Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0789830 | AZZ09409.1 | 99.783 | 461 | 1 | 0 | 1 | 461 | 1 | 461 | 0.0 | 949 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0789830 | sp|A0A0M4FMK2|RAM1_PETHY | 33.487 | 433 | 231 | 17 | 50 | 459 | 296 | 694 | 3.77e-65 | 225 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0789830 | A0A678ZVZ1 | 99.783 | 461 | 1 | 0 | 1 | 461 | 1 | 461 | 0.0 | 949 |
| Gene ID | Type | Classification |
|---|---|---|
| Msa0789830 | TF | GRAS |
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0000190 | Msa0789830 | 0.801083 | 1.064237e-48 | -8.615850e-47 |
| Msa0024550 | Msa0789830 | 0.834471 | 2.940857e-56 | -8.615850e-47 |
| Msa0112570 | Msa0789830 | 0.808796 | 2.596953e-50 | -8.615850e-47 |
| Msa0120400 | Msa0789830 | 0.837733 | 4.366850e-57 | -8.615850e-47 |
| Msa0727930 | Msa0789830 | 0.808926 | 2.435992e-50 | -8.615850e-47 |
| Msa0769180 | Msa0789830 | 0.828276 | 9.835964e-55 | -8.615850e-47 |
| Msa0789830 | Msa0816150 | 0.805274 | 1.444591e-49 | -8.615850e-47 |
| Msa0789830 | Msa0876560 | 0.824782 | 6.699139e-54 | -8.615850e-47 |
| Msa0789830 | Msa0967380 | 0.822272 | 2.588166e-53 | -8.615850e-47 |
| Msa0789830 | Msa1125810 | 0.802880 | 4.546751e-49 | -8.615850e-47 |
| Msa0164330 | Msa0789830 | 0.805916 | 1.059618e-49 | -8.615850e-47 |
| Msa0197100 | Msa0789830 | 0.810396 | 1.176751e-50 | -8.615850e-47 |
| Msa0378720 | Msa0789830 | 0.801289 | 9.659651e-49 | -8.615850e-47 |
| Msa0385390 | Msa0789830 | 0.810943 | 8.962709e-51 | -8.615850e-47 |
| Msa0415320 | Msa0789830 | 0.839662 | 1.385585e-57 | -8.615850e-47 |
| Msa0239030 | Msa0789830 | 0.823585 | 1.279411e-53 | -8.615850e-47 |
| Msa0276740 | Msa0789830 | 0.809166 | 2.164549e-50 | -8.615850e-47 |
| Msa0316680 | Msa0789830 | 0.813639 | 2.312068e-51 | -8.615850e-47 |
| Msa0523000 | Msa0789830 | 0.816849 | 4.473471e-52 | -8.615850e-47 |
| Msa0591790 | Msa0789830 | 0.840667 | 7.573852e-58 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0789830 | MtrunA17_Chr1g0200401 | 98.698 | 461 | 6 | 0 | 1 | 461 | 1 | 461 | 0.0 | 941 |
| Msa0789830 | MtrunA17_Chr7g0224271 | 33.898 | 413 | 221 | 14 | 70 | 459 | 290 | 673 | 7.67e-64 | 218 |
| Msa0789830 | MtrunA17_Chr2g0306641 | 31.553 | 412 | 229 | 15 | 68 | 461 | 113 | 489 | 1.10e-54 | 190 |
| Msa0789830 | MtrunA17_Chr8g0376381 | 31.910 | 398 | 221 | 16 | 74 | 459 | 163 | 522 | 1.71e-53 | 187 |
| Msa0789830 | MtrunA17_Chr7g0245601 | 32.718 | 379 | 222 | 10 | 85 | 459 | 443 | 792 | 2.82e-52 | 188 |
| Msa0789830 | MtrunA17_Chr4g0057291 | 32.426 | 404 | 232 | 13 | 74 | 461 | 286 | 664 | 6.18e-52 | 186 |
| Msa0789830 | MtrunA17_Chr3g0110971 | 31.463 | 410 | 222 | 15 | 74 | 459 | 213 | 587 | 2.89e-50 | 180 |
| Msa0789830 | MtrunA17_Chr5g0447691 | 31.207 | 439 | 253 | 15 | 38 | 459 | 138 | 544 | 8.36e-49 | 175 |
| Msa0789830 | MtrunA17_Chr4g0038761 | 31.783 | 387 | 219 | 11 | 85 | 459 | 89 | 442 | 1.80e-47 | 169 |
| Msa0789830 | MtrunA17_Chr3g0125811 | 28.967 | 397 | 238 | 12 | 79 | 459 | 202 | 570 | 1.76e-45 | 166 |
| Msa0789830 | MtrunA17_Chr1g0159461 | 29.723 | 397 | 235 | 12 | 79 | 459 | 224 | 592 | 2.63e-45 | 166 |
| Msa0789830 | MtrunA17_Chr5g0445331 | 29.064 | 406 | 234 | 14 | 77 | 459 | 158 | 532 | 7.24e-45 | 164 |
| Msa0789830 | MtrunA17_Chr4g0057891 | 29.782 | 413 | 234 | 15 | 72 | 460 | 141 | 521 | 8.45e-45 | 164 |
| Msa0789830 | MtrunA17_Chr4g0039661 | 32.161 | 398 | 225 | 13 | 76 | 459 | 189 | 555 | 2.05e-43 | 160 |
| Msa0789830 | MtrunA17_Chr3g0101141 | 28.894 | 398 | 241 | 13 | 77 | 459 | 172 | 542 | 2.38e-43 | 160 |
| Msa0789830 | MtrunA17_Chr1g0183641 | 30.576 | 399 | 232 | 15 | 70 | 458 | 113 | 476 | 2.17e-42 | 156 |
| Msa0789830 | MtrunA17_Chr4g0076091 | 30.348 | 402 | 233 | 15 | 75 | 458 | 170 | 542 | 2.55e-41 | 154 |
