Msa0525280 | Msa0685890 | 0.869282 | 3.478993e-66 | -8.615850e-47 |
Msa0528740 | Msa0685890 | 0.805714 | 1.168013e-49 | -8.615850e-47 |
Msa0530340 | Msa0685890 | 0.873570 | 1.327100e-67 | -8.615850e-47 |
Msa0533270 | Msa0685890 | 0.808961 | 2.394753e-50 | -8.615850e-47 |
Msa0544600 | Msa0685890 | 0.805435 | 1.336782e-49 | -8.615850e-47 |
Msa0545230 | Msa0685890 | 0.845772 | 3.296898e-59 | -8.615850e-47 |
Msa0546080 | Msa0685890 | 0.838257 | 3.200965e-57 | -8.615850e-47 |
Msa0548210 | Msa0685890 | 0.856059 | 4.156098e-62 | -8.615850e-47 |
Msa0549110 | Msa0685890 | 0.809325 | 2.001278e-50 | -8.615850e-47 |
Msa0549540 | Msa0685890 | 0.863896 | 1.794479e-64 | -8.615850e-47 |
Msa0549760 | Msa0685890 | 0.829861 | 4.061638e-55 | -8.615850e-47 |
Msa0556070 | Msa0685890 | 0.860659 | 1.770060e-63 | -8.615850e-47 |
Msa0561420 | Msa0685890 | 0.830342 | 3.100507e-55 | -8.615850e-47 |
Msa0569230 | Msa0685890 | 0.825687 | 4.092317e-54 | -8.615850e-47 |
Msa0569930 | Msa0685890 | 0.831259 | 1.847100e-55 | -8.615850e-47 |
Msa0570680 | Msa0685890 | 0.832097 | 1.148116e-55 | -8.615850e-47 |
Msa0577050 | Msa0685890 | 0.832562 | 8.809265e-56 | -8.615850e-47 |
Msa0583740 | Msa0685890 | 0.811539 | 6.654895e-51 | -8.615850e-47 |
Msa0584280 | Msa0685890 | 0.817566 | 3.086128e-52 | -8.615850e-47 |
Msa0587250 | Msa0685890 | 0.822780 | 1.972157e-53 | -8.615850e-47 |
Msa0587900 | Msa0685890 | 0.827442 | 1.560600e-54 | -8.615850e-47 |
Msa0600820 | Msa0685890 | 0.829194 | 5.899345e-55 | -8.615850e-47 |
PPI
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0685890 | MtrunA17_Chr4g0034481 | 96.539 | 549 | 16 | 2 | 1 | 548 | 1 | 547 | 0.0 | 1086 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0685890 | AT1G49380.1 | 66.850 | 546 | 167 | 5 | 11 | 545 | 5 | 547 | 0.0 | 751 |
Find 144 sgRNAs with CRISPR-Local
Find 252 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
CCACACCATAAGGACCTTTC+TGG | 0.163357 | 4_4:+50172822 | None:intergenic |
CTTGCAATGTTGGCCCTTCT+TGG | 0.176283 | 4_4:-50171845 | Msa0685890:CDS |
TGAATAGTATCTTTGCTATT+TGG | 0.198189 | 4_4:-50169125 | Msa0685890:CDS |
TTCTGGTTCTTTGAGCTTAC+TGG | 0.214243 | 4_4:+50172839 | None:intergenic |
GATGATGATTCAACTATTTC+AGG | 0.215636 | 4_4:+50169466 | None:intergenic |
TCTAATTTGCCTTTGGCTAT+TGG | 0.216573 | 4_4:-50172764 | Msa0685890:CDS |
AGTGCTGCAGGGAGCTTTAA+AGG | 0.217791 | 4_4:-50171302 | Msa0685890:CDS |
CAGAGCAAAGTTAGAGTTTC+CGG | 0.234060 | 4_4:-50169518 | Msa0685890:CDS |
AATGGAGATAAGAAACTTTA+TGG | 0.238655 | 4_4:-50170775 | Msa0685890:CDS |
GTTAACTCTCCTGATGTTAA+AGG | 0.262581 | 4_4:-50170730 | Msa0685890:CDS |
TTATCTCCATTGATCTTTAG+AGG | 0.290427 | 4_4:+50170787 | None:intergenic |
CCTAACACAGGATGATCTTC+AGG | 0.304432 | 4_4:+50171932 | None:intergenic |
GTGATACCATCATATCTTAA+AGG | 0.306162 | 4_4:+50170889 | None:intergenic |
ATTTCCCTTCCTTATCATAA+AGG | 0.309945 | 4_4:+50170106 | None:intergenic |
ACTCCAATCCGTCTGGTATA+TGG | 0.313882 | 4_4:+50170867 | None:intergenic |
CACTCATCAAGGTTTCAAAA+AGG | 0.314179 | 4_4:-50171784 | Msa0685890:intron |
TTGAGAAGACATTGATTCAT+AGG | 0.322099 | 4_4:+50173055 | None:intergenic |
GATTCTCTCTAATTTGCCTT+TGG | 0.333030 | 4_4:-50172771 | Msa0685890:CDS |
TCATGTCAACAGATTCTCTA+TGG | 0.335451 | 4_4:-50171180 | Msa0685890:CDS |
CAGTTTCAGTTTCCAGTTTG+AGG | 0.335650 | 4_4:+50173121 | None:intergenic |
GATGGAACAACAGTCGTTAT+TGG | 0.338022 | 4_4:-50169553 | Msa0685890:CDS |
GATGATCTTCAGGGTAGTTC+TGG | 0.339110 | 4_4:+50171942 | None:intergenic |
CCAACATTGCAAGAAATATA+GGG | 0.340845 | 4_4:+50171855 | None:intergenic |
GATAAGGAAGGGAAATTTGC+AGG | 0.341411 | 4_4:-50170099 | Msa0685890:CDS |
TTGTGTAAGTGCAGGCTATA+AGG | 0.342045 | 4_4:+50171816 | None:intergenic |
CAACTGCAAACTGTACATTA+TGG | 0.346035 | 4_4:+50169097 | None:intergenic |
TATAGCACTGCTGTTGATAA+TGG | 0.346092 | 4_4:-50171339 | Msa0685890:CDS |
CCCTATATTTCTTGCAATGT+TGG | 0.348656 | 4_4:-50171855 | Msa0685890:CDS |
TTGATTGGGAGCTTTGAATT+AGG | 0.356379 | 4_4:+50170066 | None:intergenic |
GCCAACATTGCAAGAAATAT+AGG | 0.366507 | 4_4:+50171854 | None:intergenic |
GACATAAGAACTTTGGTATC+TGG | 0.370057 | 4_4:+50169178 | None:intergenic |
CCTGAAGATCATCCTGTGTT+AGG | 0.379251 | 4_4:-50171932 | Msa0685890:CDS |
GTCAATTGTCCTTTATGATA+AGG | 0.380317 | 4_4:-50170115 | Msa0685890:CDS |
AGGTTCAGTCACTGTGCCTC+AGG | 0.385654 | 4_4:-50171282 | Msa0685890:CDS |
TCTGAGCCGTCAATGTTGAT+TGG | 0.394000 | 4_4:+50170051 | None:intergenic |
CTGAGCCGTCAATGTTGATT+GGG | 0.396472 | 4_4:+50170052 | None:intergenic |
AGATGTTGGTACTATACTAA+TGG | 0.401571 | 4_4:-50171602 | Msa0685890:CDS |
AGTTTCAGTTTCCAGTTTGA+GGG | 0.403729 | 4_4:+50173122 | None:intergenic |
