AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1177960


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1177960 MtrunA17_Chr8g0348761 95.408 588 27 0 1 588 1 588 0.0 1129
Msa1177960 MtrunA17_Chr7g0247871 75.212 589 90 6 1 588 1 534 0.0 856
Msa1177960 MtrunA17_Chr3g0104361 79.398 432 89 0 157 588 85 516 0.0 729
Msa1177960 MtrunA17_Chr7g0241591 37.751 498 300 5 99 587 10 506 2.74e-111 342
Msa1177960 MtrunA17_Chr4g0064801 38.224 518 299 7 76 584 19 524 3.81e-108 335
Msa1177960 MtrunA17_Chr5g0429461 40.547 402 232 2 192 586 189 590 3.73e-97 308
Msa1177960 MtrunA17_Chr4g0013731 36.937 444 250 5 173 588 2 443 5.90e-86 274
Msa1177960 MtrunA17_Chr2g0290941 96.970 132 4 0 420 551 1 132 5.43e-85 261
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1177960 AT4G00370.1 71.622 592 113 8 1 588 1 541 0.0 824
Msa1177960 AT2G29650.1 81.384 419 78 0 170 588 94 512 0.0 719
Msa1177960 AT2G29650.3 80.457 394 77 0 195 588 7 400 0.0 659
Msa1177960 AT2G29650.4 80.769 390 75 0 199 588 1 390 0.0 655
Msa1177960 AT2G29650.2 80.984 305 58 0 170 474 94 398 0.0 521
Msa1177960 AT2G38060.1 37.247 494 290 5 100 587 33 512 1.47e-111 343
Msa1177960 AT5G20380.1 41.099 455 240 10 146 584 66 508 2.63e-105 327
Msa1177960 AT5G20380.2 41.099 455 240 10 146 584 118 560 1.14e-104 327
Msa1177960 AT3G46980.1 39.907 431 249 3 166 586 97 527 5.15e-101 317
Msa1177960 AT3G46980.3 39.907 431 249 3 166 586 97 527 6.35e-101 317
Msa1177960 AT3G46980.4 39.907 431 249 3 166 586 145 575 7.36e-101 318
Msa1177960 AT2G38060.2 36.902 439 258 4 100 533 33 457 2.00e-95 303
Msa1177960 AT5G44370.1 36.195 431 258 5 173 588 4 432 2.51e-84 270
Msa1177960 AT3G46980.8 38.905 347 204 2 248 586 1 347 1.45e-77 249
Msa1177960 AT3G46980.2 38.905 347 204 2 248 586 1 347 1.45e-77 249
Msa1177960 AT3G46980.5 38.905 347 204 2 248 586 1 347 1.63e-77 249
Msa1177960 AT3G46980.7 38.905 347 204 2 248 586 1 347 1.63e-77 249
Msa1177960 AT3G46980.6 36.879 282 170 2 313 586 2 283 2.21e-55 189

Find 174 sgRNAs with CRISPR-Local

Find 374 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GCTTGTTATGCGTGCCTTTA+TGG 0.129125 8_1:-10477726 Msa1177960:CDS
AGAGGAGGCATTTCGGTTTC+TGG 0.146292 8_1:-10479063 Msa1177960:CDS
AGCATTTCTGCTTTGTAATA+TGG 0.170036 8_1:-10478596 Msa1177960:CDS
TATGAGAATGCATTGCATTT+TGG 0.194319 8_1:+10478986 None:intergenic
TTCTCATATTGATTCTTCTT+TGG 0.202623 8_1:-10478971 Msa1177960:CDS
GTTAATCCAAGATTTCTTTC+TGG 0.214224 8_1:+10474353 None:intergenic
TTCAACACCGCTACTGTTAA+AGG 0.224657 8_1:+10478810 None:intergenic
CTTGTTATGCGTGCCTTTAT+GGG 0.263324 8_1:-10477725 Msa1177960:CDS
TCTGTTGTATTGTACTTAAT+TGG 0.264228 8_1:-10474627 Msa1177960:CDS
CCATCTGTGTTCTACTCATT+TGG 0.272517 8_1:-10477432 Msa1177960:CDS
TTCCAAGTGCATGACATATT+TGG 0.276652 8_1:+10474458 None:intergenic
TTGGATCACTTGGCAGTATC+TGG 0.287315 8_1:-10477413 Msa1177960:CDS
GGGAAGCTAGTACTGGGTTT+TGG 0.288980 8_1:-10477815 Msa1177960:CDS
TCTCATATTGATTCTTCTTT+GGG 0.289517 8_1:-10478970 Msa1177960:CDS
TATGCTTGAATGAAGTTATA+GGG 0.294979 8_1:+10474270 None:intergenic
TTATATTTATACTTAGAATA+AGG 0.295878 8_1:-10474246 Msa1177960:three_prime_UTR
CTTGGTTCTGTCACAGGCTT+GGG 0.299031 8_1:-10477489 Msa1177960:CDS
TCGGATGTTTGTATTTGTTT+TGG 0.304643 8_1:+10478937 None:intergenic
TTGATTTCCAACCGCAATTT+CGG 0.305643 8_1:-10479913 Msa1177960:CDS
AAGTTCAACCTCACGGAATC+TGG 0.305964 8_1:-10475950 Msa1177960:CDS
TTCAGATTGCTGGTGGCATA+TGG 0.312702 8_1:-10477853 Msa1177960:intron
TCGTACTCAGCTGAGAAAAT+AGG 0.318466 8_1:-10474151 Msa1177960:three_prime_UTR
TTCTCTTCATCCCCAAGATC+TGG 0.321969 8_1:+10476743 None:intergenic
CTCTCACTTCTGCCACAATT+GGG 0.335802 8_1:-10476624 Msa1177960:CDS
GAAAGAATGTTATTCATTGC+AGG 0.338230 8_1:+10477573 None:intergenic
ATATGCTTGAATGAAGTTAT+AGG 0.344184 8_1:+10474269 None:intergenic
ATAATACCAGGGAGTGTTAC+TGG 0.344321 8_1:-10474825 Msa1177960:intron
TGCCTTTCGAACAGTTGTTA+TGG 0.352192 8_1:+10475838 None:intergenic
ACTCCTGTTGCTGCAAAACT+TGG 0.364356 8_1:-10477761 Msa1177960:CDS
CTCCGATACTGGAATCCATT+TGG 0.365732 8_1:+10477551 None:intergenic
GACCGGTGAAGCCATTCTTC+TGG 0.369802 8_1:-10478695 Msa1177960:CDS
ACTTAATTGGCACTTTGGTC+TGG 0.371702 8_1:-10474614 Msa1177960:CDS
CAATGTCTCAACAGTTCAAC+TGG 0.375074 8_1:-10478164 Msa1177960:CDS
CCGAAATGCCTCCTCTTTGA+TGG 0.376112 8_1:+10479070 None:intergenic
CAGCTGAGAAAATAGGTTGC+AGG 0.376789 8_1:-10474144 Msa1177960:three_prime_UTR
TCTCTCACTTCTGCCACAAT+TGG 0.376790 8_1:-10476625 Msa1177960:CDS
GATCTGCTTCTCTCCGATAC+TGG 0.378405 8_1:+10477540 None:intergenic
CCTTGGTTCTGTCACAGGCT+TGG 0.378848 8_1:-10477490 Msa1177960:CDS
ATGCGTGCCTTTATGGGAAT+TGG 0.379521 8_1:-10477719 Msa1177960:CDS
TGGCTGCATTGTCGAGATAA+TGG 0.387101 8_1:+10478892 None:intergenic
CCATCAAAGAGGAGGCATTT+CGG 0.389868 8_1:-10479070 Msa1177960:CDS
CAGATTTCCTTCCAGAAGAA+TGG 0.390447 8_1:+10478684 None:intergenic
GGTTGCAGCCTATCTATATT+CGG 0.392462 8_1:+10478727 None:intergenic
CCAAAGGATGATCCAGATCT+TGG 0.396433 8_1:-10476755 Msa1177960:CDS
GATTTGTTGTTGCAGGTTCA+TGG 0.401967 8_1:-10474668 Msa1177960:intron
ATGTACCTTGGTTCTGTCAC+AGG 0.409334 8_1:-10477495 Msa1177960:CDS
TACAAACATCCGATAACAAA+AGG 0.409479 8_1:-10478927 Msa1177960:CDS
TTCGGTTCTTTCATTGCCTC+AGG 0.411206 8_1:-10479895 Msa1177960:intron
TTCTACTCATTTGGATCACT+TGG 0.415265 8_1:-10477423 Msa1177960:CDS
GGAGTGCTTGCCGGTGTCTT+CGG 0.418800 8_1:-10474785 Msa1177960:CDS
CAAAGGATGATCCAGATCTT+GGG 0.418975 8_1:-10476754 Msa1177960:CDS
TGAATAACATTCTTTCCAAA+TGG 0.420949 8_1:-10477566 Msa1177960:CDS
ATTGTGTATGGCTTGCAGTC+AGG 0.427640 8_1:-10475517 Msa1177960:intron
TTCTGTATAGATATAGTTTG+TGG 0.430040 8_1:-10474304 Msa1177960:three_prime_UTR
CGGTAACACGGTGTGGTGGT+TGG 0.431864 8_1:-10479035 Msa1177960:CDS
GGTAACACGGTGTGGTGGTT+GGG 0.433771 8_1:-10479034 Msa1177960:CDS
GACTATTATGTGTCCTTCCA+TGG 0.434160 8_1:-10475928 Msa1177960:CDS
TTCCAAATGGATTCCAGTAT+CGG 0.436067 8_1:-10477553 Msa1177960:CDS
TACAGAAAGCATTTAGATCA+TGG 0.437493 8_1:+10474320 None:intergenic