| Msa0789830 | MtrunA17_Chr5g0424131 | 30.602 | 415 | 241 | 12 | 70 | 461 | 111 | 501 | 5.00e-41 | 153 |
| Msa0789830 | MtrunA17_Chr4g0031741 | 30.025 | 403 | 237 | 13 | 72 | 458 | 276 | 649 | 9.51e-41 | 154 |
| Msa0789830 | MtrunA17_Chr2g0319091 | 30.549 | 419 | 226 | 16 | 70 | 459 | 197 | 579 | 1.74e-40 | 152 |
| Msa0789830 | MtrunA17_Chr3g0114841 | 31.221 | 426 | 220 | 16 | 70 | 458 | 110 | 499 | 3.26e-40 | 150 |
| Msa0789830 | MtrunA17_Chr2g0290241 | 30.079 | 379 | 211 | 14 | 103 | 460 | 81 | 426 | 2.15e-38 | 144 |
| Msa0789830 | MtrunA17_Chr8g0357601 | 29.298 | 413 | 229 | 17 | 74 | 459 | 176 | 552 | 9.68e-37 | 142 |
| Msa0789830 | MtrunA17_Chr4g0031711 | 29.750 | 400 | 238 | 14 | 77 | 458 | 358 | 732 | 2.42e-36 | 142 |
| Msa0789830 | MtrunA17_Chr4g0031701 | 29.188 | 394 | 236 | 13 | 77 | 452 | 251 | 619 | 3.15e-35 | 138 |
| Msa0789830 | MtrunA17_Chr4g0031731 | 29.640 | 361 | 222 | 12 | 77 | 419 | 251 | 597 | 1.97e-34 | 136 |
| Msa0789830 | MtrunA17_Chr2g0328341 | 29.146 | 398 | 231 | 15 | 80 | 458 | 272 | 637 | 7.02e-34 | 134 |
| Msa0789830 | MtrunA17_Chr7g0238891 | 27.204 | 397 | 244 | 14 | 80 | 459 | 372 | 740 | 7.15e-34 | 135 |
| Msa0789830 | MtrunA17_Chr2g0328411 | 26.087 | 414 | 259 | 13 | 61 | 458 | 271 | 653 | 8.95e-33 | 131 |
| Msa0789830 | MtrunA17_Chr2g0328391 | 26.895 | 409 | 244 | 14 | 73 | 458 | 292 | 668 | 1.53e-32 | 130 |
| Msa0789830 | MtrunA17_Chr2g0328381 | 27.665 | 394 | 242 | 13 | 80 | 458 | 275 | 640 | 2.12e-31 | 127 |
| Msa0789830 | MtrunA17_Chr2g0328431 | 25.758 | 396 | 249 | 12 | 77 | 458 | 289 | 653 | 9.11e-31 | 125 |
| Msa0789830 | MtrunA17_Chr4g0031721 | 28.173 | 394 | 242 | 15 | 80 | 458 | 316 | 683 | 4.55e-30 | 123 |
| Msa0789830 | MtrunA17_Chr2g0328401 | 26.685 | 356 | 232 | 9 | 77 | 418 | 287 | 627 | 1.87e-28 | 118 |
| Msa0789830 | MtrunA17_Chr2g0294461 | 25.542 | 415 | 265 | 12 | 65 | 459 | 195 | 585 | 5.76e-28 | 117 |
| Msa0789830 | MtrunA17_Chr8g0383981 | 30.479 | 397 | 224 | 18 | 77 | 458 | 136 | 495 | 2.16e-27 | 114 |
| Msa0789830 | MtrunA17_Chr3g0085681 | 23.661 | 448 | 256 | 13 | 71 | 459 | 16 | 436 | 5.97e-27 | 112 |
| Msa0789830 | MtrunA17_Chr5g0401131 | 27.451 | 408 | 239 | 15 | 79 | 459 | 113 | 490 | 6.30e-27 | 113 |
| Msa0789830 | MtrunA17_Chr2g0294471 | 25.234 | 428 | 247 | 15 | 65 | 459 | 189 | 576 | 6.60e-27 | 113 |
| Msa0789830 | MtrunA17_Chr7g0270031 | 25.845 | 414 | 255 | 14 | 67 | 461 | 176 | 556 | 1.74e-26 | 112 |
| Msa0789830 | MtrunA17_Chr2g0328361 | 26.515 | 396 | 219 | 16 | 80 | 458 | 274 | 614 | 4.52e-24 | 105 |
| Msa0789830 | MtrunA17_Chr2g0328371 | 32.157 | 255 | 135 | 13 | 160 | 396 | 12 | 246 | 1.19e-23 | 99.8 |
| Msa0789830 | MtrunA17_Chr7g0230731 | 26.718 | 393 | 245 | 15 | 77 | 459 | 369 | 728 | 1.66e-20 | 94.7 |
| Msa0789830 | MtrunA17_Chr7g0230771 | 26.617 | 402 | 234 | 16 | 77 | 459 | 372 | 731 | 2.50e-20 | 94.4 |
| Msa0789830 | MtrunA17_Chr3g0085361 | 23.333 | 360 | 193 | 12 | 156 | 459 | 18 | 350 | 9.34e-20 | 90.5 |
| Msa0789830 | MtrunA17_Chr6g0468561 | 26.895 | 409 | 227 | 15 | 81 | 459 | 296 | 662 | 1.03e-19 | 92.0 |
| Msa0789830 | MtrunA17_Chr4g0038851 | 28.889 | 225 | 150 | 4 | 71 | 293 | 39 | 255 | 2.81e-19 | 90.1 |
| Msa0789830 | MtrunA17_Chr4g0038851 | 31.325 | 166 | 96 | 4 | 295 | 460 | 323 | 470 | 6.92e-18 | 85.9 |
| Msa0789830 | MtrunA17_Chr7g0236851 | 26.263 | 396 | 240 | 13 | 81 | 458 | 295 | 656 | 3.49e-19 | 90.5 |
| Msa0789830 | MtrunA17_Chr5g0396491 | 27.473 | 273 | 160 | 9 | 71 | 336 | 47 | 288 | 4.78e-19 | 89.4 |
| Msa0789830 | MtrunA17_Chr5g0396491 | 29.070 | 172 | 104 | 4 | 289 | 460 | 326 | 479 | 1.21e-18 | 88.2 |
| Msa0789830 | MtrunA17_Chr5g0401421 | 23.333 | 450 | 252 | 14 | 76 | 458 | 22 | 445 | 1.90e-18 | 87.4 |