GGTCAAGAAGTTGAGTAAAA+AGG | 0.404743 | 4_4:-50172801 | Msa0685890:CDS |
CAGTAGTGGCTTGGACTTGA+AGG | 0.414087 | 4_4:-50170004 | Msa0685890:intron |
GCTGACACAGTCCCTCAAAC+TGG | 0.415405 | 4_4:-50173133 | None:intergenic |
AAAACTCAGGTTTCTCGCCT+TGG | 0.423189 | 4_4:+50171969 | None:intergenic |
GGTGCCATAGCCAAGTTATA+AGG | 0.424092 | 4_4:+50170808 | None:intergenic |
AAGAACCAGAAAGGTCCTTA+TGG | 0.425770 | 4_4:-50172827 | Msa0685890:CDS |
AGTGCTATATGAACGCCAAC+AGG | 0.426144 | 4_4:+50171353 | None:intergenic |
GACTGTTGTTCCATCTTGTA+AGG | 0.430467 | 4_4:+50169561 | None:intergenic |
TTAGTATAGTACCAACATCT+TGG | 0.436893 | 4_4:+50171605 | None:intergenic |
TGATACCATCATATCTTAAA+GGG | 0.444057 | 4_4:+50170890 | None:intergenic |
GATGTTGGTACTATACTAAT+GGG | 0.446081 | 4_4:-50171601 | Msa0685890:CDS |
CCAGTTGTATATGCTGGATT+TGG | 0.446587 | 4_4:-50169871 | Msa0685890:CDS |
ATTGTCGTTGTGGATGCAAT+AGG | 0.449874 | 4_4:-50170027 | Msa0685890:CDS |
AGCAAGAGGTTCATCTCGTC+CGG | 0.469158 | 4_4:+50169499 | None:intergenic |
TGCAATAGGCAGTAGTGGCT+TGG | 0.469467 | 4_4:-50170013 | Msa0685890:CDS |
GGAGGAACTTTAAGTGCTGC+AGG | 0.471844 | 4_4:-50171314 | Msa0685890:CDS |
GCCAACAGGGGCTAGCCGAC+CGG | 0.474375 | 4_4:+50171367 | None:intergenic |
ACTTACATTCCTTTAACATC+AGG | 0.476122 | 4_4:+50170721 | None:intergenic |
AACTTCTTGACCACACCATA+AGG | 0.476566 | 4_4:+50172812 | None:intergenic |
TCTATGGATTATTATGAAAG+TGG | 0.477182 | 4_4:-50171164 | Msa0685890:CDS |
CGATCTTTCCCTCTTGAACA+TGG | 0.481054 | 4_4:-50170953 | Msa0685890:CDS |
CTTTCCCTCTTGAACATGGA+TGG | 0.481191 | 4_4:-50170949 | Msa0685890:CDS |
TTTGAACAAGGGATGAAAAG+TGG | 0.482240 | 4_4:+50173027 | None:intergenic |
ATGATGATTCAACTATTTCA+GGG | 0.487321 | 4_4:+50169467 | None:intergenic |
TTCTCCTGTGTGAGTGGTGG+AGG | 0.491970 | 4_4:+50172887 | None:intergenic |
ACATCTTGGATTGATGCTCT+TGG | 0.492453 | 4_4:+50171619 | None:intergenic |
CCAAATCCAGCATATACAAC+TGG | 0.494043 | 4_4:+50169871 | None:intergenic |
CTGAAATACTCCAATCCGTC+TGG | 0.496597 | 4_4:+50170860 | None:intergenic |
TATGTTATGCAGACTGATCC+TGG | 0.497099 | 4_4:-50169898 | Msa0685890:intron |
GCATATACAACTGGCACGCC+AGG | 0.499803 | 4_4:+50169880 | None:intergenic |
CAGCTATTTATCTCATTCAC+AGG | 0.500481 | 4_4:-50169824 | Msa0685890:intron |
GATACAAGACATAAGAACTT+TGG | 0.502117 | 4_4:+50169171 | None:intergenic |
TCTGTATTAAAAGCATCAGT+TGG | 0.502693 | 4_4:+50171206 | None:intergenic |
CAATGAAGGACCTTATAACT+TGG | 0.502844 | 4_4:-50170818 | Msa0685890:CDS |
TACTATTCATCTCCCAAATG+AGG | 0.503229 | 4_4:+50169139 | None:intergenic |
TTTGTTGTAGGAGACGTTCT+CGG | 0.507703 | 4_4:-50171251 | Msa0685890:CDS |
ACTAATGGGAGCTGGATATG+AGG | 0.511613 | 4_4:-50171587 | Msa0685890:intron |
ATAGCACTGCTGTTGATAAT+GGG | 0.512040 | 4_4:-50171338 | Msa0685890:CDS |
AAGCTCCCAATCAACATTGA+CGG | 0.512647 | 4_4:-50170057 | Msa0685890:CDS |
GGATTATAGGTATTCTTGAA+AGG | 0.517238 | 4_4:-50171419 | Msa0685890:intron |
CTATGGATTATTATGAAAGT+GGG | 0.518677 | 4_4:-50171163 | Msa0685890:CDS |
GCCGGTCGGCTAGCCCCTGT+TGG | 0.520609 | 4_4:-50171368 | Msa0685890:CDS |
GGCGTGCCAGTTGTATATGC+TGG | 0.520966 | 4_4:-50169877 | Msa0685890:CDS |
ATTGTCCTTTATGATAAGGA+AGG | 0.526577 | 4_4:-50170111 | Msa0685890:CDS |
CAAATTCTCAAGGACAATGA+AGG | 0.527947 | 4_4:-50170832 | Msa0685890:CDS |
ATGGCACCTCTAAAGATCAA+TGG | 0.528038 | 4_4:-50170793 | Msa0685890:CDS |
TCACCATATACCAGACGGAT+TGG | 0.537124 | 4_4:-50170870 | Msa0685890:CDS |
TTCAGCTCTGCAAATTCTCA+AGG | 0.537400 | 4_4:-50170842 | Msa0685890:CDS |
TGTGTCACATGATGTCTTTG+AGG | 0.540282 | 4_4:-50173081 | Msa0685890:CDS |
AACGACCCTTTAAGATATGA+TGG | 0.540927 | 4_4:-50170895 | Msa0685890:CDS |
AACACAACTCCCACTCATCA+AGG | 0.543840 | 4_4:-50171795 | Msa0685890:CDS |
GGTTCAGTCACTGTGCCTCA+GGG | 0.545272 | 4_4:-50171281 | Msa0685890:CDS |
AAGATATGGGCCTTACAAGA+TGG | 0.553885 | 4_4:-50169571 | Msa0685890:CDS |
TTGAACAAGGGATGAAAAGT+GGG | 0.557949 | 4_4:+50173028 | None:intergenic |
ATTAAAAGCATCAGTTGGAA+AGG | 0.559039 | 4_4:+50171211 | None:intergenic |
ATCTAAGCAAACTGATAGCA+TGG | 0.559854 | 4_4:-50169440 | Msa0685890:intron |
TATAAGGGATGCACCAAGAA+GGG | 0.561371 | 4_4:+50171832 | None:intergenic |
CTAACACAGGATGATCTTCA+GGG | 0.561639 | 4_4:+50171933 | None:intergenic |
CTATAAGGGATGCACCAAGA+AGG | 0.562534 | 4_4:+50171831 | None:intergenic |
TGTGTAAGTGCAGGCTATAA+GGG | 0.563934 | 4_4:+50171817 | None:intergenic |
GGAGAGTTAACATCTCCAAC+CGG | 0.566287 | 4_4:+50170742 | None:intergenic |
GGTACTATACTAATGGGAGC+TGG | 0.567256 | 4_4:-50171595 | Msa0685890:CDS |
CCACGAAAAGCATACAAAGT+TGG | 0.570654 | 4_4:+50171395 | None:intergenic |
CATAAAGGACAATTGACTGC+AGG | 0.571577 | 4_4:+50170121 | None:intergenic |