CCAAGATCTGGATCATCCTT+TGG 0.441260 8_1:+10476755 None:intergenic
AACCTGTGACAGTTATTCCT+TGG 0.441713 8_1:-10476688 Msa1177960:CDS
AACCTCGCCAATTCCCATAA+AGG 0.444419 8_1:+10477712 None:intergenic
AGTGACTCTTCTATTTCAGC+AGG 0.451506 8_1:+10474417 None:intergenic
TCTGTATAGATATAGTTTGT+GGG 0.451577 8_1:-10474303 Msa1177960:three_prime_UTR
GGCAGCAGTTTCCTAAGCGA+TGG 0.452104 8_1:-10478642 Msa1177960:CDS
TAAGTTTCATGTTCGTTACA+AGG 0.458773 8_1:-10478773 Msa1177960:CDS
AGTTGGTGGGAAGCTAGTAC+TGG 0.459766 8_1:-10477822 Msa1177960:CDS
TCAACACCGCTACTGTTAAA+GGG 0.469349 8_1:+10478811 None:intergenic
TTTCAAAGAGGGAAAAGTAA+AGG 0.469416 8_1:-10474500 Msa1177960:three_prime_UTR
GGCAGATCATGCAATCGATC+GGG 0.470030 8_1:-10475602 Msa1177960:intron
GCACGCATAACAAGCAGATA+TGG 0.471379 8_1:+10477734 None:intergenic
CGCCATGGCAGTATTGTGTA+TGG 0.478268 8_1:-10475529 Msa1177960:CDS
ATTGTACTTAATTGGCACTT+TGG 0.479006 8_1:-10474619 Msa1177960:CDS
TCAGATTGCTGGTGGCATAT+GGG 0.484302 8_1:-10477852 Msa1177960:intron
TTTGTCAAAAGCACCTGTCT+GGG 0.486680 8_1:-10476657 Msa1177960:CDS
TGGTCCAATGTCTTGGTGAT+TGG 0.488029 8_1:+10475362 None:intergenic
TTCCAGAAGAATGGCTTCAC+CGG 0.490678 8_1:+10478693 None:intergenic
GAAGAGAAAAGGCTCATACT+TGG 0.491776 8_1:-10476728 Msa1177960:CDS
TCCCTCTTTGAAAATCTCTA+CGG 0.492120 8_1:+10474510 None:intergenic
TTGCAGAACCGAATATAGAT+AGG 0.497211 8_1:-10478735 Msa1177960:CDS
TTCCAAGGAATAACTGTCAC+AGG 0.499285 8_1:+10476686 None:intergenic
TTCCATAACAACTGTTCGAA+AGG 0.499560 8_1:-10475840 Msa1177960:intron
CAGTTGAACTGTTGAGACAT+TGG 0.503866 8_1:+10478165 None:intergenic
ATCTGCTTCAAACATCTCCT+TGG 0.506556 8_1:-10478666 Msa1177960:CDS
ACAACGACGTCGTTTCTAAG+TGG 0.509225 8_1:+10479980 None:intergenic
TTTGACAAAATCAATTTCCA+AGG 0.509264 8_1:+10476671 None:intergenic
TGCTTCAAACATCTCCTTGG+TGG 0.510898 8_1:-10478663 Msa1177960:CDS
CATTTCGGTTTCTGGTGTAT+CGG 0.515149 8_1:-10479055 Msa1177960:CDS
ATCTTGGGGATGAAGAGAAA+AGG 0.517687 8_1:-10476739 Msa1177960:CDS
CTGTCATCACTCACTATCAA+TGG 0.519742 8_1:-10479947 Msa1177960:exon
TCACTTGCGCTAGTATATAG+TGG 0.520640 8_1:-10477519 Msa1177960:CDS
TGTGACGCATTCTCACAATC+TGG 0.523013 8_1:-10475393 Msa1177960:CDS
AATACCGCAGGAGTGCTTGC+CGG 0.529217 8_1:-10474794 Msa1177960:CDS
AGTACAATAACCCATCGCTT+AGG 0.530839 8_1:+10478631 None:intergenic
TGGCAGATCATGCAATCGAT+CGG 0.531339 8_1:-10475603 Msa1177960:intron
GATGCCTACGTACTACAATC+AGG 0.534651 8_1:-10476579 Msa1177960:intron
TAATACCAGGGAGTGTTACT+GGG 0.535844 8_1:-10474824 Msa1177960:intron
TCTCACTTCTGCCACAATTG+GGG 0.536762 8_1:-10476623 Msa1177960:CDS
GGACATTTATTCTATTAACC+TGG 0.538351 8_1:-10476601 Msa1177960:CDS
CGAAATGCCTCCTCTTTGAT+GGG 0.539713 8_1:+10479071 None:intergenic
ATTGTAGTACGTAGGCATCC+AGG 0.540381 8_1:+10476583 None:intergenic
GTCTTCGGTACAGCTGCGAC+TGG 0.542029 8_1:-10474770 Msa1177960:CDS
ATGAAGAATTCTCACCTCGT+TGG 0.543233 8_1:+10474738 None:intergenic
CTCCTGTTGCTGCAAAACTT+GGG 0.543379 8_1:-10477760 Msa1177960:CDS
TGTTAAAGGGAGCTGAAGAA+AGG 0.544536 8_1:+10478824 None:intergenic
GCTTCACCGGTCCCATCAGT+TGG 0.547258 8_1:+10478706 None:intergenic
GGCATATGGGCAGACAAAGT+TGG 0.547316 8_1:-10477839 Msa1177960:CDS
TTAATTTGAAGTTCGAGCCA+TGG 0.549075 8_1:+10478872 None:intergenic
GAGAAAAGGCTCATACTTGG+AGG 0.555234 8_1:-10476725 Msa1177960:CDS
CATAGCGTGGTCCAATGTCT+TGG 0.556146 8_1:+10475355 None:intergenic
GACCAAATATGTCATGCACT+TGG 0.561215 8_1:-10474460 Msa1177960:three_prime_UTR
TATTCCAATCACCAAGACAT+TGG 0.563866 8_1:-10475366 Msa1177960:CDS
GAAAGAACCGAAATTGCGGT+TGG 0.564900 8_1:+10479906 None:intergenic
CGGCCATGGTTAACCATGGA+AGG 0.566548 8_1:+10475915 None:intergenic
GATAGGCTGCAACCAACTGA+TGG 0.566967 8_1:-10478718 Msa1177960:CDS
ACAAACATCCGATAACAAAA+GGG 0.567471 8_1:-10478926 Msa1177960:CDS
GTATATAGTGGCATGTACCT+TGG 0.570408 8_1:-10477507 Msa1177960:CDS
TCAGCTCCCTTTAACAGTAG+CGG 0.571175 8_1:-10478817 Msa1177960:CDS
ACAGAAAGCATTTAGATCAT+GGG 0.573908 8_1:+10474321 None:intergenic
GAGACTATTAAAGCCCAGAC+AGG 0.574976 8_1:+10476644 None:intergenic
ATACACAATACTGCCATGGC+GGG 0.575777 8_1:+10475531 None:intergenic
GTGTGGTGGTTGGGAAACGA+AGG 0.576332 8_1:-10479025 Msa1177960:CDS
GCAGCAGTTTCCTAAGCGAT+GGG 0.577771 8_1:-10478641 Msa1177960:CDS
GAATTCGTATAGATCACAAA+AGG 0.581532 8_1:-10479100 Msa1177960:CDS
GCAGTATCTGGTTTGCCTTG+TGG 0.583653 8_1:-10477401 Msa1177960:CDS
TTATCTCGACAATGCAGCCA+TGG 0.586541 8_1:-10478889 Msa1177960:CDS
GCTGATACACTTGTGAGCAA+AGG 0.586599 8_1:-10475866 Msa1177960:CDS
CAAAGAGGGAAAAGTAAAGG+TGG 0.589914 8_1:-10474497 Msa1177960:three_prime_UTR
ATAGGCTGCAACCAACTGAT+GGG 0.593919 8_1:-10478717 Msa1177960:CDS
ATGCTTGAATGAAGTTATAG+GGG 0.595235 8_1:+10474271 None:intergenic
CTGCAACCAACTGATGGGAC+CGG 0.596552 8_1:-10478712 Msa1177960:CDS
CAATGTCAGAACACCCGCCA+TGG 0.596846 8_1:-10475544 Msa1177960:CDS
AAAGGATGATCCAGATCTTG+GGG 0.601212 8_1:-10476753 Msa1177960:CDS
CCAAATGAGTAGAACACAGA+TGG 0.601541 8_1:+10477432 None:intergenic
CAATGAAAGAACCGAAATTG+CGG 0.616620 8_1:+10479902 None:intergenic
GTTGGTGGGAAGCTAGTACT+GGG 0.616621 8_1:-10477821 Msa1177960:CDS
AATTTCATAACATGAACAAG+AGG 0.618605 8_1:+10474096 None:intergenic
AACTGGAACAGTGCAACAGT+TGG 0.618878 8_1:-10478147 Msa1177960:CDS
CTCACTTCTGCCACAATTGG+GGG 0.622029 8_1:-10476622 Msa1177960:CDS
CTGGGGTTATCTACTCACAC+AGG 0.626084 8_1:-10478103 Msa1177960:intron
ATATGGGCAGACAAAGTTGG+TGG 0.627487 8_1:-10477836 Msa1177960:CDS
TATGGGCAGACAAAGTTGGT+GGG 0.628256 8_1:-10477835 Msa1177960:CDS
TTTCTGGTGTATCGGTAACA+CGG 0.628674 8_1:-10479047 Msa1177960:CDS
GGTTCTGAAGTTCAACCTCA+CGG 0.629465 8_1:-10475957 Msa1177960:CDS
AAAACGGCCATGGTTAACCA+TGG 0.630000 8_1:+10475911 None:intergenic
TGCCTTTATGGGAATTGGCG+AGG 0.631729 8_1:-10477714 Msa1177960:intron
GGTGAAGCCATTCTTCTGGA+AGG 0.631960 8_1:-10478691 Msa1177960:CDS
CTGGGACTATCGAATACCGC+AGG 0.635504 8_1:-10474806 Msa1177960:CDS
TTGATGTAGATAGAAGAGAG+AGG 0.636751 8_1:-10474063 Msa1177960:three_prime_UTR
TGTCCTTCCATGGTTAACCA+TGG 0.642053 8_1:-10475918 Msa1177960:CDS
