AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1040390

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1040390 MtrunA17_Chr7g0271121 89.110 753 27 4 1 753 53 750 0.0 1325
Msa1040390 MtrunA17_Chr1g0193491 68.463 501 133 8 16 501 17 507 0.0 652
Msa1040390 MtrunA17_Chr5g0442191 62.690 394 141 3 85 477 59 447 2.06e-168 498
Msa1040390 MtrunA17_Chr3g0095031 59.813 428 162 4 60 486 47 465 6.50e-167 493
Msa1040390 MtrunA17_Chr6g0475251 40.631 539 297 12 110 636 104 631 1.21e-110 351
Msa1040390 MtrunA17_Chr1g0204391 38.577 534 288 11 110 617 45 564 3.58e-108 342
Msa1040390 MtrunA17_Chr3g0121351 38.571 420 231 11 71 470 108 520 4.55e-75 255
Msa1040390 MtrunA17_Chr2g0330401 38.547 358 213 4 115 469 102 455 9.67e-75 251
Msa1040390 MtrunA17_Chr1g0176041 37.709 419 224 12 77 469 120 527 1.07e-73 251
Msa1040390 MtrunA17_Chr6g0449911 38.439 346 207 3 115 458 171 512 2.39e-71 247
Msa1040390 MtrunA17_Chr4g0063551 41.737 357 184 8 133 469 164 516 3.39e-71 246
Msa1040390 MtrunA17_Chr2g0293631 38.329 347 208 2 115 459 502 844 3.03e-70 250
Msa1040390 MtrunA17_Chr3g0107851 40.294 340 182 6 134 459 142 474 1.99e-66 230
Msa1040390 MtrunA17_Chr5g0409981 39.031 351 205 6 115 459 110 457 7.94e-66 228
Msa1040390 MtrunA17_Chr4g0076491 37.766 376 189 8 115 459 293 654 1.37e-65 231
Msa1040390 MtrunA17_Chr6g0449741 37.534 373 192 7 115 459 255 614 1.78e-65 230
Msa1040390 MtrunA17_Chr2g0299681 36.500 400 231 9 84 471 8 396 3.52e-64 220
Msa1040390 MtrunA17_Chr8g0342861 38.012 342 197 7 134 471 66 396 8.52e-63 216
Msa1040390 MtrunA17_Chr2g0329931 36.939 379 216 8 101 471 33 396 2.43e-62 215
Msa1040390 MtrunA17_Chr4g0070981 35.661 401 233 10 84 471 8 396 2.75e-62 214
Msa1040390 MtrunA17_Chr7g0236841 35.580 371 222 6 113 477 14 373 3.50e-62 215
Msa1040390 MtrunA17_Chr1g0200181 35.440 364 218 5 113 465 149 506 3.96e-62 219
Msa1040390 MtrunA17_Chr6g0483491 35.772 369 224 6 113 477 14 373 4.12e-62 215
Msa1040390 MtrunA17_Chr7g0270131 37.960 353 207 6 118 464 241 587 6.99e-62 222
Msa1040390 MtrunA17_Chr1g0157691 34.890 364 220 5 113 465 151 508 1.43e-60 215
Msa1040390 MtrunA17_Chr2g0277821 34.651 430 264 8 115 537 510 929 6.78e-60 219
Msa1040390 MtrunA17_Chr2g0297261 36.443 343 201 8 134 471 59 389 4.77e-59 206
Msa1040390 MtrunA17_Chr3g0098121 34.404 436 262 10 86 508 131 555 6.61e-59 213
Msa1040390 MtrunA17_Chr2g0300291 35.990 389 233 8 97 478 131 510 6.08e-58 210
Msa1040390 MtrunA17_Chr7g0247191 33.880 366 221 8 115 474 156 506 2.73e-55 198
Msa1040390 MtrunA17_Chr7g0247181 33.607 366 222 8 115 474 146 496 2.82e-55 198
Msa1040390 MtrunA17_Chr7g0247221 33.607 366 222 8 115 474 149 499 3.16e-55 198
Msa1040390 MtrunA17_Chr4g0040761 35.127 353 216 6 113 460 23 367 2.08e-54 201
Msa1040390 MtrunA17_Chr4g0058591 36.422 313 182 5 114 418 207 510 2.62e-52 190
Msa1040390 MtrunA17_Chr2g0310581 33.163 392 238 8 97 480 47 422 2.58e-51 187
Msa1040390 MtrunA17_Chr4g0003441 32.759 348 216 6 115 455 114 450 4.51e-51 186
Msa1040390 MtrunA17_Chr3g0114081 32.243 428 256 12 93 493 2 422 9.56e-51 187
Msa1040390 MtrunA17_Chr8g0386451 30.675 489 318 11 69 542 253 735 1.84e-50 189
Msa1040390 MtrunA17_Chr7g0236831 31.954 435 215 12 102 459 150 580 8.68e-50 187
Msa1040390 MtrunA17_Chr8g0347161 29.810 473 289 12 106 552 104 559 2.26e-49 183
Msa1040390 MtrunA17_Chr1g0149251 32.919 322 198 6 147 461 2 312 8.29e-49 175
Msa1040390 MtrunA17_Chr8g0347171 30.149 471 292 12 106 553 162 618 8.54e-48 179
Msa1040390 MtrunA17_Chr4g0062301 31.166 446 266 17 122 542 110 539 1.25e-47 178
Msa1040390 MtrunA17_Chr6g0461751 30.467 407 242 10 103 496 134 512 7.91e-47 175
Msa1040390 MtrunA17_Chr2g0307471 31.335 367 242 5 110 470 92 454 1.43e-46 174
Msa1040390 MtrunA17_Chr8g0347151 32.603 365 229 7 106 458 203 562 2.14e-45 173
Msa1040390 MtrunA17_Chr7g0263771 31.746 378 239 9 106 476 131 496 1.63e-44 169
Msa1040390 MtrunA17_Chr4g0034411 31.754 422 240 13 67 470 47 438 1.10e-43 169
Msa1040390 MtrunA17_Chr1g0192021 29.833 419 241 10 103 474 21 433 4.03e-43 165
Msa1040390 MtrunA17_Chr5g0443991 33.711 353 188 11 134 462 101 431 3.17e-42 164
Msa1040390 MtrunA17_Chr6g0466611 31.768 362 230 8 113 459 146 505 1.01e-41 162
Msa1040390 MtrunA17_Chr4g0029191 29.186 442 225 13 110 471 45 478 1.61e-39 155
Msa1040390 MtrunA17_Chr2g0309551 28.537 417 242 8 111 473 111 525 2.13e-39 154
Msa1040390 MtrunA17_Chr2g0301281 28.798 441 228 12 110 471 42 475 7.66e-39 153
Msa1040390 MtrunA17_Chr1g0179761 29.759 373 218 13 146 487 120 479 7.51e-36 142
Msa1040390 MtrunA17_Chr5g0429221 30.848 389 239 13 113 489 7 377 1.01e-35 140
Msa1040390 MtrunA17_Chr5g0434301 30.303 429 213 16 115 469 35 451 5.90e-35 139
Msa1040390 MtrunA17_Chr1g0169331 30.685 365 193 13 134 455 16 363 6.40e-35 137
Msa1040390 MtrunA17_Chr4g0004301 30.070 429 214 16 115 469 35 451 7.87e-35 139
Msa1040390 MtrunA17_Chr3g0145781 28.831 385 239 13 119 472 142 522 8.82e-33 134
Msa1040390 MtrunA17_Chr8g0342851 28.235 340 201 9 137 471 1 302 3.05e-29 119
Msa1040390 MtrunA17_Chr4g0039471 37.198 207 117 4 107 308 221 419 7.65e-27 114
Msa1040390 MtrunA17_Chr4g0062321 32.917 240 142 8 193 423 4 233 3.81e-25 105
Msa1040390 MtrunA17_Chr1g0155201 29.779 272 168 9 225 492 4 256 7.82e-23 100
Msa1040390 MtrunA17_Chr3g0137891 34.857 175 97 5 147 314 2 166 4.82e-22 95.9
Msa1040390 MtrunA17_Chr8g0354761 25.459 381 232 14 114 466 11 367 1.46e-19 92.4
Msa1040390 MtrunA17_Chr4g0025141 30.233 215 132 6 289 487 15 227 2.38e-19 88.2
Msa1040390 MtrunA17_Chr8g0349951 34.868 152 89 3 113 261 14 158 1.63e-18 83.2
Msa1040390 MtrunA17_Chr3g0137901 31.757 148 100 1 315 461 1 148 1.67e-18 84.0
Msa1040390 MtrunA17_Chr4g0074521 26.648 364 226 9 115 447 88 441 7.49e-18 87.4
Msa1040390 MtrunA17_Chr3g0108851 24.786 351 223 12 127 461 13 338 2.26e-15 80.5
Msa1040390 MtrunA17_Chr1g0155691 33.333 102 65 2 388 489 37 135 9.91e-13 68.2
Msa1040390 MtrunA17_Chr8g0364251 37.607 117 69 3 357 471 437 551 7.22e-12 68.9
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1040390 AT5G26742.1 72.879 660 161 6 1 653 1 649 0.0 918
Msa1040390 AT5G26742.2 72.879 660 161 6 1 653 1 649 0.0 918
Msa1040390 AT5G26742.3 81.418 522 91 2 136 653 37 556 0.0 848
Msa1040390 AT3G22330.1 62.597 385 142 1 102 486 98 480 2.11e-165 491
Msa1040390 AT3G22310.2 61.214 379 145 1 108 486 116 492 9.80e-163 484
Msa1040390 AT3G22310.1 61.214 379 145 1 108 486 116 492 1.59e-162 484
Msa1040390 AT5G62190.1 40.625 544 299 13 110 640 98 630 1.33e-111 354
Msa1040390 AT3G01540.4 36.524 397 236 3 64 458 124 506 2.80e-74 253
Msa1040390 AT3G01540.2 36.524 397 236 3 64 458 124 506 2.80e-74 253
Msa1040390 AT3G01540.3 36.524 397 236 3 64 458 124 506 2.80e-74 253
Msa1040390 AT3G01540.1 36.524 397 236 3 64 458 124 506 3.54e-74 253
Msa1040390 AT5G14610.6 36.750 400 235 5 62 458 125 509 5.75e-74 253
Msa1040390 AT5G14610.2 40.058 347 200 4 115 458 168 509 6.44e-74 253
Msa1040390 AT1G55150.1 38.719 359 211 5 115 469 106 459 7.88e-74 249
Msa1040390 AT5G14610.5 36.750 400 235 5 62 458 133 517 8.51e-74 253
Msa1040390 AT1G55150.2 38.719 359 211 5 115 469 131 484 3.06e-73 248
Msa1040390 AT5G14610.7 41.033 329 186 4 133 458 55 378 6.96e-72 244
Msa1040390 AT5G14610.3 41.033 329 186 4 133 458 55 378 6.96e-72 244
Msa1040390 AT5G63120.2 37.741 363 211 5 114 469 171 525 1.79e-71 245
Msa1040390 AT5G14610.1 40.597 335 191 4 127 458 248 577 4.66e-71 247
Msa1040390 AT1G31970.1 41.926 353 195 7 114 459 122 471 6.63e-71 242
Msa1040390 AT2G42520.2 38.228 395 221 10 94 469 143 533 2.08e-70 243
Msa1040390 AT2G42520.1 38.228 395 221 10 94 469 143 533 2.08e-70 243
Msa1040390 AT2G42520.3 38.228 395 221 10 94 469 143 533 2.08e-70 243
Msa1040390 AT3G06480.1 36.524 397 230 4 102 496 429 805 1.01e-69 249
Msa1040390 AT3G58510.1 38.213 403 225 11 84 469 128 523 2.03e-69 240
Msa1040390 AT3G58510.3 38.213 403 225 11 84 469 128 523 2.03e-69 240
Msa1040390 AT3G58510.2 38.213 403 225 11 84 469 128 523 2.03e-69 240
Msa1040390 AT3G58570.1 37.215 395 225 9 94 469 130 520 1.08e-67 236
Msa1040390 AT2G33730.1 37.867 375 190 8 115 459 320 681 3.10e-65 231
Msa1040390 AT1G72730.1 35.917 387 230 9 89 471 25 397 8.24e-64 219
Msa1040390 AT5G51280.1 35.714 364 217 5 113 465 151 508 2.53e-63 223
Msa1040390 AT1G20920.2 36.467 351 212 6 115 459 198 543 4.16e-62 224
Msa1040390 AT3G13920.2 36.483 381 223 9 90 466 25 390 6.45e-62 214
Msa1040390 AT3G13920.1 36.010 386 228 9 90 471 25 395 6.68e-62 214
Msa1040390 AT3G13920.5 36.483 381 223 9 90 466 29 394 7.76e-62 214
Msa1040390 AT3G13920.3 36.010 386 228 9 90 471 15 385 9.98e-62 213
Msa1040390 AT3G13920.4 37.429 350 204 8 126 471 52 390 1.35e-61 213