CATGTTCAAGAGGGAAAGAT+CGG | 0.573438 | 4_4:+50170954 | None:intergenic |
TTGTCCTTTATGATAAGGAA+GGG | 0.575204 | 4_4:-50170110 | Msa0685890:CDS |
GGAGACGTTCTCGGTCCTAC+CGG | 0.575828 | 4_4:-50171242 | Msa0685890:CDS |
ACTATTCATCTCCCAAATGA+GGG | 0.576985 | 4_4:+50169140 | None:intergenic |
AGTTCTGTTGAATTTGAACA+AGG | 0.583852 | 4_4:+50173015 | None:intergenic |
TGGATGGAAAAGAAGTAATG+AGG | 0.584497 | 4_4:-50170933 | Msa0685890:CDS |
GGAACAACAGTCGTTATTGG+AGG | 0.585525 | 4_4:-50169550 | Msa0685890:CDS |
TCATCATTCTCCTGTGTGAG+TGG | 0.588845 | 4_4:+50172881 | None:intergenic |
TCATTCTCCTGTGTGAGTGG+TGG | 0.589165 | 4_4:+50172884 | None:intergenic |
GTCATTTATCCACTCTGCCG+AGG | 0.592482 | 4_4:-50171674 | Msa0685890:CDS |
TTCTCCTCCACCACTCACAC+AGG | 0.595333 | 4_4:-50172891 | Msa0685890:CDS |
TGCAGTTGATGGTGAATGAG+AGG | 0.596112 | 4_4:+50172975 | None:intergenic |
AGAGCATCAATCCAAGATGT+TGG | 0.597012 | 4_4:-50171616 | Msa0685890:CDS |
CTCTTGCTTACGTATAACCT+CGG | 0.597641 | 4_4:+50171657 | None:intergenic |
GTGGATGCAATAGGCAGTAG+TGG | 0.602202 | 4_4:-50170018 | Msa0685890:CDS |
GTAAGCTCAAAGAACCAGAA+AGG | 0.611466 | 4_4:-50172836 | Msa0685890:CDS |
GAGTTGTGTTGTGTAAGTGC+AGG | 0.612701 | 4_4:+50171808 | None:intergenic |
CGGCTCAGAAATTGTCGTTG+TGG | 0.613524 | 4_4:-50170037 | Msa0685890:CDS |
AGTTGGAAAGGAAAGAAAGC+CGG | 0.613737 | 4_4:+50171223 | None:intergenic |
CAACATTGCAAGAAATATAG+GGG | 0.614719 | 4_4:+50171856 | None:intergenic |
AGGACCTTATAACTTGGCTA+TGG | 0.614764 | 4_4:-50170812 | Msa0685890:CDS |
AACATTTCTCCAATAGCCAA+AGG | 0.619561 | 4_4:+50172755 | None:intergenic |
GTGCTATATGAACGCCAACA+GGG | 0.620699 | 4_4:+50171354 | None:intergenic |
GCAGTTGATGGTGAATGAGA+GGG | 0.632096 | 4_4:+50172976 | None:intergenic |
TAGTTCTGGAAATAAAACTC+AGG | 0.635294 | 4_4:+50171956 | None:intergenic |
GTTCAGTCACTGTGCCTCAG+GGG | 0.641281 | 4_4:-50171280 | Msa0685890:CDS |
GAACAACAGTCGTTATTGGA+GGG | 0.642119 | 4_4:-50169549 | Msa0685890:CDS |
CCAGAAAGGTCCTTATGGTG+TGG | 0.650861 | 4_4:-50172822 | Msa0685890:CDS |
TGCTATATGAACGCCAACAG+GGG | 0.655968 | 4_4:+50171355 | None:intergenic |
TACGTATAACCTCGGCAGAG+TGG | 0.660612 | 4_4:+50171665 | None:intergenic |
GAGAATGATGATATCAACAG+TGG | 0.661987 | 4_4:-50172869 | Msa0685890:CDS |
CTGCTGTTGATAATGGGTGG+AGG | 0.663763 | 4_4:-50171332 | Msa0685890:CDS |
TATGGATTATTATGAAAGTG+GGG | 0.664635 | 4_4:-50171162 | Msa0685890:CDS |
CTATTCATCTCCCAAATGAG+GGG | 0.664791 | 4_4:+50169141 | None:intergenic |
AATACATGTGATCGAAACCA+AGG | 0.665045 | 4_4:+50171882 | None:intergenic |
GAGGAACTTTAAGTGCTGCA+GGG | 0.669763 | 4_4:-50171313 | Msa0685890:CDS |
TGGTATCACCATATACCAGA+CGG | 0.679132 | 4_4:-50170875 | Msa0685890:CDS |
GTTCTGTTGAATTTGAACAA+GGG | 0.681172 | 4_4:+50173016 | None:intergenic |
GCACTGCTGTTGATAATGGG+TGG | 0.691436 | 4_4:-50171335 | Msa0685890:CDS |
GGATTATTATGAAAGTGGGG+AGG | 0.692179 | 4_4:-50171159 | Msa0685890:intron |
ACAACAAAATTCAGCCCCTG+AGG | 0.701712 | 4_4:+50171266 | None:intergenic |
GGAAAGGAAAGAAAGCCGGT+AGG | 0.713048 | 4_4:+50171227 | None:intergenic |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!!! | ATTTATTTTATCTTTTGATA+TGG | - | chr4_4:50169712-50169731 | Msa0685890:intron | 10.0% |
!! | ATTAAGATATTTATAAAAAC+AGG | - | chr4_4:50169753-50169772 | Msa0685890:intron | 10.0% |
!! | AAAATATTTGTTTCAATATT+TGG | - | chr4_4:50171538-50171557 | Msa0685890:intron | 10.0% |
!!! | AAAATTTTGAGAACTAAAAA+GGG | + | chr4_4:50169576-50169595 | None:intergenic | 15.0% |
!!! | TCTAATTAACAAAAGTATTA+TGG | + | chr4_4:50169779-50169798 | None:intergenic | 15.0% |
!!! | AAAATGTAATTTTGGATTAT+AGG | - | chr4_4:50170783-50170802 | Msa0685890:CDS | 15.0% |
!!! | GTTTTTGTTTTATATGAAAT+TGG | - | chr4_4:50171088-50171107 | Msa0685890:intron | 15.0% |
!!! | AATGAATTTTAGTTTGTATT+TGG | - | chr4_4:50171595-50171614 | Msa0685890:CDS | 15.0% |
!!! | CAAAAATCTTTTTCTTTTAT+TGG | + | chr4_4:50171911-50171930 | None:intergenic | 15.0% |
!!! | TAAAATGTGAATTTACTTTT+TGG | - | chr4_4:50172613-50172632 | Msa0685890:intron | 15.0% |
!!! | CAAAATTTTGAGAACTAAAA+AGG | + | chr4_4:50169577-50169596 | None:intergenic | 20.0% |
!! | GTAAACATATACTTATCATA+TGG | + | chr4_4:50169920-50169939 | None:intergenic | 20.0% |
!! | AAAAATGACTAAGATATGTT+TGG | + | chr4_4:50170140-50170159 | None:intergenic | 20.0% |
!! | GTACTAAAGAAAAATTTCTA+TGG | - | chr4_4:50170207-50170226 | Msa0685890:intron | 20.0% |
!! | AAAATATTCAAGTCTATTGT+TGG | + | chr4_4:50170750-50170769 | None:intergenic | 20.0% |
!!! | TGCTATTTTGTTGTAAAATT+TGG | - | chr4_4:50171203-50171222 | Msa0685890:CDS | 20.0% |
!! | ATACAAACTAAAATTCATTG+AGG | + | chr4_4:50171594-50171613 | None:intergenic | 20.0% |