AGCCATACACAATACTGCCA+TGG 0.643504 8_1:+10475527 None:intergenic
ACAGTAGCGGTGTTGAACAG+AGG 0.645119 8_1:-10478804 Msa1177960:CDS
GTGACTCTTCTATTTCAGCA+GGG 0.647909 8_1:+10474418 None:intergenic
TGTGGTGGTTGGGAAACGAA+GGG 0.649307 8_1:-10479024 Msa1177960:CDS
AGAATGTTATGACGATGTCA+AGG 0.650802 8_1:-10474552 Msa1177960:three_prime_UTR
AGCATTTAGATCATGGGACA+AGG 0.651752 8_1:+10474327 None:intergenic
CCAGGCATACAGCACACCAA+AGG 0.655145 8_1:-10476771 Msa1177960:intron
GACACCGGCAAGCACTCCTG+CGG 0.660186 8_1:+10474790 None:intergenic
AAGGATCTGTCCCATCAAAG+AGG 0.662737 8_1:-10479081 Msa1177960:CDS
TAGAAACTCACAGCATAGCG+TGG 0.667188 8_1:+10475342 None:intergenic
CGCAGCTGTACCGAAGACAC+CGG 0.674467 8_1:+10474775 None:intergenic
GATCTGTCCCATCAAAGAGG+AGG 0.676387 8_1:-10479078 Msa1177960:CDS
TTAGGAAACTGCTGCCACCA+AGG 0.677110 8_1:+10478649 None:intergenic
CATACACAATACTGCCATGG+CGG 0.677723 8_1:+10475530 None:intergenic
TTTCTCAGCTGAGTACGATG+AGG 0.679194 8_1:+10474156 None:intergenic
GACGATGTCAAGGAACGTGT+AGG 0.685563 8_1:-10474542 Msa1177960:three_prime_UTR
CCAAGCCTGTGACAGAACCA+AGG 0.695259 8_1:+10477490 None:intergenic
TCACTATCAATGGCTATGAG+CGG 0.695802 8_1:-10479937 Msa1177960:exon
GTATCGGTAACACGGTGTGG+TGG 0.710548 8_1:-10479039 Msa1177960:CDS
GGTGTATCGGTAACACGGTG+TGG 0.714817 8_1:-10479042 Msa1177960:CDS
ACTTACGTTTCTCAACCACA+AGG 0.729644 8_1:+10477386 None:intergenic
AGTACCTGATTGTAGTACGT+AGG 0.731005 8_1:+10476575 None:intergenic
ATAATAGTCCAGATTCCGTG+AGG 0.739224 8_1:+10475942 None:intergenic
ACTGGATACATACTCCAACG+AGG 0.831588 8_1:-10474752 Msa1177960:intron

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! ATAAAAATAAATTAAAAAAA+AGG + chr8_1:10474890-10474909 None:intergenic 0.0%
!!! TTTTTTTTAATTTATTTTTA+TGG - chr8_1:10474889-10474908 Msa1177960:intron 0.0%
!!! TTTAATTTTTATTTTTTTAT+AGG - chr8_1:10475919-10475938 Msa1177960:CDS 0.0%
!!! AATATTTTAAGAAGTAAAAA+AGG + chr8_1:10478483-10478502 None:intergenic 10.0%
!! TTATATTTATACTTAGAATA+AGG - chr8_1:10479884-10479903 Msa1177960:intron 10.0%
!!! TAATAAGTTTTTTATAGCAA+TGG - chr8_1:10474355-10474374 Msa1177960:three_prime_UTR 15.0%
!! ATTTGAAAAATAAAACACAT+AGG - chr8_1:10474767-10474786 Msa1177960:CDS 15.0%
!! CTATTATAAAATTATGTACT+AGG - chr8_1:10474841-10474860 Msa1177960:intron 15.0%
!!! AAGATTACTTTTACAATAAA+TGG - chr8_1:10474915-10474934 Msa1177960:intron 15.0%
!! TAATAACTTAAGTAAAACAA+AGG + chr8_1:10475807-10475826 None:intergenic 15.0%
!!! TTCAATTTTATTTTTTGGTA+TGG - chr8_1:10477584-10477603 Msa1177960:CDS 15.0%
!!! TATTTCATATATTTTCAAGT+AGG - chr8_1:10477659-10477678 Msa1177960:intron 15.0%
!! CATATAAAAAAAACTAAATG+TGG + chr8_1:10477692-10477711 None:intergenic 15.0%
!!! TTTTATATCAGAATGAATTA+AGG + chr8_1:10478657-10478676 None:intergenic 15.0%
!!! AATCTATTATTTTCTTTACA+GGG - chr8_1:10478713-10478732 Msa1177960:CDS 15.0%
!!! ATTTTAATTATTCATTTACC+AGG - chr8_1:10478810-10478829 Msa1177960:CDS 15.0%
!!! AAAACATTTTTTTCTAGTTT+AGG - chr8_1:10479423-10479442 Msa1177960:intron 15.0%
!! ATATTATCTTGTGAATAGAT+AGG - chr8_1:10474516-10474535 Msa1177960:three_prime_UTR 20.0%
!! AATAGATAGGAAAATATGAA+TGG - chr8_1:10474529-10474548 Msa1177960:three_prime_UTR 20.0%
!!! GTAGTAATTTTCTTTTTTCA+GGG + chr8_1:10474675-10474694 None:intergenic 20.0%
!!! TGTAGTAATTTTCTTTTTTC+AGG + chr8_1:10474676-10474695 None:intergenic 20.0%
!! AAAATAAAACACATAGGTTT+AGG - chr8_1:10474773-10474792 Msa1177960:CDS 20.0%
!!! TTTACAATAAATGGTCATTT+TGG - chr8_1:10474924-10474943 Msa1177960:intron 20.0%
!!! TTTGAGACATTATTTGTTAT+TGG - chr8_1:10475003-10475022 Msa1177960:intron 20.0%
!! ATGGAATAATGAAACAAATT+AGG + chr8_1:10475691-10475710 None:intergenic 20.0%
!!! TTTTTGGTATAATTAGTTGA+TGG + chr8_1:10475710-10475729 None:intergenic 20.0%
!! AAAATTAAAGCATATCAGTA+AGG + chr8_1:10475908-10475927 None:intergenic 20.0%
!! TAGTTAACTTAACTAGAAAT+TGG - chr8_1:10476079-10476098 Msa1177960:intron 20.0%
!!! AATATTTTAAGTAATACTGC+TGG - chr8_1:10476130-10476149 Msa1177960:intron 20.0%
!!! GTTATCTTGTACAATATTTT+TGG - chr8_1:10477275-10477294 Msa1177960:intron 20.0%
!!! ACCTGTTCAATTTTATTTTT+TGG - chr8_1:10477579-10477598 Msa1177960:CDS 20.0%
!! ACCAAAAAATAAAATTGAAC+AGG + chr8_1:10477583-10477602 None:intergenic 20.0%
!! CTTTAACTATTTCCTTTATT+TGG - chr8_1:10478507-10478526 Msa1177960:intron 20.0%
!! AATAATAGATTGTGTAAGAA+TGG + chr8_1:10478704-10478723 None:intergenic 20.0%
!!! CAATCTATTATTTTCTTTAC+AGG - chr8_1:10478712-10478731 Msa1177960:CDS 20.0%
!! TTAGTTATGTAACAGTTTAT+TGG + chr8_1:10478845-10478864 None:intergenic 20.0%
!! AATCATGAAACAAATAAGAA+GGG + chr8_1:10479121-10479140 None:intergenic 20.0%
!! TAATCATGAAACAAATAAGA+AGG + chr8_1:10479122-10479141 None:intergenic 20.0%
!! TATTTGTTTCATGATTAATG+AGG - chr8_1:10479125-10479144 Msa1177960:intron 20.0%
!!! ATTTTTTGATCAAAATAGCT+AGG - chr8_1:10479740-10479759 Msa1177960:intron 20.0%
! ATGATAGAAACTATCATACA+GGG + chr8_1:10474805-10474824 None:intergenic 25.0%
! TATGATAGAAACTATCATAC+AGG + chr8_1:10474806-10474825 None:intergenic 25.0%
! TAAAATTATGTACTAGGACT+AGG - chr8_1:10474847-10474866 Msa1177960:intron 25.0%
! TCAACATAACTGAAGTTTAA+AGG + chr8_1:10474961-10474980 None:intergenic 25.0%
!!! TTCTCATATTGATTCTTCTT+TGG - chr8_1:10475159-10475178 Msa1177960:intron 25.0%
!!! TCTCATATTGATTCTTCTTT+GGG - chr8_1:10475160-10475179 Msa1177960:intron 25.0%
!! GTACCATTTTCTTATGTTTA+CGG - chr8_1:10475566-10475585 Msa1177960:CDS 25.0%
! AAACCGTAAACATAAGAAAA+TGG + chr8_1:10475572-10475591 None:intergenic 25.0%
! TGAATAGTTGAATATACACA+AGG - chr8_1:10475638-10475657 Msa1177960:intron 25.0%
!!! CAAAGGTAGAATTTTGAAAA+CGG + chr8_1:10475790-10475809 None:intergenic 25.0%
! TAAGGAATATCAGTAATGTT+AGG + chr8_1:10475890-10475909 None:intergenic 25.0%
!!! TTTTCTGATTCTTTGTTTTC+AGG - chr8_1:10476523-10476542 Msa1177960:intron 25.0%
!!! TTTCTGATTCTTTGTTTTCA+GGG - chr8_1:10476524-10476543 Msa1177960:intron 25.0%
! TGAATAACATTCTTTCCAAA+TGG - chr8_1:10476564-10476583 Msa1177960:intron 25.0%