Msa1040390 AT1G20920.4 36.648 352 210 7 115 459 536 881 1.61e-61 225
Msa1040390 AT1G20920.6 36.648 352 210 7 115 459 536 881 1.61e-61 225
Msa1040390 AT1G20920.3 36.648 352 210 7 115 459 536 881 1.61e-61 225
Msa1040390 AT1G20920.7 36.648 352 210 7 115 459 536 881 1.61e-61 225
Msa1040390 AT1G20920.5 36.648 352 210 7 115 459 536 881 1.61e-61 225
Msa1040390 AT1G20920.1 36.648 352 210 7 115 459 536 881 1.61e-61 225
Msa1040390 AT5G14610.4 39.103 312 182 4 115 423 176 482 1.70e-61 215
Msa1040390 AT2G47330.1 39.106 358 198 8 117 464 237 584 2.79e-61 221
Msa1040390 AT4G33370.1 36.011 361 214 5 113 462 102 456 5.52e-61 215
Msa1040390 AT1G16280.1 35.751 386 230 7 113 490 63 438 8.73e-61 213
Msa1040390 AT1G54270.2 37.143 350 205 8 126 471 52 390 9.06e-61 211
Msa1040390 AT1G54270.1 35.623 393 232 10 83 471 20 395 9.22e-61 211
Msa1040390 AT3G19760.1 36.443 343 201 8 134 471 61 391 2.27e-59 207
Msa1040390 AT1G51380.1 35.561 374 216 11 113 477 27 384 2.79e-59 206
Msa1040390 AT1G28180.1 37.805 328 181 6 143 459 8 323 7.74e-59 204
Msa1040390 AT4G16630.1 36.436 376 220 8 112 478 171 536 1.89e-58 213
Msa1040390 AT3G06480.2 35.976 328 204 2 102 427 429 752 3.53e-58 212
Msa1040390 AT5G60990.1 35.101 396 240 8 111 496 12 400 5.62e-58 204
Msa1040390 AT4G00660.1 34.426 366 219 8 115 474 138 488 7.92e-58 205
Msa1040390 AT4G00660.2 34.426 366 219 8 115 474 138 488 7.92e-58 205
Msa1040390 AT1G77030.1 36.080 352 212 6 113 459 33 376 5.84e-57 209
Msa1040390 AT5G63120.3 37.421 318 184 5 114 424 171 480 1.52e-56 201
Msa1040390 AT5G63120.4 37.421 318 184 5 114 424 171 480 1.52e-56 201
Msa1040390 AT5G63120.5 37.421 318 184 5 114 424 171 480 1.52e-56 201
Msa1040390 AT5G63120.1 37.500 312 180 5 114 418 171 474 3.90e-56 200
Msa1040390 AT3G09620.1 35.714 350 187 6 115 459 403 719 1.48e-55 206
Msa1040390 AT3G09620.2 35.714 350 187 6 115 459 404 720 1.78e-55 206
Msa1040390 AT2G45810.1 31.542 428 260 9 77 487 111 522 2.61e-55 199
Msa1040390 AT3G61240.2 32.603 365 227 6 115 474 131 481 1.63e-54 196
Msa1040390 AT3G61240.1 32.603 365 227 6 115 474 131 481 1.63e-54 196
Msa1040390 AT3G18600.1 35.230 369 217 10 113 470 94 451 9.29e-54 196
Msa1040390 AT5G65900.1 34.060 367 225 6 113 470 159 517 4.59e-52 192
Msa1040390 AT5G05450.1 31.967 366 221 8 115 458 23 382 4.69e-50 186
Msa1040390 AT1G71370.1 31.921 354 228 6 115 458 23 373 9.80e-50 184
Msa1040390 AT1G63250.1 29.451 455 295 10 106 542 331 777 1.05e-49 187
Msa1040390 AT5G63630.1 29.857 489 314 11 86 552 31 512 2.22e-49 182
Msa1040390 AT5G63630.2 29.857 489 314 11 86 552 225 706 3.00e-49 185
Msa1040390 AT5G11170.1 32.184 348 218 6 115 455 53 389 8.37e-49 178
Msa1040390 AT5G11200.1 32.184 348 218 6 115 455 53 389 8.37e-49 178
Msa1040390 AT2G07750.1 29.451 455 295 10 106 542 378 824 1.76e-48 184
Msa1040390 AT5G08610.1 33.060 366 226 8 106 458 385 744 1.01e-47 182
Msa1040390 AT1G12770.2 28.837 430 248 10 112 485 114 541 1.52e-46 175
Msa1040390 AT1G12770.1 28.837 430 248 10 112 485 114 541 1.52e-46 175
Msa1040390 AT5G11170.2 33.228 316 193 6 147 455 2 306 1.99e-46 169
Msa1040390 AT3G02065.3 31.492 362 238 6 108 463 110 467 1.18e-45 171
Msa1040390 AT3G02065.2 31.492 362 238 6 108 463 110 467 1.18e-45 171
Msa1040390 AT5G08620.1 33.333 369 221 10 106 458 83 442 1.42e-45 172
Msa1040390 AT3G02065.1 32.012 328 213 6 142 463 7 330 4.35e-43 160
Msa1040390 AT3G16840.2 32.234 394 195 10 134 458 217 607 7.03e-43 167
Msa1040390 AT3G16840.1 32.234 394 195 10 134 458 216 606 7.52e-43 167
Msa1040390 AT5G11200.3 29.639 388 216 7 115 455 53 430 1.34e-42 162
Msa1040390 AT3G09720.2 30.946 349 218 9 119 459 152 485 5.97e-42 161
Msa1040390 AT3G09720.1 30.946 349 218 9 119 459 152 485 5.97e-42 161
Msa1040390 AT4G15850.1 28.942 463 242 15 88 474 7 458 1.30e-39 154
Msa1040390 AT4G09730.1 30.027 373 216 10 109 452 113 469 1.47e-39 155
Msa1040390 AT2G40700.1 26.347 501 270 13 110 518 32 525 1.03e-38 153
Msa1040390 AT4G34910.1 30.469 384 217 8 112 448 50 430 1.46e-38 152
Msa1040390 AT5G54910.1 28.571 476 289 15 123 568 86 540 7.66e-38 151
Msa1040390 AT3G53110.1 29.971 347 210 10 146 471 132 466 4.40e-34 137
Msa1040390 AT1G71280.2 29.245 318 190 7 112 422 21 310 1.95e-32 129
Msa1040390 AT3G06980.1 26.884 398 251 12 119 479 385 779 7.20e-32 133
Msa1040390 AT1G71280.1 29.154 319 191 7 115 426 24 314 2.30e-31 129
Msa1040390 AT1G51380.2 36.145 249 137 9 125 366 39 272 3.87e-31 124
Msa1040390 AT1G51380.4 34.400 250 141 7 125 361 39 278 2.91e-29 119
Msa1040390 AT1G51380.3 33.704 270 151 8 125 381 39 293 4.57e-29 118
Msa1040390 AT5G11200.2 32.524 206 122 5 115 313 53 248 1.56e-22 102
Msa1040390 AT1G28180.2 38.889 126 61 3 137 253 2 120 5.97e-17 78.2
Msa1040390 AT1G59990.2 26.357 258 142 10 81 316 56 287 3.65e-11 67.0
Msa1040390 AT1G59990.2 33.898 118 76 2 357 473 426 542 4.27e-11 66.6
Msa1040390 AT1G59990.1 26.357 258 142 10 81 316 56 287 4.07e-11 67.0
Msa1040390 AT1G59990.1 33.898 118 76 2 357 473 426 542 4.18e-11 67.0

Find 217 sgRNAs with CRISPR-Local

Find 464 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CTCAAAACTGTTTGTATTTA+TGG -0.007942 7_1:+77744457 Msa1040390:CDS
TATCAGTTCTGTAATTATTT+TGG 0.070033 7_1:-77748856 None:intergenic
TCATCCCGACTGCTTCTTTC+TGG 0.114860 7_1:-77748460 None:intergenic
GTCACTGCTGTTGGCCTATT+GGG 0.156541 7_1:+77748809 Msa1040390:three_prime_UTR
CTCAGTGACGAAGCATTTAA+AGG 0.182063 7_1:+77743256 Msa1040390:CDS
CAAGTTGTTGTCACGCTTAA+TGG 0.188044 7_1:+77746664 Msa1040390:CDS
CCCTCCCATCAATTTACTTT+TGG 0.198426 7_1:+77748756 Msa1040390:CDS
GTTGAGTGAAGTTGAGTATT+TGG 0.208375 7_1:+77744585 Msa1040390:CDS
TTTGGAATTCCTATCATTAA+TGG 0.210788 7_1:+77743612 Msa1040390:CDS
AGAGGATGTAGAAGTCATTT+TGG 0.244036 7_1:+77744648 Msa1040390:CDS
GATGCATCTTTGAACTTTCC+TGG 0.265051 7_1:-77748833 None:intergenic
GGTCACTGCTGTTGGCCTAT+TGG 0.278011 7_1:+77748808 Msa1040390:three_prime_UTR
CAATCCATTGACAATTGATT+TGG 0.291904 7_1:+77744756 Msa1040390:CDS
AGTCGGGATGATTGGTTAAT+TGG 0.293982 7_1:+77748472 Msa1040390:CDS
CGAGGCTCTGATGATGATTT+TGG 0.294830 7_1:+77748382 Msa1040390:CDS
TTAGACGATGGTCAAGATTC+AGG 0.302157 7_1:+77743636 Msa1040390:CDS
TGATATTCCCAATGTTGATT+TGG 0.302902 7_1:+77745797 Msa1040390:CDS
CCGACTGCTTCTTTCTGGTT+TGG 0.308168 7_1:-77748455 None:intergenic
GGAAGCACCGATTGCGGTTA+TGG 0.308638 7_1:-77743041 None:intergenic
AGTGAAGAAGATGAAGAATT+AGG 0.312031 7_1:-77743232 None:intergenic
CAGAAACTGATTGAAGAAAA+AGG 0.312277 7_1:+77746727 Msa1040390:CDS
CAATCAGTTTCTGTGCAGTT+GGG 0.324860 7_1:-77746717 None:intergenic
TCCAACTTCGTCAGCAGCTT+TGG 0.325790 7_1:-77747813 None:intergenic
TCTCCCAACCTCCGTCTTCC+CGG 0.331372 7_1:+77746791 Msa1040390:CDS
GGTTATGGAAGCCATTTATA+TGG 0.333697 7_1:-77743026 None:intergenic
AGAACGAAGAACCATATAAA+TGG 0.336574 7_1:+77743015 Msa1040390:exon
CATTCAATGTTCTTTCTCTC+TGG 0.338089 7_1:-77745716 None:intergenic
GCCTAGTTGGGTGAAGAAAT+TGG 0.339400 7_1:+77744717 Msa1040390:CDS
GTACATTGCAGAAGCTTTGC+AGG 0.346267 7_1:+77748660 Msa1040390:intron
ACAGGGAAAACACTGGCTTT+TGG 0.347418 7_1:+77743594 Msa1040390:CDS
CCAATTTCAACTCCTCTGAT+AGG 0.348149 7_1:+77743185 Msa1040390:CDS
AAAGAGATACTAAAGGATAA+GGG 0.348693 7_1:-77742948 None:intergenic
TTCTGCAACCATGCCTAGTT+GGG 0.354293 7_1:+77744705 Msa1040390:CDS
GGGCCTCCAAGTGATTTCTA+TGG 0.355665 7_1:+77748271 Msa1040390:CDS
CGTGGTGTTGATGTGGTTGT+TGG 0.359176 7_1:+77744517 Msa1040390:CDS
AGCATGCTCTGTCTCTTTGC+TGG 0.369163 7_1:-77744679 None:intergenic
CTGATCAGATGCTTGCTGTT+GGG 0.371660 7_1:+77744620 Msa1040390:CDS
TTTCTGCAACCATGCCTAGT+TGG 0.372049 7_1:+77744704 Msa1040390:CDS
CCTATCAGAGGAGTTGAAAT+TGG 0.372713 7_1:-77743185 None:intergenic
GTAACCGAAGAGGAGGTTCT+AGG 0.375092 7_1:+77748317 Msa1040390:CDS
AAAAGAGATACTAAAGGATA+AGG 0.375120 7_1:-77742949 None:intergenic
GCTCGTGCAAAGACTGGAAC+AGG 0.376450 7_1:+77743576 Msa1040390:CDS
TACAAAAGTCTCGGGATCAT+TGG 0.383492 7_1:-77746476 None:intergenic
GATAAAACTATATGCTATAT+CGG 0.384254 7_1:+77745099 Msa1040390:CDS
TCAATCAGTTTCTGTGCAGT+TGG 0.394092 7_1:-77746718 None:intergenic
TGGATTGTTCAAGTATTTCC+TGG 0.396807 7_1:-77744740 None:intergenic
TGAACTTTCCTGGCCCCAAT+AGG 0.403554 7_1:-77748823 None:intergenic
GTGACCTCAGCTCACTTCAT+TGG 0.404563 7_1:-77748791 None:intergenic
GTCTCTTATCACCCATGAAC+AGG 0.413164 7_1:+77746813 Msa1040390:CDS
AACTGCCCTTGCAGCTGCAC+TGG 0.414599 7_1:+77746753 Msa1040390:CDS
GTACATCGCTCTGGCCGTAC+TGG 0.423237 7_1:+77746496 Msa1040390:CDS
AAGCTTCCAATACCTGTTCA+TGG 0.425559 7_1:-77746825 None:intergenic
TCGTCTAAACCATTAATGAT+AGG 0.426672 7_1:-77743621 None:intergenic
GCCGTCTGTGGAAGATGTTT+TGG 0.429631 7_1:+77746627 Msa1040390:CDS
GATCATTGGGAAGTTCATAA+TGG 0.431502 7_1:-77746462 None:intergenic
GTAATTTACCTTGGTGACTT+TGG 0.436379 7_1:-77748074 None:intergenic
