AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0803630

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0803630 MtrunA17_Chr5g0412271 95.614 228 8 1 1 226 1 228 2.46e-157 434
Msa0803630 MtrunA17_Chr5g0412461 89.427 227 23 1 1 226 1 227 3.83e-147 409
Msa0803630 MtrunA17_Chr5g0427401 53.744 227 100 5 1 225 1 224 1.34e-69 212
Msa0803630 MtrunA17_Chr4g0049901 48.230 226 100 4 1 224 27 237 3.58e-57 181
Msa0803630 MtrunA17_Chr2g0279821 45.455 165 87 2 1 164 1 163 6.18e-39 134
Msa0803630 MtrunA17_Chr4g0049541 37.946 224 133 4 1 223 1 219 7.15e-39 134
Msa0803630 MtrunA17_Chr5g0411691 45.087 173 89 5 1 171 1 169 7.37e-38 132
Msa0803630 MtrunA17_Chr7g0220121 44.767 172 84 4 1 167 1 166 4.59e-36 127
Msa0803630 MtrunA17_Chr2g0284911 37.395 238 133 4 1 225 16 250 1.02e-35 127
Msa0803630 MtrunA17_Chr3g0097101 42.286 175 95 2 1 172 16 187 3.70e-35 125
Msa0803630 MtrunA17_Chr4g0061691 45.029 171 87 4 1 167 1 168 1.14e-34 123
Msa0803630 MtrunA17_Chr8g0351031 38.496 226 123 7 1 223 1 213 1.20e-34 123
Msa0803630 MtrunA17_Chr8g0380021 39.535 172 104 0 1 172 17 188 7.67e-34 121
Msa0803630 MtrunA17_Chr3g0077501 41.146 192 100 4 1 184 1 187 1.73e-33 120
Msa0803630 MtrunA17_Chr5g0420081 42.442 172 98 1 1 171 1 172 1.81e-33 120
Msa0803630 MtrunA17_Chr7g0246431 43.678 174 84 4 1 167 1 167 3.21e-33 119
Msa0803630 MtrunA17_Chr4g0061671 39.535 172 101 2 1 171 1 170 4.15e-33 118
Msa0803630 MtrunA17_Chr4g0057151 42.308 182 95 3 1 177 1 177 6.24e-33 118
Msa0803630 MtrunA17_Chr8g0366231 43.820 178 79 6 1 167 1 168 9.10e-33 119
Msa0803630 MtrunA17_Chr5g0420091 42.353 170 95 3 1 168 1 169 2.48e-32 117
Msa0803630 MtrunA17_Chr8g0351051 39.106 179 97 2 1 173 1 173 1.56e-31 115
Msa0803630 MtrunA17_Chr1g0164791 35.593 236 113 7 1 211 1 222 4.07e-31 114
Msa0803630 MtrunA17_Chr6g0455511 38.119 202 118 4 1 200 1 197 4.81e-31 114
Msa0803630 MtrunA17_Chr8g0351041 41.718 163 90 3 1 160 1 161 1.70e-30 110
Msa0803630 MtrunA17_Chr7g0220111 41.071 168 97 2 1 167 1 167 2.33e-30 112
Msa0803630 MtrunA17_Chr3g0122251 39.130 184 94 3 1 173 1 177 8.66e-30 111
Msa0803630 MtrunA17_Chr3g0125241 41.667 180 86 6 1 172 26 194 1.22e-29 109
Msa0803630 MtrunA17_Chr4g0020221 36.481 233 138 3 1 223 1 233 4.90e-29 109
Msa0803630 MtrunA17_Chr3g0142191 38.308 201 101 5 1 189 1 190 2.95e-27 103
Msa0803630 MtrunA17_Chr6g0474371 39.080 174 94 3 1 167 1 169 3.67e-27 102
Msa0803630 MtrunA17_Chr1g0204111 32.599 227 129 5 1 220 17 226 4.11e-27 104
Msa0803630 MtrunA17_Chr1g0159661 37.870 169 91 4 1 166 1 158 1.97e-25 98.2
Msa0803630 MtrunA17_Chr4g0018421 37.870 169 103 1 1 167 1 169 3.23e-24 95.5
Msa0803630 MtrunA17_Chr1g0173161 72.881 59 16 0 1 59 1 59 1.82e-23 90.1
Msa0803630 MtrunA17_Chr2g0308251 69.492 59 18 0 1 59 1 59 6.00e-23 88.6
Msa0803630 MtrunA17_Chr3g0134451 68.571 70 21 1 1 69 1 70 2.22e-22 93.2
Msa0803630 MtrunA17_Chr5g0404951 37.288 177 92 6 1 167 1 168 5.90e-22 90.1
Msa0803630 MtrunA17_Chr7g0246381 66.102 59 20 0 1 59 1 59 7.11e-21 82.8
Msa0803630 MtrunA17_Chr8g0377561 65.517 58 20 0 1 58 1 58 1.73e-20 82.8
Msa0803630 MtrunA17_Chr5g0427921 62.712 59 22 0 1 59 1 59 2.00e-20 81.6
Msa0803630 MtrunA17_Chr5g0425191 65.517 58 20 0 1 58 1 58 2.29e-19 80.1
Msa0803630 MtrunA17_Chr2g0292791 30.986 213 124 8 3 211 10 203 8.03e-19 82.0
Msa0803630 MtrunA17_Chr4g0044071 62.069 58 22 0 1 58 1 58 1.04e-18 78.6
Msa0803630 MtrunA17_Chr1g0206991 33.333 174 95 6 2 167 9 169 2.26e-18 79.7
Msa0803630 MtrunA17_Chr2g0325971 49.254 67 34 0 3 69 10 76 5.68e-18 79.3
Msa0803630 MtrunA17_Chr1g0208561 48.529 68 35 0 2 69 9 76 6.56e-18 79.3
Msa0803630 MtrunA17_Chr3g0099421 30.516 213 121 7 3 209 35 226 7.90e-18 79.7
Msa0803630 MtrunA17_Chr3g0089141 48.529 68 35 0 2 69 9 76 8.14e-18 79.0
Msa0803630 MtrunA17_Chr1g0206721 35.556 135 71 4 2 132 9 131 1.15e-17 79.0
Msa0803630 MtrunA17_Chr8g0355091 35.556 135 71 5 2 132 9 131 2.53e-17 77.8
Msa0803630 MtrunA17_Chr3g0099411 50.000 68 34 0 2 69 9 76 4.58e-17 77.0
Msa0803630 MtrunA17_Chr1g0206701 50.000 68 34 0 2 69 9 76 7.33e-17 76.6
Msa0803630 MtrunA17_Chr1g0208581 50.000 66 33 0 3 68 10 75 7.62e-17 76.6
Msa0803630 MtrunA17_Chr1g0166611 58.065 62 24 1 13 74 17 76 7.78e-17 74.3
Msa0803630 MtrunA17_Chr1g0187361 48.529 68 35 0 2 69 9 76 2.23e-16 75.5
Msa0803630 MtrunA17_Chr1g0149391 53.623 69 31 1 3 71 10 77 2.59e-16 75.1