!!! CCAAATTTTTGGATTAGAAA+AGG + chr8_1:10476674-10476693 None:intergenic 25.0%
!! CCTTTTCTAATCCAAAAATT+TGG - chr8_1:10476671-10476690 Msa1177960:CDS 25.0%
! TTCTAATCCAAAAATTTGGA+TGG - chr8_1:10476675-10476694 Msa1177960:CDS 25.0%
!!! ATCTGTTTACTTTTGAACTA+GGG + chr8_1:10476947-10476966 None:intergenic 25.0%
!!! TATCTGTTTACTTTTGAACT+AGG + chr8_1:10476948-10476967 None:intergenic 25.0%
!!! ATATTTTTGGCATTTTACCA+TGG - chr8_1:10477288-10477307 Msa1177960:intron 25.0%
!! TACTTTGTAATTCCTTTTGT+TGG - chr8_1:10477330-10477349 Msa1177960:intron 25.0%
!! ACTTTGTAATTCCTTTTGTT+GGG - chr8_1:10477331-10477350 Msa1177960:intron 25.0%
! TTTGACAAAATCAATTTCCA+AGG + chr8_1:10477462-10477481 None:intergenic 25.0%
! CAACTATATATATTATCGCT+TGG - chr8_1:10477971-10477990 Msa1177960:intron 25.0%
!! GGAAGCAAATATTGATTATA+TGG - chr8_1:10478435-10478454 Msa1177960:intron 25.0%
!! AGAATGGTAACATGTTTTAT+TGG + chr8_1:10478688-10478707 None:intergenic 25.0%
!! GATGCATAGTAAAATGATTT+TGG + chr8_1:10479067-10479086 None:intergenic 25.0%
! GCATTCATATAGAAACATAA+TGG + chr8_1:10479275-10479294 None:intergenic 25.0%
! TCTGTTGTATTGTACTTAAT+TGG - chr8_1:10479503-10479522 Msa1177960:intron 25.0%
!! TTTTTACCAGAAAGAAATCT+TGG - chr8_1:10479771-10479790 Msa1177960:intron 25.0%
! TTCTGTATAGATATAGTTTG+TGG - chr8_1:10479826-10479845 Msa1177960:intron 25.0%
!! TCTGTATAGATATAGTTTGT+GGG - chr8_1:10479827-10479846 Msa1177960:intron 25.0%
! TATGCTTGAATGAAGTTATA+GGG + chr8_1:10479863-10479882 None:intergenic 25.0%
! ATATGCTTGAATGAAGTTAT+AGG + chr8_1:10479864-10479883 None:intergenic 25.0%
!!! TTTTTTTGACAAGAATGATG+AGG + chr8_1:10479940-10479959 None:intergenic 25.0%
! AATTTCATAACATGAACAAG+AGG + chr8_1:10480037-10480056 None:intergenic 25.0%
GAAGAAGAAGAAGAATAAAG+AGG + chr8_1:10474085-10474104 None:intergenic 30.0%
! TGTACTCTAGAAACTAGAAA+TGG - chr8_1:10474405-10474424 Msa1177960:three_prime_UTR 30.0%
GATAGGAAAATATGAATGGA+CGG - chr8_1:10474533-10474552 Msa1177960:three_prime_UTR 30.0%
ACTTACAGAATGCATATTCT+AGG + chr8_1:10474705-10474724 None:intergenic 30.0%
!! CAATAAATGGTCATTTTGGT+AGG - chr8_1:10474928-10474947 Msa1177960:intron 30.0%
!! AGACATTATTTGTTATTGGC+AGG - chr8_1:10475007-10475026 Msa1177960:intron 30.0%
!! GACATTATTTGTTATTGGCA+GGG - chr8_1:10475008-10475027 Msa1177960:intron 30.0%
GAATTCGTATAGATCACAAA+AGG - chr8_1:10475030-10475049 Msa1177960:intron 30.0%
! TATGAGAATGCATTGCATTT+TGG + chr8_1:10475147-10475166 None:intergenic 30.0%
! TCGGATGTTTGTATTTGTTT+TGG + chr8_1:10475196-10475215 None:intergenic 30.0%
TACAAACATCCGATAACAAA+AGG - chr8_1:10475203-10475222 Msa1177960:intron 30.0%
ACAAACATCCGATAACAAAA+GGG - chr8_1:10475204-10475223 Msa1177960:intron 30.0%
!! AAAAAGCTCCCTTTTGTTAT+CGG + chr8_1:10475215-10475234 None:intergenic 30.0%
TAAGTTTCATGTTCGTTACA+AGG - chr8_1:10475357-10475376 Msa1177960:CDS 30.0%
AGCATTTCTGCTTTGTAATA+TGG - chr8_1:10475534-10475553 Msa1177960:CDS 30.0%
ATTCATATGATTATCACTGC+AGG - chr8_1:10475602-10475621 Msa1177960:intron 30.0%
TTCATATGATTATCACTGCA+GGG - chr8_1:10475603-10475622 Msa1177960:intron 30.0%
GTTTAGTTGATCATTAATCC+TGG - chr8_1:10475662-10475681 Msa1177960:intron 30.0%
!!! GGTGAAATGGTCTATTTTTT+TGG + chr8_1:10475726-10475745 None:intergenic 30.0%
! TGAAAACGGTATTTGAAACT+TGG + chr8_1:10475776-10475795 None:intergenic 30.0%
ATGTTAGGTTAGTAAGATTG+TGG + chr8_1:10475875-10475894 None:intergenic 30.0%
TGCTAGATTAGTACACATTA+TGG + chr8_1:10476165-10476184 None:intergenic 30.0%
! CAGAATGTTTTATGTACAGT+CGG + chr8_1:10476220-10476239 None:intergenic 30.0%
AATGTAGTACAGCAATAGAA+AGG + chr8_1:10476447-10476466 None:intergenic 30.0%
GCAAAAATCACTTCAATTAC+AGG + chr8_1:10476482-10476501 None:intergenic 30.0%
! TGATTTTTGCACTTATCACT+CGG - chr8_1:10476492-10476511 Msa1177960:intron 30.0%
GAAAGAATGTTATTCATTGC+AGG + chr8_1:10476560-10476579 None:intergenic 30.0%
!!! GCTTGCGAAAATGTTTTAAT+AGG - chr8_1:10476811-10476830 Msa1177960:intron 30.0%
GATAATACACTTCATACAGT+AGG + chr8_1:10476858-10476877 None:intergenic 30.0%
!!! ATGTTTTGTGCTGATTTGTT+AGG - chr8_1:10476878-10476897 Msa1177960:intron 30.0%
!!! TGTTTTGTGCTGATTTGTTA+GGG - chr8_1:10476879-10476898 Msa1177960:intron 30.0%
TAAACAGATACGAAAAACAC+AGG - chr8_1:10476958-10476977 Msa1177960:intron 30.0%
CAACTTGTGCTTAAATACTA+CGG - chr8_1:10477091-10477110 Msa1177960:intron 30.0%
GGACATTTATTCTATTAACC+TGG - chr8_1:10477529-10477548 Msa1177960:CDS 30.0%
!! TTTGGTATGGTATTGATACA+TGG - chr8_1:10477597-10477616 Msa1177960:intron 30.0%
!! TTGGTATGGTATTGATACAT+GGG - chr8_1:10477598-10477617 Msa1177960:intron 30.0%
!!! TAGATTTTTTCTACCTGTGA+AGG - chr8_1:10477729-10477748 Msa1177960:CDS 30.0%
TCTACAAGTTTCATGAGAAT+AGG + chr8_1:10477792-10477811 None:intergenic 30.0%
! TTTTCAACTCCTTGATGTTA+AGG - chr8_1:10477905-10477924 Msa1177960:intron 30.0%
TAAGATGTACCTTAACATCA+AGG + chr8_1:10477917-10477936 None:intergenic 30.0%
TAATATCAGCAATTGTAGTG+AGG + chr8_1:10478029-10478048 None:intergenic 30.0%
TTGTCTTGATCTAACTTGAA+CGG - chr8_1:10478083-10478102 Msa1177960:intron 30.0%
!!! GAACTTTGTGTTATTTTCTC+AGG - chr8_1:10478152-10478171 Msa1177960:CDS 30.0%
ACCTCCTATATTTGCAAAAA+CGG + chr8_1:10478238-10478257 None:intergenic 30.0%
! TTTTTGCAAATATAGGAGGT+TGG - chr8_1:10478238-10478257 Msa1177960:intron 30.0%
TCAATATTTGCTTCCACATT+AGG + chr8_1:10478430-10478449 None:intergenic 30.0%
CTTCTTGCTCAAGTTAAATA+TGG - chr8_1:10478973-10478992 Msa1177960:CDS 30.0%
!! GATGTTTTAAGTGATTGACT+CGG + chr8_1:10479093-10479112 None:intergenic 30.0%
! CCAACCATTTTATAATACCA+GGG - chr8_1:10479294-10479313 Msa1177960:intron 30.0%
ATTGTACTTAATTGGCACTT+TGG - chr8_1:10479511-10479530 Msa1177960:intron 30.0%
TTTCAAAGAGGGAAAAGTAA+AGG - chr8_1:10479630-10479649 Msa1177960:intron 30.0%
GTTAATCCAAGATTTCTTTC+TGG + chr8_1:10479780-10479799 None:intergenic 30.0%
!! ACAGAAAGCATTTAGATCAT+GGG + chr8_1:10479812-10479831 None:intergenic 30.0%
!! TACAGAAAGCATTTAGATCA+TGG + chr8_1:10479813-10479832 None:intergenic 30.0%
