Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0662890 | XP_003594704.1 | 96.396 | 222 | 8 | 0 | 1 | 222 | 1 | 222 | 7.88e-152 | 431 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0662890 | A2Q675 | 96.396 | 222 | 8 | 0 | 1 | 222 | 1 | 222 | 3.77e-152 | 431 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0012940 | Msa0662890 | 0.801039 | 1.086726e-48 | -8.615850e-47 |
| Msa0029630 | Msa0662890 | 0.808557 | 2.921378e-50 | -8.615850e-47 |
| Msa0033880 | Msa0662890 | 0.801613 | 8.288210e-49 | -8.615850e-47 |
| Msa0041690 | Msa0662890 | 0.834094 | 3.656933e-56 | -8.615850e-47 |
| Msa0046560 | Msa0662890 | 0.804887 | 1.740921e-49 | -8.615850e-47 |
| Msa0077900 | Msa0662890 | 0.804225 | 2.392447e-49 | -8.615850e-47 |
| Msa0079920 | Msa0662890 | 0.814055 | 1.871714e-51 | -8.615850e-47 |
| Msa0080730 | Msa0662890 | 0.832489 | 9.181720e-56 | -8.615850e-47 |
| Msa0105520 | Msa0662890 | 0.816691 | 4.852231e-52 | -8.615850e-47 |
| Msa0106620 | Msa0662890 | 0.856362 | 3.385798e-62 | -8.615850e-47 |
| Msa0106710 | Msa0662890 | 0.835326 | 1.791350e-56 | -8.615850e-47 |
| Msa0119900 | Msa0662890 | 0.825175 | 5.410761e-54 | -8.615850e-47 |
| Msa0616450 | Msa0662890 | 0.824337 | 8.525940e-54 | -8.615850e-47 |
| Msa0628420 | Msa0662890 | 0.808370 | 3.202725e-50 | -8.615850e-47 |
| Msa0630940 | Msa0662890 | 0.804803 | 1.812794e-49 | -8.615850e-47 |
| Msa0640940 | Msa0662890 | 0.819931 | 8.960994e-53 | -8.615850e-47 |
| Msa0642970 | Msa0662890 | 0.815565 | 8.660741e-52 | -8.615850e-47 |
| Msa0644030 | Msa0662890 | 0.814486 | 1.503792e-51 | -8.615850e-47 |
| Msa0644800 | Msa0662890 | 0.818700 | 1.709544e-52 | -8.615850e-47 |
| Msa0651560 | Msa0662890 | 0.804145 | 2.486297e-49 | -8.615850e-47 |
| Msa0655920 | Msa0662890 | 0.816763 | 4.677280e-52 | -8.615850e-47 |
| Msa0662890 | Msa0669180 | 0.840561 | 8.072044e-58 | -8.615850e-47 |
| Msa0662890 | Msa0672550 | 0.801322 | 9.509988e-49 | -8.615850e-47 |
| Msa0662890 | Msa0679360 | 0.816818 | 4.546134e-52 | -8.615850e-47 |
| Msa0662890 | Msa0698100 | 0.826601 | 2.479994e-54 | -8.615850e-47 |
| Msa0662890 | Msa0705390 | 0.803066 | 4.163050e-49 | -8.615850e-47 |
| Msa0662890 | Msa0709120 | 0.815677 | 8.180368e-52 | -8.615850e-47 |
| Msa0662890 | Msa0712560 | 0.801774 | 7.682709e-49 | -8.615850e-47 |
| Msa0662890 | Msa0735550 | 0.800427 | 1.448754e-48 | -8.615850e-47 |
| Msa0662890 | Msa0743530 | 0.813970 | 1.954255e-51 | -8.615850e-47 |
| Msa0662890 | Msa0750250 | 0.803727 | 3.036520e-49 | -8.615850e-47 |
| Msa0662890 | Msa0752700 | 0.800584 | 1.345592e-48 | -8.615850e-47 |
| Msa0662890 | Msa0783860 | 0.802775 | 4.779348e-49 | -8.615850e-47 |
| Msa0662890 | Msa0789560 | 0.829946 | 3.872396e-55 | -8.615850e-47 |
| Msa0662890 | Msa0794970 | 0.806843 | 6.755869e-50 | -8.615850e-47 |
| Msa0662890 | Msa0800370 | 0.801091 | 1.060527e-48 | -8.615850e-47 |
| Msa0662890 | Msa0831100 | 0.818028 | 2.426664e-52 | -8.615850e-47 |
| Msa0662890 | Msa0833190 | -0.819734 | 9.941218e-53 | -8.615850e-47 |
| Msa0662890 | Msa0870650 | 0.844978 | 5.409377e-59 | -8.615850e-47 |
| Msa0662890 | Msa0883520 | 0.809797 | 1.584114e-50 | -8.615850e-47 |
| Msa0662890 | Msa0892640 | 0.829351 | 5.404765e-55 | -8.615850e-47 |
| Msa0662890 | Msa0903780 | 0.828269 | 9.872689e-55 | -8.615850e-47 |
| Msa0662890 | Msa0934140 | 0.832013 | 1.204436e-55 | -8.615850e-47 |
| Msa0662890 | Msa0959520 | 0.821851 | 3.241590e-53 | -8.615850e-47 |
| Msa0662890 | Msa0970600 | 0.811593 | 6.479779e-51 | -8.615850e-47 |
| Msa0662890 | Msa0971650 | 0.804851 | 1.771031e-49 | -8.615850e-47 |
| Msa0662890 | Msa0974950 | 0.834274 | 3.294549e-56 | -8.615850e-47 |
| Msa0662890 | Msa0985220 | 0.820690 | 6.004027e-53 | -8.615850e-47 |
| Msa0662890 | Msa1002960 | 0.827454 | 1.551009e-54 | -8.615850e-47 |
| Msa0662890 | Msa1027300 | 0.808384 | 3.179937e-50 | -8.615850e-47 |
| Msa0662890 | Msa1027360 | 0.800431 | 1.445744e-48 | -8.615850e-47 |
| Msa0662890 | Msa1029070 | 0.801750 | 7.770434e-49 | -8.615850e-47 |
| Msa0662890 | Msa1063420 | 0.811415 | 7.080723e-51 | -8.615850e-47 |
| Msa0662890 | Msa1068870 | 0.802047 | 6.751652e-49 | -8.615850e-47 |
| Msa0662890 | Msa1072600 | 0.802263 | 6.096240e-49 | -8.615850e-47 |
| Msa0662890 | Msa1078420 | 0.802784 | 4.760202e-49 | -8.615850e-47 |
| Msa0662890 | Msa1089450 | 0.823082 | 1.677289e-53 | -8.615850e-47 |
| Msa0662890 | Msa1093100 | 0.833239 | 5.976786e-56 | -8.615850e-47 |
| Msa0662890 | Msa1098890 | 0.810222 | 1.283447e-50 | -8.615850e-47 |
| Msa0662890 | Msa1123350 | 0.823867 | 1.099389e-53 | -8.615850e-47 |
| Msa0662890 | Msa1126830 | 0.804438 | 2.160041e-49 | -8.615850e-47 |
| Msa0662890 | Msa1127430 | 0.815537 | 8.787973e-52 | -8.615850e-47 |
| Msa0662890 | Msa1127540 | 0.827050 | 1.937692e-54 | -8.615850e-47 |
| Msa0662890 | Msa1127590 | 0.841823 | 3.760591e-58 | -8.615850e-47 |
| Msa0662890 | Msa1130400 | 0.811523 | 6.709258e-51 | -8.615850e-47 |
| Msa0662890 | Msa1156160 | 0.802269 | 6.078000e-49 | -8.615850e-47 |
| Msa0662890 | Msa1158230 | 0.800534 | 1.377917e-48 | -8.615850e-47 |
| Msa0662890 | Msa1165780 | 0.812071 | 5.099336e-51 | -8.615850e-47 |
| Msa0662890 | Msa1201640 | 0.832208 | 1.077534e-55 | -8.615850e-47 |
| Msa0662890 | Msa1202580 | 0.811961 | 5.387496e-51 | -8.615850e-47 |
| Msa0662890 | Msa1206650 | 0.842847 | 2.013131e-58 | -8.615850e-47 |
| Msa0662890 | Msa1211340 | 0.802836 | 4.643409e-49 | -8.615850e-47 |
| Msa0662890 | Msa1212950 | 0.811330 | 7.390721e-51 | -8.615850e-47 |
| Msa0662890 | Msa1234620 | 0.817807 | 2.722635e-52 | -8.615850e-47 |