| Msa0789830 | MtrunA17_Chr2g0329591 | 24.590 | 366 | 240 | 11 | 111 | 459 | 105 | 451 | 2.53e-17 | 84.0 |
| Msa0789830 | MtrunA17_Chr8g0344101 | 23.227 | 409 | 256 | 14 | 79 | 459 | 222 | 600 | 1.89e-12 | 69.3 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0789830 | AT3G54220.1 | 34.884 | 387 | 204 | 12 | 85 | 458 | 298 | 649 | 4.73e-55 | 194 |
| Msa0789830 | AT1G14920.1 | 32.767 | 412 | 225 | 16 | 63 | 459 | 155 | 529 | 1.86e-53 | 187 |
| Msa0789830 | AT2G04890.1 | 31.840 | 424 | 252 | 12 | 45 | 459 | 18 | 413 | 1.95e-52 | 182 |
| Msa0789830 | AT3G03450.1 | 32.587 | 402 | 222 | 16 | 74 | 459 | 177 | 545 | 2.13e-50 | 180 |
| Msa0789830 | AT5G41920.1 | 32.108 | 408 | 229 | 12 | 66 | 460 | 29 | 401 | 4.29e-50 | 176 |
| Msa0789830 | AT2G01570.1 | 30.941 | 404 | 223 | 16 | 73 | 459 | 217 | 581 | 3.09e-49 | 177 |
| Msa0789830 | AT1G21450.1 | 30.982 | 397 | 231 | 12 | 79 | 459 | 224 | 593 | 4.17e-49 | 177 |
| Msa0789830 | AT5G17490.1 | 32.039 | 412 | 224 | 18 | 64 | 459 | 145 | 516 | 1.75e-48 | 174 |
| Msa0789830 | AT1G66350.1 | 31.078 | 399 | 221 | 16 | 74 | 459 | 149 | 506 | 3.51e-47 | 170 |
| Msa0789830 | AT5G48150.1 | 30.380 | 395 | 232 | 13 | 81 | 459 | 123 | 490 | 1.37e-46 | 168 |
| Msa0789830 | AT5G48150.4 | 30.380 | 395 | 232 | 13 | 81 | 459 | 123 | 490 | 1.37e-46 | 168 |
| Msa0789830 | AT5G48150.2 | 30.380 | 395 | 232 | 13 | 81 | 459 | 123 | 490 | 1.37e-46 | 168 |
| Msa0789830 | AT5G48150.3 | 30.380 | 395 | 232 | 13 | 81 | 459 | 123 | 490 | 1.37e-46 | 168 |
| Msa0789830 | AT1G55580.1 | 31.075 | 428 | 221 | 16 | 80 | 459 | 44 | 445 | 2.52e-46 | 166 |
| Msa0789830 | AT1G63100.1 | 29.381 | 388 | 227 | 11 | 99 | 460 | 264 | 630 | 4.57e-46 | 169 |
| Msa0789830 | AT1G63100.2 | 29.381 | 388 | 227 | 11 | 99 | 460 | 289 | 655 | 9.01e-46 | 169 |
| Msa0789830 | AT5G66770.1 | 32.658 | 395 | 229 | 14 | 76 | 459 | 216 | 584 | 8.57e-45 | 165 |
| Msa0789830 | AT4G08250.1 | 31.127 | 408 | 238 | 14 | 70 | 460 | 97 | 478 | 2.21e-42 | 157 |
| Msa0789830 | AT1G50600.3 | 29.873 | 395 | 235 | 12 | 80 | 459 | 159 | 526 | 1.12e-41 | 155 |
| Msa0789830 | AT3G50650.1 | 33.155 | 374 | 214 | 12 | 98 | 459 | 193 | 542 | 1.14e-41 | 155 |
| Msa0789830 | AT1G50600.1 | 29.873 | 395 | 235 | 12 | 80 | 459 | 230 | 597 | 5.14e-41 | 155 |
| Msa0789830 | AT1G50600.2 | 29.873 | 395 | 235 | 12 | 80 | 459 | 234 | 601 | 6.47e-41 | 154 |
| Msa0789830 | AT4G17230.1 | 29.829 | 409 | 227 | 13 | 75 | 459 | 153 | 525 | 4.79e-37 | 142 |
| Msa0789830 | AT4G17230.2 | 29.829 | 409 | 227 | 13 | 75 | 459 | 153 | 525 | 4.79e-37 | 142 |
| Msa0789830 | AT2G29060.1 | 27.456 | 397 | 250 | 13 | 80 | 461 | 321 | 694 | 1.07e-31 | 129 |
| Msa0789830 | AT1G50420.1 | 27.193 | 456 | 235 | 17 | 74 | 459 | 51 | 479 | 1.08e-31 | 127 |
| Msa0789830 | AT2G29060.2 | 27.456 | 397 | 250 | 13 | 80 | 461 | 284 | 657 | 1.25e-31 | 128 |
| Msa0789830 | AT2G37650.2 | 25.505 | 396 | 252 | 13 | 80 | 460 | 335 | 702 | 2.45e-30 | 124 |
| Msa0789830 | AT2G37650.1 | 25.505 | 396 | 252 | 13 | 80 | 460 | 347 | 714 | 2.83e-30 | 124 |
| Msa0789830 | AT2G29065.1 | 25.980 | 408 | 241 | 16 | 80 | 458 | 252 | 627 | 2.92e-29 | 121 |
| Msa0789830 | AT1G07530.1 | 26.396 | 394 | 250 | 14 | 80 | 458 | 396 | 764 | 4.22e-28 | 118 |
| Msa0789830 | AT3G46600.2 | 26.196 | 397 | 251 | 13 | 79 | 460 | 3 | 372 | 1.06e-27 | 114 |
| Msa0789830 | AT5G59450.1 | 25.369 | 406 | 259 | 13 | 72 | 459 | 219 | 598 | 3.15e-27 | 115 |
| Msa0789830 | AT3G46600.1 | 26.329 | 395 | 251 | 13 | 79 | 459 | 211 | 579 | 3.64e-27 | 115 |
| Msa0789830 | AT1G07520.2 | 25.187 | 401 | 252 | 15 | 80 | 458 | 154 | 528 | 4.01e-27 | 114 |
| Msa0789830 | AT1G07520.4 | 25.187 | 401 | 252 | 15 | 80 | 458 | 154 | 528 | 4.01e-27 | 114 |