ATGCTTGAATGAAGTTATAG+GGG + chr8_1:10479862-10479881 None:intergenic 30.0%
TTGATTTCCAACCGCAATTT+CGG - chr8_1:10474217-10474236 Msa1177960:three_prime_UTR 35.0%
CAATGAAAGAACCGAAATTG+CGG + chr8_1:10474231-10474250 None:intergenic 35.0%
TAGAAACTATCATACAGGGT+AGG + chr8_1:10474801-10474820 None:intergenic 35.0%
! TTAATTTGAAGTTCGAGCCA+TGG + chr8_1:10475261-10475280 None:intergenic 35.0%
TTGCAGAACCGAATATAGAT+AGG - chr8_1:10475395-10475414 Msa1177960:CDS 35.0%
ATGAAACAAATTAGGCTACC+AGG + chr8_1:10475683-10475702 None:intergenic 35.0%
ATCTACAACGAAAGGTGAAA+TGG + chr8_1:10475739-10475758 None:intergenic 35.0%
TAACCAACATCTACAACGAA+AGG + chr8_1:10475747-10475766 None:intergenic 35.0%
ACTTTGTCTCGAACTATATC+AGG - chr8_1:10475832-10475851 Msa1177960:intron 35.0%
AGAAAAAAGAGGACTGAATG+AGG + chr8_1:10476009-10476028 None:intergenic 35.0%
!!! TCATTCAGTCCTCTTTTTTC+TGG - chr8_1:10476008-10476027 Msa1177960:intron 35.0%
!!! CATTCAGTCCTCTTTTTTCT+GGG - chr8_1:10476009-10476028 Msa1177960:intron 35.0%
!!! ATTCAGTCCTCTTTTTTCTG+GGG - chr8_1:10476010-10476029 Msa1177960:intron 35.0%
TAGATAACCCCAGAAAAAAG+AGG + chr8_1:10476020-10476039 None:intergenic 35.0%
AGATTAGTACACATTATGGC+AGG + chr8_1:10476161-10476180 None:intergenic 35.0%
! AAACTGACCGAATGAGTTTT+GGG - chr8_1:10476254-10476273 Msa1177960:intron 35.0%
ATCTGAACCCAAAACTCATT+CGG + chr8_1:10476264-10476283 None:intergenic 35.0%
! TTCCAAATGGATTCCAGTAT+CGG - chr8_1:10476577-10476596 Msa1177960:intron 35.0%
TTCTACTCATTTGGATCACT+TGG - chr8_1:10476707-10476726 Msa1177960:CDS 35.0%
AATACTACGGTCCATTTACA+AGG - chr8_1:10477104-10477123 Msa1177960:intron 35.0%
TTCAGCTGTAACCTTGTAAA+TGG + chr8_1:10477118-10477137 None:intergenic 35.0%
CTCAATCATATTGCTCATAG+CGG + chr8_1:10477171-10477190 None:intergenic 35.0%
!!! ATTTTTTCTACCTGTGAAGG+TGG - chr8_1:10477732-10477751 Msa1177960:CDS 35.0%
!!! TTTTTTCTACCTGTGAAGGT+GGG - chr8_1:10477733-10477752 Msa1177960:CDS 35.0%
AGCAGAATTATACAGACAGT+TGG + chr8_1:10477769-10477788 None:intergenic 35.0%
!! TTTTCAAGCTGAGCTTCAAT+TGG - chr8_1:10477838-10477857 Msa1177960:CDS 35.0%
TTGACATAGTTGAGAGCAAA+TGG + chr8_1:10477940-10477959 None:intergenic 35.0%
ACAATGATCACAATCTTGTG+TGG + chr8_1:10478067-10478086 None:intergenic 35.0%
TTGATCTAACTTGAACGGTT+AGG - chr8_1:10478088-10478107 Msa1177960:intron 35.0%
TATATTTGCAAAAACGGCCA+TGG + chr8_1:10478232-10478251 None:intergenic 35.0%
!!! ATGGCCGTTTTTGCAAATAT+AGG - chr8_1:10478231-10478250 Msa1177960:intron 35.0%
TTCCATAACAACTGTTCGAA+AGG - chr8_1:10478290-10478309 Msa1177960:intron 35.0%
TATAATAGCTGTACAGCAGT+TGG + chr8_1:10478359-10478378 None:intergenic 35.0%
GATTATATGGCAATGTACAG+AGG - chr8_1:10478448-10478467 Msa1177960:intron 35.0%
TTGCATGATCTGCCAAATAA+AGG + chr8_1:10478522-10478541 None:intergenic 35.0%
GCTGTGTAAGAAAAAATGCA+GGG + chr8_1:10478562-10478581 None:intergenic 35.0%
AGCTGTGTAAGAAAAAATGC+AGG + chr8_1:10478563-10478582 None:intergenic 35.0%
TATTCCAATCACCAAGACAT+TGG - chr8_1:10478764-10478783 Msa1177960:CDS 35.0%
ATGTAACAGTTTATTGGTCC+TGG + chr8_1:10478839-10478858 None:intergenic 35.0%
TCAAGTTAAATATGGTGACC+TGG - chr8_1:10478981-10479000 Msa1177960:CDS 35.0%
!! GATTTTGGCAATTAGCATCA+GGG + chr8_1:10479052-10479071 None:intergenic 35.0%
!! TGATTTTGGCAATTAGCATC+AGG + chr8_1:10479053-10479072 None:intergenic 35.0%
! ACTGACAATCAAAGCGTTAA+TGG + chr8_1:10479175-10479194 None:intergenic 35.0%
! GCCAACCATTTTATAATACC+AGG - chr8_1:10479293-10479312 Msa1177960:intron 35.0%
CCCTGGTATTATAAAATGGT+TGG + chr8_1:10479297-10479316 None:intergenic 35.0%
CACTCCCTGGTATTATAAAA+TGG + chr8_1:10479301-10479320 None:intergenic 35.0%
!! TAAAAGCGATTTGTTGTTGC+AGG - chr8_1:10479455-10479474 Msa1177960:intron 35.0%
!! GTCTGGAATATCTTTTCAAC+CGG - chr8_1:10479533-10479552 Msa1177960:intron 35.0%
! TCAGTCAAGAATTTTCTCAC+CGG + chr8_1:10479555-10479574 None:intergenic 35.0%
AGAATGTTATGACGATGTCA+AGG - chr8_1:10479578-10479597 Msa1177960:intron 35.0%
! TCCCTCTTTGAAAATCTCTA+CGG + chr8_1:10479623-10479642 None:intergenic 35.0%
TTCCAAGTGCATGACATATT+TGG + chr8_1:10479675-10479694 None:intergenic 35.0%
TTGATGTAGATAGAAGAGAG+AGG - chr8_1:10480067-10480086 Msa1177960:five_prime_UTR 35.0%
CTGTCATCACTCACTATCAA+TGG - chr8_1:10474183-10474202 Msa1177960:three_prime_UTR 40.0%
TCACTATCAATGGCTATGAG+CGG - chr8_1:10474193-10474212 Msa1177960:three_prime_UTR 40.0%
AGAAATGAAGTGTGAACCTG+AGG + chr8_1:10474254-10474273 None:intergenic 40.0%
TCCTGAATCCTGAGTTAAGA+CGG - chr8_1:10474734-10474753 Msa1177960:intron 40.0%
!! CATTTCGGTTTCTGGTGTAT+CGG - chr8_1:10475075-10475094 Msa1177960:intron 40.0%
! TTTCTGGTGTATCGGTAACA+CGG - chr8_1:10475083-10475102 Msa1177960:intron 40.0%
TGTTAAAGGGAGCTGAAGAA+AGG + chr8_1:10475309-10475328 None:intergenic 40.0%
TCAACACCGCTACTGTTAAA+GGG + chr8_1:10475322-10475341 None:intergenic 40.0%
TTCAACACCGCTACTGTTAA+AGG + chr8_1:10475323-10475342 None:intergenic 40.0%
GGTTGCAGCCTATCTATATT+CGG + chr8_1:10475406-10475425 None:intergenic 40.0%
CAGATTTCCTTCCAGAAGAA+TGG + chr8_1:10475449-10475468 None:intergenic 40.0%
ATCTGCTTCAAACATCTCCT+TGG - chr8_1:10475464-10475483 Msa1177960:intron 40.0%
AGTACAATAACCCATCGCTT+AGG + chr8_1:10475502-10475521 None:intergenic 40.0%
TCACCTTTCGTTGTAGATGT+TGG - chr8_1:10475741-10475760 Msa1177960:intron 40.0%
CAGTTGAACTGTTGAGACAT+TGG + chr8_1:10475968-10475987 None:intergenic 40.0%
CAATGTCTCAACAGTTCAAC+TGG - chr8_1:10475966-10475985 Msa1177960:intron 40.0%
GTACAGTCGGTGAAATGAAA+AGG + chr8_1:10476207-10476226 None:intergenic 40.0%
! GAAACTGACCGAATGAGTTT+TGG - chr8_1:10476253-10476272 Msa1177960:intron 40.0%
!!! TACTGGGTTTTGGAGTTGTA+TGG - chr8_1:10476325-10476344 Msa1177960:intron 40.0%
! CTTGTTATGCGTGCCTTTAT+GGG - chr8_1:10476405-10476424 Msa1177960:intron 40.0%
GCTGTACTACATTTGTCATG+TGG - chr8_1:10476454-10476473 Msa1177960:intron 40.0%
TCACTTGCGCTAGTATATAG+TGG - chr8_1:10476611-10476630 Msa1177960:CDS 40.0%
GTATATAGTGGCATGTACCT+TGG - chr8_1:10476623-10476642 Msa1177960:CDS 40.0%
