Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1125810 | XP_024625327.1 | 96.095 | 461 | 12 | 3 | 1 | 456 | 1 | 460 | 0.0 | 915 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1125810 | Q2HTF1 | 96.095 | 461 | 12 | 3 | 1 | 456 | 1 | 460 | 0.0 | 915 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0006980 | Msa1125810 | 0.845122 | 4.944471e-59 | -8.615850e-47 |
| Msa0015710 | Msa1125810 | 0.816170 | 6.349088e-52 | -8.615850e-47 |
| Msa0019600 | Msa1125810 | 0.831296 | 1.808805e-55 | -8.615850e-47 |
| Msa0669840 | Msa1125810 | 0.863313 | 2.720686e-64 | -8.615850e-47 |
| Msa0709450 | Msa1125810 | 0.885538 | 7.458000e-72 | -8.615850e-47 |
| Msa0711320 | Msa1125810 | 0.822973 | 1.778880e-53 | -8.615850e-47 |
| Msa0725860 | Msa1125810 | 0.828998 | 6.582202e-55 | -8.615850e-47 |
| Msa0739470 | Msa1125810 | 0.816744 | 4.722975e-52 | -8.615850e-47 |
| Msa0739580 | Msa1125810 | 0.821119 | 4.781625e-53 | -8.615850e-47 |
| Msa0751890 | Msa1125810 | 0.836184 | 1.085886e-56 | -8.615850e-47 |
| Msa0752840 | Msa1125810 | 0.850554 | 1.575549e-60 | -8.615850e-47 |
| Msa0782230 | Msa1125810 | 0.806272 | 8.915343e-50 | -8.615850e-47 |
| Msa0786040 | Msa1125810 | 0.806654 | 7.405267e-50 | -8.615850e-47 |
| Msa0789830 | Msa1125810 | 0.802880 | 4.546751e-49 | -8.615850e-47 |
| Msa0819890 | Msa1125810 | 0.831573 | 1.546485e-55 | -8.615850e-47 |
| Msa0823400 | Msa1125810 | 0.805485 | 1.304724e-49 | -8.615850e-47 |
| Msa0828830 | Msa1125810 | 0.807345 | 5.290341e-50 | -8.615850e-47 |
| Msa0831940 | Msa1125810 | 0.858132 | 1.015850e-62 | -8.615850e-47 |
| Msa0124130 | Msa1125810 | 0.872294 | 3.551049e-67 | -8.615850e-47 |
| Msa0149140 | Msa1125810 | 0.865212 | 6.953612e-65 | -8.615850e-47 |
| Msa0152480 | Msa1125810 | 0.822407 | 2.408076e-53 | -8.615850e-47 |
| Msa0152500 | Msa1125810 | 0.830579 | 2.713159e-55 | -8.615850e-47 |
| Msa0185490 | Msa1125810 | 0.810110 | 1.356437e-50 | -8.615850e-47 |
| Msa0212080 | Msa1125810 | 0.814436 | 1.542464e-51 | -8.615850e-47 |
| Msa0212150 | Msa1125810 | 0.805161 | 1.525648e-49 | -8.615850e-47 |
| Msa0215640 | Msa1125810 | 0.810556 | 1.087015e-50 | -8.615850e-47 |
| Msa0373960 | Msa1125810 | 0.814074 | 1.854283e-51 | -8.615850e-47 |
| Msa0385390 | Msa1125810 | 0.812494 | 4.121075e-51 | -8.615850e-47 |
| Msa0392420 | Msa1125810 | 0.826120 | 3.228852e-54 | -8.615850e-47 |
| Msa0392460 | Msa1125810 | 0.822002 | 2.989289e-53 | -8.615850e-47 |
| Msa0392490 | Msa1125810 | 0.820340 | 7.224561e-53 | -8.615850e-47 |
| Msa0406000 | Msa1125810 | 0.854803 | 9.651653e-62 | -8.615850e-47 |
| Msa0415320 | Msa1125810 | 0.840591 | 7.931195e-58 | -8.615850e-47 |
| Msa0423100 | Msa1125810 | 0.825390 | 4.811690e-54 | -8.615850e-47 |
| Msa0424330 | Msa1125810 | 0.821291 | 4.364416e-53 | -8.615850e-47 |
| Msa0424340 | Msa1125810 | 0.836852 | 7.341381e-57 | -8.615850e-47 |
| Msa0424350 | Msa1125810 | 0.833674 | 4.655909e-56 | -8.615850e-47 |
| Msa0441590 | Msa1125810 | 0.849924 | 2.365986e-60 | -8.615850e-47 |
| Msa0451400 | Msa1125810 | 0.852785 | 3.676563e-61 | -8.615850e-47 |
| Msa0469260 | Msa1125810 | 0.822167 | 2.738024e-53 | -8.615850e-47 |
| Msa0996270 | Msa1125810 | 0.848066 | 7.765285e-60 | -8.615850e-47 |
| Msa0999300 | Msa1125810 | 0.820676 | 6.047659e-53 | -8.615850e-47 |
| Msa0999340 | Msa1125810 | 0.817999 | 2.464029e-52 | -8.615850e-47 |
| Msa0999350 | Msa1125810 | 0.807140 | 5.846758e-50 | -8.615850e-47 |
| Msa0999360 | Msa1125810 | 0.802971 | 4.354738e-49 | -8.615850e-47 |
| Msa0999390 | Msa1125810 | 0.825330 | 4.970505e-54 | -8.615850e-47 |
| Msa0999700 | Msa1125810 | 0.812305 | 4.532145e-51 | -8.615850e-47 |
| Msa1037890 | Msa1125810 | 0.817850 | 2.662738e-52 | -8.615850e-47 |
| Msa1037900 | Msa1125810 | 0.811544 | 6.638882e-51 | -8.615850e-47 |
| Msa1037910 | Msa1125810 | 0.802471 | 5.522530e-49 | -8.615850e-47 |
| Msa1084520 | Msa1125810 | 0.925452 | 1.799414e-90 | -8.615850e-47 |
| Msa0252630 | Msa1125810 | 0.834434 | 3.004299e-56 | -8.615850e-47 |
| Msa0252770 | Msa1125810 | 0.808033 | 3.778206e-50 | -8.615850e-47 |