!! | TAGATAATTGTAATAGTTTG+AGG | - | chr4_4:50171883-50171902 | Msa0685890:CDS | 20.0% |
!! | AAATTACAAATTAAGTGCAA+AGG | - | chr4_4:50171955-50171974 | Msa0685890:CDS | 20.0% |
!! | TCTATAAATGAAAGCAAAAT+TGG | + | chr4_4:50172490-50172509 | None:intergenic | 20.0% |
!!! | TTTTGGTAAATTGAAAGATA+TGG | - | chr4_4:50172630-50172649 | Msa0685890:intron | 20.0% |
!! | TTTGGTAAATTGAAAGATAT+GGG | - | chr4_4:50172631-50172650 | Msa0685890:intron | 20.0% |
!!! | TTCACCATTGCTTTTTTAAT+GGG | - | chr4_4:50169481-50169500 | Msa0685890:CDS | 25.0% |
!!! | ATTGCTTTTTTAATGGGTTT+GGG | - | chr4_4:50169487-50169506 | Msa0685890:CDS | 25.0% |
!! | TAGTTCTCAAAATTTTGCTT+AGG | - | chr4_4:50169580-50169599 | Msa0685890:intron | 25.0% |
! | GGGTGAACTTTAAATTATTA+TGG | - | chr4_4:50169841-50169860 | Msa0685890:CDS | 25.0% |
! | TAAAGAAAAATTTCTATGGC+AGG | - | chr4_4:50170211-50170230 | Msa0685890:intron | 25.0% |
! | AAATAGTTAAGTGTGAATCA+TGG | + | chr4_4:50170667-50170686 | None:intergenic | 25.0% |
!! | TCTATGGATTATTATGAAAG+TGG | - | chr4_4:50171051-50171070 | Msa0685890:intron | 25.0% |
!! | CTATGGATTATTATGAAAGT+GGG | - | chr4_4:50171052-50171071 | Msa0685890:intron | 25.0% |
!! | TATGGATTATTATGAAAGTG+GGG | - | chr4_4:50171053-50171072 | Msa0685890:intron | 25.0% |
!! | AAATACACTTTGACTTATTC+TGG | + | chr4_4:50171151-50171170 | None:intergenic | 25.0% |
! | TGATACCATCATATCTTAAA+GGG | + | chr4_4:50171328-50171347 | None:intergenic | 25.0% |
! | AATGGAGATAAGAAACTTTA+TGG | - | chr4_4:50171440-50171459 | Msa0685890:intron | 25.0% |
! | ATCAGATAATTGAAGTAGTT+AGG | - | chr4_4:50171844-50171863 | Msa0685890:CDS | 25.0% |
! | TAACATAAGCATTAAGCAAT+AGG | + | chr4_4:50172304-50172323 | None:intergenic | 25.0% |
!!! | AGTGTTATTTGCTCATTTTT+AGG | + | chr4_4:50172550-50172569 | None:intergenic | 25.0% |
! | TAAAAATGAGCAAATAACAC+TGG | - | chr4_4:50172549-50172568 | Msa0685890:intron | 25.0% |
! | ATGATGATTCAACTATTTCA+GGG | + | chr4_4:50172751-50172770 | None:intergenic | 25.0% |
! | GAATTAAAAGACTCTTCAAT+TGG | - | chr4_4:50172835-50172854 | Msa0685890:CDS | 25.0% |
! | TGACATACAAACATACAAAT+TGG | - | chr4_4:50172899-50172918 | Msa0685890:CDS | 25.0% |
!!! | TGAATAGTATCTTTGCTATT+TGG | - | chr4_4:50173090-50173109 | Msa0685890:exon | 25.0% |
!! | TTGAGAAGACATTGATTCAT+AGG | + | chr4_4:50169163-50169182 | None:intergenic | 30.0% |
GTTCTGTTGAATTTGAACAA+GGG | + | chr4_4:50169202-50169221 | None:intergenic | 30.0% | |
AGTTCTGTTGAATTTGAACA+AGG | + | chr4_4:50169203-50169222 | None:intergenic | 30.0% | |
!!! | TATTCTTTCCCTTGTTTTTG+AGG | + | chr4_4:50169267-50169286 | None:intergenic | 30.0% |
!!! | GTTCACCATTGCTTTTTTAA+TGG | - | chr4_4:50169480-50169499 | Msa0685890:CDS | 30.0% |
CAAACCCATTAAAAAAGCAA+TGG | + | chr4_4:50169488-50169507 | None:intergenic | 30.0% | |
!!! | CATTGCTTTTTTAATGGGTT+TGG | - | chr4_4:50169486-50169505 | Msa0685890:CDS | 30.0% |
AATCAAAGTCAAATTTGCCA+CGG | + | chr4_4:50169948-50169967 | None:intergenic | 30.0% | |
AATGACTAAGATATGTTTGG+TGG | + | chr4_4:50170137-50170156 | None:intergenic | 30.0% | |
!! | GAGAGCTAAAATTGATTTTG+AGG | + | chr4_4:50170167-50170186 | None:intergenic | 30.0% |
!! | TAGTTCTGGAAATAAAACTC+AGG | + | chr4_4:50170262-50170281 | None:intergenic | 30.0% |
CAAGTAAAAAATCCTAACAC+AGG | + | chr4_4:50170298-50170317 | None:intergenic | 30.0% | |
!!! | CTGTGTTAGGATTTTTTACT+TGG | - | chr4_4:50170296-50170315 | Msa0685890:intron | 30.0% |
!!! | TAGGATTTTTTACTTGGAGA+TGG | - | chr4_4:50170302-50170321 | Msa0685890:intron | 30.0% |
CAACATTGCAAGAAATATAG+GGG | + | chr4_4:50170362-50170381 | None:intergenic | 30.0% | |
CCAACATTGCAAGAAATATA+GGG | + | chr4_4:50170363-50170382 | None:intergenic | 30.0% | |
!!! | TTTTTGAAACCTTGATGAGT+GGG | + | chr4_4:50170432-50170451 | None:intergenic | 30.0% |
ATCAAGGTTTCAAAAAGGTT+TGG | - | chr4_4:50170436-50170455 | Msa0685890:intron | 30.0% | |
! | TTTTCTGTGTTCATAATGCT+TGG | - | chr4_4:50170471-50170490 | Msa0685890:intron | 30.0% |
TTAGTATAGTACCAACATCT+TGG | + | chr4_4:50170613-50170632 | None:intergenic | 30.0% | |
AGATGTTGGTACTATACTAA+TGG | - | chr4_4:50170613-50170632 | Msa0685890:intron | 30.0% | |
GATGTTGGTACTATACTAAT+GGG | - | chr4_4:50170614-50170633 | Msa0685890:intron | 30.0% | |
! | GCGCTAACAAAATGTAATTT+TGG | - | chr4_4:50170775-50170794 | Msa0685890:CDS | 30.0% |
GGATTATAGGTATTCTTGAA+AGG | - | chr4_4:50170796-50170815 | Msa0685890:CDS | 30.0% | |
!! | ATTAAAAGCATCAGTTGGAA+AGG | + | chr4_4:50171007-50171026 | None:intergenic | 30.0% |
!! | TCTGTATTAAAAGCATCAGT+TGG | + | chr4_4:50171012-50171031 | None:intergenic | 30.0% |
! | TGGTTTTCGATTTTTGTTAC+AGG | - | chr4_4:50171223-50171242 | Msa0685890:CDS | 30.0% |