! CAGATGGCCATCCAAATTTT+TGG + chr8_1:10476685-10476704 None:intergenic 40.0%
CCAAATGAGTAGAACACAGA+TGG + chr8_1:10476701-10476720 None:intergenic 40.0%
CCATCTGTGTTCTACTCATT+TGG - chr8_1:10476698-10476717 Msa1177960:CDS 40.0%
ACTTACGTTTCTCAACCACA+AGG + chr8_1:10476747-10476766 None:intergenic 40.0%
TTACTCATGCATCCAGTCAA+GGG + chr8_1:10477251-10477270 None:intergenic 40.0%
TTTACTCATGCATCCAGTCA+AGG + chr8_1:10477252-10477271 None:intergenic 40.0%
GACTGGATGCATGAGTAAAT+AGG - chr8_1:10477253-10477272 Msa1177960:intron 40.0%
CCTCACAATTATACATGCCA+TGG + chr8_1:10477308-10477327 None:intergenic 40.0%
CCATGGCATGTATAATTGTG+AGG - chr8_1:10477305-10477324 Msa1177960:intron 40.0%
CAAAGGATGATCCAGATCTT+GGG - chr8_1:10477376-10477395 Msa1177960:intron 40.0%
AAAGGATGATCCAGATCTTG+GGG - chr8_1:10477377-10477396 Msa1177960:intron 40.0%
ATCTTGGGGATGAAGAGAAA+AGG - chr8_1:10477391-10477410 Msa1177960:intron 40.0%
GAAGAGAAAAGGCTCATACT+TGG - chr8_1:10477402-10477421 Msa1177960:CDS 40.0%
AACCTGTGACAGTTATTCCT+TGG - chr8_1:10477442-10477461 Msa1177960:CDS 40.0%
TTCCAAGGAATAACTGTCAC+AGG + chr8_1:10477447-10477466 None:intergenic 40.0%
!!! TTTTGTCAAAAGCACCTGTC+TGG - chr8_1:10477472-10477491 Msa1177960:CDS 40.0%
!! TTTGTCAAAAGCACCTGTCT+GGG - chr8_1:10477473-10477492 Msa1177960:CDS 40.0%
GAATAAATGTCCCCCAATTG+TGG + chr8_1:10477521-10477540 None:intergenic 40.0%
AGTACCTGATTGTAGTACGT+AGG + chr8_1:10477558-10477577 None:intergenic 40.0%
! TTTTTCTACCTGTGAAGGTG+GGG - chr8_1:10477734-10477753 Msa1177960:CDS 40.0%
AGCTCAGCTTGAAAACAATG+AGG + chr8_1:10477833-10477852 None:intergenic 40.0%
ATAATAGTCCAGATTCCGTG+AGG + chr8_1:10478191-10478210 None:intergenic 40.0%
GACTATTATGTGTCCTTCCA+TGG - chr8_1:10478202-10478221 Msa1177960:intron 40.0%
!!! GCCGTTTTTGCAAATATAGG+AGG - chr8_1:10478234-10478253 Msa1177960:intron 40.0%
TGCCTTTCGAACAGTTGTTA+TGG + chr8_1:10478295-10478314 None:intergenic 40.0%
AGGCAGTTAGTTGTAGTCTA+GGG + chr8_1:10478410-10478429 None:intergenic 40.0%
TAGGCAGTTAGTTGTAGTCT+AGG + chr8_1:10478411-10478430 None:intergenic 40.0%
CTACAACTAACTGCCTAATG+TGG - chr8_1:10478414-10478433 Msa1177960:intron 40.0%
! ATGCAATCGATCGGGTTTTT+GGG - chr8_1:10478536-10478555 Msa1177960:intron 40.0%
TATTCATTTACCAGGAGTCC+AGG - chr8_1:10478818-10478837 Msa1177960:CDS 40.0%
!! ATAATACCAGGGAGTGTTAC+TGG - chr8_1:10479305-10479324 Msa1177960:intron 40.0%
!! TAATACCAGGGAGTGTTACT+GGG - chr8_1:10479306-10479325 Msa1177960:intron 40.0%
ATGAAGAATTCTCACCTCGT+TGG + chr8_1:10479395-10479414 None:intergenic 40.0%
!! GATTTGTTGTTGCAGGTTCA+TGG - chr8_1:10479462-10479481 Msa1177960:intron 40.0%
ACTTAATTGGCACTTTGGTC+TGG - chr8_1:10479516-10479535 Msa1177960:intron 40.0%
! AGCCGTAGAGATTTTCAAAG+AGG - chr8_1:10479618-10479637 Msa1177960:intron 40.0%
! GCCGTAGAGATTTTCAAAGA+GGG - chr8_1:10479619-10479638 Msa1177960:intron 40.0%
CAAAGAGGGAAAAGTAAAGG+TGG - chr8_1:10479633-10479652 Msa1177960:intron 40.0%
GACCAAATATGTCATGCACT+TGG - chr8_1:10479670-10479689 Msa1177960:intron 40.0%
GTGACTCTTCTATTTCAGCA+GGG + chr8_1:10479715-10479734 None:intergenic 40.0%
AGTGACTCTTCTATTTCAGC+AGG + chr8_1:10479716-10479735 None:intergenic 40.0%
AGCATTTAGATCATGGGACA+AGG + chr8_1:10479806-10479825 None:intergenic 40.0%
TCGTACTCAGCTGAGAAAAT+AGG - chr8_1:10479979-10479998 Msa1177960:five_prime_UTR 40.0%
ACAACGACGTCGTTTCTAAG+TGG + chr8_1:10474153-10474172 None:intergenic 45.0%
GAAAGAACCGAAATTGCGGT+TGG + chr8_1:10474227-10474246 None:intergenic 45.0%
TTCGGTTCTTTCATTGCCTC+AGG - chr8_1:10474235-10474254 Msa1177960:three_prime_UTR 45.0%
ACCGTCTTAACTCAGGATTC+AGG + chr8_1:10474738-10474757 None:intergenic 45.0%
AATCCTGAGTTAAGACGGTC+TGG - chr8_1:10474739-10474758 Msa1177960:intron 45.0%
ATACCAGACCGTCTTAACTC+AGG + chr8_1:10474745-10474764 None:intergenic 45.0%
AAGGATCTGTCCCATCAAAG+AGG - chr8_1:10475049-10475068 Msa1177960:intron 45.0%
CGAAATGCCTCCTCTTTGAT+GGG + chr8_1:10475062-10475081 None:intergenic 45.0%
!! CCATCAAAGAGGAGGCATTT+CGG - chr8_1:10475060-10475079 Msa1177960:intron 45.0%
TGGCTGCATTGTCGAGATAA+TGG + chr8_1:10475241-10475260 None:intergenic 45.0%
TTATCTCGACAATGCAGCCA+TGG - chr8_1:10475241-10475260 Msa1177960:intron 45.0%
TCAGCTCCCTTTAACAGTAG+CGG - chr8_1:10475313-10475332 Msa1177960:intron 45.0%
ATAGGCTGCAACCAACTGAT+GGG - chr8_1:10475413-10475432 Msa1177960:intron 45.0%
TTCCAGAAGAATGGCTTCAC+CGG + chr8_1:10475440-10475459 None:intergenic 45.0%
TGCTTCAAACATCTCCTTGG+TGG - chr8_1:10475467-10475486 Msa1177960:intron 45.0%
AACTGGAACAGTGCAACAGT+TGG - chr8_1:10475983-10476002 Msa1177960:intron 45.0%
!!! GAGTTTTGGGTTCAGATTGC+TGG - chr8_1:10476267-10476286 Msa1177960:intron 45.0%
!!! TTTTGGGTTCAGATTGCTGG+TGG - chr8_1:10476270-10476289 Msa1177960:intron 45.0%
TTCAGATTGCTGGTGGCATA+TGG - chr8_1:10476277-10476296 Msa1177960:intron 45.0%
TCAGATTGCTGGTGGCATAT+GGG - chr8_1:10476278-10476297 Msa1177960:intron 45.0%
ATATGGGCAGACAAAGTTGG+TGG - chr8_1:10476294-10476313 Msa1177960:intron 45.0%
! TATGGGCAGACAAAGTTGGT+GGG - chr8_1:10476295-10476314 Msa1177960:intron 45.0%
!!! TGGGTTTTGGAGTTGTATGG+TGG - chr8_1:10476328-10476347 Msa1177960:intron 45.0%
ACTCCTGTTGCTGCAAAACT+TGG - chr8_1:10476369-10476388 Msa1177960:intron 45.0%
CTCCTGTTGCTGCAAAACTT+GGG - chr8_1:10476370-10476389 Msa1177960:intron 45.0%
GCACGCATAACAAGCAGATA+TGG + chr8_1:10476399-10476418 None:intergenic 45.0%
!! GCTTGTTATGCGTGCCTTTA+TGG - chr8_1:10476404-10476423 Msa1177960:intron 45.0%
ATGCGTGCCTTTATGGGAAT+TGG - chr8_1:10476411-10476430 Msa1177960:intron 45.0%
AACCTCGCCAATTCCCATAA+AGG + chr8_1:10476421-10476440 None:intergenic 45.0%
TTTATGGGAATTGGCGAGGT+TGG - chr8_1:10476420-10476439 Msa1177960:intron 45.0%
CTCCGATACTGGAATCCATT+TGG + chr8_1:10476582-10476601 None:intergenic 45.0%
!! ATGTACCTTGGTTCTGTCAC+AGG - chr8_1:10476635-10476654 Msa1177960:CDS 45.0%
TTGGATCACTTGGCAGTATC+TGG - chr8_1:10476717-10476736 Msa1177960:CDS 45.0%
GAACACACGAGGTTTGATCA+CGG - chr8_1:10476985-10477004 Msa1177960:intron 45.0%