| Msa0789830 | AT3G46600.3 | 26.329 | 395 | 251 | 13 | 79 | 459 | 179 | 547 | 5.60e-27 | 114 |
| Msa0789830 | AT1G07520.3 | 25.187 | 401 | 252 | 15 | 80 | 458 | 319 | 693 | 7.07e-27 | 114 |
| Msa0789830 | AT1G07520.1 | 25.187 | 401 | 252 | 15 | 80 | 458 | 318 | 692 | 7.25e-27 | 114 |
| Msa0789830 | AT3G60630.1 | 29.909 | 331 | 172 | 15 | 152 | 459 | 329 | 622 | 8.61e-26 | 110 |
| Msa0789830 | AT4G37650.1 | 23.716 | 409 | 258 | 13 | 80 | 459 | 146 | 529 | 1.61e-21 | 97.8 |
| Msa0789830 | AT5G52510.1 | 25.679 | 405 | 242 | 15 | 81 | 459 | 269 | 640 | 1.77e-21 | 97.8 |
| Msa0789830 | AT2G45160.1 | 28.997 | 369 | 194 | 18 | 115 | 459 | 315 | 639 | 1.99e-21 | 97.8 |
| Msa0789830 | AT4G00150.1 | 27.446 | 368 | 208 | 17 | 105 | 459 | 233 | 554 | 1.02e-20 | 95.5 |
| Msa0789830 | AT4G36710.1 | 24.570 | 407 | 262 | 14 | 66 | 459 | 111 | 485 | 5.57e-20 | 92.8 |
| Msa0789830 | AT3G49950.1 | 22.892 | 415 | 255 | 13 | 79 | 461 | 29 | 410 | 7.42e-19 | 89.0 |
Find 56 sgRNAs with CRISPR-Local
Find 152 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AAGAAGGTGGTGGTGGTTTC+AGG | 0.088549 | 5_3:-459144 | Msa0789830:CDS |
| GATCAAGAGTAATTAATTTA+AGG | 0.159758 | 5_3:-459642 | Msa0789830:CDS |
| GTGGAAACAGAATCTCTTTC+AGG | 0.211105 | 5_3:-459777 | Msa0789830:CDS |
| TCTCTTTAGGATGGCAAAAT+AGG | 0.236883 | 5_3:-459093 | Msa0789830:CDS |
| AGAATCTCTTTCAGGTTAAC+TGG | 0.299270 | 5_3:-459769 | Msa0789830:CDS |
| TCTTTCAGGTTAACTGGTTT+CGG | 0.304366 | 5_3:-459763 | Msa0789830:CDS |
| GTTAGTTTCTCAAAAGGTTT+TGG | 0.310158 | 5_3:-459700 | Msa0789830:CDS |
| CACAGCAAATCAAGCTATCT+TGG | 0.326969 | 5_3:-459917 | Msa0789830:CDS |
| GTGAGAAGTAAGTGAATTAA+TGG | 0.332976 | 5_3:+460195 | None:intergenic |
| GATGGAAGGGCTATCTCTTT+AGG | 0.338311 | 5_3:-459106 | Msa0789830:CDS |
| TCCATCAACATTTCATAGAA+TGG | 0.366218 | 5_3:+460018 | None:intergenic |
| AGAAACTCTTCGTCGATTGT+TGG | 0.372995 | 5_3:+459991 | None:intergenic |
| ATGGAGAATCATGGATTTGT+TGG | 0.401767 | 5_3:-459250 | Msa0789830:CDS |
| ACCATTCTATGAAATGTTGA+TGG | 0.404027 | 5_3:-460019 | Msa0789830:CDS |
| AGAAGGTGGTGGTGGTTTCA+GGG | 0.404726 | 5_3:-459143 | Msa0789830:CDS |
| GAGTTTCAAGGTTTGTTAAG+AGG | 0.425739 | 5_3:-459664 | Msa0789830:CDS |
| TTCTGTTGATGAAAACAACT+TGG | 0.427192 | 5_3:-460163 | Msa0789830:CDS |
| CTGTTTGGTAAAGATCTGTT+AGG | 0.427840 | 5_3:+460124 | None:intergenic |
| CCACTTCAATTTGAGGAAGA+AGG | 0.429497 | 5_3:-459160 | Msa0789830:CDS |
| TTGAAAATAACTGACACATT+GGG | 0.429946 | 5_3:-459556 | Msa0789830:CDS |
| AGTTTCACTCACCGGTGATT+CGG | 0.439232 | 5_3:-460103 | Msa0789830:CDS |
| AAGGTTAAGAATTGAGAAGA+AGG | 0.444053 | 5_3:-459374 | Msa0789830:CDS |
| CTTGATAAGAAGGTTCTACT+AGG | 0.446731 | 5_3:+459472 | None:intergenic |
| TTGCTGTGAAATGAGCAAAT+TGG | 0.450939 | 5_3:+459932 | None:intergenic |
| CACCGGTGAGTGAAACTGTT+TGG | 0.458694 | 5_3:+460109 | None:intergenic |
| AGGTTAGTTAGTTTCTCAAA+AGG | 0.468291 | 5_3:-459706 | Msa0789830:CDS |
| AACTCCTATGAAGGCTATGA+AGG | 0.469990 | 5_3:-460297 | Msa0789830:CDS |
| TTTGAGGAAGAAGGTGGTGG+TGG | 0.477498 | 5_3:-459151 | Msa0789830:CDS |
| AGGGTTTCAGAAAGAGATGA+TGG | 0.479941 | 5_3:-459124 | Msa0789830:CDS |
| TTCTTTCTCTATTAACTGAA+AGG | 0.482856 | 5_3:+460379 | None:intergenic |
| ATTGAAAATAACTGACACAT+TGG | 0.484927 | 5_3:-459557 | Msa0789830:CDS |
| TTATTGTCCACTTCAATTTG+AGG | 0.488195 | 5_3:-459167 | Msa0789830:CDS |
| CTCAACATTGAAGATTCAAA+TGG | 0.488668 | 5_3:-460222 | Msa0789830:CDS |
| GGAAACATGGAAAAGTAGAA+TGG | 0.498264 | 5_3:-459269 | Msa0789830:CDS |
| AGCTTCAAGAAACTGAATCT+AGG | 0.507835 | 5_3:-459726 | Msa0789830:CDS |
| AAAAGTAGAATGGAGAATCA+TGG | 0.508498 | 5_3:-459259 | Msa0789830:CDS |
| CCTTCTTCCTCAAATTGAAG+TGG | 0.513172 | 5_3:+459160 | None:intergenic |