Msa0803630 MtrunA17_Chr5g0419601 50.725 69 34 0 1 69 8 76 2.70e-16 75.1
Msa0803630 MtrunA17_Chr1g0188671 50.000 68 34 0 2 69 47 114 3.20e-16 75.5
Msa0803630 MtrunA17_Chr2g0317451 50.000 68 34 0 2 69 9 76 3.52e-16 74.7
Msa0803630 MtrunA17_Chr2g0317481 50.000 68 34 0 2 69 9 76 3.90e-16 74.7
Msa0803630 MtrunA17_Chr5g0422421 51.429 70 33 1 2 71 9 77 3.98e-16 74.7
Msa0803630 MtrunA17_Chr4g0052081 33.803 142 80 4 1 132 1 138 5.12e-16 73.2
Msa0803630 MtrunA17_Chr4g0052061 34.559 136 81 4 1 132 1 132 7.70e-16 72.0
Msa0803630 MtrunA17_Chr8g0379021 50.000 68 34 0 2 69 12 79 7.90e-16 72.8
Msa0803630 MtrunA17_Chr5g0422941 50.000 68 34 0 2 69 9 76 1.90e-15 72.8
Msa0803630 MtrunA17_Chr8g0357771 46.154 65 35 0 1 65 1 65 3.90e-15 70.9
Msa0803630 MtrunA17_Chr8g0376821 43.478 69 39 0 1 69 1 69 4.23e-15 70.9
Msa0803630 MtrunA17_Chr2g0300441 46.970 66 35 0 4 69 11 76 5.36e-15 71.6
Msa0803630 MtrunA17_Chr3g0119901 44.928 69 38 0 1 69 8 76 6.36e-15 70.9
Msa0803630 MtrunA17_Chr4g0060841 56.604 53 23 0 1 53 1 53 7.00e-15 72.8
Msa0803630 MtrunA17_Chr4g0018951 55.357 56 25 0 14 69 24 79 9.85e-15 69.3
Msa0803630 MtrunA17_Chr3g0085241 32.749 171 87 5 1 149 40 204 1.07e-14 70.9
Msa0803630 MtrunA17_Chr2g0333981 46.377 69 37 0 1 69 11 79 1.09e-14 69.7
Msa0803630 MtrunA17_Chr5g0417661 52.830 53 25 0 1 53 56 108 1.30e-14 68.2
Msa0803630 MtrunA17_Chr3g0089151 46.269 67 36 0 3 69 10 76 1.39e-14 68.2
Msa0803630 MtrunA17_Chr1g0175611 42.029 69 40 0 1 69 1 69 2.25e-14 68.6
Msa0803630 MtrunA17_Chr1g0169761 48.387 62 32 0 1 62 1 62 2.41e-14 68.6
Msa0803630 MtrunA17_Chr2g0300421 46.154 65 35 0 2 66 9 73 3.69e-14 68.2
Msa0803630 MtrunA17_Chr1g0180591 37.234 94 58 1 1 93 1 94 4.02e-14 68.2
Msa0803630 MtrunA17_Chr8g0356071 41.667 84 48 1 1 83 1 84 6.63e-14 67.0
Msa0803630 MtrunA17_Chr1g0175601 46.774 62 33 0 1 62 1 62 1.19e-13 67.0
Msa0803630 MtrunA17_Chr4g0074101 39.130 69 42 0 1 69 1 69 1.85e-13 66.6
Msa0803630 MtrunA17_Chr3g0111841 50.847 59 29 0 8 66 2 60 1.98e-12 60.8
Msa0803630 MtrunA17_Chr1g0206691 47.458 59 31 0 11 69 1 59 2.50e-12 63.9
Msa0803630 MtrunA17_Chr4g0071601 49.275 69 35 0 1 69 11 79 6.44e-11 59.3
Msa0803630 MtrunA17_Chr8g0345001 31.034 145 84 2 3 131 19 163 8.39e-11 59.3
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0803630 AT2G22540.3 67.500 240 64 3 1 226 1 240 4.63e-108 311
Msa0803630 AT2G22540.1 67.500 240 64 3 1 226 1 240 4.63e-108 311
Msa0803630 AT2G22540.2 66.667 240 61 4 1 226 1 235 3.22e-104 301
Msa0803630 AT4G24540.1 57.709 227 82 6 1 223 1 217 1.31e-76 230
Msa0803630 AT3G61120.1 44.633 177 78 4 1 168 1 166 1.76e-37 131
Msa0803630 AT3G57230.1 42.458 179 102 1 1 179 1 178 6.96e-37 129
Msa0803630 AT3G57230.4 42.458 179 102 1 1 179 1 178 6.96e-37 129
Msa0803630 AT4G09960.1 40.816 196 97 3 1 184 1 189 2.80e-36 127
Msa0803630 AT4G09960.5 40.816 196 97 3 1 184 11 199 3.22e-36 128
Msa0803630 AT4G09960.6 40.816 196 97 3 1 184 2 190 3.24e-36 127
Msa0803630 AT2G42830.2 38.679 212 113 4 1 204 16 218 1.05e-35 127
Msa0803630 AT4G09960.3 40.816 196 97 3 1 184 27 215 1.10e-35 127
Msa0803630 AT3G58780.5 43.017 179 88 3 1 172 22 193 2.17e-35 126
Msa0803630 AT3G58780.1 43.017 179 88 3 1 172 16 187 2.50e-35 125
Msa0803630 AT1G69120.2 41.860 172 99 1 1 171 1 172 4.10e-35 125
Msa0803630 AT4G22950.3 38.605 215 127 3 1 213 1 212 4.29e-35 124
Msa0803630 AT4G22950.1 38.605 215 127 3 1 213 1 212 4.29e-35 124
Msa0803630 AT3G57230.2 46.667 135 71 1 1 135 1 134 5.69e-35 122
Msa0803630 AT4G37940.4 43.293 164 92 1 1 164 1 163 5.77e-35 124
Msa0803630 AT1G26310.1 37.037 216 121 4 1 212 1 205 8.53e-35 124
Msa0803630 AT1G69120.1 41.860 172 99 1 1 171 1 172 8.65e-35 124
Msa0803630 AT2G42830.1 39.151 212 110 5 1 204 16 216 1.25e-34 124
Msa0803630 AT2G22630.1 44.633 177 85 5 1 171 1 170 2.52e-34 122
Msa0803630 AT2G22630.2 44.633 177 85 5 1 171 1 170 2.52e-34 122
Msa0803630 AT2G14210.1 37.500 232 134 5 1 222 1 231 2.81e-34 122
Msa0803630 AT5G62165.3 37.168 226 119 5 1 223 1 206 3.08e-34 122
Msa0803630 AT5G62165.1 37.168 226 119 5 1 223 1 206 3.08e-34 122
Msa0803630 AT5G62165.2 37.168 226 119 5 1 223 1 206 3.08e-34 122
Msa0803630 AT4G37940.1 42.073 164 94 1 1 164 1 163 3.23e-34 122
Msa0803630 AT2G14210.2 38.967 213 125 4 1 209 1 212 3.89e-34 122
Msa0803630 AT2G45650.1 44.253 174 84 4 1 168 1 167 3.93e-34 123