| Msa0291330 | Msa1125810 | 0.816922 | 4.307255e-52 | -8.615850e-47 |
| Msa0301580 | Msa1125810 | 0.802874 | 4.561615e-49 | -8.615850e-47 |
| Msa0306120 | Msa1125810 | 0.804731 | 1.876200e-49 | -8.615850e-47 |
| Msa0329620 | Msa1125810 | 0.803507 | 3.372632e-49 | -8.615850e-47 |
| Msa0333450 | Msa1125810 | 0.802003 | 6.895482e-49 | -8.615850e-47 |
| Msa0333700 | Msa1125810 | 0.821605 | 3.693902e-53 | -8.615850e-47 |
| Msa0343660 | Msa1125810 | 0.835067 | 2.082326e-56 | -8.615850e-47 |
| Msa0344570 | Msa1125810 | 0.820239 | 7.617308e-53 | -8.615850e-47 |
| Msa0351770 | Msa1125810 | 0.853600 | 2.146462e-61 | -8.615850e-47 |
| Msa0359250 | Msa1125810 | 0.853838 | 1.833844e-61 | -8.615850e-47 |
| Msa1125810 | Msa1125980 | 0.810263 | 1.257620e-50 | -8.615850e-47 |
| Msa1125810 | Msa1145020 | 0.808418 | 3.128316e-50 | -8.615850e-47 |
| Msa1125810 | Msa1146740 | 0.801544 | 8.565362e-49 | -8.615850e-47 |
| Msa1125810 | Msa1171310 | 0.944242 | 2.793247e-103 | -8.615850e-47 |
| Msa1125810 | Msa1201110 | 0.804335 | 2.269833e-49 | -8.615850e-47 |
| Msa1125810 | Msa1201160 | 0.829600 | 4.700201e-55 | -8.615850e-47 |
| Msa1125810 | Msa1228190 | 0.821975 | 3.034173e-53 | -8.615850e-47 |
| Msa1125810 | Msa1305510 | 0.803235 | 3.840986e-49 | -8.615850e-47 |
| Msa1125810 | Msa1378870 | 0.843677 | 1.209258e-58 | -8.615850e-47 |
| Msa1125810 | Msa1389050 | 0.800701 | 1.273944e-48 | -8.615850e-47 |
| Msa1125810 | Msa1394890 | 0.814348 | 1.612933e-51 | -8.615850e-47 |
| Msa1125810 | Msa1406780 | 0.822034 | 2.939196e-53 | -8.615850e-47 |
| Msa1125810 | Msa1421550 | 0.830677 | 2.566640e-55 | -8.615850e-47 |
| Msa1125810 | Msa1423460 | 0.805063 | 1.599233e-49 | -8.615850e-47 |
| Msa1125810 | Msa1431850 | 0.826946 | 2.051777e-54 | -8.615850e-47 |
| Msa1125810 | Msa1435480 | 0.832702 | 8.130073e-56 | -8.615850e-47 |
| Msa1125810 | Msa1458910 | 0.800787 | 1.223561e-48 | -8.615850e-47 |
| Msa1125810 | Msa1459530 | 0.802242 | 6.155574e-49 | -8.615850e-47 |
| Msa0487570 | Msa1125810 | 0.822732 | 2.023499e-53 | -8.615850e-47 |
| Msa0487630 | Msa1125810 | 0.817871 | 2.632908e-52 | -8.615850e-47 |
| Msa0492190 | Msa1125810 | 0.836110 | 1.133538e-56 | -8.615850e-47 |
| Msa0515950 | Msa1125810 | 0.823931 | 1.061596e-53 | -8.615850e-47 |
| Msa0523000 | Msa1125810 | 0.812416 | 4.286326e-51 | -8.615850e-47 |
| Msa0534930 | Msa1125810 | 0.833615 | 4.818077e-56 | -8.615850e-47 |
| Msa0535040 | Msa1125810 | 0.807524 | 4.846475e-50 | -8.615850e-47 |
| Msa0591790 | Msa1125810 | 0.849036 | 4.182884e-60 | -8.615850e-47 |
| Msa0591800 | Msa1125810 | 0.823474 | 1.358607e-53 | -8.615850e-47 |
| Msa0594090 | Msa1125810 | 0.809384 | 1.942996e-50 | -8.615850e-47 |
| Msa0845940 | Msa1125810 | 0.800462 | 1.425094e-48 | -8.615850e-47 |
| Msa0860160 | Msa1125810 | 0.836208 | 1.070571e-56 | -8.615850e-47 |
| Msa0860170 | Msa1125810 | 0.813544 | 2.426200e-51 | -8.615850e-47 |
| Msa0860280 | Msa1125810 | 0.810953 | 8.920153e-51 | -8.615850e-47 |
| Msa0867350 | Msa1125810 | 0.805338 | 1.400791e-49 | -8.615850e-47 |
| Msa0896350 | Msa1125810 | 0.828479 | 8.786181e-55 | -8.615850e-47 |
| Msa0898730 | Msa1125810 | 0.812479 | 4.151917e-51 | -8.615850e-47 |
| Msa0916640 | Msa1125810 | 0.808702 | 2.720515e-50 | -8.615850e-47 |
| Msa0922750 | Msa1125810 | 0.832338 | 1.000818e-55 | -8.615850e-47 |
| Msa0929870 | Msa1125810 | 0.805357 | 1.388094e-49 | -8.615850e-47 |
| Msa0941820 | Msa1125810 | 0.820387 | 7.048030e-53 | -8.615850e-47 |
| Msa0944760 | Msa1125810 | 0.801109 | 1.051198e-48 | -8.615850e-47 |
| Msa0953540 | Msa1125810 | 0.816946 | 4.254200e-52 | -8.615850e-47 |
| Msa0961560 | Msa1125810 | 0.831703 | 1.436586e-55 | -8.615850e-47 |
| Msa0965310 | Msa1125810 | 0.816757 | 4.691356e-52 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1125810 | MtrunA17_Chr7g0266601 | 93.038 | 316 | 16 | 3 | 1 | 311 | 1 | 315 | 0.0 | 551 |
| Msa1125810 | MtrunA17_Chr1g0178441 | 52.212 | 452 | 199 | 8 | 9 | 449 | 18 | 463 | 8.92e-163 | 468 |
| Msa1125810 | MtrunA17_Chr7g0266591 | 96.053 | 152 | 6 | 0 | 305 | 456 | 6 | 157 | 1.92e-107 | 315 |