| ACTAATAGAAACTCCTATGA+AGG | 0.514783 | 5_3:-460306 | Msa0789830:CDS |
| AAATGAGCAAATTGGTAATA+CGG | 0.517397 | 5_3:+459940 | None:intergenic |
| TACCAAACAGTTTCACTCAC+CGG | 0.521272 | 5_3:-460111 | Msa0789830:CDS |
| GACACGTTGAACCGAATCAC+CGG | 0.538056 | 5_3:+460092 | None:intergenic |
| AACCTTTCAATACTCTCAAG+TGG | 0.550308 | 5_3:+459391 | None:intergenic |
| GTCTGTGAATCTTGATAAGA+AGG | 0.567154 | 5_3:+459462 | None:intergenic |
| CAATTTGAGGAAGAAGGTGG+TGG | 0.571559 | 5_3:-459154 | Msa0789830:CDS |
| GTTGTTGTTGTTGAACAAGA+AGG | 0.574596 | 5_3:-459505 | Msa0789830:CDS |
| GTCGTCGCATATTTCACCGA+TGG | 0.586765 | 5_3:-460072 | Msa0789830:CDS |
| TTTCAGAAAGAGATGATGGA+AGG | 0.599854 | 5_3:-459120 | Msa0789830:CDS |
| GCTTAATAACTATGATGATG+TGG | 0.611848 | 5_3:-459326 | Msa0789830:CDS |
| AATCAATAACATGAATAGAA+CGG | 0.614448 | 5_3:+459863 | None:intergenic |
| TACCACTTGAGAGTATTGAA+AGG | 0.618047 | 5_3:-459393 | Msa0789830:CDS |
| GAAAGTGATTGAATCAGTGA+AGG | 0.619627 | 5_3:+459814 | None:intergenic |
| TTCAGAAAGAGATGATGGAA+GGG | 0.626052 | 5_3:-459119 | Msa0789830:CDS |
| CTTCAATTTGAGGAAGAAGG+TGG | 0.626263 | 5_3:-459157 | Msa0789830:CDS |
| GAAGGGCTATCTCTTTAGGA+TGG | 0.630794 | 5_3:-459102 | Msa0789830:CDS |
| AATAACTATGATGATGTGGA+TGG | 0.639203 | 5_3:-459322 | Msa0789830:CDS |
| AACTATGATGATGTGGATGG+TGG | 0.649454 | 5_3:-459319 | Msa0789830:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TAATAGAGAAAGAAAAAAGA+AGG | - | chr5_3:459107-459126 | Msa0789830:CDS | 20.0% |
| !! | AATAGAGAAAGAAAAAAGAA+GGG | - | chr5_3:459108-459127 | Msa0789830:CDS | 20.0% |
| !! | AATCAATAACATGAATAGAA+CGG | + | chr5_3:459617-459636 | None:intergenic | 20.0% |
| !!! | ATTGATTTTGATGTTTCATA+TGG | - | chr5_3:459630-459649 | Msa0789830:CDS | 20.0% |
| !! | GATCAAGAGTAATTAATTTA+AGG | - | chr5_3:459835-459854 | Msa0789830:CDS | 20.0% |
| !!! | ACAACTCATTTTGTTTAAAT+AGG | + | chr5_3:459898-459917 | None:intergenic | 20.0% |
| !! | TTGTGCAAAATATGAAAAAA+TGG | - | chr5_3:460187-460206 | Msa0789830:CDS | 20.0% |
| !! | AATATGAAAAAATGGAAACA+TGG | - | chr5_3:460195-460214 | Msa0789830:CDS | 20.0% |
| !! | TAATAGAGAAAGAAAAAAGA+AGG | - | chr5_3:459107-459126 | Msa0789830:CDS | 20.0% |
| !! | AATAGAGAAAGAAAAAAGAA+GGG | - | chr5_3:459108-459127 | Msa0789830:CDS | 20.0% |
| !! | AATCAATAACATGAATAGAA+CGG | + | chr5_3:459617-459636 | None:intergenic | 20.0% |
| !!! | ATTGATTTTGATGTTTCATA+TGG | - | chr5_3:459630-459649 | Msa0789830:CDS | 20.0% |
| !! | GATCAAGAGTAATTAATTTA+AGG | - | chr5_3:459835-459854 | Msa0789830:CDS | 20.0% |
| !!! | ACAACTCATTTTGTTTAAAT+AGG | + | chr5_3:459898-459917 | None:intergenic | 20.0% |
| !! | TTGTGCAAAATATGAAAAAA+TGG | - | chr5_3:460187-460206 | Msa0789830:CDS | 20.0% |
| !! | AATATGAAAAAATGGAAACA+TGG | - | chr5_3:460195-460214 | Msa0789830:CDS | 20.0% |
| ! | TTCTTTCTCTATTAACTGAA+AGG | + | chr5_3:459101-459120 | None:intergenic | 25.0% |
| !! | AAATGAGCAAATTGGTAATA+CGG | + | chr5_3:459540-459559 | None:intergenic | 25.0% |
| !!! | TTTCTCTTCTTCTTTTTCAA+AGG | + | chr5_3:459589-459608 | None:intergenic | 25.0% |
| !! | ATGTTTCATATGGTTTTCAA+TGG | - | chr5_3:459640-459659 | Msa0789830:CDS | 25.0% |
| !!! | AACATTGTTTTTGAGTTTCA+AGG | - | chr5_3:459801-459820 | Msa0789830:CDS | 25.0% |
| ! | ATTGAAAATAACTGACACAT+TGG | - | chr5_3:459920-459939 | Msa0789830:CDS | 25.0% |
| ! | TTGAAAATAACTGACACATT+GGG | - | chr5_3:459921-459940 | Msa0789830:CDS | 25.0% |
| ! | TTCTTTCTCTATTAACTGAA+AGG | + | chr5_3:459101-459120 | None:intergenic | 25.0% |
| !! | AAATGAGCAAATTGGTAATA+CGG | + | chr5_3:459540-459559 | None:intergenic | 25.0% |
| !!! | TTTCTCTTCTTCTTTTTCAA+AGG | + | chr5_3:459589-459608 | None:intergenic | 25.0% |
| !! | ATGTTTCATATGGTTTTCAA+TGG | - | chr5_3:459640-459659 | Msa0789830:CDS | 25.0% |