Msa0803630 AT4G18960.1 38.916 203 109 4 2 194 18 215 7.78e-34 122
Msa0803630 AT4G22950.2 42.690 171 97 1 1 171 1 170 1.34e-33 119
Msa0803630 AT5G60910.1 44.444 171 88 4 1 167 1 168 2.11e-33 120
Msa0803630 AT4G37940.3 45.926 135 72 1 1 135 1 134 2.56e-33 118
Msa0803630 AT3G30260.1 43.333 150 83 2 1 149 1 149 7.31e-33 119
Msa0803630 AT4G09960.4 42.945 163 79 2 1 156 96 251 8.08e-33 121
Msa0803630 AT4G09960.2 40.838 191 90 5 1 184 1 175 1.01e-32 118
Msa0803630 AT2G45660.1 42.529 174 86 3 1 167 1 167 1.16e-32 118
Msa0803630 AT5G51870.1 42.442 172 98 1 1 171 1 172 3.31e-32 116
Msa0803630 AT5G51870.4 42.857 168 95 1 1 167 1 168 5.75e-32 116
Msa0803630 AT5G51870.3 42.857 168 95 1 1 167 11 178 6.98e-32 116
Msa0803630 AT5G13790.1 35.593 236 119 5 1 223 1 216 7.81e-32 117
Msa0803630 AT5G23260.2 43.333 180 93 4 1 174 1 177 7.97e-32 117
Msa0803630 AT5G51870.2 43.827 162 82 3 1 153 1 162 1.31e-31 114
Msa0803630 AT5G23260.4 43.333 180 93 4 1 174 17 193 1.62e-31 116
Msa0803630 AT3G57390.1 34.454 238 138 4 1 226 1 232 1.72e-31 116
Msa0803630 AT3G58780.2 40.698 172 95 2 1 172 16 180 3.10e-31 115
Msa0803630 AT5G62165.10 36.726 226 106 6 1 223 1 192 3.62e-31 113
Msa0803630 AT5G62165.4 36.726 226 106 6 1 223 1 192 3.62e-31 113
Msa0803630 AT1G24260.2 40.909 176 100 2 1 172 1 176 4.35e-31 115
Msa0803630 AT5G51870.5 43.827 162 82 3 1 153 24 185 4.46e-31 113
Msa0803630 AT3G58780.4 43.949 157 74 3 1 150 16 165 4.80e-31 115
Msa0803630 AT1G24260.1 41.143 175 100 2 1 172 1 175 1.09e-30 114
Msa0803630 AT5G13790.2 34.728 239 120 5 1 223 1 219 1.34e-30 114
Msa0803630 AT2G45660.2 42.945 163 79 3 1 156 1 156 1.70e-30 110
Msa0803630 AT3G57390.3 34.335 233 135 4 1 221 1 227 2.14e-30 112
Msa0803630 AT5G15800.1 42.308 182 98 4 1 178 1 179 2.97e-30 112
Msa0803630 AT5G15800.2 41.848 184 96 4 1 178 1 179 4.35e-30 112
Msa0803630 AT2G03710.3 37.931 174 105 2 1 172 1 173 7.39e-30 110
Msa0803630 AT3G58780.3 37.745 204 88 4 1 172 16 212 7.72e-30 112
Msa0803630 AT5G62165.17 40.764 157 91 2 1 156 1 156 2.45e-29 107
Msa0803630 AT5G62165.12 40.764 157 91 2 1 156 1 156 2.45e-29 107
Msa0803630 AT5G62165.11 40.764 157 91 2 1 156 1 156 2.45e-29 107
Msa0803630 AT5G62165.6 43.357 143 79 2 1 142 1 142 5.29e-29 107
Msa0803630 AT5G62165.9 43.357 143 79 2 1 142 1 142 5.29e-29 107
Msa0803630 AT5G62165.7 43.357 143 79 2 1 142 1 142 5.29e-29 107
Msa0803630 AT5G62165.8 43.357 143 79 2 1 142 1 142 5.29e-29 107
Msa0803630 AT5G62165.13 43.357 143 79 2 1 142 1 142 5.29e-29 107
Msa0803630 AT3G02310.1 35.714 238 126 8 1 225 1 224 5.88e-29 109
Msa0803630 AT5G23260.1 42.778 180 89 5 1 174 17 188 6.37e-29 109
Msa0803630 AT2G03710.1 37.427 171 104 2 1 169 1 170 7.77e-29 109
Msa0803630 AT2G03710.2 37.427 171 104 2 1 169 1 170 8.37e-29 109
Msa0803630 AT5G20240.1 41.520 171 82 5 1 166 1 158 2.77e-28 106
Msa0803630 AT1G24260.3 41.250 160 90 2 1 156 1 160 2.80e-28 107
Msa0803630 AT4G11880.4 43.429 175 83 4 1 167 1 167 3.98e-28 106
Msa0803630 AT4G11880.1 43.429 175 83 4 1 167 1 167 3.98e-28 106
Msa0803630 AT4G11880.2 42.675 157 88 2 1 156 1 156 4.40e-28 105
Msa0803630 AT4G11880.3 42.675 157 88 2 1 156 1 156 4.40e-28 105
Msa0803630 AT5G20240.2 42.553 141 72 3 1 138 1 135 5.85e-28 103
Msa0803630 AT5G51860.2 37.949 195 108 3 1 188 1 189 9.94e-28 105
Msa0803630 AT5G51860.1 39.655 174 92 3 1 167 1 168 1.17e-27 105
Msa0803630 AT3G02310.2 41.765 170 88 4 1 164 1 165 1.65e-27 104
Msa0803630 AT5G23260.3 43.312 157 84 3 1 155 1 154 7.43e-27 103
Msa0803630 AT5G62165.14 60.000 75 30 0 1 75 1 75 2.27e-25 95.9
Msa0803630 AT3G54340.1 38.125 160 92 3 1 158 1 155 3.07e-24 96.7
Msa0803630 AT5G10140.4 36.364 187 98 6 1 179 1 174 1.66e-23 93.6
Msa0803630 AT5G10140.2 39.474 152 80 5 1 150 1 142 6.14e-23 91.7
Msa0803630 AT5G10140.3 39.474 152 80 5 1 150 1 142 7.00e-23 92.0
Msa0803630 AT5G10140.1 39.474 152 80 5 1 150 1 142 8.46e-23 92.0
Msa0803630 AT5G65070.1 36.264 182 93 5 1 174 1 167 1.58e-21 88.6
Msa0803630 AT5G65050.2 35.429 175 100 5 1 172 1 165 1.59e-21 88.2
Msa0803630 AT5G65060.3 33.714 175 103 4 1 172 1 165 1.60e-21 88.6
Msa0803630 AT5G65060.1 33.721 172 105 3 1 171 1 164 1.64e-21 88.6
Msa0803630 AT5G65050.3 35.260 173 103 4 1 172 1 165 3.43e-21 87.8
Msa0803630 AT5G65050.5 35.057 174 91 5 1 172 1 154 1.06e-20 86.3
Msa0803630 AT1G71692.1 66.102 59 20 0 1 59 1 59 1.86e-20 86.3