| Msa0662890 | Msa1254620 | 0.831718 | 1.424305e-55 | -8.615850e-47 |
| Msa0662890 | Msa1257070 | 0.818120 | 2.313265e-52 | -8.615850e-47 |
| Msa0662890 | Msa1259640 | 0.801744 | 7.791356e-49 | -8.615850e-47 |
| Msa0662890 | Msa1264420 | 0.806352 | 8.574896e-50 | -8.615850e-47 |
| Msa0662890 | Msa1265590 | 0.815776 | 7.774130e-52 | -8.615850e-47 |
| Msa0662890 | Msa1271130 | 0.801584 | 8.405312e-49 | -8.615850e-47 |
| Msa0662890 | Msa1276970 | 0.864442 | 1.212634e-64 | -8.615850e-47 |
| Msa0662890 | Msa1277080 | 0.802354 | 5.838724e-49 | -8.615850e-47 |
| Msa0662890 | Msa1292020 | 0.804044 | 2.609726e-49 | -8.615850e-47 |
| Msa0662890 | Msa1317950 | 0.802446 | 5.588924e-49 | -8.615850e-47 |
| Msa0662890 | Msa1317960 | 0.809764 | 1.610174e-50 | -8.615850e-47 |
| Msa0662890 | Msa1329050 | -0.805835 | 1.101693e-49 | -8.615850e-47 |
| Msa0662890 | Msa1329790 | 0.812987 | 3.214536e-51 | -8.615850e-47 |
| Msa0662890 | Msa1332590 | 0.806289 | 8.841926e-50 | -8.615850e-47 |
| Msa0662890 | Msa1335160 | 0.800510 | 1.393540e-48 | -8.615850e-47 |
| Msa0662890 | Msa1336040 | 0.838558 | 2.677733e-57 | -8.615850e-47 |
| Msa0662890 | Msa1342630 | 0.829458 | 5.091426e-55 | -8.615850e-47 |
| Msa0662890 | Msa1344310 | 0.807971 | 3.894918e-50 | -8.615850e-47 |
| Msa0662890 | Msa1349520 | 0.811077 | 8.382910e-51 | -8.615850e-47 |
| Msa0662890 | Msa1351540 | 0.817920 | 2.566721e-52 | -8.615850e-47 |
| Msa0662890 | Msa1356610 | 0.830730 | 2.491614e-55 | -8.615850e-47 |
| Msa0662890 | Msa1369690 | 0.829678 | 4.501239e-55 | -8.615850e-47 |
| Msa0662890 | Msa1370590 | 0.811594 | 6.475679e-51 | -8.615850e-47 |
| Msa0662890 | Msa1384100 | 0.815867 | 7.416682e-52 | -8.615850e-47 |
| Msa0662890 | Msa1391480 | 0.821512 | 3.882455e-53 | -8.615850e-47 |
| Msa0662890 | Msa1393820 | 0.803808 | 2.920585e-49 | -8.615850e-47 |
| Msa0662890 | Msa1398790 | 0.807755 | 4.329854e-50 | -8.615850e-47 |
| Msa0662890 | Msa1410420 | 0.816861 | 4.445132e-52 | -8.615850e-47 |
| Msa0662890 | Msa1411000 | 0.801239 | 9.888534e-49 | -8.615850e-47 |
| Msa0662890 | Msa1411950 | 0.812316 | 4.506718e-51 | -8.615850e-47 |
| Msa0662890 | Msa1416260 | 0.814161 | 1.774172e-51 | -8.615850e-47 |
| Msa0662890 | Msa1416370 | 0.811282 | 7.570066e-51 | -8.615850e-47 |
| Msa0662890 | Msa1418240 | 0.806615 | 7.546675e-50 | -8.615850e-47 |
| Msa0662890 | Msa1424350 | 0.831191 | 1.920406e-55 | -8.615850e-47 |
| Msa0662890 | Msa1433870 | 0.802844 | 4.626938e-49 | -8.615850e-47 |
| Msa0662890 | Msa1444120 | 0.815225 | 1.030875e-51 | -8.615850e-47 |
| Msa0662890 | Msa1446080 | 0.818342 | 2.060256e-52 | -8.615850e-47 |
| Msa0662890 | Msa1447180 | 0.804051 | 2.601050e-49 | -8.615850e-47 |
| Msa0662890 | Msa1450720 | 0.842596 | 2.348146e-58 | -8.615850e-47 |
| Msa0662890 | Msa1454530 | 0.811013 | 8.655301e-51 | -8.615850e-47 |
| Msa0662890 | Msa1458810 | 0.805467 | 1.316116e-49 | -8.615850e-47 |
| Msa0662890 | Msa1459960 | 0.811911 | 5.524680e-51 | -8.615850e-47 |
| Msa0662890 | Msa1463030 | 0.813110 | 3.021503e-51 | -8.615850e-47 |
| Msa0138360 | Msa0662890 | 0.805926 | 1.054529e-49 | -8.615850e-47 |
| Msa0139670 | Msa0662890 | 0.817495 | 3.201967e-52 | -8.615850e-47 |
| Msa0141400 | Msa0662890 | 0.826483 | 2.647222e-54 | -8.615850e-47 |
| Msa0142410 | Msa0662890 | 0.823545 | 1.307250e-53 | -8.615850e-47 |
| Msa0147980 | Msa0662890 | 0.807291 | 5.431852e-50 | -8.615850e-47 |
| Msa0169610 | Msa0662890 | 0.825297 | 5.061244e-54 | -8.615850e-47 |
| Msa0173800 | Msa0662890 | 0.817626 | 2.991728e-52 | -8.615850e-47 |
| Msa0174000 | Msa0662890 | 0.804220 | 2.398254e-49 | -8.615850e-47 |
| Msa0192640 | Msa0662890 | 0.832661 | 8.323410e-56 | -8.615850e-47 |
| Msa0199420 | Msa0662890 | 0.995289 | 8.250582e-215 | -8.615850e-47 |
| Msa0202110 | Msa0662890 | 0.808000 | 3.838740e-50 | -8.615850e-47 |
| Msa0204960 | Msa0662890 | 0.804132 | 2.502163e-49 | -8.615850e-47 |
| Msa0206830 | Msa0662890 | 0.800250 | 1.573914e-48 | -8.615850e-47 |
| Msa0220730 | Msa0662890 | 0.824095 | 9.718827e-54 | -8.615850e-47 |
| Msa0231190 | Msa0662890 | 0.828997 | 6.583939e-55 | -8.615850e-47 |
| Msa0237210 | Msa0662890 | 0.811007 | 8.681599e-51 | -8.615850e-47 |
| Msa0376280 | Msa0662890 | 0.810438 | 1.152883e-50 | -8.615850e-47 |
| Msa0378970 | Msa0662890 | 0.814881 | 1.228972e-51 | -8.615850e-47 |
| Msa0382310 | Msa0662890 | 0.809154 | 2.177422e-50 | -8.615850e-47 |
| Msa0382370 | Msa0662890 | 0.861851 | 7.671584e-64 | -8.615850e-47 |
| Msa0384670 | Msa0662890 | 0.822272 | 2.589258e-53 | -8.615850e-47 |
| Msa0388990 | Msa0662890 | 0.802273 | 6.067159e-49 | -8.615850e-47 |
| Msa0390530 | Msa0662890 | 0.813604 | 2.353262e-51 | -8.615850e-47 |
| Msa0394690 | Msa0662890 | 0.803758 | 2.992071e-49 | -8.615850e-47 |
| Msa0395980 | Msa0662890 | 0.803327 | 3.676019e-49 | -8.615850e-47 |
| Msa0403770 | Msa0662890 | 0.806840 | 6.764189e-50 | -8.615850e-47 |
| Msa0419720 | Msa0662890 | 0.811823 | 5.772212e-51 | -8.615850e-47 |
| Msa0431210 | Msa0662890 | 0.807655 | 4.545264e-50 | -8.615850e-47 |
| Msa0432160 | Msa0662890 | 0.839548 | 1.483579e-57 | -8.615850e-47 |
| Msa0434570 | Msa0662890 | 0.853539 | 2.235174e-61 | -8.615850e-47 |
| Msa0434770 | Msa0662890 | 0.844096 | 9.340653e-59 | -8.615850e-47 |
| Msa0450400 | Msa0662890 | -0.839318 | 1.702459e-57 | -8.615850e-47 |
| Msa0476680 | Msa0662890 | 0.839250 | 1.772667e-57 | -8.615850e-47 |
| Msa0478580 | Msa0662890 | 0.814307 | 1.646967e-51 | -8.615850e-47 |
| Msa0481970 | Msa0662890 | 0.814127 | 1.804895e-51 | -8.615850e-47 |