GTGATACCATCATATCTTAA+AGG | + | chr4_4:50171329-50171348 | None:intergenic | 30.0% | |
TTATCTCCATTGATCTTTAG+AGG | + | chr4_4:50171431-50171450 | None:intergenic | 30.0% | |
! | ACTTTATGGTACTTTTCTAC+CGG | - | chr4_4:50171454-50171473 | Msa0685890:intron | 30.0% |
ACTTACATTCCTTTAACATC+AGG | + | chr4_4:50171497-50171516 | None:intergenic | 30.0% | |
GTTTCAATATTTGGAAGCTT+TGG | - | chr4_4:50171547-50171566 | Msa0685890:intron | 30.0% | |
GTCAATTGTCCTTTATGATA+AGG | - | chr4_4:50172100-50172119 | Msa0685890:intron | 30.0% | |
ATTGTCCTTTATGATAAGGA+AGG | - | chr4_4:50172104-50172123 | Msa0685890:intron | 30.0% | |
TTGTCCTTTATGATAAGGAA+GGG | - | chr4_4:50172105-50172124 | Msa0685890:intron | 30.0% | |
ATTTCCCTTCCTTATCATAA+AGG | + | chr4_4:50172112-50172131 | None:intergenic | 30.0% | |
TAAAGGAAAATAACCAGACT+TGG | + | chr4_4:50172249-50172268 | None:intergenic | 30.0% | |
ACACAACTAATTGCATCTAA+AGG | + | chr4_4:50172266-50172285 | None:intergenic | 30.0% | |
TTATGCATATGACATTTGTC+TGG | + | chr4_4:50172517-50172536 | None:intergenic | 30.0% | |
GATGATGATTCAACTATTTC+AGG | + | chr4_4:50172752-50172771 | None:intergenic | 30.0% | |
TAAAAGACTCTTCAATTGGA+TGG | - | chr4_4:50172839-50172858 | Msa0685890:CDS | 30.0% | |
ATTGGATGGTAGCATATATA+TGG | - | chr4_4:50172853-50172872 | Msa0685890:CDS | 30.0% | |
! | AAGATGATCTGCAAAAGTTT+TGG | + | chr4_4:50172946-50172965 | None:intergenic | 30.0% |
GATACAAGACATAAGAACTT+TGG | + | chr4_4:50173047-50173066 | None:intergenic | 30.0% | |
AGTTTCAGTTTCCAGTTTGA+GGG | + | chr4_4:50169096-50169115 | None:intergenic | 35.0% | |
TTGAACAAGGGATGAAAAGT+GGG | + | chr4_4:50169190-50169209 | None:intergenic | 35.0% | |
TTTGAACAAGGGATGAAAAG+TGG | + | chr4_4:50169191-50169210 | None:intergenic | 35.0% | |
AACTGCAACCTCAAAAACAA+GGG | - | chr4_4:50169256-50169275 | Msa0685890:intron | 35.0% | |
GAGAATGATGATATCAACAG+TGG | - | chr4_4:50169346-50169365 | Msa0685890:intron | 35.0% | |
GGTCAAGAAGTTGAGTAAAA+AGG | - | chr4_4:50169414-50169433 | Msa0685890:intron | 35.0% | |
! | GATTCTCTCTAATTTGCCTT+TGG | - | chr4_4:50169444-50169463 | Msa0685890:CDS | 35.0% |
! | TCTAATTTGCCTTTGGCTAT+TGG | - | chr4_4:50169451-50169470 | Msa0685890:CDS | 35.0% |
AACATTTCTCCAATAGCCAA+AGG | + | chr4_4:50169463-50169482 | None:intergenic | 35.0% | |
TTCCTCAAGTTTGTGAATTG+TGG | - | chr4_4:50169820-50169839 | Msa0685890:intron | 35.0% | |
TCCTCAAGTTTGTGAATTGT+GGG | - | chr4_4:50169821-50169840 | Msa0685890:intron | 35.0% | |
GTATATGTTTACTTCTACCG+TGG | - | chr4_4:50169928-50169947 | Msa0685890:intron | 35.0% | |
AGTCTAAAAATCACGATCGA+AGG | - | chr4_4:50170044-50170063 | Msa0685890:CDS | 35.0% | |
!! | ACATGTTTGCATTCGCTTTT+GGG | + | chr4_4:50170189-50170208 | None:intergenic | 35.0% |
! | TACATGTTTGCATTCGCTTT+TGG | + | chr4_4:50170190-50170209 | None:intergenic | 35.0% |
AATACATGTGATCGAAACCA+AGG | + | chr4_4:50170336-50170355 | None:intergenic | 35.0% | |
CCCTATATTTCTTGCAATGT+TGG | - | chr4_4:50170360-50170379 | Msa0685890:intron | 35.0% | |
GCCAACATTGCAAGAAATAT+AGG | + | chr4_4:50170364-50170383 | None:intergenic | 35.0% | |
!!! | CTTTTTGAAACCTTGATGAG+TGG | + | chr4_4:50170433-50170452 | None:intergenic | 35.0% |
CACTCATCAAGGTTTCAAAA+AGG | - | chr4_4:50170431-50170450 | Msa0685890:intron | 35.0% | |
! | GGTTTCAAAAAGGTTTGGTT+TGG | - | chr4_4:50170441-50170460 | Msa0685890:intron | 35.0% |
! | TATAGCACTGCTGTTGATAA+TGG | - | chr4_4:50170876-50170895 | Msa0685890:CDS | 35.0% |
!! | ATAGCACTGCTGTTGATAAT+GGG | - | chr4_4:50170877-50170896 | Msa0685890:CDS | 35.0% |
TCATGTCAACAGATTCTCTA+TGG | - | chr4_4:50171035-50171054 | Msa0685890:intron | 35.0% | |
! | TACACTTTGACTTATTCTGG+TGG | + | chr4_4:50171148-50171167 | None:intergenic | 35.0% |
! | TTTTCCATCCATGTTCAAGA+GGG | + | chr4_4:50171273-50171292 | None:intergenic | 35.0% |
TGGATGGAAAAGAAGTAATG+AGG | - | chr4_4:50171282-50171301 | Msa0685890:CDS | 35.0% | |
!! | AACGACCCTTTAAGATATGA+TGG | - | chr4_4:50171320-50171339 | Msa0685890:CDS | 35.0% |
CAAATTCTCAAGGACAATGA+AGG | - | chr4_4:50171383-50171402 | Msa0685890:CDS | 35.0% | |
CAATGAAGGACCTTATAACT+TGG | - | chr4_4:50171397-50171416 | Msa0685890:CDS | 35.0% | |
GTTAACTCTCCTGATGTTAA+AGG | - | chr4_4:50171485-50171504 | Msa0685890:intron | 35.0% | |
ACGAGTCTTTAGTGTATGAT+TGG | - | chr4_4:50171812-50171831 | Msa0685890:CDS | 35.0% | |
CGAGTCTTTAGTGTATGATT+GGG | - | chr4_4:50171813-50171832 | Msa0685890:CDS | 35.0% | |
GAGTCTTTAGTGTATGATTG+GGG | - | chr4_4:50171814-50171833 | Msa0685890:CDS | 35.0% | |
AGTCTTTAGTGTATGATTGG+GGG | - | chr4_4:50171815-50171834 | Msa0685890:CDS | 35.0% | |
TATCAAGTCCTAGTCTGTAA+TGG | + | chr4_4:50171985-50172004 | None:intergenic | 35.0% | |