AAAGAAGCAGTCGGGATGAT+TGG 0.437118 7_1:+77748464 Msa1040390:CDS
TAGGCGTCTTCCTAGAGCTT+TGG 0.437635 7_1:+77744369 Msa1040390:intron
TTTAACGGAGGAAGTGGAAA+TGG 0.437988 7_1:-77743116 None:intergenic
TTTGGGGAAGGAAGAAGGGG+AGG 0.439094 7_1:+77749012 Msa1040390:three_prime_UTR
TTCATTTAATTGCGGATGAA+AGG 0.439284 7_1:+77747840 Msa1040390:CDS
CTTTGGTACTTGCACCTACC+AGG 0.443412 7_1:+77744386 Msa1040390:CDS
GATCTTCTTCGTCACCGAAC+AGG 0.447917 7_1:+77748512 Msa1040390:CDS
ATTATTGCTCGTGCAAAGAC+TGG 0.447972 7_1:+77743570 Msa1040390:CDS
TCCAAAGCTGCTGACGAAGT+TGG 0.448920 7_1:+77747812 Msa1040390:CDS
GCATTTAAAGGATTAGGCTC+TGG 0.451352 7_1:+77743268 Msa1040390:CDS
TGGCGAGACGGTTGATGTGC+CGG 0.452036 7_1:-77743165 None:intergenic
TTACCTCCTTTGCAAGATGA+TGG 0.453438 7_1:+77748250 Msa1040390:CDS
CATGTTGGCGGAATCTCCTT+AGG 0.457008 7_1:+77748894 Msa1040390:three_prime_UTR
AATGCCCAAAAGTAAATTGA+TGG 0.457192 7_1:-77748761 None:intergenic
AGACCGGGAAGACGGAGGTT+GGG 0.458483 7_1:-77746794 None:intergenic
GTTAGCAAAGCAAGTGGAGA+AGG 0.458983 7_1:+77744411 Msa1040390:CDS
GTGGAATTTAACGGAGGAAG+TGG 0.463122 7_1:-77743122 None:intergenic
AACTCTTTAGCAATGTCCTC+TGG 0.466810 7_1:-77748016 None:intergenic
GGCTGATCGACCTCATCAAC+GGG 0.467061 7_1:+77744551 Msa1040390:CDS
CGGGGATGGGATGGAGGTCG+AGG 0.470077 7_1:+77748364 Msa1040390:CDS
AGATGCTGATGAAGTATCAT+TGG 0.470384 7_1:+77745641 Msa1040390:CDS
ATTTGTTACCGTCGGAAAAG+TGG 0.470583 7_1:-77743141 None:intergenic
CTTCTATATTATAACCTGTT+CGG 0.475343 7_1:-77748526 None:intergenic
GCTGATCAGATGCTTGCTGT+TGG 0.475408 7_1:+77744619 Msa1040390:CDS
GGTGGGAGAAGTTATAAATC+TGG 0.475752 7_1:+77748421 Msa1040390:CDS
GAACGTACCAAATCAACATT+GGG 0.476373 7_1:-77745804 None:intergenic
ACAAAAGTCTCGGGATCATT+GGG 0.477148 7_1:-77746475 None:intergenic
GCCAATTTCTTCACCCAACT+AGG 0.477202 7_1:-77744718 None:intergenic
CACTTGCTTTGCTAACTCCC+TGG 0.478986 7_1:-77744404 None:intergenic
CGTACCAAATCAATTGTCAA+TGG 0.481749 7_1:-77744760 None:intergenic
CATCCCTAGAACCTCCTCTT+CGG 0.483200 7_1:-77748321 None:intergenic
TTGGGGAAGGAAGAAGGGGA+GGG 0.483252 7_1:+77749013 Msa1040390:three_prime_UTR
GAGGATTACCTGTGACTGTA+AGG 0.487817 7_1:-77743660 None:intergenic
GTGTTAGTACCTGCACTAGA+AGG 0.488141 7_1:+77743540 Msa1040390:CDS
AGATTCCCCACAATTAAAAC+AGG 0.490200 7_1:-77748685 None:intergenic
GTTATAAATCTGGCAATAGC+TGG 0.490927 7_1:+77748431 Msa1040390:CDS
GGTAATAAGATCAGAAAGAA+TGG 0.491363 7_1:-77745143 None:intergenic
TTAGGAGTAGCGACGGCGGA+AGG 0.494919 7_1:-77743214 None:intergenic
CAGAGAGAAAGAACATTGAA+TGG 0.496669 7_1:+77745717 Msa1040390:CDS
GGGATCTAACTGTTCTCCTC+TGG 0.497793 7_1:-77746564 None:intergenic
GGCGAGACGGTTGATGTGCC+GGG 0.499416 7_1:-77743164 None:intergenic
CGGGATGATTGGTTAATTGG+AGG 0.500819 7_1:+77748475 Msa1040390:CDS
AGAAGGAAAAGAGATACTAA+AGG 0.502613 7_1:-77742955 None:intergenic
AGATCCTCGCGGGGATGGGA+TGG 0.505365 7_1:+77748355 Msa1040390:CDS
GCTGTGCCAGTGCAGCTGCA+AGG 0.506914 7_1:-77746759 None:intergenic
AGATCCCTTGAGCGTGATGT+AGG 0.508810 7_1:+77746580 Msa1040390:CDS
TCATTTAATTGCGGATGAAA+GGG 0.509704 7_1:+77747841 Msa1040390:CDS
TCGGTTACTTCGTTCTCTGT+CGG 0.510905 7_1:-77748302 None:intergenic
GATAAGAACAATTAAAAGCA+TGG 0.511466 7_1:+77748974 Msa1040390:three_prime_UTR
TTTATTTGCATCTCACATGT+TGG 0.511672 7_1:+77748879 Msa1040390:three_prime_UTR
GGATTAGGCTCTGGCTTCGA+CGG 0.513158 7_1:+77743277 Msa1040390:CDS
GAGACCGGGAAGACGGAGGT+TGG 0.513352 7_1:-77746795 None:intergenic
CTGTGCCAGTGCAGCTGCAA+GGG 0.514147 7_1:-77746758 None:intergenic
GCTGTTGGCCTATTGGGGCC+AGG 0.515901 7_1:+77748815 Msa1040390:three_prime_UTR
ATGGCTTCCATAACCGCAAT+CGG 0.517558 7_1:+77743034 Msa1040390:CDS
TCTGGCCGTACTGGCCGTGC+AGG 0.517707 7_1:+77746505 Msa1040390:CDS
GTCGGAAAAGTGGAATTTAA+CGG 0.518962 7_1:-77743131 None:intergenic
ATGAGGTCGATCAGCCTACC+AGG 0.522952 7_1:-77744544 None:intergenic
GACGAAGCATTTAAAGGATT+AGG 0.523474 7_1:+77743262 Msa1040390:CDS
GGTTCGCTTTGAAGTGGAAG+TGG 0.523591 7_1:-77745122 None:intergenic
TGAGCTGAGGTCACTGCTGT+TGG 0.529219 7_1:+77748800 Msa1040390:three_prime_UTR
GCTTTCCTGCACGGCCAGTA+CGG 0.531693 7_1:-77746510 None:intergenic
TGAACGTACCAAATCAACAT+TGG 0.531709 7_1:-77745805 None:intergenic
GGAGGTTCTAGGGATGGGAG+AGG 0.532801 7_1:+77748328 Msa1040390:CDS
AATGCCTAATATCAGGTTCA+AGG 0.533051 7_1:+77747977 Msa1040390:intron
AACTTCCCATAGAAATCACT+TGG 0.534047 7_1:-77748277 None:intergenic
TGCTTTGCTAACTCCCTGGT+AGG 0.534211 7_1:-77744400 None:intergenic
TACACTATAATGCGAGTTGG+AGG 0.536968 7_1:+77742871 Msa1040390:five_prime_UTR
TACAACCTACATCACGCTCA+AGG 0.537071 7_1:-77746585 None:intergenic
AGCTTCCAATACCTGTTCAT+GGG 0.537418 7_1:-77746824 None:intergenic
TACCTCCTTTGCAAGATGAT+GGG 0.537442 7_1:+77748251 Msa1040390:CDS
AGAGGGAAGTTTGCATGCAG+TGG 0.538028 7_1:-77743062 None:intergenic
ATTCAGGTCCTTACAGTCAC+AGG 0.538038 7_1:+77743652 Msa1040390:CDS
AAGAATGGTTCGCTTTGAAG+TGG 0.538212 7_1:-77745128 None:intergenic
CGAAGAGGAGGTTCTAGGGA+TGG 0.542110 7_1:+77748322 Msa1040390:CDS
GCAACTGATGTTGCATCTCG+TGG 0.542360 7_1:+77745771 Msa1040390:CDS
TAACCGAAGAGGAGGTTCTA+GGG 0.542749 7_1:+77748318 Msa1040390:CDS
TTTCCGACGGTAACAAATCC+CGG 0.543380 7_1:+77743146 Msa1040390:CDS
TTGGAAATAGTGTTTCCAGC+TGG 0.544082 7_1:-77748055 None:intergenic
AATCAGTTTCTGTGCAGTTG+GGG 0.544097 7_1:-77746716 None:intergenic
GTTCATGGGTGATAAGAGAC+CGG 0.546130 7_1:-77746810 None:intergenic
TCACTGCTGTTGGCCTATTG+GGG 0.546386 7_1:+77748810 Msa1040390:three_prime_UTR
AGAGCGATGTACAAAAGTCT+CGG 0.546716 7_1:-77746485 None:intergenic
GAGCGATGTACAAAAGTCTC+GGG 0.550245 7_1:-77746484 None:intergenic
ATCATTAATGGTTTAGACGA+TGG 0.550586 7_1:+77743624 Msa1040390:CDS
TGGAAAAGTTCATTTAATTG+CGG 0.551195 7_1:+77747832 Msa1040390:CDS
GAAGAAGAAAAGCTTGCTGA+AGG 0.552690 7_1:+77745076 Msa1040390:CDS
AGTTACACTATAATGCGAGT+TGG 0.553992 7_1:+77742868 None:intergenic
GGTGACTCGTCTAGGAGGGG+TGG 0.556375 7_1:+77748403 Msa1040390:CDS
TTTCTTCACCCAACTAGGCA+TGG 0.558621 7_1:-77744713 None:intergenic
CAAACCAGAAAGAAGCAGTC+GGG 0.559277 7_1:+77748456 Msa1040390:CDS
GGCCTCCAAGTGATTTCTAT+GGG 0.559559 7_1:+77748272 Msa1040390:CDS
ATTTGTTAACGCGCCGTCTG+TGG 0.560587 7_1:+77746615 Msa1040390:CDS
ATATCTCTACCTTCTAGTGC+AGG 0.560589 7_1:-77743549 None:intergenic
GTTGGGTGAAGAAATTGGCC+AGG 0.560995 7_1:+77744722 Msa1040390:CDS
TGGAGAATGAATGGAATGTA+TGG 0.564089 7_1:-77742903 None:intergenic
AAAACTGTTTGTATTTATGG+AGG 0.565125 7_1:+77744460 Msa1040390:CDS
GATGTGGTTGTTGGAACGCC+TGG 0.565544 7_1:+77744526 Msa1040390:CDS
GAAGAGGAGGTTCTAGGGAT+GGG 0.566539 7_1:+77748323 Msa1040390:CDS
TTCATGGGTGATAAGAGACC+GGG 0.566801 7_1:-77746809 None:intergenic
GGTGCAAGTACCAAAGCTCT+AGG 0.571295 7_1:-77744379 None:intergenic
ATTTGCATCTCACATGTTGG+CGG 0.572121 7_1:+77748882 Msa1040390:three_prime_UTR
TTTAGGTTTATGCAAAGGGT+GGG 0.573143 7_1:+77745589 Msa1040390:intron
GTGATAAGAGACCGGGAAGA+CGG 0.574896 7_1:-77746802 None:intergenic
GCTGCACTGGCACAGCTGAG+TGG 0.575476 7_1:+77746766 Msa1040390:CDS
AAGAGATACTAAAGGATAAG+GGG 0.575652 7_1:-77742947 None:intergenic
GGAATCTGGGCATCGAGCGT+CGG 0.576728 7_1:+77748701 Msa1040390:CDS
ACTGGCCGTGCAGGAAAGCT+AGG 0.576836 7_1:+77746514 Msa1040390:CDS
TCCTCGCGGGGATGGGATGG+AGG 0.578302 7_1:+77748358 Msa1040390:CDS
GGCCCATCATCTTGCAAAGG+AGG 0.580430 7_1:-77748253 None:intergenic
TTCCCATAGAAATCACTTGG+AGG 0.580491 7_1:-77748274 None:intergenic
TTGATTCGCTACGTGACCGT+GGG 0.582043 7_1:+77743392 Msa1040390:CDS
AAGAAGAAAAGCTTGCTGAA+GGG 0.582785 7_1:+77745077 Msa1040390:CDS
AGGAGTTGAAATTGGCGAGA+CGG 0.583099 7_1:-77743177 None:intergenic
CCAAAAGTAAATTGATGGGA+GGG 0.584676 7_1:-77748756 None:intergenic
TGCTAAAGAGTTACTTGACA+AGG 0.585432 7_1:+77748027 Msa1040390:CDS
ATCGAGAAAAGAGATGCCTA+AGG 0.585900 7_1:-77748910 None:intergenic
ACAACCTACATCACGCTCAA+GGG 0.586307 7_1:-77746584 None:intergenic
GTGACTCGTCTAGGAGGGGT+GGG 0.588600 7_1:+77748404 Msa1040390:CDS
AGGCTGATCGACCTCATCAA+CGG 0.591466 7_1:+77744550 Msa1040390:CDS
TTTGGTGACTCGTCTAGGAG+GGG 0.591821 7_1:+77748400 Msa1040390:CDS
ACATTGAATGGTTTCAGACA+AGG 0.592237 7_1:+77745729 Msa1040390:CDS
AGCGAATCAACAAGCTGCGA+AGG 0.592383 7_1:-77743379 None:intergenic
CTTGACAAGGACATACCAGC+TGG 0.593348 7_1:+77748040 Msa1040390:CDS
ACTGCCATTCTGATGTTCAC+AGG 0.593717 7_1:+77746538 Msa1040390:CDS
AGAGATACTAAAGGATAAGG+GGG 0.593800 7_1:-77742946 None:intergenic
TTTCAGCAAGATCAGTCACT+GGG 0.593887 7_1:+77747771 Msa1040390:CDS
CAGGGAGTTAGCAAAGCAAG+TGG 0.601393 7_1:+77744405 Msa1040390:CDS
ATGCCCAAAAGTAAATTGAT+GGG 0.601483 7_1:-77748760 None:intergenic
CCAAACCAGAAAGAAGCAGT+CGG 0.603457 7_1:+77748455 Msa1040390:CDS
ATCACTTCTGAAGCACTGCA+TGG 0.604106 7_1:+77745678 Msa1040390:CDS
TGCAGTGGAAGCACCGATTG+CGG 0.604474 7_1:-77743047 None:intergenic