! TCCTTTTGTTGGGATCTTCC+AGG - chr8_1:10477341-10477360 Msa1177960:intron 45.0%
CCAAGATCTGGATCATCCTT+TGG + chr8_1:10477378-10477397 None:intergenic 45.0%
CCAAAGGATGATCCAGATCT+TGG - chr8_1:10477375-10477394 Msa1177960:intron 45.0%
TTCTCTTCATCCCCAAGATC+TGG + chr8_1:10477390-10477409 None:intergenic 45.0%
GAGAAAAGGCTCATACTTGG+AGG - chr8_1:10477405-10477424 Msa1177960:CDS 45.0%
GAGACTATTAAAGCCCAGAC+AGG + chr8_1:10477489-10477508 None:intergenic 45.0%
TCTCTCACTTCTGCCACAAT+TGG - chr8_1:10477505-10477524 Msa1177960:CDS 45.0%
CTCTCACTTCTGCCACAATT+GGG - chr8_1:10477506-10477525 Msa1177960:CDS 45.0%
TCTCACTTCTGCCACAATTG+GGG - chr8_1:10477507-10477526 Msa1177960:CDS 45.0%
ATTGTAGTACGTAGGCATCC+AGG + chr8_1:10477550-10477569 None:intergenic 45.0%
GATGCCTACGTACTACAATC+AGG - chr8_1:10477551-10477570 Msa1177960:CDS 45.0%
!! GGTTCTGAAGTTCAACCTCA+CGG - chr8_1:10478173-10478192 Msa1177960:CDS 45.0%
AAGTTCAACCTCACGGAATC+TGG - chr8_1:10478180-10478199 Msa1177960:CDS 45.0%
TGTCCTTCCATGGTTAACCA+TGG - chr8_1:10478212-10478231 Msa1177960:intron 45.0%
AAAACGGCCATGGTTAACCA+TGG + chr8_1:10478222-10478241 None:intergenic 45.0%
GCTGATACACTTGTGAGCAA+AGG - chr8_1:10478264-10478283 Msa1177960:intron 45.0%
TGGCAGATCATGCAATCGAT+CGG - chr8_1:10478527-10478546 Msa1177960:intron 45.0%
! CATGCAATCGATCGGGTTTT+TGG - chr8_1:10478535-10478554 Msa1177960:intron 45.0%
ATACACAATACTGCCATGGC+GGG + chr8_1:10478602-10478621 None:intergenic 45.0%
CATACACAATACTGCCATGG+CGG + chr8_1:10478603-10478622 None:intergenic 45.0%
AGCCATACACAATACTGCCA+TGG + chr8_1:10478606-10478625 None:intergenic 45.0%
! ATTGTGTATGGCTTGCAGTC+AGG - chr8_1:10478613-10478632 Msa1177960:CDS 45.0%
TGTGACGCATTCTCACAATC+TGG - chr8_1:10478737-10478756 Msa1177960:CDS 45.0%
! TGGTCCAATGTCTTGGTGAT+TGG + chr8_1:10478771-10478790 None:intergenic 45.0%
TAGAAACTCACAGCATAGCG+TGG + chr8_1:10478791-10478810 None:intergenic 45.0%
ACTGGATACATACTCCAACG+AGG - chr8_1:10479378-10479397 Msa1177960:intron 45.0%
TTTCTCAGCTGAGTACGATG+AGG + chr8_1:10479977-10479996 None:intergenic 45.0%
CAGCTGAGAAAATAGGTTGC+AGG - chr8_1:10479986-10480005 Msa1177960:five_prime_UTR 45.0%
!!! TAACTTTTATAATTATTTAT+TGG + chr8_1:10477208-10477227 None:intergenic 5.0%
GATCTGTCCCATCAAAGAGG+AGG - chr8_1:10475052-10475071 Msa1177960:intron 50.0%
CCGAAATGCCTCCTCTTTGA+TGG + chr8_1:10475063-10475082 None:intergenic 50.0%
!! AGAGGAGGCATTTCGGTTTC+TGG - chr8_1:10475067-10475086 Msa1177960:intron 50.0%
TGTGGTGGTTGGGAAACGAA+GGG - chr8_1:10475106-10475125 Msa1177960:intron 50.0%
! ACAGTAGCGGTGTTGAACAG+AGG - chr8_1:10475326-10475345 Msa1177960:intron 50.0%
GATAGGCTGCAACCAACTGA+TGG - chr8_1:10475412-10475431 Msa1177960:intron 50.0%
GGTGAAGCCATTCTTCTGGA+AGG - chr8_1:10475439-10475458 Msa1177960:intron 50.0%
TTAGGAAACTGCTGCCACCA+AGG + chr8_1:10475484-10475503 None:intergenic 50.0%
GCAGCAGTTTCCTAAGCGAT+GGG - chr8_1:10475489-10475508 Msa1177960:intron 50.0%
CTGGGGTTATCTACTCACAC+AGG - chr8_1:10476027-10476046 Msa1177960:intron 50.0%
GGCATATGGGCAGACAAAGT+TGG - chr8_1:10476291-10476310 Msa1177960:intron 50.0%
!! AGTTGGTGGGAAGCTAGTAC+TGG - chr8_1:10476308-10476327 Msa1177960:intron 50.0%
! GTTGGTGGGAAGCTAGTACT+GGG - chr8_1:10476309-10476328 Msa1177960:intron 50.0%
!! GGGAAGCTAGTACTGGGTTT+TGG - chr8_1:10476315-10476334 Msa1177960:intron 50.0%
! AGCCCAAGTTTTGCAGCAAC+AGG + chr8_1:10476375-10476394 None:intergenic 50.0%
TGCCTTTATGGGAATTGGCG+AGG - chr8_1:10476416-10476435 Msa1177960:intron 50.0%
GATCTGCTTCTCTCCGATAC+TGG + chr8_1:10476593-10476612 None:intergenic 50.0%
!! CTTGGTTCTGTCACAGGCTT+GGG - chr8_1:10476641-10476660 Msa1177960:CDS 50.0%
! GCAGTATCTGGTTTGCCTTG+TGG - chr8_1:10476729-10476748 Msa1177960:CDS 50.0%
ACACAGGCAAAGAACACACG+AGG - chr8_1:10476974-10476993 Msa1177960:intron 50.0%
CGAGGTTTGATCACGGAGTT+CGG - chr8_1:10476992-10477011 Msa1177960:intron 50.0%
!! CTCATAGCGGATAAGTGTGC+AGG + chr8_1:10477158-10477177 None:intergenic 50.0%
CGAGTTAGTGTTCCCTTGAC+TGG - chr8_1:10477236-10477255 Msa1177960:intron 50.0%
GCCTGGAAGATCCCAACAAA+AGG + chr8_1:10477345-10477364 None:intergenic 50.0%
CTCACTTCTGCCACAATTGG+GGG - chr8_1:10477508-10477527 Msa1177960:CDS 50.0%
GGCAGATCATGCAATCGATC+GGG - chr8_1:10478528-10478547 Msa1177960:intron 50.0%
CGCCATGGCAGTATTGTGTA+TGG - chr8_1:10478601-10478620 Msa1177960:CDS 50.0%
CATAGCGTGGTCCAATGTCT+TGG + chr8_1:10478778-10478797 None:intergenic 50.0%
GTTTATTGGTCCTGGACTCC+TGG + chr8_1:10478831-10478850 None:intergenic 50.0%
GAAGCTCGCAAAAAAGGTCC+AGG + chr8_1:10479002-10479021 None:intergenic 50.0%
GGAGGTGAAGCTCGCAAAAA+AGG + chr8_1:10479008-10479027 None:intergenic 50.0%
ATAGTCCCAGTAACACTCCC+TGG + chr8_1:10479314-10479333 None:intergenic 50.0%
GACGATGTCAAGGAACGTGT+AGG - chr8_1:10479588-10479607 Msa1177960:intron 50.0%
! GGTGTATCGGTAACACGGTG+TGG - chr8_1:10475088-10475107 Msa1177960:intron 55.0%
! GTATCGGTAACACGGTGTGG+TGG - chr8_1:10475091-10475110 Msa1177960:intron 55.0%
GGTAACACGGTGTGGTGGTT+GGG - chr8_1:10475096-10475115 Msa1177960:intron 55.0%
GTGTGGTGGTTGGGAAACGA+AGG - chr8_1:10475105-10475124 Msa1177960:intron 55.0%
CTGCAACCAACTGATGGGAC+CGG - chr8_1:10475418-10475437 Msa1177960:intron 55.0%
GACCGGTGAAGCCATTCTTC+TGG - chr8_1:10475435-10475454 Msa1177960:intron 55.0%
GGCAGCAGTTTCCTAAGCGA+TGG - chr8_1:10475488-10475507 Msa1177960:intron 55.0%
CCAAGCCTGTGACAGAACCA+AGG + chr8_1:10476643-10476662 None:intergenic 55.0%
!! CCTTGGTTCTGTCACAGGCT+TGG - chr8_1:10476640-10476659 Msa1177960:CDS 55.0%
CTACGCCTCCAACTACAGAG+CGG - chr8_1:10477025-10477044 Msa1177960:intron 55.0%
TACTACCGCCGCTCTGTAGT+TGG + chr8_1:10477036-10477055 None:intergenic 55.0%
! CCTTTGGTGTGCTGTATGCC+TGG + chr8_1:10477362-10477381 None:intergenic 55.0%
CCAGGCATACAGCACACCAA+AGG - chr8_1:10477359-10477378 Msa1177960:intron 55.0%
CGGCCATGGTTAACCATGGA+AGG + chr8_1:10478218-10478237 None:intergenic 55.0%
CAATGTCAGAACACCCGCCA+TGG - chr8_1:10478586-10478605 Msa1177960:intron 55.0%
! TTTTGCGAGCTTCACCTCCG+AGG - chr8_1:10479009-10479028 Msa1177960:CDS 55.0%