| !!! | AACATTGTTTTTGAGTTTCA+AGG | - | chr5_3:459801-459820 | Msa0789830:CDS | 25.0% |
| ! | ATTGAAAATAACTGACACAT+TGG | - | chr5_3:459920-459939 | Msa0789830:CDS | 25.0% |
| ! | TTGAAAATAACTGACACATT+GGG | - | chr5_3:459921-459940 | Msa0789830:CDS | 25.0% |
| ACTAATAGAAACTCCTATGA+AGG | - | chr5_3:459171-459190 | Msa0789830:CDS | 30.0% | |
| CTCAACATTGAAGATTCAAA+TGG | - | chr5_3:459255-459274 | Msa0789830:CDS | 30.0% | |
| GTGAGAAGTAAGTGAATTAA+TGG | + | chr5_3:459285-459304 | None:intergenic | 30.0% | |
| ! | TTCTGTTGATGAAAACAACT+TGG | - | chr5_3:459314-459333 | Msa0789830:CDS | 30.0% |
| !!! | AGAATGGTGATTTTTTTGTG+AGG | + | chr5_3:459446-459465 | None:intergenic | 30.0% |
| ACCATTCTATGAAATGTTGA+TGG | - | chr5_3:459458-459477 | Msa0789830:CDS | 30.0% | |
| TCCATCAACATTTCATAGAA+TGG | + | chr5_3:459462-459481 | None:intergenic | 30.0% | |
| ! | AGGTTAGTTAGTTTCTCAAA+AGG | - | chr5_3:459771-459790 | Msa0789830:CDS | 30.0% |
| !! | GTTAGTTTCTCAAAAGGTTT+TGG | - | chr5_3:459777-459796 | Msa0789830:CDS | 30.0% |
| GAAGAAGAAAAATGAAACTG+TGG | - | chr5_3:459857-459876 | Msa0789830:CDS | 30.0% | |
| TTGTTCAACAACAACAACAA+TGG | + | chr5_3:459970-459989 | None:intergenic | 30.0% | |
| AAGGTTAAGAATTGAGAAGA+AGG | - | chr5_3:460103-460122 | Msa0789830:CDS | 30.0% | |
| ! | AGAATTGAGAAGAAGGTTTT+TGG | - | chr5_3:460110-460129 | Msa0789830:CDS | 30.0% |
| ! | GCTTAATAACTATGATGATG+TGG | - | chr5_3:460151-460170 | Msa0789830:CDS | 30.0% |
| ! | AATAACTATGATGATGTGGA+TGG | - | chr5_3:460155-460174 | Msa0789830:CDS | 30.0% |
| AAAAGTAGAATGGAGAATCA+TGG | - | chr5_3:460218-460237 | Msa0789830:CDS | 30.0% | |
| TTATTGTCCACTTCAATTTG+AGG | - | chr5_3:460310-460329 | Msa0789830:CDS | 30.0% | |
| ACTAATAGAAACTCCTATGA+AGG | - | chr5_3:459171-459190 | Msa0789830:CDS | 30.0% | |
| CTCAACATTGAAGATTCAAA+TGG | - | chr5_3:459255-459274 | Msa0789830:CDS | 30.0% | |
| GTGAGAAGTAAGTGAATTAA+TGG | + | chr5_3:459285-459304 | None:intergenic | 30.0% | |
| ! | TTCTGTTGATGAAAACAACT+TGG | - | chr5_3:459314-459333 | Msa0789830:CDS | 30.0% |
| !!! | AGAATGGTGATTTTTTTGTG+AGG | + | chr5_3:459446-459465 | None:intergenic | 30.0% |
| ACCATTCTATGAAATGTTGA+TGG | - | chr5_3:459458-459477 | Msa0789830:CDS | 30.0% | |
| TCCATCAACATTTCATAGAA+TGG | + | chr5_3:459462-459481 | None:intergenic | 30.0% | |
| ! | AGGTTAGTTAGTTTCTCAAA+AGG | - | chr5_3:459771-459790 | Msa0789830:CDS | 30.0% |
| !! | GTTAGTTTCTCAAAAGGTTT+TGG | - | chr5_3:459777-459796 | Msa0789830:CDS | 30.0% |
| GAAGAAGAAAAATGAAACTG+TGG | - | chr5_3:459857-459876 | Msa0789830:CDS | 30.0% | |
| TTGTTCAACAACAACAACAA+TGG | + | chr5_3:459970-459989 | None:intergenic | 30.0% | |
| AAGGTTAAGAATTGAGAAGA+AGG | - | chr5_3:460103-460122 | Msa0789830:CDS | 30.0% | |
| ! | AGAATTGAGAAGAAGGTTTT+TGG | - | chr5_3:460110-460129 | Msa0789830:CDS | 30.0% |
| ! | GCTTAATAACTATGATGATG+TGG | - | chr5_3:460151-460170 | Msa0789830:CDS | 30.0% |
| ! | AATAACTATGATGATGTGGA+TGG | - | chr5_3:460155-460174 | Msa0789830:CDS | 30.0% |
| AAAAGTAGAATGGAGAATCA+TGG | - | chr5_3:460218-460237 | Msa0789830:CDS | 30.0% | |
| TTATTGTCCACTTCAATTTG+AGG | - | chr5_3:460310-460329 | Msa0789830:CDS | 30.0% | |
| ! | TTTTCCTTCATAGCCTTCAT+AGG | + | chr5_3:459187-459206 | None:intergenic | 35.0% |
| CTGTTTGGTAAAGATCTGTT+AGG | + | chr5_3:459356-459375 | None:intergenic | 35.0% | |
| ! | GAGTTTTGCAGTTAAACCAT+CGG | + | chr5_3:459424-459443 | None:intergenic | 35.0% |
| TTGCTGTGAAATGAGCAAAT+TGG | + | chr5_3:459548-459567 | None:intergenic | 35.0% | |
| GAAAGTGATTGAATCAGTGA+AGG | + | chr5_3:459666-459685 | None:intergenic | 35.0% | |
| CTTTCAGAAAAAGCAACAAG+TGG | - | chr5_3:459681-459700 | Msa0789830:CDS | 35.0% | |