| Msa0241830 | Msa0662890 | 0.859444 | 4.119837e-63 | -8.615850e-47 |
| Msa0244970 | Msa0662890 | 0.832737 | 7.966974e-56 | -8.615850e-47 |
| Msa0244980 | Msa0662890 | 0.816484 | 5.400788e-52 | -8.615850e-47 |
| Msa0245430 | Msa0662890 | 0.801081 | 1.065590e-48 | -8.615850e-47 |
| Msa0245580 | Msa0662890 | 0.805611 | 1.227602e-49 | -8.615850e-47 |
| Msa0249310 | Msa0662890 | 0.815495 | 8.977928e-52 | -8.615850e-47 |
| Msa0249550 | Msa0662890 | 0.802659 | 5.050981e-49 | -8.615850e-47 |
| Msa0257490 | Msa0662890 | 0.822825 | 1.924996e-53 | -8.615850e-47 |
| Msa0279850 | Msa0662890 | 0.830914 | 2.245049e-55 | -8.615850e-47 |
| Msa0281530 | Msa0662890 | 0.814937 | 1.194550e-51 | -8.615850e-47 |
| Msa0283420 | Msa0662890 | 0.802953 | 4.392126e-49 | -8.615850e-47 |
| Msa0287790 | Msa0662890 | 0.828078 | 1.098135e-54 | -8.615850e-47 |
| Msa0288080 | Msa0662890 | 0.814523 | 1.475014e-51 | -8.615850e-47 |
| Msa0296790 | Msa0662890 | 0.824736 | 6.865470e-54 | -8.615850e-47 |
| Msa0300280 | Msa0662890 | 0.806380 | 8.461780e-50 | -8.615850e-47 |
| Msa0311060 | Msa0662890 | 0.813567 | 2.397356e-51 | -8.615850e-47 |
| Msa0311720 | Msa0662890 | 0.825974 | 3.498603e-54 | -8.615850e-47 |
| Msa0312910 | Msa0662890 | 0.833613 | 4.822786e-56 | -8.615850e-47 |
| Msa0315690 | Msa0662890 | 0.802822 | 4.675626e-49 | -8.615850e-47 |
| Msa0317970 | Msa0662890 | 0.823468 | 1.363156e-53 | -8.615850e-47 |
| Msa0320590 | Msa0662890 | 0.836895 | 7.157402e-57 | -8.615850e-47 |
| Msa0321690 | Msa0662890 | 0.822718 | 2.039153e-53 | -8.615850e-47 |
| Msa0322900 | Msa0662890 | 0.862594 | 4.537837e-64 | -8.615850e-47 |
| Msa0323260 | Msa0662890 | 0.808129 | 3.604574e-50 | -8.615850e-47 |
| Msa0339910 | Msa0662890 | 0.825420 | 4.732426e-54 | -8.615850e-47 |
| Msa0363060 | Msa0662890 | 0.813098 | 3.038920e-51 | -8.615850e-47 |
| Msa0363640 | Msa0662890 | 0.823643 | 1.240440e-53 | -8.615850e-47 |
| Msa0482940 | Msa0662890 | 0.816480 | 5.411360e-52 | -8.615850e-47 |
| Msa0485240 | Msa0662890 | 0.810016 | 1.421378e-50 | -8.615850e-47 |
| Msa0491000 | Msa0662890 | 0.827221 | 1.763486e-54 | -8.615850e-47 |
| Msa0504780 | Msa0662890 | 0.806415 | 8.318309e-50 | -8.615850e-47 |
| Msa0511770 | Msa0662890 | 0.844722 | 6.340984e-59 | -8.615850e-47 |
| Msa0516120 | Msa0662890 | 0.815528 | 8.829631e-52 | -8.615850e-47 |
| Msa0517640 | Msa0662890 | 0.803134 | 4.029128e-49 | -8.615850e-47 |
| Msa0518030 | Msa0662890 | 0.825082 | 5.689433e-54 | -8.615850e-47 |
| Msa0518960 | Msa0662890 | 0.801360 | 9.342164e-49 | -8.615850e-47 |
| Msa0520270 | Msa0662890 | 0.805170 | 1.519417e-49 | -8.615850e-47 |
| Msa0521010 | Msa0662890 | 0.841004 | 6.179824e-58 | -8.615850e-47 |
| Msa0526020 | Msa0662890 | 0.801191 | 1.011795e-48 | -8.615850e-47 |
| Msa0531250 | Msa0662890 | 0.817200 | 3.730171e-52 | -8.615850e-47 |
| Msa0547160 | Msa0662890 | 0.801163 | 1.025139e-48 | -8.615850e-47 |
| Msa0547990 | Msa0662890 | 0.835879 | 1.297300e-56 | -8.615850e-47 |
| Msa0560500 | Msa0662890 | 0.806689 | 7.282358e-50 | -8.615850e-47 |
| Msa0581110 | Msa0662890 | 0.805830 | 1.104730e-49 | -8.615850e-47 |
| Msa0597770 | Msa0662890 | 0.858781 | 6.507437e-63 | -8.615850e-47 |
| Msa0600450 | Msa0662890 | 0.803728 | 3.035789e-49 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0662890 | MtrunA17_Chr2g0294131 | 96.396 | 222 | 8 | 0 | 1 | 222 | 1 | 222 | 7.25e-156 | 431 |
| Msa0662890 | MtrunA17_Chr4g0068671 | 52.439 | 246 | 88 | 7 | 1 | 222 | 1 | 241 | 6.53e-46 | 152 |
| Msa0662890 | MtrunA17_Chr1g0194401 | 46.104 | 154 | 80 | 3 | 51 | 203 | 29 | 180 | 5.33e-36 | 126 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0662890 | AT3G17120.4 | 39.316 | 234 | 104 | 7 | 6 | 220 | 2 | 216 | 3.61e-32 | 117 |
| Msa0662890 | AT3G17120.2 | 39.316 | 234 | 104 | 7 | 6 | 220 | 2 | 216 | 3.61e-32 | 117 |
| Msa0662890 | AT3G17120.1 | 39.316 | 234 | 104 | 7 | 6 | 220 | 2 | 216 | 3.61e-32 | 117 |
| Msa0662890 | AT3G17120.5 | 39.316 | 234 | 104 | 7 | 6 | 220 | 2 | 216 | 3.61e-32 | 117 |
| Msa0662890 | AT3G17120.3 | 39.316 | 234 | 104 | 7 | 6 | 220 | 2 | 216 | 3.61e-32 | 117 |
| Msa0662890 | AT1G02380.1 | 36.957 | 230 | 129 | 9 | 1 | 219 | 1 | 225 | 6.62e-31 | 114 |
| Msa0662890 | AT4G01960.1 | 44.361 | 133 | 66 | 5 | 92 | 222 | 106 | 232 | 2.42e-22 | 91.7 |
| Msa0662890 | AT4G01960.2 | 44.361 | 133 | 66 | 5 | 92 | 222 | 106 | 232 | 2.42e-22 | 91.7 |
| Msa0662890 | AT4G01960.3 | 38.857 | 175 | 86 | 6 | 1 | 159 | 1 | 170 | 7.76e-18 | 79.0 |
Find 90 sgRNAs with CRISPR-Local
Find 230 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GAGAATTTGGATTGGATTTC+TGG | 0.086428 | 4_4:+800396 | Msa0662890:five_prime_UTR |
| ATTGGTTAATATACATAAAA+AGG | 0.151621 | 4_4:-802082 | None:intergenic |
| TATTTCAAGATTCGAAATTA+TGG | 0.194087 | 4_4:-799069 | None:intergenic |
| ATGATTTCTGGTGGATTTCT+TGG | 0.197075 | 4_4:+800517 | Msa0662890:CDS |
| ACTAACAAGGTGGGAGAATT+TGG | 0.197160 | 4_4:+800383 | Msa0662890:five_prime_UTR |
| TTATGTATATTAACCAATAT+TGG | 0.201367 | 4_4:+802087 | Msa0662890:three_prime_UTR |
| TTCCTTTCCCTTCTCTAAAA+AGG | 0.210267 | 4_4:+799226 | Msa0662890:five_prime_UTR |
| CCCTCATTGGATCAATCTTT+AGG | 0.232432 | 4_4:+799202 | Msa0662890:five_prime_UTR |
| AGGAGAATCTCTATGATTTC+TGG | 0.254863 | 4_4:+800505 | Msa0662890:CDS |
| TGGATTGGATTTCTGGTGTT+TGG | 0.257601 | 4_4:+800403 | Msa0662890:five_prime_UTR |
| TATGTATATTAACCAATATT+GGG | 0.260942 | 4_4:+802088 | Msa0662890:three_prime_UTR |
| CCTCATTGGATCAATCTTTA+GGG | 0.265612 | 4_4:+799203 | Msa0662890:five_prime_UTR |