GTGCCGGGATTTGTTACCGT+CGG 0.605031 7_1:-77743149 None:intergenic
TCCAAAACATCTTCCACAGA+CGG 0.607844 7_1:-77746628 None:intergenic
TACATTGCAGAAGCTTTGCA+GGG 0.608735 7_1:+77748661 Msa1040390:intron
GAACGAAGTAACCGAAGAGG+AGG 0.611293 7_1:+77748310 Msa1040390:CDS
CCCAAAAGTAAATTGATGGG+AGG 0.617297 7_1:-77748757 None:intergenic
AGAGAACGAAGTAACCGAAG+AGG 0.622989 7_1:+77748307 Msa1040390:CDS
GCTTGCTGTTGGGTTTGAAG+AGG 0.625665 7_1:+77744630 Msa1040390:CDS
CACTATTTCCAAAGTCACCA+AGG 0.625862 7_1:+77748066 Msa1040390:CDS
ACTTTCGCGTGGTGTTGATG+TGG 0.626921 7_1:+77744510 Msa1040390:CDS
TGGTTGTTGGAACGCCTGGT+AGG 0.628770 7_1:+77744530 Msa1040390:CDS
GCTACCTGTGAACATCAGAA+TGG 0.631735 7_1:-77746542 None:intergenic
GGAGGCCCATCATCTTGCAA+AGG 0.637234 7_1:-77748256 None:intergenic
TGAGTGTGTTCCCGTTGATG+AGG 0.640503 7_1:-77744561 None:intergenic
TTTGGTACTTGCACCTACCA+GGG 0.642527 7_1:+77744387 Msa1040390:CDS
TGAAGAATTAGGAGTAGCGA+CGG 0.646265 7_1:-77743221 None:intergenic
AGAATTAGGAGTAGCGACGG+CGG 0.651222 7_1:-77743218 None:intergenic
GACTGGAACAGGGAAAACAC+TGG 0.654546 7_1:+77743587 Msa1040390:CDS
CAGTACCTAGCTTTCCTGCA+CGG 0.663483 7_1:-77746519 None:intergenic
CAACAGAGTGCACTTTCGCG+TGG 0.665366 7_1:+77744499 Msa1040390:CDS
CTCGTGCAAAGACTGGAACA+GGG 0.665755 7_1:+77743577 Msa1040390:CDS
TCAATAGAAGTAGTTCGTGA+CGG 0.677908 7_1:-77743322 None:intergenic
ATAAGAGACCGGGAAGACGG+AGG 0.679470 7_1:-77746799 None:intergenic
TCGGACTGTCCAAACAAGCG+AGG 0.684486 7_1:+77748720 Msa1040390:CDS
GACTGTCCAAACAAGCGAGG+CGG 0.684929 7_1:+77748723 Msa1040390:CDS
TGATGTTCACAGGTAGCCAG+AGG 0.690579 7_1:+77746548 Msa1040390:CDS
ACCTCCATCCCATCCCCGCG+AGG 0.690754 7_1:-77748359 None:intergenic
GGAAGGAAGAAACCTATCAG+AGG 0.696229 7_1:-77743197 None:intergenic
TTGTCCAATGAAGTGAGCTG+AGG 0.728025 7_1:+77748787 Msa1040390:exon
GGAAAAGTGGAATTTAACGG+AGG 0.734225 7_1:-77743128 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! ACATAAATATTTGAATTTTA+AGG + chr7_1:77746266-77746285 Msa1040390:intron 10.0%
!! AGATTTACAAAATTAAATAT+TGG - chr7_1:77748108-77748127 None:intergenic 10.0%
!!! GTTATAATAATTCTTTTTAT+TGG + chr7_1:77748548-77748567 Msa1040390:intron 10.0%
!!! TTACAATATATCAAAACTTT+TGG - chr7_1:77745309-77745328 None:intergenic 15.0%
!! AGAATATTAAAATTTCAATC+AGG - chr7_1:77747132-77747151 None:intergenic 15.0%
!!! AAGTGTGATTTATTTTTATA+GGG - chr7_1:77747376-77747395 None:intergenic 15.0%
!!! AAAGTGTGATTTATTTTTAT+AGG - chr7_1:77747377-77747396 None:intergenic 15.0%
!!! GTTGATGAAATTTTTTTATA+GGG - chr7_1:77747467-77747486 None:intergenic 15.0%
!!! TGTTGATGAAATTTTTTTAT+AGG - chr7_1:77747468-77747487 None:intergenic 15.0%
!!! AAAAATTTCATCAACATTTT+TGG + chr7_1:77747472-77747491 Msa1040390:intron 15.0%
!!! TTTTTCTTTCTTTTAGTTAA+CGG + chr7_1:77747651-77747670 Msa1040390:intron 15.0%
!! AATGAAAAAATGAAGAAAGA+AGG - chr7_1:77742975-77742994 None:intergenic 20.0%
!! TAATTAGCATATGTTTGTAT+TGG - chr7_1:77744257-77744276 None:intergenic 20.0%
!! TACAAACATATGCTAATTAA+TGG + chr7_1:77744258-77744277 Msa1040390:intron 20.0%
!!! ATTTAAAGCTATGTTTGATA+GGG - chr7_1:77744889-77744908 None:intergenic 20.0%
!!! TATTTAAAGCTATGTTTGAT+AGG - chr7_1:77744890-77744909 None:intergenic 20.0%
!!! CTTTAAATATTGTTGATTTC+AGG + chr7_1:77744901-77744920 Msa1040390:intron 20.0%
!!! TGATTGTAATCTATTGTTTT+TGG - chr7_1:77745019-77745038 None:intergenic 20.0%
!! GATAAAACTATATGCTATAT+CGG + chr7_1:77745099-77745118 Msa1040390:CDS 20.0%
!! TATGAAAGAAAAAATTCAAC+TGG - chr7_1:77745177-77745196 None:intergenic 20.0%
!! AATAACAGTATTATAGAGAT+CGG - chr7_1:77746313-77746332 None:intergenic 20.0%
!! TAAAAGCTGTAACAAATAAA+TGG - chr7_1:77746956-77746975 None:intergenic 20.0%
!! ATATGCAGTAGATAATAAAA+GGG - chr7_1:77747294-77747313 None:intergenic 20.0%
!! AATATGCAGTAGATAATAAA+AGG - chr7_1:77747295-77747314 None:intergenic 20.0%
!! CAAAACTGCATATATTTATA+GGG - chr7_1:77747345-77747364 None:intergenic 20.0%
!! ACAAAACTGCATATATTTAT+AGG - chr7_1:77747346-77747365 None:intergenic 20.0%
!!! AAAGTGTGATTTTATTTTGT+AGG + chr7_1:77747532-77747551 Msa1040390:intron 20.0%
!!! AAGTGTGATTTTATTTTGTA+GGG + chr7_1:77747533-77747552 Msa1040390:intron 20.0%
!! ACAAAACTGTGAATATTTAT+AGG + chr7_1:77747563-77747582 Msa1040390:intron 20.0%
!! CAAAACTGTGAATATTTATA+GGG + chr7_1:77747564-77747583 Msa1040390:intron 20.0%
!! AACTAAAAGAAAGAAAAACT+CGG - chr7_1:77747649-77747668 None:intergenic 20.0%
!!! TTTTCTTTCTTTTAGTTAAC+GGG + chr7_1:77747652-77747671 Msa1040390:intron 20.0%
!!! AATACAAGACAGTTTTAATT+AGG - chr7_1:77747695-77747714 None:intergenic 20.0%
!! AAATCAAATCTATGTTTAAC+CGG + chr7_1:77748623-77748642 Msa1040390:intron 20.0%
!!! ATCAGTTCTGTAATTATTTT+GGG - chr7_1:77748858-77748877 None:intergenic 20.0%
!!! TATCAGTTCTGTAATTATTT+TGG - chr7_1:77748859-77748878 None:intergenic 20.0%
!! AAAATGGAAGAAGATTTTGT+TGG - chr7_1:77742926-77742945 None:intergenic 25.0%
! AAAGAGATACTAAAGGATAA+GGG - chr7_1:77742951-77742970 None:intergenic 25.0%
! AAAAGAGATACTAAAGGATA+AGG - chr7_1:77742952-77742971 None:intergenic 25.0%
!! TTTGGAATTCCTATCATTAA+TGG + chr7_1:77743612-77743631 Msa1040390:CDS 25.0%
! TTAAGCTATTTATCCAAACT+AGG - chr7_1:77743742-77743761 None:intergenic 25.0%
!! TATGTAATGGAAATAGCTTA+TGG - chr7_1:77743914-77743933 None:intergenic 25.0%
!!! ATAAGTTTTGTGAGACTATT+CGG + chr7_1:77743994-77744013 Msa1040390:intron 25.0%
!!! CATTTTTCGTAAGCTTTTTT+CGG + chr7_1:77744042-77744061 Msa1040390:intron 25.0%
! TATAAGCTGTTTAACCAAAT+AGG + chr7_1:77744191-77744210 Msa1040390:intron 25.0%
! ATAAGCTGTTTAACCAAATA+GGG + chr7_1:77744192-77744211 Msa1040390:intron 25.0%
!!! ATACAAACAGTTTTGAGATA+AGG - chr7_1:77744454-77744473 None:intergenic 25.0%
! CTCAAAACTGTTTGTATTTA+TGG + chr7_1:77744457-77744476 Msa1040390:CDS 25.0%
! AAAACTGTTTGTATTTATGG+AGG + chr7_1:77744460-77744479 Msa1040390:CDS 25.0%
! GGTTATATTCTATGTATATG+CGG - chr7_1:77744812-77744831 None:intergenic 25.0%
! ACAAACAAACAGTTATCAAT+TGG - chr7_1:77744833-77744852 None:intergenic 25.0%
!! TTTAAAGCTATGTTTGATAG+GGG - chr7_1:77744888-77744907 None:intergenic 25.0%
!!! TTTCCCGTTTTCTTTTAAAA+AGG + chr7_1:77745045-77745064 Msa1040390:intron 25.0%
!!! CAACCTTTTTAAAAGAAAAC+GGG - chr7_1:77745051-77745070 None:intergenic 25.0%
!!! CCAACCTTTTTAAAAGAAAA+CGG - chr7_1:77745052-77745071 None:intergenic 25.0%
!! TAAATCTTACTGTGTCTTTT+AGG + chr7_1:77745572-77745591 Msa1040390:intron 25.0%
! CTGAATGAACAAAAACATTA+TGG - chr7_1:77745894-77745913 None:intergenic 25.0%
! AATCATCTTCTCAATAAAAC+AGG - chr7_1:77746144-77746163 None:intergenic 25.0%
! ATAACAGTATTATAGAGATC+GGG - chr7_1:77746312-77746331 None:intergenic 25.0%
!! TAAGATTCTTATTTATGCCT+TGG + chr7_1:77746353-77746372 Msa1040390:intron 25.0%
! TTGAACATAGATGAACTTAT+TGG + chr7_1:77746415-77746434 Msa1040390:intron 25.0%
!!! AGCTTCACTTTTTTTTAATC+AGG - chr7_1:77746997-77747016 None:intergenic 25.0%
!!! GTTTTCTCTCTTTTTTGTTT+TGG - chr7_1:77747070-77747089 None:intergenic 25.0%
! GAGAGAAAACAAGTTTAAAA+AGG + chr7_1:77747080-77747099 Msa1040390:intron 25.0%
! AGAAAACAAGTTTAAAAAGG+TGG + chr7_1:77747083-77747102 Msa1040390:intron 25.0%
!!! ATCTACTGCATATTTTTTCT+TGG + chr7_1:77747301-77747320 Msa1040390:intron 25.0%
!!! TCTACTGCATATTTTTTCTT+GGG + chr7_1:77747302-77747321 Msa1040390:intron 25.0%
!! TCTTGGGTTAATTAAGTTTT+TGG + chr7_1:77747318-77747337 Msa1040390:intron 25.0%
! CACATGCATAAAAGAAAAAA+GGG - chr7_1:77747607-77747626 None:intergenic 25.0%
! ACACATGCATAAAAGAAAAA+AGG - chr7_1:77747608-77747627 None:intergenic 25.0%
! TGGAAAAGTTCATTTAATTG+CGG + chr7_1:77747832-77747851 Msa1040390:CDS 25.0%
! TCAACCTAAATGTCATAATT+TGG + chr7_1:77748162-77748181 Msa1040390:intron 25.0%
! ATCAGTAATAATGCAATGAA+TGG - chr7_1:77748191-77748210 None:intergenic 25.0%
! CTTCTATATTATAACCTGTT+CGG - chr7_1:77748529-77748548 None:intergenic 25.0%
! GATAAGAACAATTAAAAGCA+TGG + chr7_1:77748974-77748993 Msa1040390:three_prime_UTR 25.0%
!!! TGGTTTTGCATTCTTATTTT+TGG + chr7_1:77748994-77749013 Msa1040390:three_prime_UTR 25.0%
!!! GGTTTTGCATTCTTATTTTT+GGG + chr7_1:77748995-77749014 Msa1040390:three_prime_UTR 25.0%
!!! GTTTTGCATTCTTATTTTTG+GGG + chr7_1:77748996-77749015 Msa1040390:three_prime_UTR 25.0%
! AGATTTTGTTGGAGAATGAA+TGG - chr7_1:77742915-77742934 None:intergenic 30.0%
AAGAGATACTAAAGGATAAG+GGG - chr7_1:77742950-77742969 None:intergenic 30.0%
AGAAGGAAAAGAGATACTAA+AGG - chr7_1:77742958-77742977 None:intergenic 30.0%
AGAACGAAGAACCATATAAA+TGG + chr7_1:77743015-77743034 Msa1040390:exon 30.0%
AGTGAAGAAGATGAAGAATT+AGG - chr7_1:77743235-77743254 None:intergenic 30.0%
! TTTTGTTAACGAACCTGAAT+AGG - chr7_1:77743433-77743452 None:intergenic 30.0%
TCGTCTAAACCATTAATGAT+AGG - chr7_1:77743624-77743643 None:intergenic 30.0%