| !! | AGAATCTCTTTCAGGTTAAC+TGG | - | chr5_3:459708-459727 | Msa0789830:CDS | 35.0% |
| !! | TCTTTCAGGTTAACTGGTTT+CGG | - | chr5_3:459714-459733 | Msa0789830:CDS | 35.0% |
| AGCTTCAAGAAACTGAATCT+AGG | - | chr5_3:459751-459770 | Msa0789830:CDS | 35.0% | |
| !! | GAGTTTCAAGGTTTGTTAAG+AGG | - | chr5_3:459813-459832 | Msa0789830:CDS | 35.0% |
| GAAGAAAAATGAAACTGTGG+CGG | - | chr5_3:459860-459879 | Msa0789830:CDS | 35.0% | |
| CAACAACAACAACAATGGAA+GGG | + | chr5_3:459965-459984 | None:intergenic | 35.0% | |
| TCAACAACAACAACAATGGA+AGG | + | chr5_3:459966-459985 | None:intergenic | 35.0% | |
| ! | GTTGTTGTTGTTGAACAAGA+AGG | - | chr5_3:459972-459991 | Msa0789830:CDS | 35.0% |
| CTTGATAAGAAGGTTCTACT+AGG | + | chr5_3:460008-460027 | None:intergenic | 35.0% | |
| GTCTGTGAATCTTGATAAGA+AGG | + | chr5_3:460018-460037 | None:intergenic | 35.0% | |
| !! | TACCACTTGAGAGTATTGAA+AGG | - | chr5_3:460084-460103 | Msa0789830:CDS | 35.0% |
| AACCTTTCAATACTCTCAAG+TGG | + | chr5_3:460089-460108 | None:intergenic | 35.0% | |
| GGAAACATGGAAAAGTAGAA+TGG | - | chr5_3:460208-460227 | Msa0789830:CDS | 35.0% | |
| ATGGAGAATCATGGATTTGT+TGG | - | chr5_3:460227-460246 | Msa0789830:CDS | 35.0% | |
| !! | TTTCAGAAAGAGATGATGGA+AGG | - | chr5_3:460357-460376 | Msa0789830:CDS | 35.0% |
| !! | TTCAGAAAGAGATGATGGAA+GGG | - | chr5_3:460358-460377 | Msa0789830:CDS | 35.0% |
| !! | TCTCTTTAGGATGGCAAAAT+AGG | - | chr5_3:460384-460403 | Msa0789830:CDS | 35.0% |
| ! | TTTTCCTTCATAGCCTTCAT+AGG | + | chr5_3:459187-459206 | None:intergenic | 35.0% |
| CTGTTTGGTAAAGATCTGTT+AGG | + | chr5_3:459356-459375 | None:intergenic | 35.0% | |
| ! | GAGTTTTGCAGTTAAACCAT+CGG | + | chr5_3:459424-459443 | None:intergenic | 35.0% |
| TTGCTGTGAAATGAGCAAAT+TGG | + | chr5_3:459548-459567 | None:intergenic | 35.0% | |
| GAAAGTGATTGAATCAGTGA+AGG | + | chr5_3:459666-459685 | None:intergenic | 35.0% | |
| CTTTCAGAAAAAGCAACAAG+TGG | - | chr5_3:459681-459700 | Msa0789830:CDS | 35.0% | |
| !! | AGAATCTCTTTCAGGTTAAC+TGG | - | chr5_3:459708-459727 | Msa0789830:CDS | 35.0% |
| !! | TCTTTCAGGTTAACTGGTTT+CGG | - | chr5_3:459714-459733 | Msa0789830:CDS | 35.0% |
| AGCTTCAAGAAACTGAATCT+AGG | - | chr5_3:459751-459770 | Msa0789830:CDS | 35.0% | |
| !! | GAGTTTCAAGGTTTGTTAAG+AGG | - | chr5_3:459813-459832 | Msa0789830:CDS | 35.0% |
| GAAGAAAAATGAAACTGTGG+CGG | - | chr5_3:459860-459879 | Msa0789830:CDS | 35.0% | |
| CAACAACAACAACAATGGAA+GGG | + | chr5_3:459965-459984 | None:intergenic | 35.0% | |
| TCAACAACAACAACAATGGA+AGG | + | chr5_3:459966-459985 | None:intergenic | 35.0% | |
| ! | GTTGTTGTTGTTGAACAAGA+AGG | - | chr5_3:459972-459991 | Msa0789830:CDS | 35.0% |
| CTTGATAAGAAGGTTCTACT+AGG | + | chr5_3:460008-460027 | None:intergenic | 35.0% | |
| GTCTGTGAATCTTGATAAGA+AGG | + | chr5_3:460018-460037 | None:intergenic | 35.0% | |
| !! | TACCACTTGAGAGTATTGAA+AGG | - | chr5_3:460084-460103 | Msa0789830:CDS | 35.0% |
| AACCTTTCAATACTCTCAAG+TGG | + | chr5_3:460089-460108 | None:intergenic | 35.0% | |
| GGAAACATGGAAAAGTAGAA+TGG | - | chr5_3:460208-460227 | Msa0789830:CDS | 35.0% | |
| ATGGAGAATCATGGATTTGT+TGG | - | chr5_3:460227-460246 | Msa0789830:CDS | 35.0% | |
| !! | TTTCAGAAAGAGATGATGGA+AGG | - | chr5_3:460357-460376 | Msa0789830:CDS | 35.0% |
| !! | TTCAGAAAGAGATGATGGAA+GGG | - | chr5_3:460358-460377 | Msa0789830:CDS | 35.0% |
| !! | TCTCTTTAGGATGGCAAAAT+AGG | - | chr5_3:460384-460403 | Msa0789830:CDS | 35.0% |
| AACTCCTATGAAGGCTATGA+AGG | - | chr5_3:459180-459199 | Msa0789830:CDS | 40.0% | |
| TACCAAACAGTTTCACTCAC+CGG | - | chr5_3:459366-459385 | Msa0789830:CDS | 40.0% | |
| ! | AGAAACTCTTCGTCGATTGT+TGG | + | chr5_3:459489-459508 | None:intergenic | 40.0% |
| CACAGCAAATCAAGCTATCT+TGG | - | chr5_3:459560-459579 | Msa0789830:CDS | 40.0% | |