| TGATGGTTTATGATCGATTA+AGG | 0.267940 | 4_4:+800259 | Msa0662890:five_prime_UTR |
| TTTCTTGGAGGTTCTGTTAA+TGG | 0.278154 | 4_4:+800532 | Msa0662890:CDS |
| AACAGAAGAGGGTTTGATTT+CGG | 0.331881 | 4_4:+801595 | Msa0662890:CDS |
| GGATTGGATTTCTGGTGTTT+GGG | 0.341954 | 4_4:+800404 | Msa0662890:five_prime_UTR |
| TATGATGAAAGTGGTGAATA+AGG | 0.354251 | 4_4:+800612 | Msa0662890:CDS |
| AGCAGATCATAAACTAATAA+AGG | 0.356004 | 4_4:+800720 | Msa0662890:CDS |
| GGCGCATTTGAATCACTTGA+TGG | 0.361497 | 4_4:-801635 | None:intergenic |
| TTAATGTTTCTTAATGTGAT+TGG | 0.368070 | 4_4:+802050 | Msa0662890:three_prime_UTR |
| TGTTGCAAGCAGTCATTTGA+TGG | 0.376762 | 4_4:+800242 | Msa0662890:five_prime_UTR |
| TTGTGGAGGTCGCGGAGGTT+TGG | 0.387403 | 4_4:-800680 | None:intergenic |
| GCATATTCTTCAACCCTCAT+TGG | 0.387913 | 4_4:+799189 | Msa0662890:five_prime_UTR |
| TTTGCAGGCATGTCGTCAAC+TGG | 0.390033 | 4_4:+801524 | Msa0662890:intron |
| ATATGCAGAGAGAGAGGTAA+AGG | 0.399380 | 4_4:-799172 | None:intergenic |
| TACTTGATGGACTCCGACCC+TGG | 0.400464 | 4_4:-801656 | None:intergenic |
| TTCTCACTGGCTTGCCAGAT+AGG | 0.401627 | 4_4:+802152 | Msa0662890:three_prime_UTR |
| ATGATTGAAGGTATCTGAAT+CGG | 0.402197 | 4_4:+800206 | Msa0662890:intron |
| CGAATCTTGAAATATTCATA+AGG | 0.407464 | 4_4:+799078 | Msa0662890:five_prime_UTR |
| TGCGTTGTTGTCTTGATTAA+CGG | 0.410720 | 4_4:-799044 | None:intergenic |
| ATTGAAGTTGATATTGAAAG+TGG | 0.415838 | 4_4:+800457 | Msa0662890:CDS |
| TCTGTTCCTCCTGCTGATAC+AGG | 0.426655 | 4_4:-801578 | None:intergenic |
| TGGATTTCTGGTGTTTGGGA+TGG | 0.426787 | 4_4:+800408 | Msa0662890:exon |
| CTTGAGTTATCTTCGATAAG+TGG | 0.433854 | 4_4:-800484 | None:intergenic |
| AGATTTGATTGAGAAAAGAT+AGG | 0.439239 | 4_4:-799020 | None:intergenic |
| ACCTCCACAAGGCCCGTCCT+TGG | 0.439286 | 4_4:+800693 | Msa0662890:CDS |
| ATTTCTGGTGGATTTCTTGG+AGG | 0.445274 | 4_4:+800520 | Msa0662890:CDS |
| TATGCAGAGAGAGAGGTAAA+GGG | 0.446830 | 4_4:-799171 | None:intergenic |
| GAGGTAAAGGGAAAAGAAGA+AGG | 0.455217 | 4_4:-799159 | None:intergenic |
| GATTCATTCAAATAAGAACT+TGG | 0.458751 | 4_4:-800565 | None:intergenic |
| GACGGGCCTTGTGGAGGTCG+CGG | 0.460222 | 4_4:-800688 | None:intergenic |
| TGATTGAAGGTATCTGAATC+GGG | 0.461073 | 4_4:+800207 | Msa0662890:intron |
| ATTGAGAAAAGATAGGAAAG+AGG | 0.469936 | 4_4:-799013 | None:intergenic |
| TTTGGGATGGATCAAAGAAA+TGG | 0.470867 | 4_4:+800421 | Msa0662890:exon |
| TGAAGAATATGCAGAGAGAG+AGG | 0.475557 | 4_4:-799178 | None:intergenic |
| TGATCTGCTGCGTCCAAGGA+CGG | 0.481315 | 4_4:-800706 | None:intergenic |
| TCAAGTGATTCAAATGCGCC+AGG | 0.485179 | 4_4:+801638 | Msa0662890:CDS |
| CAAGGTGGGAGAATTTGGAT+TGG | 0.503439 | 4_4:+800388 | Msa0662890:five_prime_UTR |
| GCGTCCAAGGACGGGCCTTG+TGG | 0.508349 | 4_4:-800697 | None:intergenic |
| GATCTGCTGCGTCCAAGGAC+GGG | 0.514090 | 4_4:-800705 | None:intergenic |
| TTTATGATCTGCTGCGTCCA+AGG | 0.515942 | 4_4:-800710 | None:intergenic |
| ATTCAAATAAGAACTTGGCC+TGG | 0.519471 | 4_4:-800560 | None:intergenic |
| GAGTTTAAGATTTGTTCAAA+AGG | 0.522254 | 4_4:-799106 | None:intergenic |
| CAAGGATCTCCTGTATCAGC+AGG | 0.526670 | 4_4:+801569 | Msa0662890:CDS |
| ATGTATATTAACCAATATTG+GGG | 0.531280 | 4_4:+802089 | Msa0662890:three_prime_UTR |
| CAAGAGTGGTAATTCTGCTA+TGG | 0.535692 | 4_4:-802126 | None:intergenic |
| AGCTCAGTGTCAAGTTTCCA+AGG | 0.545861 | 4_4:+801551 | Msa0662890:CDS |
| TCCAAGGACGGGCCTTGTGG+AGG | 0.547784 | 4_4:-800694 | None:intergenic |
| AGGTAAAGGGAAAAGAAGAA+GGG | 0.553678 | 4_4:-799158 | None:intergenic |
| AAGATAGGAAAGAGGTGTGA+CGG | 0.553834 | 4_4:-799005 | None:intergenic |
| TGTATCTATGACATTACAGT+TGG | 0.557830 | 4_4:-798977 | None:intergenic |
| AGAATCTCTATGATTTCTGG+TGG | 0.557872 | 4_4:+800508 | Msa0662890:CDS |
| TTGTGTATTAAAATATGAGA+TGG | 0.561705 | 4_4:+801972 | Msa0662890:three_prime_UTR |
| TTAGTACATCGTATTAATTG+AGG | 0.561939 | 4_4:+800284 | Msa0662890:five_prime_UTR |
| GTTCTGTTAATGGCGAAGCC+AGG | 0.564549 | 4_4:+800542 | Msa0662890:CDS |
| CCCTAAAGATTGATCCAATG+AGG | 0.566363 | 4_4:-799203 | None:intergenic |
| TTGTAGAGTACTAACAAGGT+GGG | 0.568297 | 4_4:+800374 | Msa0662890:five_prime_UTR |
| CTGCTGATACAGGAGATCCT+TGG | 0.569492 | 4_4:-801568 | None:intergenic |
| TTGCGATGTTGAAGCGTGCA+AGG | 0.575727 | 4_4:+800755 | Msa0662890:CDS |
| TTCTGTGAATATGATGAAAG+TGG | 0.576188 | 4_4:+800603 | Msa0662890:CDS |
| GTACATCGTATTAATTGAGG+AGG | 0.592449 | 4_4:+800287 | Msa0662890:five_prime_UTR |
| TTCATTGTGATAATCTGCCA+AGG | 0.593747 | 4_4:+800880 | Msa0662890:CDS |
| GGATGGATCAAAGAAATGGA+AGG | 0.596860 | 4_4:+800425 | Msa0662890:exon |
| TGATTCAAATGCGCCAGGGT+CGG | 0.597497 | 4_4:+801643 | Msa0662890:CDS |
| TCAGCAGGAGGAACAGAAGA+GGG | 0.604684 | 4_4:+801584 | Msa0662890:CDS |
| ATCAGCAGGAGGAACAGAAG+AGG | 0.608715 | 4_4:+801583 | Msa0662890:CDS |
| ATCTAATAGCAGCAGCATTG+TGG | 0.611367 | 4_4:+800834 | Msa0662890:CDS |
| GGGCCTTGTGGAGGTCGCGG+AGG | 0.611484 | 4_4:-800685 | None:intergenic |
| AAACCTCCGCGACCTCCACA+AGG | 0.611809 | 4_4:+800682 | Msa0662890:CDS |
| AATCACTTGATGGATTGAGT+TGG | 0.614440 | 4_4:-801625 | None:intergenic |
| CCTAAAGATTGATCCAATGA+GGG | 0.615614 | 4_4:-799202 | None:intergenic |
| CACTTATCGAAGATAACTCA+AGG | 0.618096 | 4_4:+800485 | Msa0662890:CDS |
| TGTATATTAACCAATATTGG+GGG | 0.618643 | 4_4:+802090 | Msa0662890:three_prime_UTR |
| CATGGTCGTTGACATTGAGA+TGG | 0.619878 | 4_4:+802214 | Msa0662890:three_prime_UTR |
| ATGCTGCTGCTATTAGATGA+CGG | 0.623369 | 4_4:-800829 | None:intergenic |
| GATGGATCAAAGAAATGGAA+GGG | 0.642676 | 4_4:+800426 | Msa0662890:exon |