ATCATTAATGGTTTAGACGA+TGG + chr7_1:77743624-77743643 Msa1040390:CDS 30.0%
CATAAAATCATCAACGAATG+AGG - chr7_1:77743682-77743701 None:intergenic 30.0%
AATGTGACAGTATCATGTTA+AGG + chr7_1:77743716-77743735 Msa1040390:intron 30.0%
!!! ACTGTTTTTATACACGTTAG+AGG + chr7_1:77743844-77743863 Msa1040390:intron 30.0%
!! TAAGTTTTGTGAGACTATTC+GGG + chr7_1:77743995-77744014 Msa1040390:intron 30.0%
ATAAGTTCTCTAACATAGCT+TGG + chr7_1:77744074-77744093 Msa1040390:intron 30.0%
TAAGTTCTCTAACATAGCTT+GGG + chr7_1:77744075-77744094 Msa1040390:intron 30.0%
!! GTGTTTGTTTCTTTGTTGTT+AGG + chr7_1:77744350-77744369 Msa1040390:intron 30.0%
CAATCCATTGACAATTGATT+TGG + chr7_1:77744756-77744775 Msa1040390:CDS 30.0%
TTAAAGCTATGTTTGATAGG+GGG - chr7_1:77744887-77744906 None:intergenic 30.0%
ATAAATGTTGTGCACAATCA+TGG - chr7_1:77744950-77744969 None:intergenic 30.0%
ATGATTGTGCACAACATTTA+TGG + chr7_1:77744949-77744968 Msa1040390:intron 30.0%
! CACAACATTTATGGCATTTT+AGG + chr7_1:77744958-77744977 Msa1040390:intron 30.0%
!! CCGTTTTCTTTTAAAAAGGT+TGG + chr7_1:77745049-77745068 Msa1040390:intron 30.0%
GGTAATAAGATCAGAAAGAA+TGG - chr7_1:77745146-77745165 None:intergenic 30.0%
AAAATTCAACTGGCAACTTA+CGG - chr7_1:77745167-77745186 None:intergenic 30.0%
TAAACAGAACACACAGAATA+CGG - chr7_1:77745219-77745238 None:intergenic 30.0%
!! AAAACTTTTGGTTACAAGAG+CGG - chr7_1:77745297-77745316 None:intergenic 30.0%
!!! TGTCTTTTAGGTTTATGCAA+AGG + chr7_1:77745584-77745603 Msa1040390:intron 30.0%
!!! GTCTTTTAGGTTTATGCAAA+GGG + chr7_1:77745585-77745604 Msa1040390:intron 30.0%
! TGATATTCCCAATGTTGATT+TGG + chr7_1:77745797-77745816 Msa1040390:CDS 30.0%
TTGTTCATTCAGTTTATACC+AGG + chr7_1:77745902-77745921 Msa1040390:intron 30.0%
TGTTCATTCAGTTTATACCA+GGG + chr7_1:77745903-77745922 Msa1040390:intron 30.0%
CCAAAGTAAAAAACTTCAAG+CGG - chr7_1:77745947-77745966 None:intergenic 30.0%
!!! AAGTTTTTTACTTTGGACTG+TGG + chr7_1:77745951-77745970 Msa1040390:intron 30.0%
!!! AGTTTTTTACTTTGGACTGT+GGG + chr7_1:77745952-77745971 Msa1040390:intron 30.0%
TGCTTGTCCAAGTAAAATTA+AGG + chr7_1:77746115-77746134 Msa1040390:intron 30.0%
CTGAAAACAGATTGAAGAAA+AGG - chr7_1:77746181-77746200 None:intergenic 30.0%
CAGAAACTGATTGAAGAAAA+AGG + chr7_1:77746727-77746746 Msa1040390:CDS 30.0%
TACTGTCACAAAAATCACTT+GGG + chr7_1:77747016-77747035 Msa1040390:intron 30.0%
TATTCTAACATTTGTCCTGA+TGG + chr7_1:77747146-77747165 Msa1040390:intron 30.0%
! TGCTGACGGAAAATTTTATA+GGG - chr7_1:77747436-77747455 None:intergenic 30.0%
! ATGCTGACGGAAAATTTTAT+AGG - chr7_1:77747437-77747456 None:intergenic 30.0%
!! TTTGGTCTCTAAAATGCTTA+AGG + chr7_1:77747490-77747509 Msa1040390:intron 30.0%
CTCGGAAAAACAAAACAAAA+CGG - chr7_1:77747631-77747650 None:intergenic 30.0%
TTAAAACTGTCTTGTATTGC+AGG + chr7_1:77747697-77747716 Msa1040390:intron 30.0%
TAAAACTGTCTTGTATTGCA+GGG + chr7_1:77747698-77747717 Msa1040390:intron 30.0%
TTCATTTAATTGCGGATGAA+AGG + chr7_1:77747840-77747859 Msa1040390:CDS 30.0%
TCATTTAATTGCGGATGAAA+GGG + chr7_1:77747841-77747860 Msa1040390:CDS 30.0%
GCAAATGTTGTAATTTACCT+TGG - chr7_1:77748086-77748105 None:intergenic 30.0%
AAATCTTTGTCCATTGTTTG+TGG + chr7_1:77748122-77748141 Msa1040390:intron 30.0%
!! TTTAGGTTGAGAGAAAAAAC+AGG - chr7_1:77748152-77748171 None:intergenic 30.0%
GATGCCAAATTATGACATTT+AGG - chr7_1:77748169-77748188 None:intergenic 30.0%
ATAAGGCTCATTATGTAACT+TGG - chr7_1:77748596-77748615 None:intergenic 30.0%
! GATTTGATTTCAAGCAGATA+AGG - chr7_1:77748613-77748632 None:intergenic 30.0%
TGTACATTCAAATGTTATGC+CGG - chr7_1:77748645-77748664 None:intergenic 30.0%
ATGCCCAAAAGTAAATTGAT+GGG - chr7_1:77748763-77748782 None:intergenic 30.0%
AATGCCCAAAAGTAAATTGA+TGG - chr7_1:77748764-77748783 None:intergenic 30.0%
TTTATTTGCATCTCACATGT+TGG + chr7_1:77748879-77748898 Msa1040390:three_prime_UTR 30.0%
TATCAAGACTGAAAAACACA+AGG - chr7_1:77748936-77748955 None:intergenic 30.0%
TGGAGAATGAATGGAATGTA+TGG - chr7_1:77742906-77742925 None:intergenic 35.0%
AGAGATACTAAAGGATAAGG+GGG - chr7_1:77742949-77742968 None:intergenic 35.0%
GGTTATGGAAGCCATTTATA+TGG - chr7_1:77743029-77743048 None:intergenic 35.0%
! TTTTTGTAGAGTTCGAGAGA+GGG - chr7_1:77743082-77743101 None:intergenic 35.0%
!!! TTTTTTGTAGAGTTCGAGAG+AGG - chr7_1:77743083-77743102 None:intergenic 35.0%
GTCGGAAAAGTGGAATTTAA+CGG - chr7_1:77743134-77743153 None:intergenic 35.0%
!! GTTAAATTCCACTTTTCCGA+CGG + chr7_1:77743133-77743152 Msa1040390:CDS 35.0%
! GACGAAGCATTTAAAGGATT+AGG + chr7_1:77743262-77743281 Msa1040390:CDS 35.0%
TCAATAGAAGTAGTTCGTGA+CGG - chr7_1:77743325-77743344 None:intergenic 35.0%
!! TACTCAGCTTTTTCCTATTC+AGG + chr7_1:77743417-77743436 Msa1040390:CDS 35.0%
TATCATGTTAAGGCCTAGTT+TGG + chr7_1:77743726-77743745 Msa1040390:intron 35.0%
TCAAATAAGCCAATCCAAAC+AGG - chr7_1:77743960-77743979 None:intergenic 35.0%
AAGTTCTCTAACATAGCTTG+GGG + chr7_1:77744076-77744095 Msa1040390:intron 35.0%
CTTATATCATGATAAGCGCT+TGG - chr7_1:77744177-77744196 None:intergenic 35.0%
GTTGAGTGAAGTTGAGTATT+TGG + chr7_1:77744585-77744604 Msa1040390:CDS 35.0%
! AGAGGATGTAGAAGTCATTT+TGG + chr7_1:77744648-77744667 Msa1040390:CDS 35.0%
TGGATTGTTCAAGTATTTCC+TGG - chr7_1:77744743-77744762 None:intergenic 35.0%
CGTACCAAATCAATTGTCAA+TGG - chr7_1:77744763-77744782 None:intergenic 35.0%
!! AAGAAGAAAAGCTTGCTGAA+GGG + chr7_1:77745077-77745096 Msa1040390:CDS 35.0%
AAACAGAACACACAGAATAC+GGG - chr7_1:77745218-77745237 None:intergenic 35.0%
!! AAACTTTTGGTTACAAGAGC+GGG - chr7_1:77745296-77745315 None:intergenic 35.0%
AACTTATGTGTAGGAAGGAA+TGG - chr7_1:77745392-77745411 None:intergenic 35.0%
CCATAAACTTATGTGTAGGA+AGG - chr7_1:77745397-77745416 None:intergenic 35.0%
CCTTCCTACACATAAGTTTA+TGG + chr7_1:77745394-77745413 Msa1040390:intron 35.0%
ACAGCCATAAACTTATGTGT+AGG - chr7_1:77745401-77745420 None:intergenic 35.0%
! GTACCATATGCTTTAAGCTA+AGG + chr7_1:77745533-77745552 Msa1040390:intron 35.0%
!!! TTTTAGGTTTATGCAAAGGG+TGG + chr7_1:77745588-77745607 Msa1040390:intron 35.0%
! TTTAGGTTTATGCAAAGGGT+GGG + chr7_1:77745589-77745608 Msa1040390:intron 35.0%
! AGATGCTGATGAAGTATCAT+TGG + chr7_1:77745641-77745660 Msa1040390:CDS 35.0%
CATTCAATGTTCTTTCTCTC+TGG - chr7_1:77745719-77745738 None:intergenic 35.0%
CAGAGAGAAAGAACATTGAA+TGG + chr7_1:77745717-77745736 Msa1040390:CDS 35.0%
ACATTGAATGGTTTCAGACA+AGG + chr7_1:77745729-77745748 Msa1040390:CDS 35.0%
GAACGTACCAAATCAACATT+GGG - chr7_1:77745807-77745826 None:intergenic 35.0%
TGAACGTACCAAATCAACAT+TGG - chr7_1:77745808-77745827 None:intergenic 35.0%
!! TGTTGATTTGGTACGTTCAT+AGG + chr7_1:77745809-77745828 Msa1040390:intron 35.0%
TATAGAACCAAAAGCAGGAA+TGG - chr7_1:77745862-77745881 None:intergenic 35.0%
ATGCATATAGAACCAAAAGC+AGG - chr7_1:77745867-77745886 None:intergenic 35.0%
!!! CCGCTTGAAGTTTTTTACTT+TGG + chr7_1:77745944-77745963 Msa1040390:intron 35.0%
!!! GTTTTTTACTTTGGACTGTG+GGG + chr7_1:77745953-77745972 Msa1040390:intron 35.0%
! GGATCTAACTACCAGTTTTT+CGG + chr7_1:77745994-77746013 Msa1040390:intron 35.0%
!! AACTACCAGTTTTTCGGAAT+AGG + chr7_1:77746000-77746019 Msa1040390:intron 35.0%
!! ACTACCAGTTTTTCGGAATA+GGG + chr7_1:77746001-77746020 Msa1040390:intron 35.0%
TAAACCCTATTCCGAAAAAC+TGG - chr7_1:77746008-77746027 None:intergenic 35.0%
ATAAGTCCTAACTCAATCGA+GGG - chr7_1:77746058-77746077 None:intergenic 35.0%
AATAAGTCCTAACTCAATCG+AGG - chr7_1:77746059-77746078 None:intergenic 35.0%
AACAAATCATACCTCAGAGT+AGG - chr7_1:77746083-77746102 None:intergenic 35.0%
!! TACTCTGAGGTATGATTTGT+TGG + chr7_1:77746082-77746101 Msa1040390:intron 35.0%
! CAGGCAACCTTAATTTTACT+TGG - chr7_1:77746125-77746144 None:intergenic 35.0%
TGCATTTCAATACTTGACCA+AGG - chr7_1:77746373-77746392 None:intergenic 35.0%
GATCATTGGGAAGTTCATAA+TGG - chr7_1:77746465-77746484 None:intergenic 35.0%
GTGAAAAATGCAATAGACTC+TGG - chr7_1:77746697-77746716 None:intergenic 35.0%
CTACTGTCACAAAAATCACT+TGG + chr7_1:77747015-77747034 Msa1040390:intron 35.0%
TCACAAAAATCACTTGGGAT+TGG + chr7_1:77747021-77747040 Msa1040390:intron 35.0%
ATAAACAAATGGGGAGGATA+GGG - chr7_1:77747174-77747193 None:intergenic 35.0%
TGCAGTTGCCATAAACAAAT+GGG - chr7_1:77747184-77747203 None:intergenic 35.0%
AGAGAAACTAAAGAAAGGAG+GGG - chr7_1:77747267-77747286 None:intergenic 35.0%
CAGAGAAACTAAAGAAAGGA+GGG - chr7_1:77747268-77747287 None:intergenic 35.0%
ACAGAGAAACTAAAGAAAGG+AGG - chr7_1:77747269-77747288 None:intergenic 35.0%
GAGACAGAGAAACTAAAGAA+AGG - chr7_1:77747272-77747291 None:intergenic 35.0%
! TCCCTACAAAATTTTCCGTT+AGG + chr7_1:77747401-77747420 Msa1040390:intron 35.0%
! CCCTAACGGAAAATTTTGTA+GGG - chr7_1:77747405-77747424 None:intergenic 35.0%
! CCCTACAAAATTTTCCGTTA+GGG + chr7_1:77747402-77747421 Msa1040390:intron 35.0%