Msa0803630 AT5G65070.4 46.078 102 47 3 1 94 1 102 4.65e-20 83.6
Msa0803630 AT5G65060.2 33.721 172 94 3 1 171 1 153 9.52e-20 83.6
Msa0803630 AT5G65050.1 35.294 170 98 5 1 166 1 162 1.82e-19 82.8
Msa0803630 AT5G65070.5 54.167 72 32 1 1 71 1 72 4.74e-19 82.4
Msa0803630 AT5G65070.2 54.167 72 32 1 1 71 1 72 4.74e-19 82.8
Msa0803630 AT1G22130.1 65.517 58 20 0 1 58 1 58 2.96e-18 82.4
Msa0803630 AT1G77980.1 54.286 70 31 1 1 69 1 70 4.65e-18 81.6
Msa0803630 AT4G36590.1 47.191 89 47 0 2 90 7 95 4.70e-18 80.5
Msa0803630 AT5G65070.3 57.627 59 25 0 1 59 1 59 5.17e-18 80.1
Msa0803630 AT5G65080.3 37.107 159 87 5 1 156 8 156 2.37e-17 77.4
Msa0803630 AT5G65080.2 57.627 59 25 0 1 59 8 66 1.14e-16 75.9
Msa0803630 AT2G24840.1 34.641 153 76 5 1 132 62 211 2.35e-16 76.3
Msa0803630 AT1G77080.11 36.207 174 100 4 1 172 1 165 3.61e-16 73.9
Msa0803630 AT1G77950.3 31.148 183 85 5 1 142 1 183 7.85e-16 74.3
Msa0803630 AT1G77950.2 31.148 183 85 5 1 142 1 183 7.85e-16 74.3
Msa0803630 AT1G77950.1 31.148 183 85 5 1 142 1 183 7.85e-16 74.3
Msa0803630 AT1G77950.4 31.148 183 85 5 1 142 1 183 7.85e-16 74.3
Msa0803630 AT1G77080.4 35.632 174 101 4 1 172 1 165 9.03e-16 73.2
Msa0803630 AT2G34440.1 45.588 68 37 0 1 68 1 68 1.05e-15 72.4
Msa0803630 AT1G69540.1 31.980 197 81 8 1 161 1 180 1.57e-15 74.7
Msa0803630 AT1G77080.5 35.632 174 101 4 1 172 1 165 1.62e-15 72.0
Msa0803630 AT1G69540.2 31.980 197 81 8 1 161 1 180 2.04e-15 74.7
Msa0803630 AT1G77080.2 37.572 173 95 4 1 172 1 161 2.39e-15 72.0
Msa0803630 AT2G03060.3 58.491 53 22 0 1 53 1 53 2.88e-15 74.3
Msa0803630 AT2G03060.7 58.491 53 22 0 1 53 1 53 2.88e-15 74.3
Msa0803630 AT2G03060.1 58.491 53 22 0 1 53 1 53 2.88e-15 74.3
Msa0803630 AT1G01530.1 46.269 67 36 0 1 67 6 72 2.93e-15 72.8
Msa0803630 AT2G03060.2 58.491 53 22 0 1 53 1 53 3.46e-15 73.9
Msa0803630 AT3G66656.1 34.426 122 72 2 1 116 1 120 1.36e-14 69.7
Msa0803630 AT5G60440.1 46.269 67 36 0 2 68 7 73 2.45e-14 70.9
Msa0803630 AT1G18750.4 52.830 53 25 0 1 53 1 53 3.06e-14 71.2
Msa0803630 AT1G72350.1 53.333 60 28 0 2 61 43 102 3.08e-14 69.7
Msa0803630 AT4G37435.1 56.140 57 25 0 1 57 1 57 3.18e-14 68.9
Msa0803630 AT1G18750.1 52.830 53 25 0 1 53 1 53 3.44e-14 71.2
Msa0803630 AT1G18750.3 52.830 53 25 0 1 53 1 53 3.64e-14 71.2
Msa0803630 AT1G65360.1 44.776 67 37 0 1 67 6 72 4.38e-14 69.3
Msa0803630 AT1G31140.1 53.226 62 29 0 1 62 1 62 1.01e-13 68.2
Msa0803630 AT1G31140.2 53.226 62 29 0 1 62 1 62 1.05e-13 68.2
Msa0803630 AT1G77080.12 38.217 157 84 4 1 156 1 145 1.21e-13 66.6
Msa0803630 AT2G26320.1 45.333 75 39 1 1 73 17 91 1.52e-13 65.1
Msa0803630 AT1G77080.8 35.326 184 99 6 1 164 1 184 1.69e-13 67.8
Msa0803630 AT3G04100.1 40.299 67 40 0 2 68 14 80 3.73e-13 66.2
Msa0803630 AT1G28460.1 31.285 179 102 6 3 175 9 172 8.77e-13 65.1
Msa0803630 AT1G47760.1 41.176 68 40 0 1 68 1 68 1.60e-12 64.3
Msa0803630 AT3G05860.2 27.907 215 123 8 1 208 1 190 7.11e-12 62.8
Msa0803630 AT3G05860.1 27.778 216 122 9 1 208 1 190 1.28e-11 62.8
Msa0803630 AT3G05860.3 29.801 151 78 6 1 146 1 128 2.94e-11 61.6
Msa0803630 AT1G29962.1 43.939 66 37 0 3 68 9 74 3.77e-11 60.5

Find 96 sgRNAs with CRISPR-Local

Find 428 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TTCATTATTGTTCCTCAAAA+AGG 0.189187 5_3:-18890163 Msa0803630:five_prime_UTR
TCAATGAATGAATATGATTT+TGG 0.193776 5_3:+18890382 None:intergenic
TTGGAGAGGTCACTTGAAAT+TGG 0.219701 5_3:-18888006 Msa0803630:CDS
GATGTGTAGTTAACTATTTA+TGG 0.226009 5_3:+18889894 None:intergenic
GAATATTTCTAACCTTTCTT+TGG 0.260465 5_3:+18887834 None:intergenic
CCCTCATCTGCCTTAATTGA+TGG 0.266278 5_3:+18888070 None:intergenic
ATCCAAAAGAGGATAAATTA+AGG 0.281250 5_3:-18889714 Msa0803630:intron
AAAGAGAGTCAGAAAGAAAA+AGG 0.293042 5_3:+18890254 None:intergenic
ATTGCTTTGCCTTACCATAA+AGG 0.320424 5_3:-18890312 Msa0803630:five_prime_UTR
ACATTCCTTCAGCCGGCATA+TGG 0.334671 5_3:+18886507 None:intergenic
GGGATTAAACTGGGTGTGTT+TGG 0.336377 5_3:-18886474 Msa0803630:three_prime_UTR
TTGCTTTGCCTTACCATAAA+GGG 0.340354 5_3:-18890311 Msa0803630:five_prime_UTR
TATCTGAACTCTCATAATCT+TGG 0.352501 5_3:+18886714 None:intergenic
CTAAGAAGAGCCATCAATTA+AGG 0.355623 5_3:-18888080 Msa0803630:CDS
CACCAGTTTCTTCTCTATAG+AGG 0.366305 5_3:-18890046 Msa0803630:five_prime_UTR
TGTGGAAGAATTACAACAAT+TGG 0.373590 5_3:-18888025 Msa0803630:CDS
ACTGGGTGTGTTTGGATTGA+GGG 0.378593 5_3:-18886466 Msa0803630:three_prime_UTR