TAGGACTTGATATGTCATTC+TGG | - | chr4_4:50171993-50172012 | Msa0685890:intron | 35.0% | |
!! | TTGATTGGGAGCTTTGAATT+AGG | + | chr4_4:50172152-50172171 | None:intergenic | 35.0% |
CAGCTATTTATCTCATTCAC+AGG | - | chr4_4:50172391-50172410 | Msa0685890:intron | 35.0% | |
ATCTAAGCAAACTGATAGCA+TGG | - | chr4_4:50172775-50172794 | Msa0685890:CDS | 35.0% | |
!!! | TTGTTGCTTTTGAGACATCA+AGG | - | chr4_4:50172809-50172828 | Msa0685890:CDS | 35.0% |
AACATACAAATTGGATGCGA+TGG | - | chr4_4:50172908-50172927 | Msa0685890:CDS | 35.0% | |
GACATAAGAACTTTGGTATC+TGG | + | chr4_4:50173040-50173059 | None:intergenic | 35.0% | |
!! | TATCATTTTTGCCCCTCATT+TGG | - | chr4_4:50173063-50173082 | Msa0685890:CDS | 35.0% |
!! | ATCATTTTTGCCCCTCATTT+GGG | - | chr4_4:50173064-50173083 | Msa0685890:CDS | 35.0% |
ACTATTCATCTCCCAAATGA+GGG | + | chr4_4:50173078-50173097 | None:intergenic | 35.0% | |
TACTATTCATCTCCCAAATG+AGG | + | chr4_4:50173079-50173098 | None:intergenic | 35.0% | |
CAACTGCAAACTGTACATTA+TGG | + | chr4_4:50173121-50173140 | None:intergenic | 35.0% | |
CAGTTTCAGTTTCCAGTTTG+AGG | + | chr4_4:50169097-50169116 | None:intergenic | 40.0% | |
TGTGTCACATGATGTCTTTG+AGG | - | chr4_4:50169134-50169153 | Msa0685890:CDS | 40.0% | |
!!! | GTTTTTGAGGTTGCAGTTGA+TGG | + | chr4_4:50169254-50169273 | None:intergenic | 40.0% |
CAACTGCAACCTCAAAAACA+AGG | - | chr4_4:50169255-50169274 | Msa0685890:intron | 40.0% | |
!! | TTCTGGTTCTTTGAGCTTAC+TGG | + | chr4_4:50169379-50169398 | None:intergenic | 40.0% |
GTAAGCTCAAAGAACCAGAA+AGG | - | chr4_4:50169379-50169398 | Msa0685890:intron | 40.0% | |
AAGAACCAGAAAGGTCCTTA+TGG | - | chr4_4:50169388-50169407 | Msa0685890:intron | 40.0% | |
AACTTCTTGACCACACCATA+AGG | + | chr4_4:50169406-50169425 | None:intergenic | 40.0% | |
ACCCACAATTCACAAACTTG+AGG | + | chr4_4:50169825-50169844 | None:intergenic | 40.0% | |
CTAACACAGGATGATCTTCA+GGG | + | chr4_4:50170285-50170304 | None:intergenic | 40.0% | |
!! | TGGAGATGGATTTTCTTCCT+TGG | - | chr4_4:50170316-50170335 | Msa0685890:intron | 40.0% |
TATAAGGGATGCACCAAGAA+GGG | + | chr4_4:50170386-50170405 | None:intergenic | 40.0% | |
TGTGTAAGTGCAGGCTATAA+GGG | + | chr4_4:50170401-50170420 | None:intergenic | 40.0% | |
TTGTGTAAGTGCAGGCTATA+AGG | + | chr4_4:50170402-50170421 | None:intergenic | 40.0% | |
TACGAAACAAATAAGGCCCT+GGG | + | chr4_4:50170517-50170536 | None:intergenic | 40.0% | |
GACCACCTACGAAACAAATA+AGG | + | chr4_4:50170524-50170543 | None:intergenic | 40.0% | |
CTCTTGCTTACGTATAACCT+CGG | + | chr4_4:50170561-50170580 | None:intergenic | 40.0% | |
ACATCTTGGATTGATGCTCT+TGG | + | chr4_4:50170599-50170618 | None:intergenic | 40.0% | |
! | AGAGCATCAATCCAAGATGT+TGG | - | chr4_4:50170599-50170618 | Msa0685890:intron | 40.0% |
! | CCACGAAAAGCATACAAAGT+TGG | + | chr4_4:50170823-50170842 | None:intergenic | 40.0% |
! | CCAACTTTGTATGCTTTTCG+TGG | - | chr4_4:50170820-50170839 | Msa0685890:CDS | 40.0% |
! | TTTGTTGTAGGAGACGTTCT+CGG | - | chr4_4:50170964-50170983 | Msa0685890:CDS | 40.0% |
AGTTGGAAAGGAAAGAAAGC+CGG | + | chr4_4:50170995-50171014 | None:intergenic | 40.0% | |
GGATTATTATGAAAGTGGGG+AGG | - | chr4_4:50171056-50171075 | Msa0685890:intron | 40.0% | |
CATGTTCAAGAGGGAAAGAT+CGG | + | chr4_4:50171264-50171283 | None:intergenic | 40.0% | |
! | CTTTTCCATCCATGTTCAAG+AGG | + | chr4_4:50171274-50171293 | None:intergenic | 40.0% |
TGGTATCACCATATACCAGA+CGG | - | chr4_4:50171340-50171359 | Msa0685890:CDS | 40.0% | |
TTCAGCTCTGCAAATTCTCA+AGG | - | chr4_4:50171373-50171392 | Msa0685890:CDS | 40.0% | |
AGGACCTTATAACTTGGCTA+TGG | - | chr4_4:50171403-50171422 | Msa0685890:CDS | 40.0% | |
! | ATGGCACCTCTAAAGATCAA+TGG | - | chr4_4:50171422-50171441 | Msa0685890:intron | 40.0% |
! | TATGGTACTTTTCTACCGGT+TGG | - | chr4_4:50171458-50171477 | Msa0685890:intron | 40.0% |
TGAGTGTTTACGAAAGCTTG+TGG | - | chr4_4:50171664-50171683 | Msa0685890:CDS | 40.0% | |
CATAAAGGACAATTGACTGC+AGG | + | chr4_4:50172097-50172116 | None:intergenic | 40.0% | |
GATAAGGAAGGGAAATTTGC+AGG | - | chr4_4:50172116-50172135 | Msa0685890:intron | 40.0% | |
AAGCTCCCAATCAACATTGA+CGG | - | chr4_4:50172158-50172177 | Msa0685890:intron | 40.0% | |
ATTGTCGTTGTGGATGCAAT+AGG | - | chr4_4:50172188-50172207 | Msa0685890:intron | 40.0% | |
AAGCAATAGGTCAGTGACAA+AGG | + | chr4_4:50172291-50172310 | None:intergenic | 40.0% | |
TATGTTATGCAGACTGATCC+TGG | - | chr4_4:50172317-50172336 | Msa0685890:intron | 40.0% | |
CCAAATCCAGCATATACAAC+TGG | + | chr4_4:50172347-50172366 | None:intergenic | 40.0% | |
CCAGTTGTATATGCTGGATT+TGG | - | chr4_4:50172344-50172363 | Msa0685890:intron | 40.0% | |
AAGATATGGGCCTTACAAGA+TGG | - | chr4_4:50172644-50172663 | Msa0685890:intron | 40.0% | |