! ACCCTAACGGAAAATTTTGT+AGG - chr7_1:77747406-77747425 None:intergenic 35.0%
ATAGGGACTAAAAACCCTAA+CGG - chr7_1:77747419-77747438 None:intergenic 35.0%
ATAGGGACTAAAAATGCTGA+CGG - chr7_1:77747450-77747469 None:intergenic 35.0%
TGCTTAAGGAAAATGTCACA+AGG + chr7_1:77747504-77747523 Msa1040390:intron 35.0%
!! TTTCTTTTAGTTAACGGGTG+TGG + chr7_1:77747657-77747676 Msa1040390:intron 35.0%
!! TTCTTTTAGTTAACGGGTGT+GGG + chr7_1:77747658-77747677 Msa1040390:intron 35.0%
TCTTGGAACTCCAATGTTAT+CGG + chr7_1:77747901-77747920 Msa1040390:intron 35.0%
AACAGTTTAAACAATGCAGG+TGG - chr7_1:77747931-77747950 None:intergenic 35.0%
GTCAACAGTTTAAACAATGC+AGG - chr7_1:77747934-77747953 None:intergenic 35.0%
!! TGATATTAGGCATTGGCATT+TGG - chr7_1:77747971-77747990 None:intergenic 35.0%
AAATGCCAATGCCTAATATC+AGG + chr7_1:77747970-77747989 Msa1040390:intron 35.0%
TTGAACCTGATATTAGGCAT+TGG - chr7_1:77747978-77747997 None:intergenic 35.0%
AATGCCTAATATCAGGTTCA+AGG + chr7_1:77747977-77747996 Msa1040390:intron 35.0%
TGCTAAAGAGTTACTTGACA+AGG + chr7_1:77748027-77748046 Msa1040390:CDS 35.0%
! GTAATTTACCTTGGTGACTT+TGG - chr7_1:77748077-77748096 None:intergenic 35.0%
AACTTCCCATAGAAATCACT+TGG - chr7_1:77748280-77748299 None:intergenic 35.0%
GTTATAAATCTGGCAATAGC+TGG + chr7_1:77748431-77748450 Msa1040390:CDS 35.0%
GCTCATTATGTAACTTGGAA+AGG - chr7_1:77748591-77748610 None:intergenic 35.0%
AGATTCCCCACAATTAAAAC+AGG - chr7_1:77748688-77748707 None:intergenic 35.0%
!!! TGTTTTAATTGTGGGGAATC+TGG + chr7_1:77748687-77748706 Msa1040390:CDS 35.0%
!!! GTTTTAATTGTGGGGAATCT+GGG + chr7_1:77748688-77748707 Msa1040390:CDS 35.0%
CCAAAAGTAAATTGATGGGA+GGG - chr7_1:77748759-77748778 None:intergenic 35.0%
!! CCTCCCATCAATTTACTTTT+GGG + chr7_1:77748757-77748776 Msa1040390:CDS 35.0%
!!! TGCATTCTTATTTTTGGGGA+AGG + chr7_1:77749000-77749019 Msa1040390:three_prime_UTR 35.0%
!!! TTATTTTTGGGGAAGGAAGA+AGG + chr7_1:77749007-77749026 Msa1040390:three_prime_UTR 35.0%
!!! TATTTTTGGGGAAGGAAGAA+GGG + chr7_1:77749008-77749027 Msa1040390:three_prime_UTR 35.0%
! TACACTATAATGCGAGTTGG+AGG + chr7_1:77742871-77742890 Msa1040390:five_prime_UTR 40.0%
CTAAAGGATAAGGGGGAAAA+TGG - chr7_1:77742942-77742961 None:intergenic 40.0%
TTTAACGGAGGAAGTGGAAA+TGG - chr7_1:77743119-77743138 None:intergenic 40.0%
GGAAAAGTGGAATTTAACGG+AGG - chr7_1:77743131-77743150 None:intergenic 40.0%
! ATTTGTTACCGTCGGAAAAG+TGG - chr7_1:77743144-77743163 None:intergenic 40.0%
CCTATCAGAGGAGTTGAAAT+TGG - chr7_1:77743188-77743207 None:intergenic 40.0%
CCAATTTCAACTCCTCTGAT+AGG + chr7_1:77743185-77743204 Msa1040390:CDS 40.0%
TGAAGAATTAGGAGTAGCGA+CGG - chr7_1:77743224-77743243 None:intergenic 40.0%
! CTCAGTGACGAAGCATTTAA+AGG + chr7_1:77743256-77743275 Msa1040390:CDS 40.0%
GCATTTAAAGGATTAGGCTC+TGG + chr7_1:77743268-77743287 Msa1040390:CDS 40.0%
GAAAAAGCTGAGTAATCCCA+CGG - chr7_1:77743411-77743430 None:intergenic 40.0%
GTGTGTGTGTAATTAGAGAG+CGG + chr7_1:77743518-77743537 Msa1040390:intron 40.0%
ATATCTCTACCTTCTAGTGC+AGG - chr7_1:77743552-77743571 None:intergenic 40.0%
ATTATTGCTCGTGCAAAGAC+TGG + chr7_1:77743570-77743589 Msa1040390:CDS 40.0%
TTAGACGATGGTCAAGATTC+AGG + chr7_1:77743636-77743655 Msa1040390:CDS 40.0%
GTTTGGGAGAGCTTATGTAA+TGG - chr7_1:77743927-77743946 None:intergenic 40.0%
AACAGGCCTTAAGACTGTTT+GGG - chr7_1:77743943-77743962 None:intergenic 40.0%
AAACAGGCCTTAAGACTGTT+TGG - chr7_1:77743944-77743963 None:intergenic 40.0%
AAACAGTCTTAAGGCCTGTT+TGG + chr7_1:77743943-77743962 Msa1040390:intron 40.0%
AGCACTTGTAAAGCCCTATT+TGG - chr7_1:77744208-77744227 None:intergenic 40.0%
TGGTACGTTGTTCTTACTTC+AGG + chr7_1:77744776-77744795 Msa1040390:intron 40.0%
GGGAAAAGGAAAAGAAGCAA+AGG - chr7_1:77744867-77744886 None:intergenic 40.0%
CTATGTTTGATAGGGGGAAA+AGG - chr7_1:77744881-77744900 None:intergenic 40.0%
TCATGGCACAAACCATTTGA+TGG - chr7_1:77744933-77744952 None:intergenic 40.0%
!! GAAGAAGAAAAGCTTGCTGA+AGG + chr7_1:77745076-77745095 Msa1040390:CDS 40.0%
!! AAGAATGGTTCGCTTTGAAG+TGG - chr7_1:77745131-77745150 None:intergenic 40.0%
AACAGAACACACAGAATACG+GGG - chr7_1:77745217-77745236 None:intergenic 40.0%
TCTACAACTCATGTAGCTGT+TGG + chr7_1:77745427-77745446 Msa1040390:intron 40.0%
CTACAACTCATGTAGCTGTT+GGG + chr7_1:77745428-77745447 Msa1040390:intron 40.0%
GCTCCTTAGCTTAAAGCATA+TGG - chr7_1:77745539-77745558 None:intergenic 40.0%
TCACTTTATTAATCCAGCCC+TGG - chr7_1:77745923-77745942 None:intergenic 40.0%
! TGGACTGTGGGGTTTTTAAT+TGG + chr7_1:77745964-77745983 Msa1040390:intron 40.0%
!! GGACTGTGGGGTTTTTAATT+GGG + chr7_1:77745965-77745984 Msa1040390:intron 40.0%
!! GACTGTGGGGTTTTTAATTG+GGG + chr7_1:77745966-77745985 Msa1040390:intron 40.0%
!! GGGTTTTTAATTGGGGATTC+AGG + chr7_1:77745973-77745992 Msa1040390:intron 40.0%
TCTTAACCCTCGATTGAGTT+AGG + chr7_1:77746049-77746068 Msa1040390:intron 40.0%
!! GTATGATTTGTTGGCTCGTT+GGG + chr7_1:77746091-77746110 Msa1040390:intron 40.0%
ACAAAAGTCTCGGGATCATT+GGG - chr7_1:77746478-77746497 None:intergenic 40.0%
TACAAAAGTCTCGGGATCAT+TGG - chr7_1:77746479-77746498 None:intergenic 40.0%
AGAGCGATGTACAAAAGTCT+CGG - chr7_1:77746488-77746507 None:intergenic 40.0%
TCCAAAACATCTTCCACAGA+CGG - chr7_1:77746631-77746650 None:intergenic 40.0%
CAAGTTGTTGTCACGCTTAA+TGG + chr7_1:77746664-77746683 Msa1040390:CDS 40.0%
AATCAGTTTCTGTGCAGTTG+GGG - chr7_1:77746719-77746738 None:intergenic 40.0%
CAATCAGTTTCTGTGCAGTT+GGG - chr7_1:77746720-77746739 None:intergenic 40.0%
TCAATCAGTTTCTGTGCAGT+TGG - chr7_1:77746721-77746740 None:intergenic 40.0%
TATCACCCATGAACAGGTAT+TGG + chr7_1:77746819-77746838 Msa1040390:intron 40.0%
AGCTTCCAATACCTGTTCAT+GGG - chr7_1:77746827-77746846 None:intergenic 40.0%
AAGCTTCCAATACCTGTTCA+TGG - chr7_1:77746828-77746847 None:intergenic 40.0%
GAGTTACCTTCCTGACAAAA+AGG + chr7_1:77747105-77747124 Msa1040390:intron 40.0%
! TCAATCAGGACCTTTTTGTC+AGG - chr7_1:77747118-77747137 None:intergenic 40.0%
CATAAACAAATGGGGAGGAT+AGG - chr7_1:77747175-77747194 None:intergenic 40.0%
CTATCCTCCCCATTTGTTTA+TGG + chr7_1:77747173-77747192 Msa1040390:intron 40.0%
GCAGTTGCCATAAACAAATG+GGG - chr7_1:77747183-77747202 None:intergenic 40.0%
GTGCAGTTGCCATAAACAAA+TGG - chr7_1:77747185-77747204 None:intergenic 40.0%
!! TCTTTTAGTTAACGGGTGTG+GGG + chr7_1:77747659-77747678 Msa1040390:intron 40.0%
! TTTTCAGCAAGATCAGTCAC+TGG + chr7_1:77747770-77747789 Msa1040390:CDS 40.0%
TTTCAGCAAGATCAGTCACT+GGG + chr7_1:77747771-77747790 Msa1040390:CDS 40.0%
GTTTCTGTGCTTGTCTTTCT+TGG + chr7_1:77747884-77747903 Msa1040390:intron 40.0%
CTTGGAACTCCAATGTTATC+GGG + chr7_1:77747902-77747921 Msa1040390:intron 40.0%
! GTCCTCTGGAAGATCAAAAA+CGG - chr7_1:77748005-77748024 None:intergenic 40.0%
AACTCTTTAGCAATGTCCTC+TGG - chr7_1:77748019-77748038 None:intergenic 40.0%
TTGGAAATAGTGTTTCCAGC+TGG - chr7_1:77748058-77748077 None:intergenic 40.0%
CACTATTTCCAAAGTCACCA+AGG + chr7_1:77748066-77748085 Msa1040390:CDS 40.0%
!! TTACATGTGCCACTTTGCAT+TGG + chr7_1:77748224-77748243 Msa1040390:intron 40.0%
TTACCTCCTTTGCAAGATGA+TGG + chr7_1:77748250-77748269 Msa1040390:CDS 40.0%
TACCTCCTTTGCAAGATGAT+GGG + chr7_1:77748251-77748270 Msa1040390:CDS 40.0%
TTCCCATAGAAATCACTTGG+AGG - chr7_1:77748277-77748296 None:intergenic 40.0%
!! ATGATTTTGGTGACTCGTCT+AGG + chr7_1:77748395-77748414 Msa1040390:CDS 40.0%
GGTGGGAGAAGTTATAAATC+TGG + chr7_1:77748421-77748440 Msa1040390:CDS 40.0%
! AGTCGGGATGATTGGTTAAT+TGG + chr7_1:77748472-77748491 Msa1040390:CDS 40.0%
TACATTGCAGAAGCTTTGCA+GGG + chr7_1:77748661-77748680 Msa1040390:intron 40.0%
!!! CAGGGACCTGTTTTAATTGT+GGG + chr7_1:77748679-77748698 Msa1040390:CDS 40.0%
!!! AGGGACCTGTTTTAATTGTG+GGG + chr7_1:77748680-77748699 Msa1040390:CDS 40.0%
! CCCTCCCATCAATTTACTTT+TGG + chr7_1:77748756-77748775 Msa1040390:CDS 40.0%
CCCAAAAGTAAATTGATGGG+AGG - chr7_1:77748760-77748779 None:intergenic 40.0%
GATGCATCTTTGAACTTTCC+TGG - chr7_1:77748836-77748855 None:intergenic 40.0%
ATTTGCATCTCACATGTTGG+CGG + chr7_1:77748882-77748901 Msa1040390:three_prime_UTR 40.0%
ATCGAGAAAAGAGATGCCTA+AGG - chr7_1:77748913-77748932 None:intergenic 40.0%
!! ATTTTTGGGGAAGGAAGAAG+GGG + chr7_1:77749009-77749028 Msa1040390:three_prime_UTR 40.0%
ATGGCTTCCATAACCGCAAT+CGG + chr7_1:77743034-77743053 Msa1040390:CDS 45.0%
GTGGAATTTAACGGAGGAAG+TGG - chr7_1:77743125-77743144 None:intergenic 45.0%
TTTCCGACGGTAACAAATCC+CGG + chr7_1:77743146-77743165 Msa1040390:CDS 45.0%
AGGAGTTGAAATTGGCGAGA+CGG - chr7_1:77743180-77743199 None:intergenic 45.0%
GGAAGGAAGAAACCTATCAG+AGG - chr7_1:77743200-77743219 None:intergenic 45.0%
GTGTTAGTACCTGCACTAGA+AGG + chr7_1:77743540-77743559 Msa1040390:CDS 45.0%
!!! ACAGGGAAAACACTGGCTTT+TGG + chr7_1:77743594-77743613 Msa1040390:CDS 45.0%
ATTCAGGTCCTTACAGTCAC+AGG + chr7_1:77743652-77743671 Msa1040390:CDS 45.0%