| Msa1125810 | MtrunA17_Chr1g0178421 | 56.634 | 309 | 119 | 6 | 5 | 307 | 3 | 302 | 4.29e-104 | 312 |
| Msa1125810 | MtrunA17_Chr1g0178431 | 78.986 | 138 | 27 | 1 | 305 | 440 | 6 | 143 | 4.66e-78 | 239 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1125810 | AT3G52610.1 | 46.253 | 467 | 222 | 12 | 9 | 452 | 13 | 473 | 8.85e-139 | 407 |
Find 102 sgRNAs with CRISPR-Local
Find 169 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CACCTTCAAATTTACGATTA+TGG | 0.178265 | 7_3:-77281987 | Msa1125810:three_prime_UTR |
| CCTCTCTCAAATCACAATTT+TGG | 0.217496 | 7_3:-77283469 | Msa1125810:intron |
| TCATGGTTTGGGACCATCTA+TGG | 0.223620 | 7_3:-77282168 | Msa1125810:CDS |
| ATGGGGTGTGCTTCGGTTCA+TGG | 0.237066 | 7_3:-77282185 | Msa1125810:CDS |
| TGTGCTTCGGTTCATGGTTT+GGG | 0.291835 | 7_3:-77282179 | Msa1125810:CDS |
| AATAACTGCAGCGGGATTAA+TGG | 0.304334 | 7_3:-77283569 | Msa1125810:CDS |
| GTGTGCTTCGGTTCATGGTT+TGG | 0.307756 | 7_3:-77282180 | Msa1125810:CDS |
| GTCCTCAAACACCGACATTA+TGG | 0.308407 | 7_3:+77282262 | None:intergenic |
| GCGATTGAGGATCTTGTTCC+TGG | 0.311297 | 7_3:-77284014 | Msa1125810:CDS |
| TACTTCATCATATGCATGTT+TGG | 0.345683 | 7_3:-77281939 | Msa1125810:three_prime_UTR |
| CGACATTATGGATGTTCTTA+AGG | 0.349557 | 7_3:+77282274 | None:intergenic |
| TGTTAATAAGCTCTTGCATT+TGG | 0.357546 | 7_3:+77282072 | None:intergenic |
| GCAAAGGGAAGAAACATATC+TGG | 0.359281 | 7_3:-77283989 | Msa1125810:CDS |
| TGAAAACGAGAAATATCAAT+AGG | 0.367993 | 7_3:+77284470 | None:intergenic |
| GAACTAGCCAAGAGGACTTA+TGG | 0.372116 | 7_3:-77282398 | Msa1125810:CDS |
| ATCTAGCCTTCCATCCCTTA+TGG | 0.374376 | 7_3:+77282133 | None:intergenic |
| ATCCATAATGTCGGTGTTTG+AGG | 0.408361 | 7_3:-77282264 | Msa1125810:CDS |
| ACCAGGGTTCTCTATGGCCT+TGG | 0.408629 | 7_3:+77282307 | None:intergenic |
| AGTAAACCTAAAAGAATTAA+CGG | 0.410580 | 7_3:+77283938 | None:intergenic |
| ATCCATCCCCGTTGCACTCT+AGG | 0.410966 | 7_3:-77282097 | Msa1125810:CDS |
| TTTGGTCCCTAGAGTGCAAC+GGG | 0.411997 | 7_3:+77282090 | None:intergenic |
| TACGATCTTGCCACGTGTTA+CGG | 0.414492 | 7_3:+77284234 | None:intergenic |
| CTTATCATTGTTCTTAGAGT+TGG | 0.418380 | 7_3:+77282367 | None:intergenic |
| TTATTACCCTCACTGATTGC+CGG | 0.431014 | 7_3:-77283507 | Msa1125810:CDS |
| TGTCAAACCAGGGTTCTCTA+TGG | 0.431401 | 7_3:+77282301 | None:intergenic |
| CACTCCGTTGCAACAAATCA+TGG | 0.432383 | 7_3:-77284270 | Msa1125810:CDS |
| TGTTGAGGATGTTGTTCCTT+TGG | 0.434930 | 7_3:-77284036 | Msa1125810:CDS |
| CTTAAGGATGATGTCAAACC+AGG | 0.439362 | 7_3:+77282290 | None:intergenic |
| ATGAAGGCTATTCTTATTGA+AGG | 0.442750 | 7_3:-77282047 | Msa1125810:CDS |
| AGCCATAATCGTAAATTTGA+AGG | 0.446489 | 7_3:+77281985 | None:intergenic |
| AAAGCCATTCGTGGTGGCAC+TGG | 0.454895 | 7_3:-77284524 | Msa1125810:CDS |
| TGTTGTTCCTTTGGCGATTG+AGG | 0.458789 | 7_3:-77284027 | Msa1125810:CDS |
| AGGAGTGTGGGATGTAAGAA+AGG | 0.459967 | 7_3:+77284358 | None:intergenic |
| CATGGTTTGGGACCATCTAT+GGG | 0.463005 | 7_3:-77282167 | Msa1125810:CDS |
| GGACTACATGGGGTGTGCTT+CGG | 0.472358 | 7_3:-77282192 | Msa1125810:CDS |
| AAGAATAGTTCTAAGAAGTA+CGG | 0.474242 | 7_3:-77283532 | Msa1125810:CDS |
| TCAACAACCACGTGATCAAA+GGG | 0.475334 | 7_3:-77282436 | Msa1125810:CDS |
| TCCATCCCCGTTGCACTCTA+GGG | 0.489654 | 7_3:-77282096 | Msa1125810:CDS |
| AAATGCTCCATAAGTCCTCT+TGG | 0.502139 | 7_3:+77282391 | None:intergenic |
| TGTTTCTTCCCTTTGCGACC+AGG | 0.508762 | 7_3:+77283996 | None:intergenic |
| ATGTCGACGGTTGAAACAAA+AGG | 0.509382 | 7_3:-77284581 | Msa1125810:CDS |
| TCCCTAGAGTGCAACGGGGA+TGG | 0.509671 | 7_3:+77282095 | None:intergenic |
| TTCAGGGTTGTAAGCAGAGT+AGG | 0.515071 | 7_3:-77283609 | Msa1125810:intron |
| ATCTTGTTCCTGGTCGCAAA+GGG | 0.516393 | 7_3:-77284004 | Msa1125810:CDS |
| CTCAACAACCACGTGATCAA+AGG | 0.519923 | 7_3:-77282437 | Msa1125810:CDS |
| GCAACAAGAGGTTGGAGTAG+AGG | 0.526477 | 7_3:-77282213 | Msa1125810:CDS |
| GGAGAATGTTGTTGCTGTTG+AGG | 0.528626 | 7_3:-77284051 | Msa1125810:CDS |
| CTTTGATCACGTGGTTGTTG+AGG | 0.530369 | 7_3:+77282438 | None:intergenic |
| AGAATAGTTCTAAGAAGTAC+GGG | 0.531546 | 7_3:-77283531 | Msa1125810:CDS |