GACTGTTGTTCCATCTTGTA+AGG | + | chr4_4:50172657-50172676 | None:intergenic | 40.0% | |
GATGGAACAACAGTCGTTAT+TGG | - | chr4_4:50172662-50172681 | Msa0685890:intron | 40.0% | |
GAACAACAGTCGTTATTGGA+GGG | - | chr4_4:50172666-50172685 | Msa0685890:intron | 40.0% | |
CAGAGCAAAGTTAGAGTTTC+CGG | - | chr4_4:50172697-50172716 | Msa0685890:intron | 40.0% | |
CTATTCATCTCCCAAATGAG+GGG | + | chr4_4:50173077-50173096 | None:intergenic | 40.0% | |
!! | GCAGTTGATGGTGAATGAGA+GGG | + | chr4_4:50169242-50169261 | None:intergenic | 45.0% |
!! | TGCAGTTGATGGTGAATGAG+AGG | + | chr4_4:50169243-50169262 | None:intergenic | 45.0% |
TCATCATTCTCCTGTGTGAG+TGG | + | chr4_4:50169337-50169356 | None:intergenic | 45.0% | |
! | GCAGGCACTTTTATTGACCA+AGG | - | chr4_4:50170229-50170248 | Msa0685890:intron | 45.0% |
AAAACTCAGGTTTCTCGCCT+TGG | + | chr4_4:50170249-50170268 | None:intergenic | 45.0% | |
GATGATCTTCAGGGTAGTTC+TGG | + | chr4_4:50170276-50170295 | None:intergenic | 45.0% | |
CCTAACACAGGATGATCTTC+AGG | + | chr4_4:50170286-50170305 | None:intergenic | 45.0% | |
CCTGAAGATCATCCTGTGTT+AGG | - | chr4_4:50170283-50170302 | Msa0685890:intron | 45.0% | |
CTATAAGGGATGCACCAAGA+AGG | + | chr4_4:50170387-50170406 | None:intergenic | 45.0% | |
GAGTTGTGTTGTGTAAGTGC+AGG | + | chr4_4:50170410-50170429 | None:intergenic | 45.0% | |
AACACAACTCCCACTCATCA+AGG | - | chr4_4:50170420-50170439 | Msa0685890:intron | 45.0% | |
CAGCATTTCTTGATCACCCA+GGG | - | chr4_4:50170498-50170517 | Msa0685890:intron | 45.0% | |
CTACGAAACAAATAAGGCCC+TGG | + | chr4_4:50170518-50170537 | None:intergenic | 45.0% | |
!! | CAGGGCCTTATTTGTTTCGT+AGG | - | chr4_4:50170516-50170535 | Msa0685890:intron | 45.0% |
!! | GGCCTTATTTGTTTCGTAGG+TGG | - | chr4_4:50170519-50170538 | Msa0685890:intron | 45.0% |
GGTACTATACTAATGGGAGC+TGG | - | chr4_4:50170620-50170639 | Msa0685890:intron | 45.0% | |
ACTAATGGGAGCTGGATATG+AGG | - | chr4_4:50170628-50170647 | Msa0685890:intron | 45.0% | |
! | TATGCTTTTCGTGGACTTGC+CGG | - | chr4_4:50170829-50170848 | Msa0685890:CDS | 45.0% |
TGCTATATGAACGCCAACAG+GGG | + | chr4_4:50170863-50170882 | None:intergenic | 45.0% | |
GTGCTATATGAACGCCAACA+GGG | + | chr4_4:50170864-50170883 | None:intergenic | 45.0% | |
AGTGCTATATGAACGCCAAC+AGG | + | chr4_4:50170865-50170884 | None:intergenic | 45.0% | |
! | GAGGAACTTTAAGTGCTGCA+GGG | - | chr4_4:50170902-50170921 | Msa0685890:CDS | 45.0% |
ACAACAAAATTCAGCCCCTG+AGG | + | chr4_4:50170952-50170971 | None:intergenic | 45.0% | |
!! | CAGGGGCTGAATTTTGTTGT+AGG | - | chr4_4:50170952-50170971 | Msa0685890:CDS | 45.0% |
GAAAGTGGGGAGGTAAATGT+TGG | - | chr4_4:50171066-50171085 | Msa0685890:intron | 45.0% | |
CGATCTTTCCCTCTTGAACA+TGG | - | chr4_4:50171262-50171281 | Msa0685890:CDS | 45.0% | |
CTTTCCCTCTTGAACATGGA+TGG | - | chr4_4:50171266-50171285 | Msa0685890:CDS | 45.0% | |
TCACCATATACCAGACGGAT+TGG | - | chr4_4:50171345-50171364 | Msa0685890:CDS | 45.0% | |
ACTCCAATCCGTCTGGTATA+TGG | + | chr4_4:50171351-50171370 | None:intergenic | 45.0% | |
CTGAAATACTCCAATCCGTC+TGG | + | chr4_4:50171358-50171377 | None:intergenic | 45.0% | |
! | GGTGCCATAGCCAAGTTATA+AGG | + | chr4_4:50171410-50171429 | None:intergenic | 45.0% |
GGAGAGTTAACATCTCCAAC+CGG | + | chr4_4:50171476-50171495 | None:intergenic | 45.0% | |
AAGGACCACCATTACAGACT+AGG | - | chr4_4:50171974-50171993 | Msa0685890:CDS | 45.0% | |
CAAGTCCTAGTCTGTAATGG+TGG | + | chr4_4:50171982-50172001 | None:intergenic | 45.0% | |
! | CTGAGCCGTCAATGTTGATT+GGG | + | chr4_4:50172166-50172185 | None:intergenic | 45.0% |
TCTGAGCCGTCAATGTTGAT+TGG | + | chr4_4:50172167-50172186 | None:intergenic | 45.0% | |
GGAACAACAGTCGTTATTGG+AGG | - | chr4_4:50172665-50172684 | Msa0685890:intron | 45.0% | |
! | CAGGGATTTTGTCAAGCAAG+AGG | + | chr4_4:50172733-50172752 | None:intergenic | 45.0% |
!!! | TTTTTATAAATATCTTAATT+AGG | + | chr4_4:50169752-50169771 | None:intergenic | 5.0% |
!!! | TTCAAAAATAAATTATTTTA+CGG | + | chr4_4:50169999-50170018 | None:intergenic | 5.0% |
!!! | TTTTAATATATAATTAAACA+TGG | + | chr4_4:50172598-50172617 | None:intergenic | 5.0% |
!!! | TTATTTTTATTTTATTTGAT+AGG | - | chr4_4:50173013-50173032 | Msa0685890:CDS | 5.0% |
!!! | TATTTTTATTTTATTTGATA+GGG | - | chr4_4:50173014-50173033 | Msa0685890:CDS | 5.0% |
TCATTCTCCTGTGTGAGTGG+TGG | + | chr4_4:50169334-50169353 | None:intergenic | 50.0% | |
CCACACCATAAGGACCTTTC+TGG | + | chr4_4:50169396-50169415 | None:intergenic | 50.0% | |
CCAGAAAGGTCCTTATGGTG+TGG | - | chr4_4:50169393-50169412 | Msa0685890:intron | 50.0% | |
CTTGCAATGTTGGCCCTTCT+TGG | - | chr4_4:50170370-50170389 | Msa0685890:intron | 50.0% | |
GCAGCATTTCTTGATCACCC+AGG | - | chr4_4:50170497-50170516 | Msa0685890:intron | 50.0% | |