GAGGATTACCTGTGACTGTA+AGG - chr7_1:77743663-77743682 None:intergenic 45.0%
AGCTCTCCCAAACAGTCTTA+AGG + chr7_1:77743934-77743953 Msa1040390:intron 45.0%
GTCTTAAGGCCTGTTTGGAT+TGG + chr7_1:77743948-77743967 Msa1040390:intron 45.0%
TTTGGTACTTGCACCTACCA+GGG + chr7_1:77744387-77744406 Msa1040390:CDS 45.0%
GTTAGCAAAGCAAGTGGAGA+AGG + chr7_1:77744411-77744430 Msa1040390:CDS 45.0%
!! CTGATCAGATGCTTGCTGTT+GGG + chr7_1:77744620-77744639 Msa1040390:CDS 45.0%
TTTCTGCAACCATGCCTAGT+TGG + chr7_1:77744704-77744723 Msa1040390:CDS 45.0%
TTCTGCAACCATGCCTAGTT+GGG + chr7_1:77744705-77744724 Msa1040390:CDS 45.0%
TTTCTTCACCCAACTAGGCA+TGG - chr7_1:77744716-77744735 None:intergenic 45.0%
GCCTAGTTGGGTGAAGAAAT+TGG + chr7_1:77744717-77744736 Msa1040390:CDS 45.0%
GCCAATTTCTTCACCCAACT+AGG - chr7_1:77744721-77744740 None:intergenic 45.0%
TTCAGGACACTGCCATCAAA+TGG + chr7_1:77744918-77744937 Msa1040390:intron 45.0%
ACAGAACACACAGAATACGG+GGG - chr7_1:77745216-77745235 None:intergenic 45.0%
!! ATCACTTCTGAAGCACTGCA+TGG + chr7_1:77745678-77745697 Msa1040390:CDS 45.0%
AGGAATGGAGTGGTAGAATG+CGG - chr7_1:77745847-77745866 None:intergenic 45.0%
! TACCACTCCATTCCTGCTTT+TGG + chr7_1:77745852-77745871 Msa1040390:intron 45.0%
AACCAAAAGCAGGAATGGAG+TGG - chr7_1:77745857-77745876 None:intergenic 45.0%
CATTCAGTTTATACCAGGGC+TGG + chr7_1:77745907-77745926 Msa1040390:intron 45.0%
AGGACTTATTGCCTACTCTG+AGG + chr7_1:77746069-77746088 Msa1040390:intron 45.0%
!! GGTATGATTTGTTGGCTCGT+TGG + chr7_1:77746090-77746109 Msa1040390:intron 45.0%
GAGCGATGTACAAAAGTCTC+GGG - chr7_1:77746487-77746506 None:intergenic 45.0%
! GAGACTTTTGTACATCGCTC+TGG + chr7_1:77746487-77746506 Msa1040390:CDS 45.0%
ACTGCCATTCTGATGTTCAC+AGG + chr7_1:77746538-77746557 Msa1040390:CDS 45.0%
GCTACCTGTGAACATCAGAA+TGG - chr7_1:77746545-77746564 None:intergenic 45.0%
ACAACCTACATCACGCTCAA+GGG - chr7_1:77746587-77746606 None:intergenic 45.0%
TACAACCTACATCACGCTCA+AGG - chr7_1:77746588-77746607 None:intergenic 45.0%
TTCATGGGTGATAAGAGACC+GGG - chr7_1:77746812-77746831 None:intergenic 45.0%
GTTCATGGGTGATAAGAGAC+CGG - chr7_1:77746813-77746832 None:intergenic 45.0%
GTCTCTTATCACCCATGAAC+AGG + chr7_1:77746813-77746832 Msa1040390:CDS 45.0%
! TCAGGACCTTTTTGTCAGGA+AGG - chr7_1:77747114-77747133 None:intergenic 45.0%
GTTGCCATAAACAAATGGGG+AGG - chr7_1:77747180-77747199 None:intergenic 45.0%
!! CTTTTAGTTAACGGGTGTGG+GGG + chr7_1:77747660-77747679 Msa1040390:intron 45.0%
ACTGTCTTGTATTGCAGGGA+TGG + chr7_1:77747702-77747721 Msa1040390:intron 45.0%
CTGTCTTGTATTGCAGGGAT+GGG + chr7_1:77747703-77747722 Msa1040390:intron 45.0%
! AGGTGGATTCCCGATAACAT+TGG - chr7_1:77747914-77747933 None:intergenic 45.0%
GGCTCCTTGAACCTGATATT+AGG - chr7_1:77747984-77748003 None:intergenic 45.0%
!!! AGCCGTTTTTGATCTTCCAG+AGG + chr7_1:77748000-77748019 Msa1040390:CDS 45.0%
AACAGGCATGCCACAAACAA+TGG - chr7_1:77748135-77748154 None:intergenic 45.0%
AGGTAACTGCCAATGCAAAG+TGG - chr7_1:77748236-77748255 None:intergenic 45.0%
GGCCTCCAAGTGATTTCTAT+GGG + chr7_1:77748272-77748291 Msa1040390:CDS 45.0%
TCGGTTACTTCGTTCTCTGT+CGG - chr7_1:77748305-77748324 None:intergenic 45.0%
AGAGAACGAAGTAACCGAAG+AGG + chr7_1:77748307-77748326 Msa1040390:CDS 45.0%
TAACCGAAGAGGAGGTTCTA+GGG + chr7_1:77748318-77748337 Msa1040390:CDS 45.0%
!! CGAGGCTCTGATGATGATTT+TGG + chr7_1:77748382-77748401 Msa1040390:CDS 45.0%
!! ATTTTGGTGACTCGTCTAGG+AGG + chr7_1:77748398-77748417 Msa1040390:CDS 45.0%
!! TTTTGGTGACTCGTCTAGGA+GGG + chr7_1:77748399-77748418 Msa1040390:CDS 45.0%
CCAAACCAGAAAGAAGCAGT+CGG + chr7_1:77748455-77748474 Msa1040390:CDS 45.0%
CAAACCAGAAAGAAGCAGTC+GGG + chr7_1:77748456-77748475 Msa1040390:CDS 45.0%
AAAGAAGCAGTCGGGATGAT+TGG + chr7_1:77748464-77748483 Msa1040390:CDS 45.0%
! CGGGATGATTGGTTAATTGG+AGG + chr7_1:77748475-77748494 Msa1040390:CDS 45.0%
GTACATTGCAGAAGCTTTGC+AGG + chr7_1:77748660-77748679 Msa1040390:intron 45.0%
!!! GCAGGGACCTGTTTTAATTG+TGG + chr7_1:77748678-77748697 Msa1040390:CDS 45.0%
TTGTCCAATGAAGTGAGCTG+AGG + chr7_1:77748787-77748806 Msa1040390:exon 45.0%
AGAGGGAAGTTTGCATGCAG+TGG - chr7_1:77743065-77743084 None:intergenic 50.0%
AGAATTAGGAGTAGCGACGG+CGG - chr7_1:77743221-77743240 None:intergenic 50.0%
AGCGAATCAACAAGCTGCGA+AGG - chr7_1:77743382-77743401 None:intergenic 50.0%
! TTGATTCGCTACGTGACCGT+GGG + chr7_1:77743392-77743411 Msa1040390:CDS 50.0%
CTCGTGCAAAGACTGGAACA+GGG + chr7_1:77743577-77743596 Msa1040390:CDS 50.0%
GACTGGAACAGGGAAAACAC+TGG + chr7_1:77743587-77743606 Msa1040390:CDS 50.0%
TAGGCGTCTTCCTAGAGCTT+TGG + chr7_1:77744369-77744388 Msa1040390:intron 50.0%
GGTGCAAGTACCAAAGCTCT+AGG - chr7_1:77744382-77744401 None:intergenic 50.0%
CTTTGGTACTTGCACCTACC+AGG + chr7_1:77744386-77744405 Msa1040390:CDS 50.0%
TGCTTTGCTAACTCCCTGGT+AGG - chr7_1:77744403-77744422 None:intergenic 50.0%
CACTTGCTTTGCTAACTCCC+TGG - chr7_1:77744407-77744426 None:intergenic 50.0%
CAGGGAGTTAGCAAAGCAAG+TGG + chr7_1:77744405-77744424 Msa1040390:CDS 50.0%
!! ACTTTCGCGTGGTGTTGATG+TGG + chr7_1:77744510-77744529 Msa1040390:CDS 50.0%
!! CGTGGTGTTGATGTGGTTGT+TGG + chr7_1:77744517-77744536 Msa1040390:CDS 50.0%
AGGCTGATCGACCTCATCAA+CGG + chr7_1:77744550-77744569 Msa1040390:CDS 50.0%
TGAGTGTGTTCCCGTTGATG+AGG - chr7_1:77744564-77744583 None:intergenic 50.0%
!! GCTGATCAGATGCTTGCTGT+TGG + chr7_1:77744619-77744638 Msa1040390:CDS 50.0%
!! GCTTGCTGTTGGGTTTGAAG+AGG + chr7_1:77744630-77744649 Msa1040390:CDS 50.0%
AGCATGCTCTGTCTCTTTGC+TGG - chr7_1:77744682-77744701 None:intergenic 50.0%
GTTGGGTGAAGAAATTGGCC+AGG + chr7_1:77744722-77744741 Msa1040390:CDS 50.0%
!! GGTTCGCTTTGAAGTGGAAG+TGG - chr7_1:77745125-77745144 None:intergenic 50.0%
GCAACTGATGTTGCATCTCG+TGG + chr7_1:77745771-77745790 Msa1040390:CDS 50.0%
! CAGTACCTAGCTTTCCTGCA+CGG - chr7_1:77746522-77746541 None:intergenic 50.0%
TGATGTTCACAGGTAGCCAG+AGG + chr7_1:77746548-77746567 Msa1040390:CDS 50.0%
GGGATCTAACTGTTCTCCTC+TGG - chr7_1:77746567-77746586 None:intergenic 50.0%
AGATCCCTTGAGCGTGATGT+AGG + chr7_1:77746580-77746599 Msa1040390:CDS 50.0%
! ATTTGTTAACGCGCCGTCTG+TGG + chr7_1:77746615-77746634 Msa1040390:CDS 50.0%
! GCCGTCTGTGGAAGATGTTT+TGG + chr7_1:77746627-77746646 Msa1040390:CDS 50.0%
GTGATAAGAGACCGGGAAGA+CGG - chr7_1:77746805-77746824 None:intergenic 50.0%
TGGCAACTGCACTACTCCAA+CGG + chr7_1:77747193-77747212 Msa1040390:intron 50.0%
GTTGTGCAAGAGGAGGTTGA+CGG - chr7_1:77747226-77747245 None:intergenic 50.0%
TCCAAAGCTGCTGACGAAGT+TGG + chr7_1:77747812-77747831 Msa1040390:CDS 50.0%
TCCAACTTCGTCAGCAGCTT+TGG - chr7_1:77747816-77747835 None:intergenic 50.0%
CTTGACAAGGACATACCAGC+TGG + chr7_1:77748040-77748059 Msa1040390:CDS 50.0%
GGGCCTCCAAGTGATTTCTA+TGG + chr7_1:77748271-77748290 Msa1040390:CDS 50.0%
GAACGAAGTAACCGAAGAGG+AGG + chr7_1:77748310-77748329 Msa1040390:CDS 50.0%
GTAACCGAAGAGGAGGTTCT+AGG + chr7_1:77748317-77748336 Msa1040390:CDS 50.0%
CATCCCTAGAACCTCCTCTT+CGG - chr7_1:77748324-77748343 None:intergenic 50.0%
!! GAAGAGGAGGTTCTAGGGAT+GGG + chr7_1:77748323-77748342 Msa1040390:CDS 50.0%
!!! GGAGAGGTTTTAGATCCTCG+CGG + chr7_1:77748344-77748363 Msa1040390:CDS 50.0%
!!! GAGAGGTTTTAGATCCTCGC+GGG + chr7_1:77748345-77748364 Msa1040390:CDS 50.0%
!!! AGAGGTTTTAGATCCTCGCG+GGG + chr7_1:77748346-77748365 Msa1040390:CDS 50.0%
! TTTTAGATCCTCGCGGGGAT+GGG + chr7_1:77748351-77748370 Msa1040390:CDS 50.0%
! TTTGGTGACTCGTCTAGGAG+GGG + chr7_1:77748400-77748419 Msa1040390:CDS 50.0%
!! CCGACTGCTTCTTTCTGGTT+TGG - chr7_1:77748458-77748477 None:intergenic 50.0%
TCATCCCGACTGCTTCTTTC+TGG - chr7_1:77748463-77748482 None:intergenic 50.0%
GATCTTCTTCGTCACCGAAC+AGG + chr7_1:77748512-77748531 Msa1040390:CDS 50.0%
AAAAAGCCGCCTCGCTTGTT+TGG - chr7_1:77748732-77748751 None:intergenic 50.0%
GTGACCTCAGCTCACTTCAT+TGG - chr7_1:77748794-77748813 None:intergenic 50.0%
! GTCACTGCTGTTGGCCTATT+GGG + chr7_1:77748809-77748828 Msa1040390:three_prime_UTR 50.0%
! TCACTGCTGTTGGCCTATTG+GGG + chr7_1:77748810-77748829 Msa1040390:three_prime_UTR 50.0%
TGAACTTTCCTGGCCCCAAT+AGG - chr7_1:77748826-77748845 None:intergenic 50.0%
CATGTTGGCGGAATCTCCTT+AGG + chr7_1:77748894-77748913 Msa1040390:three_prime_UTR 50.0%
!! GGAAGCACCGATTGCGGTTA+TGG - chr7_1:77743044-77743063 None:intergenic 55.0%
!! TGCAGTGGAAGCACCGATTG+CGG - chr7_1:77743050-77743069 None:intergenic 55.0%
!! GTGCCGGGATTTGTTACCGT+CGG - chr7_1:77743152-77743171 None:intergenic 55.0%
! GGATTAGGCTCTGGCTTCGA+CGG + chr7_1:77743277-77743296 Msa1040390:CDS 55.0%
!! GTTGATTCGCTACGTGACCG+TGG + chr7_1:77743391-77743410 Msa1040390:CDS 55.0%
GCTCGTGCAAAGACTGGAAC+AGG + chr7_1:77743576-77743595 Msa1040390:CDS 55.0%
CAACAGAGTGCACTTTCGCG+TGG + chr7_1:77744499-77744518 Msa1040390:CDS 55.0%