| AATGCCAGTGCCACCACGAA+TGG | 0.537676 | 7_3:+77284520 | None:intergenic |
| TTGACACCATAAGGGATGGA+AGG | 0.538475 | 7_3:-77282139 | Msa1125810:CDS |
| AGAGCTTATTAACAAGATGA+AGG | 0.539515 | 7_3:-77282063 | Msa1125810:CDS |
| GATCTTGTTCCTGGTCGCAA+AGG | 0.543662 | 7_3:-77284005 | Msa1125810:CDS |
| TGTGGAGCAATAACTGCAGC+GGG | 0.545669 | 7_3:-77283577 | Msa1125810:CDS |
| AAGGCTATTCTTATTGAAGG+TGG | 0.558507 | 7_3:-77282044 | Msa1125810:CDS |
| GAAACAAAAGGTCGTAATGT+TGG | 0.558743 | 7_3:-77284569 | Msa1125810:CDS |
| CATGAACTTTCTTATGTCCA+AGG | 0.562719 | 7_3:-77282324 | Msa1125810:CDS |
| AAAGGAGAAAATAGTGTCTG+TGG | 0.563282 | 7_3:+77284376 | None:intergenic |
| AATTGTGATTTGAGAGAGGT+GGG | 0.571654 | 7_3:+77283473 | None:intergenic |
| TGTTCCATGATTTGTTGCAA+CGG | 0.573358 | 7_3:+77284266 | None:intergenic |
| GGTTGGAGTAGAGGACTACA+TGG | 0.579061 | 7_3:-77282204 | Msa1125810:CDS |
| GGCAAGATGCAACAAGAGGT+TGG | 0.579461 | 7_3:-77282221 | Msa1125810:CDS |
| GAGGACACGGTGGTTGATGA+CGG | 0.580211 | 7_3:-77282245 | Msa1125810:CDS |
| AAATTGTGATTTGAGAGAGG+TGG | 0.580439 | 7_3:+77283472 | None:intergenic |
| TAGCTTAAGTATTATGTCGA+CGG | 0.581330 | 7_3:-77284594 | None:intergenic |
| CAAAGGGAAGAAACATATCT+GGG | 0.581978 | 7_3:-77283988 | Msa1125810:CDS |
| CCAAAATTGTGATTTGAGAG+AGG | 0.582441 | 7_3:+77283469 | None:intergenic |
| TGAGAGAGGTGGGTCAAGAG+TGG | 0.586797 | 7_3:+77283483 | None:intergenic |
| AGCTGGTGCAAAGCCATTCG+TGG | 0.588805 | 7_3:-77284533 | Msa1125810:CDS |
| GATCACGTGGTTGTTGAGGA+TGG | 0.593465 | 7_3:+77282442 | None:intergenic |
| AAACATGTCAGTATCAATAC+CGG | 0.597857 | 7_3:+77284211 | None:intergenic |
| ACAAAAGGTCGTAATGTTGG+TGG | 0.598123 | 7_3:-77284566 | Msa1125810:CDS |
| TTGGTGGCACAGAATGTAGC+TGG | 0.609381 | 7_3:-77284550 | Msa1125810:CDS |
| CTTAAGAACATCCATAATGT+CGG | 0.610419 | 7_3:-77282273 | Msa1125810:CDS |
| AAATGCTAGGTCTTCACAAG+TGG | 0.613957 | 7_3:-77283892 | Msa1125810:CDS |
| AATGTCGGTGTTTGAGGACA+CGG | 0.619648 | 7_3:-77282258 | Msa1125810:CDS |
| ATTTGGTCCCTAGAGTGCAA+CGG | 0.621651 | 7_3:+77282089 | None:intergenic |
| ACAAGATCCTCAATCGCCAA+AGG | 0.623888 | 7_3:+77284020 | None:intergenic |
| AGTGGACCGGCAATCAGTGA+GGG | 0.635780 | 7_3:+77283501 | None:intergenic |
| GTGTGGAGCAATAACTGCAG+CGG | 0.636382 | 7_3:-77283578 | Msa1125810:CDS |
| AACACGTGGCAAGATCGTAC+CGG | 0.650719 | 7_3:-77284230 | Msa1125810:CDS |
| AAGAAACATATCTGGGAGCG+TGG | 0.650935 | 7_3:-77283981 | Msa1125810:CDS |
| CAATCAAACTGATACCAAGA+GGG | 0.655063 | 7_3:-77283856 | Msa1125810:CDS |
| TCCAAGGCCATAGAGAACCC+TGG | 0.655783 | 7_3:-77282308 | Msa1125810:CDS |
| AACAACCACGTGATCAAAGG+GGG | 0.655827 | 7_3:-77282434 | Msa1125810:CDS |
| CGGCGGCAAGATGCAACAAG+AGG | 0.657442 | 7_3:-77282225 | Msa1125810:CDS |
| GTTGGAGTAGAGGACTACAT+GGG | 0.661686 | 7_3:-77282203 | Msa1125810:CDS |
| TCAATCAAACTGATACCAAG+AGG | 0.661853 | 7_3:-77283857 | Msa1125810:CDS |
| GCTTGTGTTGATGAAAGATG+AGG | 0.663457 | 7_3:-77284081 | Msa1125810:CDS |
| GAGTGGACCGGCAATCAGTG+AGG | 0.664520 | 7_3:+77283500 | None:intergenic |
| CAGAGTAGGATTAAGCTGTG+TGG | 0.667291 | 7_3:-77283595 | Msa1125810:CDS |
| GAGGTGGGTCAAGAGTGGAC+CGG | 0.670737 | 7_3:+77283488 | None:intergenic |
| TTAAGGATGATGTCAAACCA+GGG | 0.675705 | 7_3:+77282291 | None:intergenic |
| ATGAACTGAACCGTAACACG+TGG | 0.676263 | 7_3:-77284244 | Msa1125810:CDS |
| TGGTGCAAAGCCATTCGTGG+TGG | 0.684258 | 7_3:-77284530 | Msa1125810:CDS |
| GTCTTTGGGAACTAGCCAAG+AGG | 0.697035 | 7_3:-77282406 | Msa1125810:CDS |
| CAACAACCACGTGATCAAAG+GGG | 0.713289 | 7_3:-77282435 | Msa1125810:CDS |
| TTGGAGTAGAGGACTACATG+GGG | 0.733565 | 7_3:-77282202 | Msa1125810:CDS |
| GACACGGTGGTTGATGACGG+CGG | 0.738900 | 7_3:-77282242 | Msa1125810:CDS |
| AGCATGCGATAGAACAACTG+CGG | 0.738953 | 7_3:-77284123 | Msa1125810:CDS |
| GTCGGTGTTTGAGGACACGG+TGG | 0.755614 | 7_3:-77282255 | Msa1125810:CDS |
| TTGGTCCCTAGAGTGCAACG+GGG | 0.825259 | 7_3:+77282091 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | CATACAAATATCAAATTAAT+TGG | + | chr7_3:77282804-77282823 | None:intergenic | 15.0% |