| TTTGTAGAGTACTAACAAGG+TGG | 0.646867 | 4_4:+800373 | Msa0662890:five_prime_UTR |
| GTATATTAACCAATATTGGG+GGG | 0.649906 | 4_4:+802091 | Msa0662890:three_prime_UTR |
| CAAGTGATTCAAATGCGCCA+GGG | 0.667412 | 4_4:+801639 | Msa0662890:CDS |
| GGATCTCCTGTATCAGCAGG+AGG | 0.672344 | 4_4:+801572 | Msa0662890:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TTTTTATTATTTGTTTTTTC+TGG | + | chr4_4:799711-799730 | Msa0662890:intron | 10.0% |
| !!! | TTTTATTATTTGTTTTTTCT+GGG | + | chr4_4:799712-799731 | Msa0662890:intron | 10.0% |
| !! | AACAAATTACTAAAAAAAAA+TGG | - | chr4_4:800072-800091 | None:intergenic | 10.0% |
| !!! | ATTAATTTTTTTTCTTTCTG+TGG | + | chr4_4:799515-799534 | Msa0662890:intron | 15.0% |
| !!! | TTCTTATGATTTTAGATTTA+AGG | + | chr4_4:799556-799575 | Msa0662890:intron | 15.0% |
| !! | TTGGTTAATATACATAAAAA+GGG | - | chr4_4:802084-802103 | None:intergenic | 15.0% |
| !! | ATTGGTTAATATACATAAAA+AGG | - | chr4_4:802085-802104 | None:intergenic | 15.0% |
| !! | TTATGTATATTAACCAATAT+TGG | + | chr4_4:802087-802106 | Msa0662890:three_prime_UTR | 15.0% |
| !! | TATGTATATTAACCAATATT+GGG | + | chr4_4:802088-802107 | Msa0662890:three_prime_UTR | 15.0% |
| !! | TATTTCAAGATTCGAAATTA+TGG | - | chr4_4:799072-799091 | None:intergenic | 20.0% |
| !!! | TTTGTCTTTTTTCATTTTCA+TGG | + | chr4_4:799274-799293 | Msa0662890:intron | 20.0% |
| !!! | ATTAATTTTTTTCCTTCTTC+TGG | + | chr4_4:799340-799359 | Msa0662890:intron | 20.0% |
| !!! | TTAATTTTTTTCCTTCTTCT+GGG | + | chr4_4:799341-799360 | Msa0662890:intron | 20.0% |
| !!! | TTGTCTTTTTTCATTTTCAT+GGG | + | chr4_4:799275-799294 | Msa0662890:intron | 20.0% |
| !!! | TTTTGTCACTATTTGAAAAT+TGG | + | chr4_4:799892-799911 | Msa0662890:intron | 20.0% |
| !! | TTTGTCACTATTTGAAAATT+GGG | + | chr4_4:799893-799912 | Msa0662890:intron | 20.0% |
| !!! | ATGATAATTTTCCCTTTAAT+GGG | - | chr4_4:799987-800006 | None:intergenic | 20.0% |
| !!! | TATGATAATTTTCCCTTTAA+TGG | - | chr4_4:799988-800007 | None:intergenic | 20.0% |
| !!! | ATTTGTTTTTAGAGAACTAA+TGG | + | chr4_4:800085-800104 | Msa0662890:intron | 20.0% |
| !! | ATTACTATCAAATTTCATCA+TGG | + | chr4_4:801206-801225 | Msa0662890:intron | 20.0% |
| !!! | AATTTTTTGTATGTTTGGAA+TGG | - | chr4_4:801453-801472 | None:intergenic | 20.0% |
| !! | TTCCAAACATACAAAAAATT+TGG | + | chr4_4:801453-801472 | Msa0662890:intron | 20.0% |
| !!! | AACCAAATTTTTTGTATGTT+TGG | - | chr4_4:801458-801477 | None:intergenic | 20.0% |
| !! | AAACATACAAAAAATTTGGT+TGG | + | chr4_4:801457-801476 | Msa0662890:intron | 20.0% |
| !! | CAACCATTAGATTAATTAAA+TGG | - | chr4_4:801767-801786 | None:intergenic | 20.0% |
| !!! | ATATTTTAATACACAAGTGA+TGG | - | chr4_4:801968-801987 | None:intergenic | 20.0% |
| !! | TTGTGTATTAAAATATGAGA+TGG | + | chr4_4:801972-801991 | Msa0662890:three_prime_UTR | 20.0% |
| !! | TTAATGTTTCTTAATGTGAT+TGG | + | chr4_4:802050-802069 | Msa0662890:three_prime_UTR | 20.0% |
| !! | ATGTATATTAACCAATATTG+GGG | + | chr4_4:802089-802108 | Msa0662890:three_prime_UTR | 20.0% |
| ! | AGATTTGATTGAGAAAAGAT+AGG | - | chr4_4:799023-799042 | None:intergenic | 25.0% |
| ! | CGAATCTTGAAATATTCATA+AGG | + | chr4_4:799078-799097 | Msa0662890:five_prime_UTR | 25.0% |
| !! | GAGTTTAAGATTTGTTCAAA+AGG | - | chr4_4:799109-799128 | None:intergenic | 25.0% |
| !!! | GTAATTACCTTTTTAGAGAA+GGG | - | chr4_4:799236-799255 | None:intergenic | 25.0% |
| !!! | AGTAATTACCTTTTTAGAGA+AGG | - | chr4_4:799237-799256 | None:intergenic | 25.0% |
| !!! | TAATTTTTTTCCTTCTTCTG+GGG | + | chr4_4:799342-799361 | Msa0662890:intron | 25.0% |
| !!! | GTTGTCTTTTTTCATTTTCA+TGG | + | chr4_4:799644-799663 | Msa0662890:intron | 25.0% |
| ! | TTGTCACTATTTGAAAATTG+GGG | + | chr4_4:799894-799913 | Msa0662890:intron | 25.0% |
| ! | AAGCTTAAAGTTATGTCATT+TGG | + | chr4_4:799926-799945 | Msa0662890:intron | 25.0% |
| ! | CAAAGATAAAACCCATTAAA+GGG | + | chr4_4:799973-799992 | Msa0662890:intron | 25.0% |
| ! | AAATGGTATAATCCTTTGAA+AGG | - | chr4_4:800055-800074 | None:intergenic | 25.0% |
| !!! | TAGTAAATAGAGTTTTAGAG+AGG | + | chr4_4:800114-800133 | Msa0662890:intron | 25.0% |
| ! | TTAGTACATCGTATTAATTG+AGG | + | chr4_4:800284-800303 | Msa0662890:five_prime_UTR | 25.0% |
| !!! | AGGAGGTTTTTTTATATGAT+GGG | + | chr4_4:800304-800323 | Msa0662890:five_prime_UTR | 25.0% |
| !!! | ATTGAAGTTGATATTGAAAG+TGG | + | chr4_4:800457-800476 | Msa0662890:CDS | 25.0% |
| ! | GATTCATTCAAATAAGAACT+TGG | - | chr4_4:800568-800587 | None:intergenic | 25.0% |
| ! | AGCAGATCATAAACTAATAA+AGG | + | chr4_4:800720-800739 | Msa0662890:CDS | 25.0% |
| !! | AATTTTATATGGCCTAATAG+AGG | - | chr4_4:801052-801071 | None:intergenic | 25.0% |
| ! | TCGCCATTTAATTAATCTAA+TGG | + | chr4_4:801761-801780 | Msa0662890:intron | 25.0% |
| ! | TGTATATTAACCAATATTGG+GGG | + | chr4_4:802090-802109 | Msa0662890:three_prime_UTR | 25.0% |
| !!! | CTTTTGAAGCTAAAAAACAA+TGG | + | chr4_4:802245-802264 | Msa0662890:three_prime_UTR | 25.0% |
| TGTATCTATGACATTACAGT+TGG | - | chr4_4:798980-798999 | None:intergenic | 30.0% | |
| ATTGAGAAAAGATAGGAAAG+AGG | - | chr4_4:799016-799035 | None:intergenic | 30.0% | |
| AACCCTCAAATGATGATAAT+GGG | - | chr4_4:799303-799322 | None:intergenic | 30.0% | |
| TAACCCTCAAATGATGATAA+TGG | - | chr4_4:799304-799323 | None:intergenic | 30.0% | |
| ! | TTGCCTTTTTCCATTTTCAT+GGG | + | chr4_4:799436-799455 | Msa0662890:intron | 30.0% |
| ATACCCCAAATGAAGATAAT+GGG | - | chr4_4:799464-799483 | None:intergenic | 30.0% | |
| AATACCCCAAATGAAGATAA+TGG | - | chr4_4:799465-799484 | None:intergenic | 30.0% | |