CTGGGACTATCGAATACCGC+AGG - chr8_1:10479324-10479343 Msa1177960:intron 55.0%
!! AATACCGCAGGAGTGCTTGC+CGG - chr8_1:10479336-10479355 Msa1177960:intron 55.0%
CGGTAACACGGTGTGGTGGT+TGG - chr8_1:10475095-10475114 Msa1177960:intron 60.0%
GCTTCACCGGTCCCATCAGT+TGG + chr8_1:10475427-10475446 None:intergenic 60.0%
! CGCTCTGTAGTTGGAGGCGT+AGG + chr8_1:10477027-10477046 None:intergenic 60.0%
TACCGCCGCTCTGTAGTTGG+AGG + chr8_1:10477033-10477052 None:intergenic 60.0%
TGCGTATGCCCCACCTTCAC+AGG + chr8_1:10477745-10477764 None:intergenic 60.0%
! GGAGTGCTTGCCGGTGTCTT+CGG - chr8_1:10479345-10479364 Msa1177960:intron 60.0%
CGCAGCTGTACCGAAGACAC+CGG + chr8_1:10479358-10479377 None:intergenic 60.0%
GTCTTCGGTACAGCTGCGAC+TGG - chr8_1:10479360-10479379 Msa1177960:intron 60.0%
CGCCTCCAACTACAGAGCGG+CGG - chr8_1:10477028-10477047 Msa1177960:intron 65.0%
GACACCGGCAAGCACTCCTG+CGG + chr8_1:10479343-10479362 None:intergenic 65.0%
Chromosome Type Strat End Strand Name
chr8_1 gene 10474039 10480113 10474039 ID=Msa1177960;Name=Msa1177960
chr8_1 mRNA 10474039 10480113 10474039 ID=Msa1177960-mRNA-1;Parent=Msa1177960;Name=Msa1177960-mRNA-1;_AED=0.13;_eAED=0.13;_QI=163|1|1|1|1|1|11|539|588
chr8_1 exon 10474039 10474675 10474039 ID=Msa1177960-mRNA-1:exon:3633;Parent=Msa1177960-mRNA-1
chr8_1 exon 10474753 10474837 10474753 ID=Msa1177960-mRNA-1:exon:3632;Parent=Msa1177960-mRNA-1
chr8_1 exon 10475353 10475418 10475353 ID=Msa1177960-mRNA-1:exon:3631;Parent=Msa1177960-mRNA-1
chr8_1 exon 10475518 10475619 10475518 ID=Msa1177960-mRNA-1:exon:3630;Parent=Msa1177960-mRNA-1
chr8_1 exon 10475841 10475978 10475841 ID=Msa1177960-mRNA-1:exon:3629;Parent=Msa1177960-mRNA-1
chr8_1 exon 10476580 10476789 10476580 ID=Msa1177960-mRNA-1:exon:3628;Parent=Msa1177960-mRNA-1
chr8_1 exon 10477392 10477607 10477392 ID=Msa1177960-mRNA-1:exon:3627;Parent=Msa1177960-mRNA-1
chr8_1 exon 10477715 10477870 10477715 ID=Msa1177960-mRNA-1:exon:3626;Parent=Msa1177960-mRNA-1
chr8_1 exon 10478104 10478211 10478104 ID=Msa1177960-mRNA-1:exon:3625;Parent=Msa1177960-mRNA-1
chr8_1 exon 10478591 10479123 10478591 ID=Msa1177960-mRNA-1:exon:3624;Parent=Msa1177960-mRNA-1
chr8_1 exon 10479896 10480113 10479896 ID=Msa1177960-mRNA-1:exon:3623;Parent=Msa1177960-mRNA-1
chr8_1 five_prime_UTR 10479951 10480113 10479951 ID=Msa1177960-mRNA-1:five_prime_utr;Parent=Msa1177960-mRNA-1
chr8_1 CDS 10479896 10479950 10479896 ID=Msa1177960-mRNA-1:cds;Parent=Msa1177960-mRNA-1
chr8_1 CDS 10478591 10479123 10478591 ID=Msa1177960-mRNA-1:cds;Parent=Msa1177960-mRNA-1
chr8_1 CDS 10478104 10478211 10478104 ID=Msa1177960-mRNA-1:cds;Parent=Msa1177960-mRNA-1
chr8_1 CDS 10477715 10477870 10477715 ID=Msa1177960-mRNA-1:cds;Parent=Msa1177960-mRNA-1
chr8_1 CDS 10477392 10477607 10477392 ID=Msa1177960-mRNA-1:cds;Parent=Msa1177960-mRNA-1
chr8_1 CDS 10476580 10476789 10476580 ID=Msa1177960-mRNA-1:cds;Parent=Msa1177960-mRNA-1
chr8_1 CDS 10475841 10475978 10475841 ID=Msa1177960-mRNA-1:cds;Parent=Msa1177960-mRNA-1
chr8_1 CDS 10475518 10475619 10475518 ID=Msa1177960-mRNA-1:cds;Parent=Msa1177960-mRNA-1
chr8_1 CDS 10475353 10475418 10475353 ID=Msa1177960-mRNA-1:cds;Parent=Msa1177960-mRNA-1
chr8_1 CDS 10474753 10474837 10474753 ID=Msa1177960-mRNA-1:cds;Parent=Msa1177960-mRNA-1
chr8_1 CDS 10474578 10474675 10474578 ID=Msa1177960-mRNA-1:cds;Parent=Msa1177960-mRNA-1
chr8_1 three_prime_UTR 10474039 10474577 10474039 ID=Msa1177960-mRNA-1:three_prime_utr;Parent=Msa1177960-mRNA-1
Gene Sequence

>Msa1177960

ATGGCTATGAGCGGTTTGATTTCCAACCGCAATTTCGGTTCTTTCATTGCCTCAGGGAATTCGTATAGATCACAAAAGGATCTGTCCCATCAAAGAGGAGGCATTTCGGTTTCTGGTGTATCGGTAACACGGTGTGGTGGTTGGGAAACGAAGGGTTCTCTTTCAAGATGCCAAAATGCAATGCATTCTCATATTGATTCTTCTTTGGGAGAGAGAGTACCAAAACAAATACAAACATCCGATAACAAAAGGGAGCTTTTTTCTCCATTATCTCGACAATGCAGCCATGGCTCGAACTTCAAATTAAATGCTTGCAAAAGAAGTCATTGTTACCTTTCTTCAGCTCCCTTTAACAGTAGCGGTGTTGAACAGAGGAAAGCAAATAAGTTTCATGTTCGTTACAAGGCTGAAGAGTACGAATTTGCAGAACCGAATATAGATAGGCTGCAACCAACTGATGGGACCGGTGAAGCCATTCTTCTGGAAGGAAATCTGCTTCAAACATCTCCTTGGTGGCAGCAGTTTCCTAAGCGATGGGTTATTGTACTGCTATGTTTTACAGCATTTCTGCTTTGTAATATGGATCGTGTAAACATGAGCATAGCAATACTTCCAATGTCTCAACAGTTCAACTGGAACAGTGCAACAGTTGGCCTCATTCAGTCCTCTTTTTTCTGGGGTTATCTACTCACACAGATTGCTGGTGGCATATGGGCAGACAAAGTTGGTGGGAAGCTAGTACTGGGTTTTGGAGTTGTATGGTGGTCAATTGCAACAGTTTTAACTCCTGTTGCTGCAAAACTTGGGCTACCATATCTGCTTGTTATGCGTGCCTTTATGGGAATTGGCGAGGGTGTTGCTATGCCTGCAATGAATAACATTCTTTCCAAATGGATTCCAGTATCGGAGAGAAGCAGATCACTTGCGCTAGTATATAGTGGCATGTACCTTGGTTCTGTCACAGGCTTGGGATTCTCGCCTTTTCTAATCCAAAAATTTGGATGGCCATCTGTGTTCTACTCATTTGGATCACTTGGCAGTATCTGGTTTGCCTTGTGGTTGAGAAACGCATACAGCACACCAAAGGATGATCCAGATCTTGGGGATGAAGAGAAAAGGCTCATACTTGGAGGCAACATATCAAAAGAACCTGTGACAGTTATTCCTTGGAAATTGATTTTGTCAAAAGCACCTGTCTGGGCTTTAATAGTCTCTCACTTCTGCCACAATTGGGGGACATTTATTCTATTAACCTGGATGCCTACGTACTACAATCAGGTTCTGAAGTTCAACCTCACGGAATCTGGACTATTATGTGTCCTTCCATGGTTAACCATGGCCGTTTTTGCAAATATAGGAGGTTGGATAGCTGATACACTTGTGAGCAAAGGTTTTTCCATAACAACTGTTCGAAAGATCATGCAATCGATCGGGTTTTTGGGCCCTGCATTTTTTCTTACACAGCTAAGCAATGTCAGAACACCCGCCATGGCAGTATTGTGTATGGCTTGCAGTCAGGGATGTGACGCATTCTCACAATCTGGTCTATATTCCAATCACCAAGACATTGGACCACGCTATGCTGGAGTGTTACTGGGACTATCGAATACCGCAGGAGTGCTTGCCGGTGTCTTCGGTACAGCTGCGACTGGATACATACTCCAACGAGGTTCATGGAATGATGTATTTAAAGTCTCTGTTGTATTGTACTTAATTGGCACTTTGGTCTGGAATATCTTTTCAACCGGTGAGAAAATTCTTGACTGA

Protein sequence

>Msa1177960

MAMSGLISNRNFGSFIASGNSYRSQKDLSHQRGGISVSGVSVTRCGGWETKGSLSRCQNAMHSHIDSSLGERVPKQIQTSDNKRELFSPLSRQCSHGSNFKLNACKRSHCYLSSAPFNSSGVEQRKANKFHVRYKAEEYEFAEPNIDRLQPTDGTGEAILLEGNLLQTSPWWQQFPKRWVIVLLCFTAFLLCNMDRVNMSIAILPMSQQFNWNSATVGLIQSSFFWGYLLTQIAGGIWADKVGGKLVLGFGVVWWSIATVLTPVAAKLGLPYLLVMRAFMGIGEGVAMPAMNNILSKWIPVSERSRSLALVYSGMYLGSVTGLGFSPFLIQKFGWPSVFYSFGSLGSIWFALWLRNAYSTPKDDPDLGDEEKRLILGGNISKEPVTVIPWKLILSKAPVWALIVSHFCHNWGTFILLTWMPTYYNQVLKFNLTESGLLCVLPWLTMAVFANIGGWIADTLVSKGFSITTVRKIMQSIGFLGPAFFLTQLSNVRTPAMAVLCMACSQGCDAFSQSGLYSNHQDIGPRYAGVLLGLSNTAGVLAGVFGTAATGYILQRGSWNDVFKVSVVLYLIGTLVWNIFSTGEKILD*