| !!! | ACTTTTGAATGATTTTTTTA+AGG | - | chr7_3:77283276-77283295 | Msa1125810:intron | 15.0% |
| !! | TAAATTAACACTTTACATAT+AGG | + | chr7_3:77283796-77283815 | None:intergenic | 15.0% |
| !!! | TTAAAAGTTTTTCTTTTTGA+AGG | - | chr7_3:77283813-77283832 | Msa1125810:intron | 15.0% |
| !! | AGTAAACCTAAAAGAATTAA+CGG | + | chr7_3:77282517-77282536 | None:intergenic | 20.0% |
| !! | TTAATGATACAAAAAATGCT+AGG | - | chr7_3:77282547-77282566 | Msa1125810:intron | 20.0% |
| !! | ACCAAACATAAAATAGATTA+GGG | + | chr7_3:77282637-77282656 | None:intergenic | 20.0% |
| !! | AACCAAACATAAAATAGATT+AGG | + | chr7_3:77282638-77282657 | None:intergenic | 20.0% |
| !!! | TAATCTATTTTATGTTTGGT+TGG | - | chr7_3:77282637-77282656 | Msa1125810:intron | 20.0% |
| !!! | CTCATATATATGTTTGATTT+TGG | + | chr7_3:77282760-77282779 | None:intergenic | 20.0% |
| !! | TGAAATGAAATTTGTATTTC+AGG | - | chr7_3:77282826-77282845 | Msa1125810:intron | 20.0% |
| !! | GAAATGAAATTTGTATTTCA+GGG | - | chr7_3:77282827-77282846 | Msa1125810:intron | 20.0% |
| !! | TAGAACCATTAATATGTATA+TGG | - | chr7_3:77283095-77283114 | Msa1125810:intron | 20.0% |
| !! | AAATGTTAACAAATGTCTAT+AGG | + | chr7_3:77283684-77283703 | None:intergenic | 20.0% |
| !! | GATGATTTAGAAATATTGAT+AGG | - | chr7_3:77283951-77283970 | Msa1125810:CDS | 20.0% |
| ! | TGAAAACGAGAAATATCAAT+AGG | + | chr7_3:77281985-77282004 | None:intergenic | 25.0% |
| !!! | TTTGTTTTTTGCAAGAATGT+TGG | + | chr7_3:77282157-77282176 | None:intergenic | 25.0% |
| !!! | AAGAATAGTTCTAAGAAGTA+CGG | - | chr7_3:77282920-77282939 | Msa1125810:intron | 25.0% |
| !! | GAGAACAGAAAATTGATTTA+TGG | - | chr7_3:77283048-77283067 | Msa1125810:intron | 25.0% |
| ! | CACTTCCATATACATATTAA+TGG | + | chr7_3:77283103-77283122 | None:intergenic | 25.0% |
| ! | CATTAATATGTATATGGAAG+TGG | - | chr7_3:77283101-77283120 | Msa1125810:intron | 25.0% |
| ! | AATAAGGAATGAATGTTGAT+TGG | + | chr7_3:77283150-77283169 | None:intergenic | 25.0% |
| !! | AGTTTTTCTTTTCACGAATA+AGG | + | chr7_3:77283166-77283185 | None:intergenic | 25.0% |
| ! | TCCACTAACAAAAAAAAAAG+AGG | - | chr7_3:77283545-77283564 | Msa1125810:CDS | 25.0% |
| ! | CCACTAACAAAAAAAAAAGA+GGG | - | chr7_3:77283546-77283565 | Msa1125810:CDS | 25.0% |
| ! | AAACGACTCTTTCAATTTAA+TGG | + | chr7_3:77283606-77283625 | None:intergenic | 25.0% |
| !!! | AAGTTTTTCTTTTTGAAGGA+AGG | - | chr7_3:77283817-77283836 | Msa1125810:intron | 25.0% |
| !! | ATTTTGTAGTTTGTGAAGTG+AGG | + | chr7_3:77282010-77282029 | None:intergenic | 30.0% |
| AAACATGTCAGTATCAATAC+CGG | + | chr7_3:77282244-77282263 | None:intergenic | 30.0% | |
| TATGCCTGATGAAAAAACAT+GGG | - | chr7_3:77282281-77282300 | Msa1125810:CDS | 30.0% | |
| ! | GTTACTCCGTTAATTCTTTT+AGG | - | chr7_3:77282508-77282527 | Msa1125810:intron | 30.0% |
| !! | TTTTACATCTAAAACCCTCT+TGG | + | chr7_3:77282613-77282632 | None:intergenic | 30.0% |
| ! | GCCCTAATCTATTTTATGTT+TGG | - | chr7_3:77282633-77282652 | Msa1125810:intron | 30.0% |
| ! | ATGCAGTTTTTGCAAAATCA+TGG | + | chr7_3:77282700-77282719 | None:intergenic | 30.0% |
| !! | AGAATAGTTCTAAGAAGTAC+GGG | - | chr7_3:77282921-77282940 | Msa1125810:intron | 30.0% |
| ! | CATTTAAGATGAGATAGAGA+GGG | + | chr7_3:77283383-77283402 | None:intergenic | 30.0% |
| ! | TCATTTAAGATGAGATAGAG+AGG | + | chr7_3:77283384-77283403 | None:intergenic | 30.0% |
| !!! | TTTTTTGTTAGTGGATGAAG+TGG | + | chr7_3:77283540-77283559 | None:intergenic | 30.0% |
| !!! | CCCTCTTTTTTTTTTGTTAG+TGG | + | chr7_3:77283549-77283568 | None:intergenic | 30.0% |
| GTGCATATGTTTCAATGTAT+AGG | - | chr7_3:77283973-77283992 | Msa1125810:CDS | 30.0% | |
| CTTATCATTGTTCTTAGAGT+TGG | + | chr7_3:77284088-77284107 | None:intergenic | 30.0% | |
| CTTAAGAACATCCATAATGT+CGG | - | chr7_3:77284179-77284198 | Msa1125810:CDS | 30.0% | |
| TGTTAATAAGCTCTTGCATT+TGG | + | chr7_3:77284383-77284402 | None:intergenic | 30.0% | |
| AGAGCTTATTAACAAGATGA+AGG | - | chr7_3:77284389-77284408 | Msa1125810:CDS | 30.0% | |
| ATGAAGGCTATTCTTATTGA+AGG | - | chr7_3:77284405-77284424 | Msa1125810:CDS | 30.0% | |