| ! | TATTTGAAAATTGGGGCTTT+TGG | + | chr4_4:799901-799920 | Msa0662890:intron | 30.0% |
| ! | ATTTGAAAATTGGGGCTTTT+GGG | + | chr4_4:799902-799921 | Msa0662890:intron | 30.0% |
| !!! | TTAATGGGTTTTATCTTTGG+AGG | - | chr4_4:799972-799991 | None:intergenic | 30.0% |
| !!! | CCTTTAATGGGTTTTATCTT+TGG | - | chr4_4:799975-799994 | None:intergenic | 30.0% |
| CCAAAGATAAAACCCATTAA+AGG | + | chr4_4:799972-799991 | Msa0662890:intron | 30.0% | |
| !!! | TGTTTTTAGAGAACTAATGG+AGG | + | chr4_4:800088-800107 | Msa0662890:intron | 30.0% |
| !! | ATGATTGAAGGTATCTGAAT+CGG | + | chr4_4:800206-800225 | Msa0662890:intron | 30.0% |
| TGATGGTTTATGATCGATTA+AGG | + | chr4_4:800259-800278 | Msa0662890:five_prime_UTR | 30.0% | |
| !!! | GAGGAGGTTTTTTTATATGA+TGG | + | chr4_4:800303-800322 | Msa0662890:five_prime_UTR | 30.0% |
| !! | GTTTTTGTAGAGTACTAACA+AGG | + | chr4_4:800370-800389 | Msa0662890:five_prime_UTR | 30.0% |
| TTCTGTGAATATGATGAAAG+TGG | + | chr4_4:800603-800622 | Msa0662890:CDS | 30.0% | |
| TATGATGAAAGTGGTGAATA+AGG | + | chr4_4:800612-800631 | Msa0662890:CDS | 30.0% | |
| !! | TTTTTCCGTTTTTCTTTTGC+TGG | - | chr4_4:800640-800659 | None:intergenic | 30.0% |
| AGCAAAAGAAAAACGGAAAA+AGG | + | chr4_4:800639-800658 | Msa0662890:CDS | 30.0% | |
| ! | TTGTACCACAAATTTTACCT+TGG | - | chr4_4:800900-800919 | None:intergenic | 30.0% |
| GAAACAGATTAGATATGCAA+TGG | - | chr4_4:801030-801049 | None:intergenic | 30.0% | |
| TCTAATCTGTTTCCTCTATT+AGG | + | chr4_4:801037-801056 | Msa0662890:intron | 30.0% | |
| AGAAATGCCAAAGAAACAAT+TGG | - | chr4_4:801237-801256 | None:intergenic | 30.0% | |
| !!! | AGTTTTGTTGCATTCATGAT+TGG | + | chr4_4:801268-801287 | Msa0662890:intron | 30.0% |
| !!! | GTTTGTTTTTGTGCAATGTT+TGG | + | chr4_4:801314-801333 | Msa0662890:intron | 30.0% |
| !! | TTTTTGTATGTTTGGAATGG+CGG | - | chr4_4:801450-801469 | None:intergenic | 30.0% |
| ! | TAATTAGAAGTTCCTTTTGC+AGG | + | chr4_4:801509-801528 | Msa0662890:intron | 30.0% |
| ! | TGTGTTTTCAACTTACTTGA+TGG | - | chr4_4:801672-801691 | None:intergenic | 30.0% |
| GATCAATATCACAACACTAA+GGG | - | chr4_4:801714-801733 | None:intergenic | 30.0% | |
| GTATATTAACCAATATTGGG+GGG | + | chr4_4:802091-802110 | Msa0662890:three_prime_UTR | 30.0% | |
| TGAGAAGGTAAAAAGTAACA+GGG | - | chr4_4:802178-802197 | None:intergenic | 30.0% | |
| TGCGTTGTTGTCTTGATTAA+CGG | - | chr4_4:799047-799066 | None:intergenic | 35.0% | |
| AGGTAAAGGGAAAAGAAGAA+GGG | - | chr4_4:799161-799180 | None:intergenic | 35.0% | |
| CCTAAAGATTGATCCAATGA+GGG | - | chr4_4:799205-799224 | None:intergenic | 35.0% | |
| CCTCATTGGATCAATCTTTA+GGG | + | chr4_4:799203-799222 | Msa0662890:five_prime_UTR | 35.0% | |
| ! | TTCCTTTCCCTTCTCTAAAA+AGG | + | chr4_4:799226-799245 | Msa0662890:five_prime_UTR | 35.0% |
| !! | TACCTTTTTAGAGAAGGGAA+AGG | - | chr4_4:799231-799250 | None:intergenic | 35.0% |
| TTGCCCATTATCATCATTTG+AGG | + | chr4_4:799297-799316 | Msa0662890:intron | 35.0% | |
| TGCCCATTATCATCATTTGA+GGG | + | chr4_4:799298-799317 | Msa0662890:intron | 35.0% | |
| TATCATCATTTGAGGGTTAG+AGG | + | chr4_4:799305-799324 | Msa0662890:intron | 35.0% | |
| AATTATTCAACCCCAGAAGA+AGG | - | chr4_4:799355-799374 | None:intergenic | 35.0% | |
| ! | GTTGCCTTTTTCCATTTTCA+TGG | + | chr4_4:799435-799454 | Msa0662890:intron | 35.0% |
| !! | ATTTGGGGTATTGACTTTGA+GGG | + | chr4_4:799473-799492 | Msa0662890:intron | 35.0% |
| !! | TACCCCCAAATTTTGATGAT+GGG | - | chr4_4:799673-799692 | None:intergenic | 35.0% |
| !! | ATACCCCCAAATTTTGATGA+TGG | - | chr4_4:799674-799693 | None:intergenic | 35.0% |
| !! | AATTTGGGGGTATTGACTTT+AGG | + | chr4_4:799681-799700 | Msa0662890:intron | 35.0% |
| !! | ATTTGGGGGTATTGACTTTA+GGG | + | chr4_4:799682-799701 | Msa0662890:intron | 35.0% |
| CAAAGCAATGCAGACATAAA+TGG | - | chr4_4:799807-799826 | None:intergenic | 35.0% | |
| TCTTTGTTCCTTTCTTCTCA+AGG | + | chr4_4:799852-799871 | Msa0662890:intron | 35.0% | |
| CAAAAAGTCCTTGAGAAGAA+AGG | - | chr4_4:799863-799882 | None:intergenic | 35.0% | |
| !! | TGATTGAAGGTATCTGAATC+GGG | + | chr4_4:800207-800226 | Msa0662890:intron | 35.0% |
| GTACATCGTATTAATTGAGG+AGG | + | chr4_4:800287-800306 | Msa0662890:five_prime_UTR | 35.0% | |
| ! | TTTGTAGAGTACTAACAAGG+TGG | + | chr4_4:800373-800392 | Msa0662890:five_prime_UTR | 35.0% |
| ! | TTGTAGAGTACTAACAAGGT+GGG | + | chr4_4:800374-800393 | Msa0662890:five_prime_UTR | 35.0% |
| ! | GAGAATTTGGATTGGATTTC+TGG | + | chr4_4:800396-800415 | Msa0662890:five_prime_UTR | 35.0% |
| ! | TTTGGGATGGATCAAAGAAA+TGG | + | chr4_4:800421-800440 | Msa0662890:exon | 35.0% |
| GATGGATCAAAGAAATGGAA+GGG | + | chr4_4:800426-800445 | Msa0662890:exon | 35.0% | |
| CTTGAGTTATCTTCGATAAG+TGG | - | chr4_4:800487-800506 | None:intergenic | 35.0% | |
| CACTTATCGAAGATAACTCA+AGG | + | chr4_4:800485-800504 | Msa0662890:CDS | 35.0% | |
| AGGAGAATCTCTATGATTTC+TGG | + | chr4_4:800505-800524 | Msa0662890:CDS | 35.0% | |
| ! | AGAATCTCTATGATTTCTGG+TGG | + | chr4_4:800508-800527 | Msa0662890:CDS | 35.0% |
| !! | ATGATTTCTGGTGGATTTCT+TGG | + | chr4_4:800517-800536 | Msa0662890:CDS | 35.0% |
| TTTCTTGGAGGTTCTGTTAA+TGG | + | chr4_4:800532-800551 | Msa0662890:CDS | 35.0% | |
| ATTCAAATAAGAACTTGGCC+TGG | - | chr4_4:800563-800582 | None:intergenic | 35.0% | |
| TTCATTGTGATAATCTGCCA+AGG | + | chr4_4:800880-800899 | Msa0662890:CDS | 35.0% | |
| ATCTGCCAAGGTAAAATTTG+TGG | + | chr4_4:800892-800911 | Msa0662890:intron | 35.0% | |
| TATGCAATGGTCACAAAACA+AGG | - | chr4_4:801017-801036 | None:intergenic | 35.0% | |