GATGTGGTTGTTGGAACGCC+TGG + chr7_1:77744526-77744545 Msa1040390:CDS 55.0%
TGGTTGTTGGAACGCCTGGT+AGG + chr7_1:77744530-77744549 Msa1040390:CDS 55.0%
ATGAGGTCGATCAGCCTACC+AGG - chr7_1:77744547-77744566 None:intergenic 55.0%
GGCTGATCGACCTCATCAAC+GGG + chr7_1:77744551-77744570 Msa1040390:CDS 55.0%
ATAAGAGACCGGGAAGACGG+AGG - chr7_1:77746802-77746821 None:intergenic 55.0%
GGTTGACGGAGAATGACCGT+TGG - chr7_1:77747212-77747231 None:intergenic 55.0%
CGAGAGAGTTGTGCAAGAGG+AGG - chr7_1:77747233-77747252 None:intergenic 55.0%
CAGCGAGAGAGTTGTGCAAG+AGG - chr7_1:77747236-77747255 None:intergenic 55.0%
CTCTTGCACAACTCTCTCGC+TGG + chr7_1:77747234-77747253 Msa1040390:intron 55.0%
GGCCCATCATCTTGCAAAGG+AGG - chr7_1:77748256-77748275 None:intergenic 55.0%
GGAGGCCCATCATCTTGCAA+AGG - chr7_1:77748259-77748278 None:intergenic 55.0%
!! CGAAGAGGAGGTTCTAGGGA+TGG + chr7_1:77748322-77748341 Msa1040390:CDS 55.0%
!! GTTTTAGATCCTCGCGGGGA+TGG + chr7_1:77748350-77748369 Msa1040390:CDS 55.0%
TCGGACTGTCCAAACAAGCG+AGG + chr7_1:77748720-77748739 Msa1040390:CDS 55.0%
GACTGTCCAAACAAGCGAGG+CGG + chr7_1:77748723-77748742 Msa1040390:CDS 55.0%
TGAGCTGAGGTCACTGCTGT+TGG + chr7_1:77748800-77748819 Msa1040390:three_prime_UTR 55.0%
! GGTCACTGCTGTTGGCCTAT+TGG + chr7_1:77748808-77748827 Msa1040390:three_prime_UTR 55.0%
! TGGCGAGACGGTTGATGTGC+CGG - chr7_1:77743168-77743187 None:intergenic 60.0%
TTAGGAGTAGCGACGGCGGA+AGG - chr7_1:77743217-77743236 None:intergenic 60.0%
GTACATCGCTCTGGCCGTAC+TGG + chr7_1:77746496-77746515 Msa1040390:CDS 60.0%
GCTTTCCTGCACGGCCAGTA+CGG - chr7_1:77746513-77746532 None:intergenic 60.0%
ACTGGCCGTGCAGGAAAGCT+AGG + chr7_1:77746514-77746533 Msa1040390:CDS 60.0%
AACTGCCCTTGCAGCTGCAC+TGG + chr7_1:77746753-77746772 Msa1040390:CDS 60.0%
CTGTGCCAGTGCAGCTGCAA+GGG - chr7_1:77746761-77746780 None:intergenic 60.0%
TCTCCCAACCTCCGTCTTCC+CGG + chr7_1:77746791-77746810 Msa1040390:CDS 60.0%
AGACCGGGAAGACGGAGGTT+GGG - chr7_1:77746797-77746816 None:intergenic 60.0%
! GGGGAGGATAGGGTACCATC+AGG - chr7_1:77747164-77747183 None:intergenic 60.0%
!! GGAGGTTCTAGGGATGGGAG+AGG + chr7_1:77748328-77748347 Msa1040390:CDS 60.0%
GTGACTCGTCTAGGAGGGGT+GGG + chr7_1:77748404-77748423 Msa1040390:CDS 60.0%
!! GGAATCTGGGCATCGAGCGT+CGG + chr7_1:77748701-77748720 Msa1040390:CDS 60.0%
! GGCGAGACGGTTGATGTGCC+GGG - chr7_1:77743167-77743186 None:intergenic 65.0%
GCTGTGCCAGTGCAGCTGCA+AGG - chr7_1:77746762-77746781 None:intergenic 65.0%
! GCTGCACTGGCACAGCTGAG+TGG + chr7_1:77746766-77746785 Msa1040390:CDS 65.0%
GAGACCGGGAAGACGGAGGT+TGG - chr7_1:77746798-77746817 None:intergenic 65.0%
AGATCCTCGCGGGGATGGGA+TGG + chr7_1:77748355-77748374 Msa1040390:CDS 65.0%
GGTGACTCGTCTAGGAGGGG+TGG + chr7_1:77748403-77748422 Msa1040390:CDS 65.0%
! GCTGTTGGCCTATTGGGGCC+AGG + chr7_1:77748815-77748834 Msa1040390:three_prime_UTR 65.0%
! TCTGGCCGTACTGGCCGTGC+AGG + chr7_1:77746505-77746524 Msa1040390:CDS 70.0%
TCCTCGCGGGGATGGGATGG+AGG + chr7_1:77748358-77748377 Msa1040390:CDS 70.0%
ACCTCCATCCCATCCCCGCG+AGG - chr7_1:77748362-77748381 None:intergenic 70.0%
CGGGGATGGGATGGAGGTCG+AGG + chr7_1:77748364-77748383 Msa1040390:CDS 70.0%
Chromosome Type Strat End Strand Name
chr7_1 gene 77742870 77749032 77742870 ID=Msa1040390;Name=Msa1040390
chr7_1 mRNA 77742870 77749032 77742870 ID=Msa1040390-mRNA-1;Parent=Msa1040390;Name=Msa1040390-mRNA-1;_AED=0.06;_eAED=0.06;_QI=164|1|1|1|1|1|10|235|767
chr7_1 exon 77742870 77743438 77742870 ID=Msa1040390-mRNA-1:exon:20523;Parent=Msa1040390-mRNA-1
chr7_1 exon 77743534 77743673 77743534 ID=Msa1040390-mRNA-1:exon:20524;Parent=Msa1040390-mRNA-1
chr7_1 exon 77744372 77744777 77744372 ID=Msa1040390-mRNA-1:exon:20525;Parent=Msa1040390-mRNA-1
chr7_1 exon 77745067 77745165 77745067 ID=Msa1040390-mRNA-1:exon:20526;Parent=Msa1040390-mRNA-1
chr7_1 exon 77745594 77745818 77745594 ID=Msa1040390-mRNA-1:exon:20527;Parent=Msa1040390-mRNA-1
chr7_1 exon 77746457 77746834 77746457 ID=Msa1040390-mRNA-1:exon:20528;Parent=Msa1040390-mRNA-1
chr7_1 exon 77747719 77747862 77747719 ID=Msa1040390-mRNA-1:exon:20529;Parent=Msa1040390-mRNA-1
chr7_1 exon 77747992 77748087 77747992 ID=Msa1040390-mRNA-1:exon:20530;Parent=Msa1040390-mRNA-1
chr7_1 exon 77748250 77748533 77748250 ID=Msa1040390-mRNA-1:exon:20531;Parent=Msa1040390-mRNA-1
chr7_1 exon 77748671 77749032 77748671 ID=Msa1040390-mRNA-1:exon:20532;Parent=Msa1040390-mRNA-1
chr7_1 five_prime_UTR 77742870 77743033 77742870 ID=Msa1040390-mRNA-1:five_prime_utr;Parent=Msa1040390-mRNA-1
chr7_1 CDS 77743034 77743438 77743034 ID=Msa1040390-mRNA-1:cds;Parent=Msa1040390-mRNA-1
chr7_1 CDS 77743534 77743673 77743534 ID=Msa1040390-mRNA-1:cds;Parent=Msa1040390-mRNA-1
chr7_1 CDS 77744372 77744777 77744372 ID=Msa1040390-mRNA-1:cds;Parent=Msa1040390-mRNA-1
chr7_1 CDS 77745067 77745165 77745067 ID=Msa1040390-mRNA-1:cds;Parent=Msa1040390-mRNA-1
chr7_1 CDS 77745594 77745818 77745594 ID=Msa1040390-mRNA-1:cds;Parent=Msa1040390-mRNA-1
chr7_1 CDS 77746457 77746834 77746457 ID=Msa1040390-mRNA-1:cds;Parent=Msa1040390-mRNA-1
chr7_1 CDS 77747719 77747862 77747719 ID=Msa1040390-mRNA-1:cds;Parent=Msa1040390-mRNA-1
chr7_1 CDS 77747992 77748087 77747992 ID=Msa1040390-mRNA-1:cds;Parent=Msa1040390-mRNA-1
chr7_1 CDS 77748250 77748533 77748250 ID=Msa1040390-mRNA-1:cds;Parent=Msa1040390-mRNA-1
chr7_1 CDS 77748671 77748797 77748671 ID=Msa1040390-mRNA-1:cds;Parent=Msa1040390-mRNA-1
chr7_1 three_prime_UTR 77748798 77749032 77748798 ID=Msa1040390-mRNA-1:three_prime_utr;Parent=Msa1040390-mRNA-1
Gene Sequence

>Msa1040390

ATGGCTTCCATAACCGCAATCGGTGCTTCCACTGCATGCAAACTTCCCTCTCTCGAACTCTACAAAAAACACAAACTAACTTCCATTTCCACTTCCTCCGTTAAATTCCACTTTTCCGACGGTAACAAATCCCGGCACATCAACCGTCTCGCCAATTTCAACTCCTCTGATAGGTTTCTTCCTTCCGCCGTCGCTACTCCTAATTCTTCATCTTCTTCACTTCTCAGTGACGAAGCATTTAAAGGATTAGGCTCTGGCTTCGACGGAGAATCTGAAGACGAAGATTTTCCGTCACGAACTACTTCTATTGACGCTGATGAACTCGACATTTCTAAACTCGATTTGCCTTCGCAGCTTGTTGATTCGCTACGTGACCGTGGGATTACTCAGCTTTTTCCTATTCAGAGAGCGGTGTTAGTACCTGCACTAGAAGGTAGAGATATTATTGCTCGTGCAAAGACTGGAACAGGGAAAACACTGGCTTTTGGAATTCCTATCATTAATGGTTTAGACGATGGTCAAGATTCAGGTCCTTACAGTCACAGGCGTCTTCCTAGAGCTTTGGTACTTGCACCTACCAGGGAGTTAGCAAAGCAAGTGGAGAAGGAGATAAAAGAATCTGCGCCTTATCTCAAAACTGTTTGTATTTATGGAGGTGTTTCTTATGTTACTCAACAGAGTGCACTTTCGCGTGGTGTTGATGTGGTTGTTGGAACGCCTGGTAGGCTGATCGACCTCATCAACGGGAACACACTCAAGTTGAGTGAAGTTGAGTATTTGGTACTCGACGAAGCTGATCAGATGCTTGCTGTTGGGTTTGAAGAGGATGTAGAAGTCATTTTGGAAAAGCTTCCAGCAAAGAGACAGAGCATGCTTTTTTCTGCAACCATGCCTAGTTGGGTGAAGAAATTGGCCAGGAAATACTTGAACAATCCATTGACAATTGATTTGGTTGGTGATGAAGAAGAAAAGCTTGCTGAAGGGATAAAACTATATGCTATATCGGCCACTTCCACTTCAAAGCGAACCATTCTTTCTGATCTTATTACCGTTTATGCAAAGGGTGGGAAGACTATAGTTTTTACGCAGACAAAAAGAGATGCTGATGAAGTATCATTGGCATTAACAAATAGTATCACTTCTGAAGCACTGCATGGTGATATATCTCAGCACCAGAGAGAAAGAACATTGAATGGTTTCAGACAAGGAAAATTTACAGTGCTTGTTGCAACTGATGTTGCATCTCGTGGACTTGATATTCCCAATGTTGATTTGATTATCCATTATGAACTTCCCAATGATCCCGAGACTTTTGTACATCGCTCTGGCCGTACTGGCCGTGCAGGAAAGCTAGGTACTGCCATTCTGATGTTCACAGGTAGCCAGAGGAGAACAGTTAGATCCCTTGAGCGTGATGTAGGTTGTAAATTTGAATTTGTTAACGCGCCGTCTGTGGAAGATGTTTTGGAGTCATCTGCTGAGCAAGTTGTTGTCACGCTTAATGGAGTTCATCCAGAGTCTATTGCATTTTTCACCCCAACTGCACAGAAACTGATTGAAGAAAAAGGAACAACTGCCCTTGCAGCTGCACTGGCACAGCTGAGTGGATTCTCCCAACCTCCGTCTTCCCGGTCTCTTATCACCCATGAACAGGGATGGGTTACATTGCAATTAACTAGAGATTCAGAAAATTCTCAAAGATATTTTTCAGCAAGATCAGTCACTGGGTTTCTTTCTGATGTATATTCCAAAGCTGCTGACGAAGTTGGAAAAGTTCATTTAATTGCGGATGAAAGGGTTCAAGGAGCCGTTTTTGATCTTCCAGAGGACATTGCTAAAGAGTTACTTGACAAGGACATACCAGCTGGAAACACTATTTCCAAAGTCACCAAGTTACCTCCTTTGCAAGATGATGGGCCTCCAAGTGATTTCTATGGGAAGTTTTCCGACAGAGAACGAAGTAACCGAAGAGGAGGTTCTAGGGATGGGAGAGGTTTTAGATCCTCGCGGGGATGGGATGGAGGTCGAGGCTCTGATGATGATTTTGGTGACTCGTCTAGGAGGGGTGGGAGAAGTTATAAATCTGGCAATAGCTGGTCCAAACCAGAAAGAAGCAGTCGGGATGATTGGTTAATTGGAGGCAGACAATCGAGCAGATCTTCTTCGTCACCGAACAGAAGCTTTGCAGGGACCTGTTTTAATTGTGGGGAATCTGGGCATCGAGCGTCGGACTGTCCAAACAAGCGAGGCGGCTTTTTTAAGCCCTCCCATCAATTTACTTTTGGGCATTGCTTTGTCCAATGA
Protein sequence

>Msa1040390

MASITAIGASTACKLPSLELYKKHKLTSISTSSVKFHFSDGNKSRHINRLANFNSSDRFLPSAVATPNSSSSSLLSDEAFKGLGSGFDGESEDEDFPSRTTSIDADELDISKLDLPSQLVDSLRDRGITQLFPIQRAVLVPALEGRDIIARAKTGTGKTLAFGIPIINGLDDGQDSGPYSHRRLPRALVLAPTRELAKQVEKEIKESAPYLKTVCIYGGVSYVTQQSALSRGVDVVVGTPGRLIDLINGNTLKLSEVEYLVLDEADQMLAVGFEEDVEVILEKLPAKRQSMLFSATMPSWVKKLARKYLNNPLTIDLVGDEEEKLAEGIKLYAISATSTSKRTILSDLITVYAKGGKTIVFTQTKRDADEVSLALTNSITSEALHGDISQHQRERTLNGFRQGKFTVLVATDVASRGLDIPNVDLIIHYELPNDPETFVHRSGRTGRAGKLGTAILMFTGSQRRTVRSLERDVGCKFEFVNAPSVEDVLESSAEQVVVTLNGVHPESIAFFTPTAQKLIEEKGTTALAAALAQLSGFSQPPSSRSLITHEQGWVTLQLTRDSENSQRYFSARSVTGFLSDVYSKAADEVGKVHLIADERVQGAVFDLPEDIAKELLDKDIPAGNTISKVTKLPPLQDDGPPSDFYGKFSDRERSNRRGGSRDGRGFRSSRGWDGGRGSDDDFGDSSRRGGRSYKSGNSWSKPERSSRDDWLIGGRQSSRSSSSPNRSFAGTCFNCGESGHRASDCPNKRGGFFKPSHQFTFGHCFVQ*