| CACCTTCAAATTTACGATTA+TGG | - | chr7_3:77284465-77284484 | Msa1125810:CDS | 30.0% | |
| AGCCATAATCGTAAATTTGA+AGG | + | chr7_3:77284470-77284489 | None:intergenic | 30.0% | |
| TACTTCATCATATGCATGTT+TGG | - | chr7_3:77284513-77284532 | Msa1125810:CDS | 30.0% | |
| GAAACAAAAGGTCGTAATGT+TGG | - | chr7_3:77281883-77281902 | Msa1125810:three_prime_UTR | 35.0% | |
| ! | TTTTGATCTGAGGATAGGAT+GGG | + | chr7_3:77282034-77282053 | None:intergenic | 35.0% |
| AAAGGAGAAAATAGTGTCTG+TGG | + | chr7_3:77282079-77282098 | None:intergenic | 35.0% | |
| !! | GATTTTGATGAAAGGAGTGT+GGG | + | chr7_3:77282109-77282128 | None:intergenic | 35.0% |
| !! | TGAGACTCGATTTTGATGAA+AGG | + | chr7_3:77282117-77282136 | None:intergenic | 35.0% |
| !! | TGTTCCATGATTTGTTGCAA+CGG | + | chr7_3:77282189-77282208 | None:intergenic | 35.0% |
| CTATGCCTGATGAAAAAACA+TGG | - | chr7_3:77282280-77282299 | Msa1125810:CDS | 35.0% | |
| GATGAAAGATGAGGAAAAAG+AGG | - | chr7_3:77282380-77282399 | Msa1125810:CDS | 35.0% | |
| CAAAGGGAAGAAACATATCT+GGG | - | chr7_3:77282464-77282483 | Msa1125810:intron | 35.0% | |
| TCAATCAAACTGATACCAAG+AGG | - | chr7_3:77282595-77282614 | Msa1125810:intron | 35.0% | |
| CAATCAAACTGATACCAAGA+GGG | - | chr7_3:77282596-77282615 | Msa1125810:intron | 35.0% | |
| CATCGTACAAGATTAAGTAC+CGG | - | chr7_3:77282668-77282687 | Msa1125810:intron | 35.0% | |
| ATCGTACAAGATTAAGTACC+GGG | - | chr7_3:77282669-77282688 | Msa1125810:intron | 35.0% | |
| AATTGTGATTTGAGAGAGGT+GGG | + | chr7_3:77282982-77283001 | None:intergenic | 35.0% | |
| AAATTGTGATTTGAGAGAGG+TGG | + | chr7_3:77282983-77283002 | None:intergenic | 35.0% | |
| CCAAAATTGTGATTTGAGAG+AGG | + | chr7_3:77282986-77283005 | None:intergenic | 35.0% | |
| ! | CCTCTCTCAAATCACAATTT+TGG | - | chr7_3:77282983-77283002 | Msa1125810:intron | 35.0% |
| TATGTATATGGAAGTGGAAG+TGG | - | chr7_3:77283107-77283126 | Msa1125810:intron | 35.0% | |
| ! | AGGAATGAATGTTGATTGGT+CGG | + | chr7_3:77283146-77283165 | None:intergenic | 35.0% |
| TAAATTCGCACGCAATTGTA+AGG | + | chr7_3:77283507-77283526 | None:intergenic | 35.0% | |
| ATCAATTTCCTTGATACACG+AGG | - | chr7_3:77283740-77283759 | Msa1125810:intron | 35.0% | |
| ! | TGATAAGCACTTTTCAGACA+TGG | - | chr7_3:77284101-77284120 | Msa1125810:CDS | 35.0% |
| CATGAACTTTCTTATGTCCA+AGG | - | chr7_3:77284128-77284147 | Msa1125810:CDS | 35.0% | |
| TTAAGGATGATGTCAAACCA+GGG | + | chr7_3:77284164-77284183 | None:intergenic | 35.0% | |
| CGACATTATGGATGTTCTTA+AGG | + | chr7_3:77284181-77284200 | None:intergenic | 35.0% | |
| GTGTCAAAAATACCCATAGA+TGG | + | chr7_3:77284300-77284319 | None:intergenic | 35.0% | |
| !! | TGGGTATTTTTGACACCATA+AGG | - | chr7_3:77284304-77284323 | Msa1125810:CDS | 35.0% |
| !! | GGGTATTTTTGACACCATAA+GGG | - | chr7_3:77284305-77284324 | Msa1125810:CDS | 35.0% |
| ! | ATTTTTGACACCATAAGGGA+TGG | - | chr7_3:77284309-77284328 | Msa1125810:CDS | 35.0% |
| AAGGCTATTCTTATTGAAGG+TGG | - | chr7_3:77284408-77284427 | Msa1125810:CDS | 35.0% | |
| ATGTCGACGGTTGAAACAAA+AGG | - | chr7_3:77281871-77281890 | Msa1125810:three_prime_UTR | 40.0% | |
| ACAAAAGGTCGTAATGTTGG+TGG | - | chr7_3:77281886-77281905 | Msa1125810:three_prime_UTR | 40.0% | |
| !! | GTTTTGATCTGAGGATAGGA+TGG | + | chr7_3:77282035-77282054 | None:intergenic | 40.0% |
| !! | TGGAGTTTTGATCTGAGGAT+AGG | + | chr7_3:77282039-77282058 | None:intergenic | 40.0% |
| !! | ATGTGTGGAGTTTTGATCTG+AGG | + | chr7_3:77282044-77282063 | None:intergenic | 40.0% |
| ! | TGGATGATGATGATGATGTG+TGG | + | chr7_3:77282059-77282078 | None:intergenic | 40.0% |
| !! | CGATTTTGATGAAAGGAGTG+TGG | + | chr7_3:77282110-77282129 | None:intergenic | 40.0% |
| !!! | ACCACCCATGTTTTTTCATC+AGG | + | chr7_3:77282288-77282307 | None:intergenic | 40.0% |
| TGATGAAAAAACATGGGTGG+TGG | - | chr7_3:77282287-77282306 | Msa1125810:CDS | 40.0% | |
| ! | GCTTGTGTTGATGAAAGATG+AGG | - | chr7_3:77282371-77282390 | Msa1125810:CDS | 40.0% |
| TGTTGAGGATGTTGTTCCTT+TGG | - | chr7_3:77282416-77282435 | Msa1125810:CDS | 40.0% | |
| GCAAAGGGAAGAAACATATC+TGG | - | chr7_3:77282463-77282482 | Msa1125810:intron | 40.0% | |