| GTGGAAACAGAATCTCTTTC+AGG | - | chr5_3:459700-459719 | Msa0789830:CDS | 40.0% | |
| ! | AACTATGATGATGTGGATGG+TGG | - | chr5_3:460158-460177 | Msa0789830:CDS | 40.0% |
| CCTTCTTCCTCAAATTGAAG+TGG | + | chr5_3:460320-460339 | None:intergenic | 40.0% | |
| CCACTTCAATTTGAGGAAGA+AGG | - | chr5_3:460317-460336 | Msa0789830:CDS | 40.0% | |
| CTTCAATTTGAGGAAGAAGG+TGG | - | chr5_3:460320-460339 | Msa0789830:CDS | 40.0% | |
| AGGGTTTCAGAAAGAGATGA+TGG | - | chr5_3:460353-460372 | Msa0789830:CDS | 40.0% | |
| ! | TTTTGCTTACTGTGTCAGCA+TGG | - | chr5_3:460408-460427 | Msa0789830:CDS | 40.0% |
| AACTCCTATGAAGGCTATGA+AGG | - | chr5_3:459180-459199 | Msa0789830:CDS | 40.0% | |
| TACCAAACAGTTTCACTCAC+CGG | - | chr5_3:459366-459385 | Msa0789830:CDS | 40.0% | |
| ! | AGAAACTCTTCGTCGATTGT+TGG | + | chr5_3:459489-459508 | None:intergenic | 40.0% |
| CACAGCAAATCAAGCTATCT+TGG | - | chr5_3:459560-459579 | Msa0789830:CDS | 40.0% | |
| GTGGAAACAGAATCTCTTTC+AGG | - | chr5_3:459700-459719 | Msa0789830:CDS | 40.0% | |
| ! | AACTATGATGATGTGGATGG+TGG | - | chr5_3:460158-460177 | Msa0789830:CDS | 40.0% |
| CCTTCTTCCTCAAATTGAAG+TGG | + | chr5_3:460320-460339 | None:intergenic | 40.0% | |
| CCACTTCAATTTGAGGAAGA+AGG | - | chr5_3:460317-460336 | Msa0789830:CDS | 40.0% | |
| CTTCAATTTGAGGAAGAAGG+TGG | - | chr5_3:460320-460339 | Msa0789830:CDS | 40.0% | |
| AGGGTTTCAGAAAGAGATGA+TGG | - | chr5_3:460353-460372 | Msa0789830:CDS | 40.0% | |
| ! | TTTTGCTTACTGTGTCAGCA+TGG | - | chr5_3:460408-460427 | Msa0789830:CDS | 40.0% |
| AGTTTCACTCACCGGTGATT+CGG | - | chr5_3:459374-459393 | Msa0789830:CDS | 45.0% | |
| CAATTTGAGGAAGAAGGTGG+TGG | - | chr5_3:460323-460342 | Msa0789830:CDS | 45.0% | |
| GATGGAAGGGCTATCTCTTT+AGG | - | chr5_3:460371-460390 | Msa0789830:CDS | 45.0% | |
| ! | GAAGGGCTATCTCTTTAGGA+TGG | - | chr5_3:460375-460394 | Msa0789830:CDS | 45.0% |
| AGTTTCACTCACCGGTGATT+CGG | - | chr5_3:459374-459393 | Msa0789830:CDS | 45.0% | |
| CAATTTGAGGAAGAAGGTGG+TGG | - | chr5_3:460323-460342 | Msa0789830:CDS | 45.0% | |
| GATGGAAGGGCTATCTCTTT+AGG | - | chr5_3:460371-460390 | Msa0789830:CDS | 45.0% | |
| ! | GAAGGGCTATCTCTTTAGGA+TGG | - | chr5_3:460375-460394 | Msa0789830:CDS | 45.0% |
| CACCGGTGAGTGAAACTGTT+TGG | + | chr5_3:459371-459390 | None:intergenic | 50.0% | |
| GACACGTTGAACCGAATCAC+CGG | + | chr5_3:459388-459407 | None:intergenic | 50.0% | |
| GTCGTCGCATATTTCACCGA+TGG | - | chr5_3:459405-459424 | Msa0789830:CDS | 50.0% | |
| ! | TTTGAGGAAGAAGGTGGTGG+TGG | - | chr5_3:460326-460345 | Msa0789830:CDS | 50.0% |
| !! | AAGAAGGTGGTGGTGGTTTC+AGG | - | chr5_3:460333-460352 | Msa0789830:CDS | 50.0% |
| !! | AGAAGGTGGTGGTGGTTTCA+GGG | - | chr5_3:460334-460353 | Msa0789830:CDS | 50.0% |
| CACCGGTGAGTGAAACTGTT+TGG | + | chr5_3:459371-459390 | None:intergenic | 50.0% | |
| GACACGTTGAACCGAATCAC+CGG | + | chr5_3:459388-459407 | None:intergenic | 50.0% | |
| GTCGTCGCATATTTCACCGA+TGG | - | chr5_3:459405-459424 | Msa0789830:CDS | 50.0% | |
| ! | TTTGAGGAAGAAGGTGGTGG+TGG | - | chr5_3:460326-460345 | Msa0789830:CDS | 50.0% |
| !! | AAGAAGGTGGTGGTGGTTTC+AGG | - | chr5_3:460333-460352 | Msa0789830:CDS | 50.0% |
| !! | AGAAGGTGGTGGTGGTTTCA+GGG | - | chr5_3:460334-460353 | Msa0789830:CDS | 50.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr5_3 | gene | 459057 | 460442 | 459057 | ID=Msa0789830;Name=Msa0789830 |
| chr5_3 | mRNA | 459057 | 460442 | 459057 | ID=Msa0789830-mRNA-1;Parent=Msa0789830;Name=Msa0789830-mRNA-1;_AED=0.00;_eAED=0.00;_QI=0|-1|0|1|-1|1|1|0|461 |
| chr5_3 | exon | 459057 | 460442 | 459057 | ID=Msa0789830-mRNA-1:exon:100;Parent=Msa0789830-mRNA-1 |
| chr5_3 | CDS | 459057 | 460442 | 459057 | ID=Msa0789830-mRNA-1:cds;Parent=Msa0789830-mRNA-1 |
| Gene Sequence |
| Protein sequence |