CTCAAAGAACCTCGCAAAGC+TGG 0.379678 5_3:-18888340 Msa0803630:CDS
ATCTGAACTCTCATAATCTT+GGG 0.383551 5_3:+18886715 None:intergenic
AGAAGAAACTGGTGAACAAA+TGG 0.387332 5_3:+18890055 None:intergenic
AAGAAGAGGATTAATCAAAA+AGG 0.392982 5_3:-18889609 Msa0803630:CDS
TCTTTGAATACTCCAACTTA+AGG 0.399297 5_3:-18889520 Msa0803630:intron
AGAACCGTCTCTTGAGTTGC+AGG 0.416179 5_3:-18888316 Msa0803630:intron
TGGAGAGGTCACTTGAAATT+GGG 0.419481 5_3:-18888005 Msa0803630:CDS
TGTGTTTGGATTGAGGGTTT+AGG 0.420522 5_3:-18886460 Msa0803630:three_prime_UTR
GACAAAAGAAAGAGAAGTGA+AGG 0.420606 5_3:+18889868 None:intergenic
TCAGATACATCGCTCAAGTT+GGG 0.436087 5_3:-18886698 Msa0803630:CDS
ATGATGGATCATAAGGTTGC+GGG 0.443250 5_3:-18886842 Msa0803630:intron
ACTCATACCCTAGTGACCTT+TGG 0.446181 5_3:-18890351 Msa0803630:five_prime_UTR
GATGCAGTCATGCAGGCATT+TGG 0.450177 5_3:+18889949 None:intergenic
GTCTCTGAAAGATAATGAAA+TGG 0.452122 5_3:+18890000 None:intergenic
AACTGGGTGTGTTTGGATTG+AGG 0.460175 5_3:-18886467 Msa0803630:three_prime_UTR
CTCGTCTTCCAAAGGTCACT+AGG 0.464850 5_3:+18890343 None:intergenic
GAGAAAGAAAGACCTTAAGT+TGG 0.470112 5_3:+18889508 None:intergenic
AGGTCACTTGAAATTGGGTT+GGG 0.472406 5_3:-18888000 Msa0803630:CDS
TTCAGATACATCGCTCAAGT+TGG 0.479254 5_3:-18886699 Msa0803630:CDS
CATTCCTTCAGCCGGCATAT+GGG 0.480333 5_3:+18886508 None:intergenic
AATTAAGGTAAAGAAAGATA+TGG 0.481532 5_3:-18889699 Msa0803630:exon
TTGTGTGCGAGGGATTAAAC+TGG 0.485950 5_3:-18886484 Msa0803630:three_prime_UTR
GAGGTCACTTGAAATTGGGT+TGG 0.488246 5_3:-18888001 Msa0803630:CDS
GATCAATGATCTCCAAAGAA+AGG 0.499633 5_3:-18887846 Msa0803630:intron
ATCCTCTATAGAGAAGAAAC+TGG 0.502434 5_3:+18890044 None:intergenic
AGATCTTGAAGGTTTGAATG+TGG 0.507969 5_3:-18888043 Msa0803630:CDS
AAGTAAACCCCTTTATGGTA+AGG 0.510438 5_3:+18890303 None:intergenic
CTCTATAGAGGATCTAAAAG+AGG 0.520099 5_3:-18890034 Msa0803630:five_prime_UTR
TGGATGAATTATGGGTTAGG+AGG 0.527557 5_3:+18890098 None:intergenic
ATCATACATGTTGCTTTAGT+CGG 0.530014 5_3:+18887030 None:intergenic
ATAATCTTGGGGAGGACCAA+TGG 0.530085 5_3:+18886727 None:intergenic
ATGAGGGGAGAAGATCTTGA+AGG 0.541103 5_3:-18888054 Msa0803630:CDS
GAAGAAACTGGTGAACAAAT+GGG 0.545104 5_3:+18890056 None:intergenic
ATTTCATCATCATAGAAAGA+AGG 0.553332 5_3:-18889926 Msa0803630:five_prime_UTR
CCATCAATTAAGGCAGATGA+GGG 0.555256 5_3:-18888070 Msa0803630:CDS
TGATGTTTATTTGGTTAGTG+AGG 0.555731 5_3:+18890199 None:intergenic
CACACAAACATTCCTTCAGC+CGG 0.558090 5_3:+18886500 None:intergenic
TATGAGAATGTGGTTAATGA+AGG 0.563013 5_3:-18886785 Msa0803630:CDS
ATGAAATGATGCAGTCATGC+AGG 0.563073 5_3:+18889942 None:intergenic
TTTGGATTGAGGGTTTAGGA+AGG 0.563543 5_3:-18886456 Msa0803630:three_prime_UTR
TCAGGGAGAGAAGATCATGA+TGG 0.564270 5_3:-18887870 Msa0803630:intron
ATTTGCAGGCTCCCATATGC+CGG 0.566203 5_3:-18886519 Msa0803630:intron
GGCTCCCATATGCCGGCTGA+AGG 0.566587 5_3:-18886512 Msa0803630:exon
TTGGATTGAGGGTTTAGGAA+GGG 0.570252 5_3:-18886455 Msa0803630:three_prime_UTR
GATTGAGGGTTTAGGAAGGG+AGG 0.571429 5_3:-18886452 Msa0803630:three_prime_UTR
ATGATTAACGACAGAATGGT+TGG 0.571480 5_3:-18886818 Msa0803630:CDS
GCCATCAATTAAGGCAGATG+AGG 0.573391 5_3:-18888071 Msa0803630:CDS
ATACTGCAGCTAGTTGAAAA+CGG 0.573526 5_3:-18888132 Msa0803630:intron
GTAGTGTGAAATGTACTTTG+TGG 0.574489 5_3:+18890130 None:intergenic
ACCAACGTTTACAACTCCAT+TGG 0.576740 5_3:-18886743 Msa0803630:CDS
GGGCATGATTAACGACAGAA+TGG 0.581587 5_3:-18886822 Msa0803630:CDS
CCTGCAGGGAAGGCAACTGA+TGG 0.581631 5_3:-18887063 Msa0803630:intron
ATAGAGGATCTAAAAGAGGA+AGG 0.586408 5_3:-18890030 Msa0803630:five_prime_UTR
TTGAGGAACAATAATGAACA+TGG 0.587700 5_3:+18890168 None:intergenic
AACGTTGGTGACAGATTCTG+AGG 0.592708 5_3:+18886757 None:intergenic
TGCTTTGCCTTACCATAAAG+GGG 0.597645 5_3:-18890310 Msa0803630:five_prime_UTR
GTGGCTCGCTCGTCTTCCAA+AGG 0.597700 5_3:+18890335 None:intergenic
TGAAGGAATGTTTGTGTGCG+AGG 0.598854 5_3:-18886495 Msa0803630:three_prime_UTR
CAGATACATCGCTCAAGTTG+GGG 0.603531 5_3:-18886697 Msa0803630:intron
ACGGTTCTTCCAGCTTTGCG+AGG 0.603660 5_3:+18888331 None:intergenic
TCGTCTTCCAAAGGTCACTA+GGG 0.607418 5_3:+18890344 None:intergenic
GCGTGAGGGAAATACTTGAA+AGG 0.613182 5_3:-18888374 Msa0803630:CDS
TGTGTTATGATGAAGCGTGA+GGG 0.617556 5_3:-18888388 Msa0803630:intron
TCTGAACTCTCATAATCTTG+GGG 0.621502 5_3:+18886716 None:intergenic