| AAATGCTAGGTCTTCACAAG+TGG | - | chr7_3:77282560-77282579 | Msa1125810:intron | 40.0% | |
| TGCAAAATCATGGTGATTCC+CGG | + | chr7_3:77282690-77282709 | None:intergenic | 40.0% | |
| AATAACTGCAGCGGGATTAA+TGG | - | chr7_3:77282883-77282902 | Msa1125810:intron | 40.0% | |
| ! | TTATTACCCTCACTGATTGC+CGG | - | chr7_3:77282945-77282964 | Msa1125810:intron | 40.0% |
| AGAAAAACTAACTCTGCAGC+TGG | - | chr7_3:77283177-77283196 | Msa1125810:intron | 40.0% | |
| CAAAGTAACCTCGTGTATCA+AGG | + | chr7_3:77283751-77283770 | None:intergenic | 40.0% | |
| CTTGATACACGAGGTTACTT+TGG | - | chr7_3:77283749-77283768 | Msa1125810:intron | 40.0% | |
| TCAACAACCACGTGATCAAA+GGG | - | chr7_3:77284016-77284035 | Msa1125810:CDS | 40.0% | |
| AAATGCTCCATAAGTCCTCT+TGG | + | chr7_3:77284064-77284083 | None:intergenic | 40.0% | |
| CTTAAGGATGATGTCAAACC+AGG | + | chr7_3:77284165-77284184 | None:intergenic | 40.0% | |
| ! | ATCCATAATGTCGGTGTTTG+AGG | - | chr7_3:77284188-77284207 | Msa1125810:CDS | 40.0% |
| TGAAGGTGGAAAAACATACG+AGG | - | chr7_3:77284422-77284441 | Msa1125810:CDS | 40.0% | |
| ! | AGGAGTGTGGGATGTAAGAA+AGG | + | chr7_3:77282097-77282116 | None:intergenic | 45.0% |
| CACTCCGTTGCAACAAATCA+TGG | - | chr7_3:77282182-77282201 | Msa1125810:CDS | 45.0% | |
| ATGAACTGAACCGTAACACG+TGG | - | chr7_3:77282208-77282227 | Msa1125810:CDS | 45.0% | |
| TACGATCTTGCCACGTGTTA+CGG | + | chr7_3:77282221-77282240 | None:intergenic | 45.0% | |
| GCCTGATGAAAAAACATGGG+TGG | - | chr7_3:77282284-77282303 | Msa1125810:CDS | 45.0% | |
| AGCATGCGATAGAACAACTG+CGG | - | chr7_3:77282329-77282348 | Msa1125810:CDS | 45.0% | |
| ! | GGAGAATGTTGTTGCTGTTG+AGG | - | chr7_3:77282401-77282420 | Msa1125810:CDS | 45.0% |
| TGTTGTTCCTTTGGCGATTG+AGG | - | chr7_3:77282425-77282444 | Msa1125810:CDS | 45.0% | |
| ACAAGATCCTCAATCGCCAA+AGG | + | chr7_3:77282435-77282454 | None:intergenic | 45.0% | |
| ATCTTGTTCCTGGTCGCAAA+GGG | - | chr7_3:77282448-77282467 | Msa1125810:CDS | 45.0% | |
| AAGAAACATATCTGGGAGCG+TGG | - | chr7_3:77282471-77282490 | Msa1125810:intron | 45.0% | |
| TTCAGGGTTGTAAGCAGAGT+AGG | - | chr7_3:77282843-77282862 | Msa1125810:intron | 45.0% | |
| CAGAGTAGGATTAAGCTGTG+TGG | - | chr7_3:77282857-77282876 | Msa1125810:intron | 45.0% | |
| GCAAGCAAAACTTTGCGTAC+AGG | - | chr7_3:77283232-77283251 | Msa1125810:intron | 45.0% | |
| CTTTGATCACGTGGTTGTTG+AGG | + | chr7_3:77284017-77284036 | None:intergenic | 45.0% | |
| CTCAACAACCACGTGATCAA+AGG | - | chr7_3:77284015-77284034 | Msa1125810:CDS | 45.0% | |
| CAACAACCACGTGATCAAAG+GGG | - | chr7_3:77284017-77284036 | Msa1125810:CDS | 45.0% | |
| AACAACCACGTGATCAAAGG+GGG | - | chr7_3:77284018-77284037 | Msa1125810:CDS | 45.0% | |
| TCAAAGGGGGAGAAAGTCTT+TGG | - | chr7_3:77284031-77284050 | Msa1125810:CDS | 45.0% | |
| CAAAGGGGGAGAAAGTCTTT+GGG | - | chr7_3:77284032-77284051 | Msa1125810:CDS | 45.0% | |
| GAACTAGCCAAGAGGACTTA+TGG | - | chr7_3:77284054-77284073 | Msa1125810:CDS | 45.0% | |
| TGTCAAACCAGGGTTCTCTA+TGG | + | chr7_3:77284154-77284173 | None:intergenic | 45.0% | |
| GTCCTCAAACACCGACATTA+TGG | + | chr7_3:77284193-77284212 | None:intergenic | 45.0% | |
| ! | AATGTCGGTGTTTGAGGACA+CGG | - | chr7_3:77284194-77284213 | Msa1125810:CDS | 45.0% |
| GTTGGAGTAGAGGACTACAT+GGG | - | chr7_3:77284249-77284268 | Msa1125810:CDS | 45.0% | |
| TTGGAGTAGAGGACTACATG+GGG | - | chr7_3:77284250-77284269 | Msa1125810:CDS | 45.0% | |
| TGTGCTTCGGTTCATGGTTT+GGG | - | chr7_3:77284273-77284292 | Msa1125810:CDS | 45.0% | |
| ! | TCATGGTTTGGGACCATCTA+TGG | - | chr7_3:77284284-77284303 | Msa1125810:CDS | 45.0% |
| ! | CATGGTTTGGGACCATCTAT+GGG | - | chr7_3:77284285-77284304 | Msa1125810:CDS | 45.0% |
| TTGACACCATAAGGGATGGA+AGG | - | chr7_3:77284313-77284332 | Msa1125810:CDS | 45.0% | |
| ! | ATCTAGCCTTCCATCCCTTA+TGG | + | chr7_3:77284322-77284341 | None:intergenic | 45.0% |
| ATTTGGTCCCTAGAGTGCAA+CGG | + | chr7_3:77284366-77284385 | None:intergenic | 45.0% | |
| ! | TTGGTGGCACAGAATGTAGC+TGG | - | chr7_3:77281902-77281921 | Msa1125810:three_prime_UTR | 50.0% |
| AACACGTGGCAAGATCGTAC+CGG | - | chr7_3:77282222-77282241 | Msa1125810:CDS | 50.0% | |