GTCATTTATCCACTCTGCCG+AGG | - | chr4_4:50170541-50170560 | Msa0685890:intron | 50.0% | |
TACGTATAACCTCGGCAGAG+TGG | + | chr4_4:50170553-50170572 | None:intergenic | 50.0% | |
!! | GCACTGCTGTTGATAATGGG+TGG | - | chr4_4:50170880-50170899 | Msa0685890:CDS | 50.0% |
!! | CTGCTGTTGATAATGGGTGG+AGG | - | chr4_4:50170883-50170902 | Msa0685890:CDS | 50.0% |
! | GGAGGAACTTTAAGTGCTGC+AGG | - | chr4_4:50170901-50170920 | Msa0685890:CDS | 50.0% |
! | AGTGCTGCAGGGAGCTTTAA+AGG | - | chr4_4:50170913-50170932 | Msa0685890:CDS | 50.0% |
GGAAAGGAAAGAAAGCCGGT+AGG | + | chr4_4:50170991-50171010 | None:intergenic | 50.0% | |
CGGCTCAGAAATTGTCGTTG+TGG | - | chr4_4:50172178-50172197 | Msa0685890:intron | 50.0% | |
GTGGATGCAATAGGCAGTAG+TGG | - | chr4_4:50172197-50172216 | Msa0685890:intron | 50.0% | |
TGCAATAGGCAGTAGTGGCT+TGG | - | chr4_4:50172202-50172221 | Msa0685890:intron | 50.0% | |
! | CAGTAGTGGCTTGGACTTGA+AGG | - | chr4_4:50172211-50172230 | Msa0685890:intron | 50.0% |
GTGTGAGCTTAAGCCAAGTC+TGG | - | chr4_4:50172233-50172252 | Msa0685890:intron | 50.0% | |
AGCAAGAGGTTCATCTCGTC+CGG | + | chr4_4:50172719-50172738 | None:intergenic | 50.0% | |
TTCTCCTCCACCACTCACAC+AGG | - | chr4_4:50169324-50169343 | Msa0685890:intron | 55.0% | |
TTCTCCTGTGTGAGTGGTGG+AGG | + | chr4_4:50169331-50169350 | None:intergenic | 55.0% | |
! | CTTTTCGTGGACTTGCCGGT+CGG | - | chr4_4:50170833-50170852 | Msa0685890:CDS | 55.0% |
AGGTTCAGTCACTGTGCCTC+AGG | - | chr4_4:50170933-50170952 | Msa0685890:CDS | 55.0% | |
GGTTCAGTCACTGTGCCTCA+GGG | - | chr4_4:50170934-50170953 | Msa0685890:CDS | 55.0% | |
GTTCAGTCACTGTGCCTCAG+GGG | - | chr4_4:50170935-50170954 | Msa0685890:CDS | 55.0% | |
GCATATACAACTGGCACGCC+AGG | + | chr4_4:50172338-50172357 | None:intergenic | 55.0% | |
GGCGTGCCAGTTGTATATGC+TGG | - | chr4_4:50172338-50172357 | Msa0685890:intron | 55.0% | |
GGAGACGTTCTCGGTCCTAC+CGG | - | chr4_4:50170973-50170992 | Msa0685890:CDS | 60.0% | |
!! | GCCAACAGGGGCTAGCCGAC+CGG | + | chr4_4:50170851-50170870 | None:intergenic | 70.0% |
! | GCCGGTCGGCTAGCCCCTGT+TGG | - | chr4_4:50170847-50170866 | Msa0685890:CDS | 75.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr4_4 | gene | 50169086 | 50173151 | 50169086 | ID=Msa0685890;Name=Msa0685890 |
chr4_4 | mRNA | 50169086 | 50173151 | 50169086 | ID=Msa0685890-mRNA-1;Parent=Msa0685890;Name=Msa0685890-mRNA-1;_AED=0.14;_eAED=0.14;_QI=47|0.66|0.7|0.9|1|1|10|0|586 |
chr4_4 | exon | 50169086 | 50169202 | 50169086 | ID=Msa0685890-mRNA-1:exon:12777;Parent=Msa0685890-mRNA-1 |
chr4_4 | exon | 50169441 | 50169590 | 50169441 | ID=Msa0685890-mRNA-1:exon:12776;Parent=Msa0685890-mRNA-1 |
chr4_4 | exon | 50169714 | 50169719 | 50169714 | ID=Msa0685890-mRNA-1:exon:12775;Parent=Msa0685890-mRNA-1 |
chr4_4 | exon | 50169825 | 50169908 | 50169825 | ID=Msa0685890-mRNA-1:exon:12774;Parent=Msa0685890-mRNA-1 |
chr4_4 | exon | 50170005 | 50170161 | 50170005 | ID=Msa0685890-mRNA-1:exon:12773;Parent=Msa0685890-mRNA-1 |
chr4_4 | exon | 50170727 | 50170992 | 50170727 | ID=Msa0685890-mRNA-1:exon:12772;Parent=Msa0685890-mRNA-1 |
chr4_4 | exon | 50171160 | 50171432 | 50171160 | ID=Msa0685890-mRNA-1:exon:12771;Parent=Msa0685890-mRNA-1 |
chr4_4 | exon | 50171588 | 50171699 | 50171588 | ID=Msa0685890-mRNA-1:exon:12770;Parent=Msa0685890-mRNA-1 |
chr4_4 | exon | 50171785 | 50172004 | 50171785 | ID=Msa0685890-mRNA-1:exon:12769;Parent=Msa0685890-mRNA-1 |
chr4_4 | exon | 50172729 | 50173151 | 50172729 | ID=Msa0685890-mRNA-1:exon:12768;Parent=Msa0685890-mRNA-1 |
chr4_4 | five_prime_UTR | 50173105 | 50173151 | 50173105 | ID=Msa0685890-mRNA-1:five_prime_utr;Parent=Msa0685890-mRNA-1 |
chr4_4 | CDS | 50172729 | 50173104 | 50172729 | ID=Msa0685890-mRNA-1:cds;Parent=Msa0685890-mRNA-1 |
chr4_4 | CDS | 50171785 | 50172004 | 50171785 | ID=Msa0685890-mRNA-1:cds;Parent=Msa0685890-mRNA-1 |
chr4_4 | CDS | 50171588 | 50171699 | 50171588 | ID=Msa0685890-mRNA-1:cds;Parent=Msa0685890-mRNA-1 |
chr4_4 | CDS | 50171160 | 50171432 | 50171160 | ID=Msa0685890-mRNA-1:cds;Parent=Msa0685890-mRNA-1 |
chr4_4 | CDS | 50170727 | 50170992 | 50170727 | ID=Msa0685890-mRNA-1:cds;Parent=Msa0685890-mRNA-1 |
chr4_4 | CDS | 50170005 | 50170161 | 50170005 | ID=Msa0685890-mRNA-1:cds;Parent=Msa0685890-mRNA-1 |
chr4_4 | CDS | 50169825 | 50169908 | 50169825 | ID=Msa0685890-mRNA-1:cds;Parent=Msa0685890-mRNA-1 |
chr4_4 | CDS | 50169714 | 50169719 | 50169714 | ID=Msa0685890-mRNA-1:cds;Parent=Msa0685890-mRNA-1 |
chr4_4 | CDS | 50169441 | 50169590 | 50169441 | ID=Msa0685890-mRNA-1:cds;Parent=Msa0685890-mRNA-1 |
chr4_4 | CDS | 50169086 | 50169202 | 50169086 | ID=Msa0685890-mRNA-1:cds;Parent=Msa0685890-mRNA-1 |
Gene Sequence |
Protein sequence |