GGGCCGTGTAATAGAAAACA+AGG 0.627922 5_3:-18887980 Msa0803630:intron
AAGAATTACAACAATTGGAG+AGG 0.631162 5_3:-18888020 Msa0803630:CDS
GAAGGAATGTTTGTGTGCGA+GGG 0.633057 5_3:-18886494 Msa0803630:three_prime_UTR
ATTAACGACAGAATGGTTGG+AGG 0.640229 5_3:-18886815 Msa0803630:CDS
CAACTGTTCTAGATTGAGCA+AGG 0.640451 5_3:-18888109 Msa0803630:CDS
CCAACCTGCAACTCAAGAGA+CGG 0.649927 5_3:+18888312 None:intergenic
ACCAATGGAGTTGTAAACGT+TGG 0.652128 5_3:+18886742 None:intergenic
AGGTGATGAATATGAGAATG+TGG 0.655081 5_3:-18886795 Msa0803630:CDS
GAACTCTCATAATCTTGGGG+AGG 0.658116 5_3:+18886719 None:intergenic
AGATTGAAAACGCAACGGCG+AGG 0.667280 5_3:-18889652 Msa0803630:CDS
TGTGTGCGAGGGATTAAACT+GGG 0.674374 5_3:-18886483 Msa0803630:three_prime_UTR
AAAGAAGATTGAAAACGCAA+CGG 0.680027 5_3:-18889657 Msa0803630:CDS
GAAACTGGTGAACAAATGGG+TGG 0.701064 5_3:+18890059 None:intergenic
TATGGTAAGGCAAAGCAATG+TGG 0.708560 5_3:+18890316 None:intergenic
CATCAATTAAGGCAGATGAG+GGG 0.712596 5_3:-18888069 Msa0803630:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! AAGAAAAAAAAAATAGATTT+TGG - chr5_3:18888025-18888044 Msa0803630:CDS 10.0%
!! TGTATTTGTAAAAAAAAAAT+TGG - chr5_3:18889171-18889190 Msa0803630:intron 10.0%
!!! AAGAAAAAAAAAATAGATTT+TGG - chr5_3:18888025-18888044 Msa0803630:CDS 10.0%
!! TGTATTTGTAAAAAAAAAAT+TGG - chr5_3:18889171-18889190 Msa0803630:intron 10.0%
!!! TTTATTTTTGGATGAATTAT+GGG + chr5_3:18886591-18886610 None:intergenic 15.0%
!!! ATTTATTTTTGGATGAATTA+TGG + chr5_3:18886592-18886611 None:intergenic 15.0%
!! ATATATGTAGCAAAAAATAA+AGG - chr5_3:18886911-18886930 Msa0803630:intron 15.0%
!! ATTATCCTAATTAATAATGT+TGG + chr5_3:18887510-18887529 None:intergenic 15.0%
!! ACATTATTAATTAGGATAAT+TGG - chr5_3:18887510-18887529 Msa0803630:intron 15.0%
!!! AGGAATATATTTTTATTTTG+AGG - chr5_3:18888058-18888077 Msa0803630:CDS 15.0%
!!! ATCATTCATTGTTATTTATT+TGG - chr5_3:18888247-18888266 Msa0803630:intron 15.0%
!!! AATGTTTTATTTGTTCATTT+TGG + chr5_3:18888454-18888473 None:intergenic 15.0%
!!! AAAAAAAAAAAAGTACTAGT+AGG + chr5_3:18888736-18888755 None:intergenic 15.0%
!!! AAAATATTGTTTTGTTTTTC+AGG - chr5_3:18888790-18888809 Msa0803630:intron 15.0%
!!! AAATATTGTTTTGTTTTTCA+GGG - chr5_3:18888791-18888810 Msa0803630:intron 15.0%
!!! TTTTTTTTTAACAATCAAAG+TGG + chr5_3:18889015-18889034 None:intergenic 15.0%
!!! TACTTTTACTAAAAATTGTA+AGG - chr5_3:18889047-18889066 Msa0803630:intron 15.0%
!!! ACTTTTACTAAAAATTGTAA+GGG - chr5_3:18889048-18889067 Msa0803630:intron 15.0%
!! AAAAATATCATGCAAATATT+GGG + chr5_3:18889768-18889787 None:intergenic 15.0%
!! TAAAAATATCATGCAAATAT+TGG + chr5_3:18889769-18889788 None:intergenic 15.0%
!! AAAAAATTACTTGTATATGA+TGG - chr5_3:18889820-18889839 Msa0803630:intron 15.0%
!!! TTTATTTTTGGATGAATTAT+GGG + chr5_3:18886591-18886610 None:intergenic 15.0%
!!! ATTTATTTTTGGATGAATTA+TGG + chr5_3:18886592-18886611 None:intergenic 15.0%
!! ATATATGTAGCAAAAAATAA+AGG - chr5_3:18886911-18886930 Msa0803630:intron 15.0%
!! ATTATCCTAATTAATAATGT+TGG + chr5_3:18887510-18887529 None:intergenic 15.0%
!! ACATTATTAATTAGGATAAT+TGG - chr5_3:18887510-18887529 Msa0803630:intron 15.0%
!!! AGGAATATATTTTTATTTTG+AGG - chr5_3:18888058-18888077 Msa0803630:CDS 15.0%
!!! ATCATTCATTGTTATTTATT+TGG - chr5_3:18888247-18888266 Msa0803630:intron 15.0%
!!! AATGTTTTATTTGTTCATTT+TGG + chr5_3:18888454-18888473 None:intergenic 15.0%
!!! AAAAAAAAAAAAGTACTAGT+AGG + chr5_3:18888736-18888755 None:intergenic 15.0%
!!! AAAATATTGTTTTGTTTTTC+AGG - chr5_3:18888790-18888809 Msa0803630:intron 15.0%
!!! AAATATTGTTTTGTTTTTCA+GGG - chr5_3:18888791-18888810 Msa0803630:intron 15.0%
!!! TTTTTTTTTAACAATCAAAG+TGG + chr5_3:18889015-18889034 None:intergenic 15.0%
!!! TACTTTTACTAAAAATTGTA+AGG - chr5_3:18889047-18889066 Msa0803630:intron 15.0%
!!! ACTTTTACTAAAAATTGTAA+GGG - chr5_3:18889048-18889067 Msa0803630:intron 15.0%
!! AAAAATATCATGCAAATATT+GGG + chr5_3:18889768-18889787 None:intergenic 15.0%
!! TAAAAATATCATGCAAATAT+TGG + chr5_3:18889769-18889788 None:intergenic 15.0%
!! AAAAAATTACTTGTATATGA+TGG - chr5_3:18889820-18889839 Msa0803630:intron 15.0%
!!! GTGGTTTCTATATTTATTTT+TGG + chr5_3:18886603-18886622 None:intergenic 20.0%
!!! ATTATTGTTTTATCCAAAAG+AGG - chr5_3:18886953-18886972 Msa0803630:intron 20.0%
!! AATTAAGGTAAAGAAAGATA+TGG - chr5_3:18886979-18886998 Msa0803630:intron 20.0%
!! ACTCTAATGAATTAAAACAA+TGG - chr5_3:18887218-18887237 Msa0803630:intron 20.0%