| GCGATTGAGGATCTTGTTCC+TGG | - | chr7_3:77282438-77282457 | Msa1125810:CDS | 50.0% | |
| GATCTTGTTCCTGGTCGCAA+AGG | - | chr7_3:77282447-77282466 | Msa1125810:CDS | 50.0% | |
| TGTTTCTTCCCTTTGCGACC+AGG | + | chr7_3:77282459-77282478 | None:intergenic | 50.0% | |
| GTGTGGAGCAATAACTGCAG+CGG | - | chr7_3:77282874-77282893 | Msa1125810:intron | 50.0% | |
| TGTGGAGCAATAACTGCAGC+GGG | - | chr7_3:77282875-77282894 | Msa1125810:intron | 50.0% | |
| GATCACGTGGTTGTTGAGGA+TGG | + | chr7_3:77284013-77284032 | None:intergenic | 50.0% | |
| TTTCTCCCCCTTTGATCACG+TGG | + | chr7_3:77284026-77284045 | None:intergenic | 50.0% | |
| ! | GTCTTTGGGAACTAGCCAAG+AGG | - | chr7_3:77284046-77284065 | Msa1125810:CDS | 50.0% |
| GGCAAGATGCAACAAGAGGT+TGG | - | chr7_3:77284231-77284250 | Msa1125810:CDS | 50.0% | |
| GCAACAAGAGGTTGGAGTAG+AGG | - | chr7_3:77284239-77284258 | Msa1125810:CDS | 50.0% | |
| GGTTGGAGTAGAGGACTACA+TGG | - | chr7_3:77284248-77284267 | Msa1125810:CDS | 50.0% | |
| GTGTGCTTCGGTTCATGGTT+TGG | - | chr7_3:77284272-77284291 | Msa1125810:CDS | 50.0% | |
| TTTGGTCCCTAGAGTGCAAC+GGG | + | chr7_3:77284365-77284384 | None:intergenic | 50.0% | |
| AGCTGGTGCAAAGCCATTCG+TGG | - | chr7_3:77281919-77281938 | Msa1125810:three_prime_UTR | 55.0% | |
| TGGTGCAAAGCCATTCGTGG+TGG | - | chr7_3:77281922-77281941 | Msa1125810:three_prime_UTR | 55.0% | |
| AAAGCCATTCGTGGTGGCAC+TGG | - | chr7_3:77281928-77281947 | Msa1125810:three_prime_UTR | 55.0% | |
| AATGCCAGTGCCACCACGAA+TGG | + | chr7_3:77281935-77281954 | None:intergenic | 55.0% | |
| AGTGGACCGGCAATCAGTGA+GGG | + | chr7_3:77282954-77282973 | None:intergenic | 55.0% | |
| TGAGAGAGGTGGGTCAAGAG+TGG | + | chr7_3:77282972-77282991 | None:intergenic | 55.0% | |
| TCCAAGGCCATAGAGAACCC+TGG | - | chr7_3:77284144-77284163 | Msa1125810:CDS | 55.0% | |
| ACCAGGGTTCTCTATGGCCT+TGG | + | chr7_3:77284148-77284167 | None:intergenic | 55.0% | |
| !! | GAGGACACGGTGGTTGATGA+CGG | - | chr7_3:77284207-77284226 | Msa1125810:CDS | 55.0% |
| GGACTACATGGGGTGTGCTT+CGG | - | chr7_3:77284260-77284279 | Msa1125810:CDS | 55.0% | |
| ATGGGGTGTGCTTCGGTTCA+TGG | - | chr7_3:77284267-77284286 | Msa1125810:CDS | 55.0% | |
| ATCCATCCCCGTTGCACTCT+AGG | - | chr7_3:77284355-77284374 | Msa1125810:CDS | 55.0% | |
| TCCATCCCCGTTGCACTCTA+GGG | - | chr7_3:77284356-77284375 | Msa1125810:CDS | 55.0% | |
| TTGGTCCCTAGAGTGCAACG+GGG | + | chr7_3:77284364-77284383 | None:intergenic | 55.0% | |
| GAGTGGACCGGCAATCAGTG+AGG | + | chr7_3:77282955-77282974 | None:intergenic | 60.0% | |
| GAGGTGGGTCAAGAGTGGAC+CGG | + | chr7_3:77282967-77282986 | None:intergenic | 60.0% | |
| ! | GTCGGTGTTTGAGGACACGG+TGG | - | chr7_3:77284197-77284216 | Msa1125810:CDS | 60.0% |
| !! | GACACGGTGGTTGATGACGG+CGG | - | chr7_3:77284210-77284229 | Msa1125810:CDS | 60.0% |
| CGGCGGCAAGATGCAACAAG+AGG | - | chr7_3:77284227-77284246 | Msa1125810:CDS | 60.0% | |
| TCCCTAGAGTGCAACGGGGA+TGG | + | chr7_3:77284360-77284379 | None:intergenic | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7_3 | gene | 77281871 | 77284603 | 77281871 | ID=Msa1125810;Name=Msa1125810 |
| chr7_3 | mRNA | 77281871 | 77284603 | 77281871 | ID=Msa1125810-mRNA-1;Parent=Msa1125810;Name=Msa1125810-mRNA-1;_AED=0.01;_eAED=0.01;_QI=0|0.5|0.33|1|1|1|3|151|456 |
| chr7_3 | exon | 77281871 | 77282479 | 77281871 | ID=Msa1125810-mRNA-1:exon:21260;Parent=Msa1125810-mRNA-1 |
| chr7_3 | exon | 77283470 | 77283626 | 77283470 | ID=Msa1125810-mRNA-1:exon:21259;Parent=Msa1125810-mRNA-1 |
| chr7_3 | exon | 77283848 | 77284603 | 77283848 | ID=Msa1125810-mRNA-1:exon:21258;Parent=Msa1125810-mRNA-1 |
| chr7_3 | CDS | 77283848 | 77284603 | 77283848 | ID=Msa1125810-mRNA-1:cds;Parent=Msa1125810-mRNA-1 |
| chr7_3 | CDS | 77283470 | 77283626 | 77283470 | ID=Msa1125810-mRNA-1:cds;Parent=Msa1125810-mRNA-1 |
| chr7_3 | CDS | 77282022 | 77282479 | 77282022 | ID=Msa1125810-mRNA-1:cds;Parent=Msa1125810-mRNA-1 |
| chr7_3 | three_prime_UTR | 77281871 | 77282021 | 77281871 | ID=Msa1125810-mRNA-1:three_prime_utr;Parent=Msa1125810-mRNA-1 |
| Gene Sequence |
| Protein sequence |