| ! | GGTTTGTCCAATTGTTTCTT+TGG | + | chr4_4:801227-801246 | Msa0662890:intron | 35.0% |
| GTTTCTTTGGCATTTCTTTC+TGG | + | chr4_4:801240-801259 | Msa0662890:intron | 35.0% | |
| CAAAAACAAACAATACCGCA+GGG | - | chr4_4:801305-801324 | None:intergenic | 35.0% | |
| ACAAAAACAAACAATACCGC+AGG | - | chr4_4:801306-801325 | None:intergenic | 35.0% | |
| TTGTGCAATGTTTGGATTGA+CGG | + | chr4_4:801322-801341 | Msa0662890:intron | 35.0% | |
| !! | CGGAGATTTTAGAGATATCA+CGG | + | chr4_4:801342-801361 | Msa0662890:intron | 35.0% |
| !! | AGATTTTAGAGATATCACGG+TGG | + | chr4_4:801345-801364 | Msa0662890:intron | 35.0% |
| TTCCATCATAAGCTACACTT+TGG | - | chr4_4:801392-801411 | None:intergenic | 35.0% | |
| ! | AACAGAAGAGGGTTTGATTT+CGG | + | chr4_4:801595-801614 | Msa0662890:CDS | 35.0% |
| !! | AATCACTTGATGGATTGAGT+TGG | - | chr4_4:801628-801647 | None:intergenic | 35.0% |
| GGATCAATATCACAACACTA+AGG | - | chr4_4:801715-801734 | None:intergenic | 35.0% | |
| TAATGGTTGAAATTTCGCGA+GGG | + | chr4_4:801778-801797 | Msa0662890:intron | 35.0% | |
| ! | ATGTGAAATTTTCCGCTTGA+TGG | + | chr4_4:801845-801864 | Msa0662890:intron | 35.0% |
| CTGAGAAGGTAAAAAGTAAC+AGG | - | chr4_4:802179-802198 | None:intergenic | 35.0% | |
| ! | AAGATAGGAAAGAGGTGTGA+CGG | - | chr4_4:799008-799027 | None:intergenic | 40.0% |
| GAGGTAAAGGGAAAAGAAGA+AGG | - | chr4_4:799162-799181 | None:intergenic | 40.0% | |
| TATGCAGAGAGAGAGGTAAA+GGG | - | chr4_4:799174-799193 | None:intergenic | 40.0% | |
| ATATGCAGAGAGAGAGGTAA+AGG | - | chr4_4:799175-799194 | None:intergenic | 40.0% | |
| TGAAGAATATGCAGAGAGAG+AGG | - | chr4_4:799181-799200 | None:intergenic | 40.0% | |
| GCATATTCTTCAACCCTCAT+TGG | + | chr4_4:799189-799208 | Msa0662890:five_prime_UTR | 40.0% | |
| CCCTCATTGGATCAATCTTT+AGG | + | chr4_4:799202-799221 | Msa0662890:five_prime_UTR | 40.0% | |
| CCCTAAAGATTGATCCAATG+AGG | - | chr4_4:799206-799225 | None:intergenic | 40.0% | |
| GCACCCATGAAAATGGAAAA+AGG | - | chr4_4:799442-799461 | None:intergenic | 40.0% | |
| !! | ATAATGGGCACCCATGAAAA+TGG | - | chr4_4:799449-799468 | None:intergenic | 40.0% |
| GGTGCCCATTATCTTCATTT+GGG | + | chr4_4:799457-799476 | Msa0662890:intron | 40.0% | |
| GTGCCCATTATCTTCATTTG+GGG | + | chr4_4:799458-799477 | Msa0662890:intron | 40.0% | |
| !! | CATTTGGGGTATTGACTTTG+AGG | + | chr4_4:799472-799491 | Msa0662890:intron | 40.0% |
| !! | GTATTGACTTTGAGGGTTAG+AGG | + | chr4_4:799480-799499 | Msa0662890:intron | 40.0% |
| GGTGCCCATCATCAAAATTT+GGG | + | chr4_4:799666-799685 | Msa0662890:intron | 40.0% | |
| GTGCCCATCATCAAAATTTG+GGG | + | chr4_4:799667-799686 | Msa0662890:intron | 40.0% | |
| TGCCCATCATCAAAATTTGG+GGG | + | chr4_4:799668-799687 | Msa0662890:intron | 40.0% | |
| !!! | TTCGTCACTTTTTGTGATGC+AGG | + | chr4_4:800023-800042 | Msa0662890:intron | 40.0% |
| TGCAGGTTTAGTCCTTTCAA+AGG | + | chr4_4:800040-800059 | Msa0662890:intron | 40.0% | |
| ! | GAGAGGAAGAGAAGTAGTTT+TGG | + | chr4_4:800131-800150 | Msa0662890:intron | 40.0% |
| !!! | AGGAAGAGAAGTAGTTTTGG+AGG | + | chr4_4:800134-800153 | Msa0662890:intron | 40.0% |
| CGTGGATGGTTTATGATTGA+AGG | + | chr4_4:800194-800213 | Msa0662890:intron | 40.0% | |
| TGTTGCAAGCAGTCATTTGA+TGG | + | chr4_4:800242-800261 | Msa0662890:five_prime_UTR | 40.0% | |
| ACTAACAAGGTGGGAGAATT+TGG | + | chr4_4:800383-800402 | Msa0662890:five_prime_UTR | 40.0% | |
| !! | TGGATTGGATTTCTGGTGTT+TGG | + | chr4_4:800403-800422 | Msa0662890:five_prime_UTR | 40.0% |
| !! | GGATTGGATTTCTGGTGTTT+GGG | + | chr4_4:800404-800423 | Msa0662890:five_prime_UTR | 40.0% |
| GGATGGATCAAAGAAATGGA+AGG | + | chr4_4:800425-800444 | Msa0662890:exon | 40.0% | |
| !! | ATTTCTGGTGGATTTCTTGG+AGG | + | chr4_4:800520-800539 | Msa0662890:CDS | 40.0% |
| AGGCTCCAGCAAAAGAAAAA+CGG | + | chr4_4:800632-800651 | Msa0662890:CDS | 40.0% | |
| ! | AGAAAAACGGAAAAAGGCGT+CGG | + | chr4_4:800645-800664 | Msa0662890:CDS | 40.0% |
| ATGCTGCTGCTATTAGATGA+CGG | - | chr4_4:800832-800851 | None:intergenic | 40.0% | |
| ATCTAATAGCAGCAGCATTG+TGG | + | chr4_4:800834-800853 | Msa0662890:CDS | 40.0% | |
| AGTGAGTACACGAGAAATCA+TGG | + | chr4_4:801113-801132 | Msa0662890:intron | 40.0% | |
| GTGAGTACACGAGAAATCAT+GGG | + | chr4_4:801114-801133 | Msa0662890:intron | 40.0% | |
| TACACGAGAAATCATGGGTT+TGG | + | chr4_4:801119-801138 | Msa0662890:intron | 40.0% | |
| ! | GAGAAATCATGGGTTTGGTT+TGG | + | chr4_4:801124-801143 | Msa0662890:intron | 40.0% |
| TTGGATTAAACTACTCCCTG+CGG | + | chr4_4:801287-801306 | Msa0662890:intron | 40.0% | |
| CTCCAAAGTGTAGCTTATGA+TGG | + | chr4_4:801387-801406 | Msa0662890:intron | 40.0% | |
| ! | AGCTTATGATGGAATCACGA+TGG | + | chr4_4:801398-801417 | Msa0662890:intron | 40.0% |
| ! | TATCTCGTAGTGGGATTCAA+AGG | - | chr4_4:801736-801755 | None:intergenic | 40.0% |
| CTAATGGTTGAAATTTCGCG+AGG | + | chr4_4:801777-801796 | Msa0662890:intron | 40.0% | |
| AATGGTTGAAATTTCGCGAG+GGG | + | chr4_4:801779-801798 | Msa0662890:intron | 40.0% | |
| ACAAAACTGCAACCATCAAG+CGG | - | chr4_4:801860-801879 | None:intergenic | 40.0% | |
| !! | ATGGTTGCAGTTTTGTACAG+CGG | + | chr4_4:801864-801883 | Msa0662890:intron | 40.0% |
| CAGATTCGCAAGAAAAACTG+AGG | + | chr4_4:801897-801916 | Msa0662890:CDS | 40.0% | |
| TTTAACTCACCCCCCAATAT+TGG | - | chr4_4:802103-802122 | None:intergenic | 40.0% | |
| CAAGAGTGGTAATTCTGCTA+TGG | - | chr4_4:802129-802148 | None:intergenic | 40.0% | |
| !!! | ACCACTCTTGTTTTTCTCAC+TGG | + | chr4_4:802139-802158 | Msa0662890:three_prime_UTR | 40.0% |
| AAAAAGTAACAGGGCCTATC+TGG | - | chr4_4:802169-802188 | None:intergenic | 40.0% | |