!!! GTAGATCTTTTTTCAAAAAA+TGG - chr5_3:18887310-18887329 Msa0803630:intron 20.0%
!! TTATGAGTTAGATCAAAATA+TGG + chr5_3:18887681-18887700 None:intergenic 20.0%
!! TTTATATAGCTAATGTTACA+CGG - chr5_3:18887895-18887914 Msa0803630:intron 20.0%
!! TAAATTAATTGTTGTCATGT+TGG - chr5_3:18887926-18887945 Msa0803630:intron 20.0%
!! AAATTAATTGTTGTCATGTT+GGG - chr5_3:18887927-18887946 Msa0803630:intron 20.0%
!!! TGATCTTTTTTTTAACAAGA+TGG - chr5_3:18888088-18888107 Msa0803630:CDS 20.0%
!! TTATTTGGTATAATTTGACT+TGG - chr5_3:18888262-18888281 Msa0803630:intron 20.0%
!! ACTCAACATGTTATATTAAT+TGG - chr5_3:18888873-18888892 Msa0803630:intron 20.0%
!! ACACAATTTAATGTATGAAT+TGG + chr5_3:18889111-18889130 None:intergenic 20.0%
!!! AATTATGCTTAGTTTTGTAT+TGG - chr5_3:18889490-18889509 Msa0803630:intron 20.0%
!! TAAGTGAACTAATAATAATG+TGG + chr5_3:18890024-18890043 None:intergenic 20.0%
!!! AATGTAGAATTTCTTTTTGA+AGG - chr5_3:18890061-18890080 Msa0803630:five_prime_UTR 20.0%
!!! GTGGTTTCTATATTTATTTT+TGG + chr5_3:18886603-18886622 None:intergenic 20.0%
!!! ATTATTGTTTTATCCAAAAG+AGG - chr5_3:18886953-18886972 Msa0803630:intron 20.0%
!! AATTAAGGTAAAGAAAGATA+TGG - chr5_3:18886979-18886998 Msa0803630:intron 20.0%
!! ACTCTAATGAATTAAAACAA+TGG - chr5_3:18887218-18887237 Msa0803630:intron 20.0%
!!! GTAGATCTTTTTTCAAAAAA+TGG - chr5_3:18887310-18887329 Msa0803630:intron 20.0%
!! TTATGAGTTAGATCAAAATA+TGG + chr5_3:18887681-18887700 None:intergenic 20.0%
!! TTTATATAGCTAATGTTACA+CGG - chr5_3:18887895-18887914 Msa0803630:intron 20.0%
!! TAAATTAATTGTTGTCATGT+TGG - chr5_3:18887926-18887945 Msa0803630:intron 20.0%
!! AAATTAATTGTTGTCATGTT+GGG - chr5_3:18887927-18887946 Msa0803630:intron 20.0%
!!! TGATCTTTTTTTTAACAAGA+TGG - chr5_3:18888088-18888107 Msa0803630:CDS 20.0%
!! TTATTTGGTATAATTTGACT+TGG - chr5_3:18888262-18888281 Msa0803630:intron 20.0%
!! ACTCAACATGTTATATTAAT+TGG - chr5_3:18888873-18888892 Msa0803630:intron 20.0%
!! ACACAATTTAATGTATGAAT+TGG + chr5_3:18889111-18889130 None:intergenic 20.0%
!!! AATTATGCTTAGTTTTGTAT+TGG - chr5_3:18889490-18889509 Msa0803630:intron 20.0%
!! TAAGTGAACTAATAATAATG+TGG + chr5_3:18890024-18890043 None:intergenic 20.0%
!!! AATGTAGAATTTCTTTTTGA+AGG - chr5_3:18890061-18890080 Msa0803630:five_prime_UTR 20.0%
!!! GATTTTTGGTGATGTTTATT+TGG + chr5_3:18886491-18886510 None:intergenic 25.0%
!! CAATAATGAACATGGATTTT+TGG + chr5_3:18886505-18886524 None:intergenic 25.0%
! TTCATTATTGTTCCTCAAAA+AGG - chr5_3:18886515-18886534 Msa0803630:intron 25.0%
! ATTTCATCATCATAGAAAGA+AGG - chr5_3:18886752-18886771 Msa0803630:CDS 25.0%
! GATGTGTAGTTAACTATTTA+TGG + chr5_3:18886787-18886806 None:intergenic 25.0%
!! TCTTTTGTCTCTTCTTTTTT+AGG - chr5_3:18886824-18886843 Msa0803630:CDS 25.0%
! ATCCAAAAGAGGATAAATTA+AGG - chr5_3:18886964-18886983 Msa0803630:intron 25.0%
!! TACCTTAATTTATCCTCTTT+TGG + chr5_3:18886969-18886988 None:intergenic 25.0%
! AAGAAGAGGATTAATCAAAA+AGG - chr5_3:18887069-18887088 Msa0803630:intron 25.0%
! TTAAAAGTGAAAACAAACAC+AGG - chr5_3:18887370-18887389 Msa0803630:intron 25.0%
! TTCAGCCAACATTATTAATT+AGG - chr5_3:18887502-18887521 Msa0803630:intron 25.0%
! TTTATCCTAACAAGTGAAAT+CGG - chr5_3:18887616-18887635 Msa0803630:intron 25.0%
! AATTAATTGTTGTCATGTTG+GGG - chr5_3:18887928-18887947 Msa0803630:intron 25.0%
!! TCTTCTAAAAACAAAGAACA+CGG + chr5_3:18888009-18888028 None:intergenic 25.0%
!!! TAGATTTTGGAAAAGCTATT+AGG - chr5_3:18888038-18888057 Msa0803630:CDS 25.0%
! TCAAAAAAGTTCCAATCAAA+CGG - chr5_3:18888196-18888215 Msa0803630:intron 25.0%
!! GAATATTTCTAACCTTTCTT+TGG + chr5_3:18888847-18888866 None:intergenic 25.0%
! ATTTAATTAGATAGAGTCGA+TGG - chr5_3:18888905-18888924 Msa0803630:intron 25.0%
!!! AGATTTGTGAACAACTTTTT+TGG + chr5_3:18889273-18889292 None:intergenic 25.0%
! TTCACAAATCTTAATTCAAC+TGG - chr5_3:18889282-18889301 Msa0803630:intron 25.0%
!! GACGTCAATATTAACAATTT+TGG + chr5_3:18889313-18889332 None:intergenic 25.0%
! GAAGCTAATTTAGATATATG+TGG + chr5_3:18889570-18889589 None:intergenic 25.0%
!!! GATTTTTGGTGATGTTTATT+TGG + chr5_3:18886491-18886510 None:intergenic 25.0%
!! CAATAATGAACATGGATTTT+TGG + chr5_3:18886505-18886524 None:intergenic 25.0%
! TTCATTATTGTTCCTCAAAA+AGG - chr5_3:18886515-18886534 Msa0803630:intron 25.0%
! ATTTCATCATCATAGAAAGA+AGG - chr5_3:18886752-18886771 Msa0803630:CDS 25.0%