| GCAACAAAAAGTTGCTGAGA+AGG | - | chr4_4:802193-802212 | None:intergenic | 40.0% | |
| ! | CAGCAACTTTTTGTTGCTCA+TGG | + | chr4_4:802196-802215 | Msa0662890:three_prime_UTR | 40.0% |
| GGGTGCCCATTATCTTCATT+TGG | + | chr4_4:799456-799475 | Msa0662890:intron | 45.0% | |
| GGGTGCCCATCATCAAAATT+TGG | + | chr4_4:799665-799684 | Msa0662890:intron | 45.0% | |
| CTGTCTGTATCTGTCTAACG+TGG | + | chr4_4:800176-800195 | Msa0662890:intron | 45.0% | |
| CTGTATCTGTCTAACGTGGA+TGG | + | chr4_4:800180-800199 | Msa0662890:intron | 45.0% | |
| CAAGGTGGGAGAATTTGGAT+TGG | + | chr4_4:800388-800407 | Msa0662890:five_prime_UTR | 45.0% | |
| !! | TGGATTTCTGGTGTTTGGGA+TGG | + | chr4_4:800408-800427 | Msa0662890:exon | 45.0% |
| !! | GAAAAACGGAAAAAGGCGTC+GGG | + | chr4_4:800646-800665 | Msa0662890:CDS | 45.0% |
| !! | GAAAAAGGCGTCGGGTAAAA+AGG | + | chr4_4:800654-800673 | Msa0662890:CDS | 45.0% |
| TTTATGATCTGCTGCGTCCA+AGG | - | chr4_4:800713-800732 | None:intergenic | 45.0% | |
| AGCTCAGTGTCAAGTTTCCA+AGG | + | chr4_4:801551-801570 | Msa0662890:CDS | 45.0% | |
| GGCGCATTTGAATCACTTGA+TGG | - | chr4_4:801638-801657 | None:intergenic | 45.0% | |
| TCAAGTGATTCAAATGCGCC+AGG | + | chr4_4:801638-801657 | Msa0662890:CDS | 45.0% | |
| CAAGTGATTCAAATGCGCCA+GGG | + | chr4_4:801639-801658 | Msa0662890:CDS | 45.0% | |
| ! | GCGAAGTGTTATCTCGTAGT+GGG | - | chr4_4:801745-801764 | None:intergenic | 45.0% |
| AATTTCGCGAGGGGATAAAG+AGG | + | chr4_4:801788-801807 | Msa0662890:intron | 45.0% | |
| !! | TGGTTGCAGTTTTGTACAGC+GGG | + | chr4_4:801865-801884 | Msa0662890:intron | 45.0% |
| TCGCAAGAAAAACTGAGGAC+AGG | + | chr4_4:801902-801921 | Msa0662890:CDS | 45.0% | |
| GAAAAACTGAGGACAGGTTG+AGG | + | chr4_4:801908-801927 | Msa0662890:CDS | 45.0% | |
| GCCAGTGAGAAAAACAAGAG+TGG | - | chr4_4:802143-802162 | None:intergenic | 45.0% | |
| CATGGTCGTTGACATTGAGA+TGG | + | chr4_4:802214-802233 | Msa0662890:three_prime_UTR | 45.0% | |
| !!! | ATAAATATGAAAATTTTATA+TGG | - | chr4_4:801063-801082 | None:intergenic | 5.0% |
| GTTCTGTTAATGGCGAAGCC+AGG | + | chr4_4:800542-800561 | Msa0662890:CDS | 50.0% | |
| TTGCGATGTTGAAGCGTGCA+AGG | + | chr4_4:800755-800774 | Msa0662890:CDS | 50.0% | |
| ! | GTTTGGAATGGCGGTGAGTT+TGG | - | chr4_4:801441-801460 | None:intergenic | 50.0% |
| GTTGACGACATGCCTGCAAA+AGG | - | chr4_4:801524-801543 | None:intergenic | 50.0% | |
| TTTGCAGGCATGTCGTCAAC+TGG | + | chr4_4:801524-801543 | Msa0662890:intron | 50.0% | |
| CTGCTGATACAGGAGATCCT+TGG | - | chr4_4:801571-801590 | None:intergenic | 50.0% | |
| CAAGGATCTCCTGTATCAGC+AGG | + | chr4_4:801569-801588 | Msa0662890:CDS | 50.0% | |
| TCTGTTCCTCCTGCTGATAC+AGG | - | chr4_4:801581-801600 | None:intergenic | 50.0% | |
| ATCAGCAGGAGGAACAGAAG+AGG | + | chr4_4:801583-801602 | Msa0662890:CDS | 50.0% | |
| TCAGCAGGAGGAACAGAAGA+GGG | + | chr4_4:801584-801603 | Msa0662890:CDS | 50.0% | |
| TGATTCAAATGCGCCAGGGT+CGG | + | chr4_4:801643-801662 | Msa0662890:CDS | 50.0% | |
| ! | GGCGAAGTGTTATCTCGTAG+TGG | - | chr4_4:801746-801765 | None:intergenic | 50.0% |
| !! | AGTTTTGTACAGCGGGTGTC+AGG | + | chr4_4:801872-801891 | Msa0662890:intron | 50.0% |
| !! | TTCTCACTGGCTTGCCAGAT+AGG | + | chr4_4:802152-802171 | Msa0662890:three_prime_UTR | 50.0% |
| TGATCTGCTGCGTCCAAGGA+CGG | - | chr4_4:800709-800728 | None:intergenic | 55.0% | |
| GGATCTCCTGTATCAGCAGG+AGG | + | chr4_4:801572-801591 | Msa0662890:CDS | 55.0% | |
| !! | TACTTGATGGACTCCGACCC+TGG | - | chr4_4:801659-801678 | None:intergenic | 55.0% |
| TTGTGGAGGTCGCGGAGGTT+TGG | - | chr4_4:800683-800702 | None:intergenic | 60.0% | |
| AAACCTCCGCGACCTCCACA+AGG | + | chr4_4:800682-800701 | Msa0662890:CDS | 60.0% | |
| GATCTGCTGCGTCCAAGGAC+GGG | - | chr4_4:800708-800727 | None:intergenic | 60.0% | |
| ACCTCCACAAGGCCCGTCCT+TGG | + | chr4_4:800693-800712 | Msa0662890:CDS | 65.0% | |
| ! | TCCAAGGACGGGCCTTGTGG+AGG | - | chr4_4:800697-800716 | None:intergenic | 65.0% |
| ! | GACGGGCCTTGTGGAGGTCG+CGG | - | chr4_4:800691-800710 | None:intergenic | 70.0% |
| GCGTCCAAGGACGGGCCTTG+TGG | - | chr4_4:800700-800719 | None:intergenic | 70.0% | |
| ! | GGGCCTTGTGGAGGTCGCGG+AGG | - | chr4_4:800688-800707 | None:intergenic | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4_4 | gene | 798965 | 802293 | 798965 | ID=Msa0662890;Name=Msa0662890 |
| chr4_4 | mRNA | 798965 | 802293 | 798965 | ID=Msa0662890-mRNA-1;Parent=Msa0662890;Name=Msa0662890-mRNA-1;_AED=0.13;_eAED=0.13;_QI=494|1|1|1|0.66|0.75|4|365|224 |
| chr4_4 | exon | 798965 | 799247 | 798965 | ID=Msa0662890-mRNA-1:exon:349;Parent=Msa0662890-mRNA-1 |
| chr4_4 | exon | 800216 | 800901 | 800216 | ID=Msa0662890-mRNA-1:exon:350;Parent=Msa0662890-mRNA-1 |
| chr4_4 | exon | 801531 | 801675 | 801531 | ID=Msa0662890-mRNA-1:exon:351;Parent=Msa0662890-mRNA-1 |
| chr4_4 | exon | 801874 | 802293 | 801874 | ID=Msa0662890-mRNA-1:exon:352;Parent=Msa0662890-mRNA-1 |
| chr4_4 | five_prime_UTR | 798965 | 799247 | 798965 | ID=Msa0662890-mRNA-1:five_prime_utr;Parent=Msa0662890-mRNA-1 |
| chr4_4 | five_prime_UTR | 800216 | 800426 | 800216 | ID=Msa0662890-mRNA-1:five_prime_utr;Parent=Msa0662890-mRNA-1 |
| chr4_4 | CDS | 800427 | 800901 | 800427 | ID=Msa0662890-mRNA-1:cds;Parent=Msa0662890-mRNA-1 |
| chr4_4 | CDS | 801531 | 801675 | 801531 | ID=Msa0662890-mRNA-1:cds;Parent=Msa0662890-mRNA-1 |
| chr4_4 | CDS | 801874 | 801928 | 801874 | ID=Msa0662890-mRNA-1:cds;Parent=Msa0662890-mRNA-1 |
| chr4_4 | three_prime_UTR | 801929 | 802293 | 801929 | ID=Msa0662890-mRNA-1:three_prime_utr;Parent=Msa0662890-mRNA-1 |
| Gene Sequence |
| Protein sequence |