! GATGTGTAGTTAACTATTTA+TGG + chr5_3:18886787-18886806 None:intergenic 25.0%
!! TCTTTTGTCTCTTCTTTTTT+AGG - chr5_3:18886824-18886843 Msa0803630:CDS 25.0%
! ATCCAAAAGAGGATAAATTA+AGG - chr5_3:18886964-18886983 Msa0803630:intron 25.0%
!! TACCTTAATTTATCCTCTTT+TGG + chr5_3:18886969-18886988 None:intergenic 25.0%
! AAGAAGAGGATTAATCAAAA+AGG - chr5_3:18887069-18887088 Msa0803630:intron 25.0%
! TTAAAAGTGAAAACAAACAC+AGG - chr5_3:18887370-18887389 Msa0803630:intron 25.0%
! TTCAGCCAACATTATTAATT+AGG - chr5_3:18887502-18887521 Msa0803630:intron 25.0%
! TTTATCCTAACAAGTGAAAT+CGG - chr5_3:18887616-18887635 Msa0803630:intron 25.0%
! AATTAATTGTTGTCATGTTG+GGG - chr5_3:18887928-18887947 Msa0803630:intron 25.0%
!! TCTTCTAAAAACAAAGAACA+CGG + chr5_3:18888009-18888028 None:intergenic 25.0%
!!! TAGATTTTGGAAAAGCTATT+AGG - chr5_3:18888038-18888057 Msa0803630:CDS 25.0%
! TCAAAAAAGTTCCAATCAAA+CGG - chr5_3:18888196-18888215 Msa0803630:intron 25.0%
!! GAATATTTCTAACCTTTCTT+TGG + chr5_3:18888847-18888866 None:intergenic 25.0%
! ATTTAATTAGATAGAGTCGA+TGG - chr5_3:18888905-18888924 Msa0803630:intron 25.0%
!!! AGATTTGTGAACAACTTTTT+TGG + chr5_3:18889273-18889292 None:intergenic 25.0%
! TTCACAAATCTTAATTCAAC+TGG - chr5_3:18889282-18889301 Msa0803630:intron 25.0%
!! GACGTCAATATTAACAATTT+TGG + chr5_3:18889313-18889332 None:intergenic 25.0%
! GAAGCTAATTTAGATATATG+TGG + chr5_3:18889570-18889589 None:intergenic 25.0%
GTAAAAAGTAAACCCCTTTA+TGG + chr5_3:18886383-18886402 None:intergenic 30.0%
AAAGAGAGTCAGAAAGAAAA+AGG + chr5_3:18886427-18886446 None:intergenic 30.0%
TGATGTTTATTTGGTTAGTG+AGG + chr5_3:18886482-18886501 None:intergenic 30.0%
TTGAGGAACAATAATGAACA+TGG + chr5_3:18886513-18886532 None:intergenic 30.0%
! GGATTTTACTTTCCTTTTTG+AGG + chr5_3:18886530-18886549 None:intergenic 30.0%
! TTTTGGATGAATTATGGGTT+AGG + chr5_3:18886586-18886605 None:intergenic 30.0%
! GTCTCTGAAAGATAATGAAA+TGG + chr5_3:18886681-18886700 None:intergenic 30.0%
AAAGAAGATTGAAAACGCAA+CGG - chr5_3:18887021-18887040 Msa0803630:intron 30.0%
!!! ACTTTTTCAAAGAGAAGAAG+AGG - chr5_3:18887055-18887074 Msa0803630:CDS 30.0%
! TCATCATTTTCTCTTCTACT+GGG - chr5_3:18887131-18887150 Msa0803630:intron 30.0%
TCTTTGAATACTCCAACTTA+AGG - chr5_3:18887158-18887177 Msa0803630:intron 30.0%
TTCTCTCATGAATGAAAACA+CGG - chr5_3:18887188-18887207 Msa0803630:intron 30.0%
TCTAAACAAATGCACAACAT+AGG + chr5_3:18887456-18887475 None:intergenic 30.0%
! TCACTTGTTAGGATAAAGTT+TGG + chr5_3:18887613-18887632 None:intergenic 30.0%
! TTCACACAAAACACATTTTG+AGG + chr5_3:18887727-18887746 None:intergenic 30.0%
ACATATAAACCTAAACCACT+TGG - chr5_3:18887831-18887850 Msa0803630:intron 30.0%
! CTTCTAAAAACAAAGAACAC+GGG + chr5_3:18888008-18888027 None:intergenic 30.0%
CAAAAAAGTTCCAATCAAAC+GGG - chr5_3:18888197-18888216 Msa0803630:intron 30.0%
TGTGGAAGAATTACAACAAT+TGG - chr5_3:18888653-18888672 Msa0803630:intron 30.0%
AAGAATTACAACAATTGGAG+AGG - chr5_3:18888658-18888677 Msa0803630:intron 30.0%
!!! AGACCTTGTTTTCTATTACA+CGG + chr5_3:18888704-18888723 None:intergenic 30.0%
TCTAAAAAATGTTCCAAGGA+TGG + chr5_3:18889075-18889094 None:intergenic 30.0%
!!! ATCCTTGGAACATTTTTTAG+AGG - chr5_3:18889074-18889093 Msa0803630:intron 30.0%
!!! TTTGTGAACAACTTTTTTGG+TGG + chr5_3:18889270-18889289 None:intergenic 30.0%
!!! CTGTTGTTTTAGAAGATAGA+TGG + chr5_3:18889403-18889422 None:intergenic 30.0%
!! ATCATACATGTTGCTTTAGT+CGG + chr5_3:18889651-18889670 None:intergenic 30.0%
!! CTTGTATATGATGGATCATA+AGG - chr5_3:18889829-18889848 Msa0803630:intron 30.0%
TATGAGAATGTGGTTAATGA+AGG - chr5_3:18889893-18889912 Msa0803630:five_prime_UTR 30.0%
ATCTGAACTCTCATAATCTT+GGG + chr5_3:18889966-18889985 None:intergenic 30.0%
TATCTGAACTCTCATAATCT+TGG + chr5_3:18889967-18889986 None:intergenic 30.0%
GTAAAAAGTAAACCCCTTTA+TGG + chr5_3:18886383-18886402 None:intergenic 30.0%
AAAGAGAGTCAGAAAGAAAA+AGG + chr5_3:18886427-18886446 None:intergenic 30.0%
TGATGTTTATTTGGTTAGTG+AGG + chr5_3:18886482-18886501 None:intergenic 30.0%
TTGAGGAACAATAATGAACA+TGG + chr5_3:18886513-18886532 None:intergenic 30.0%
! GGATTTTACTTTCCTTTTTG+AGG + chr5_3:18886530-18886549 None:intergenic 30.0%
! TTTTGGATGAATTATGGGTT+AGG + chr5_3:18886586-18886605 None:intergenic 30.0%
! GTCTCTGAAAGATAATGAAA+TGG + chr5_3:18886681-18886700 None:intergenic 30.0%
AAAGAAGATTGAAAACGCAA+CGG - chr5_3:18887021-18887040 Msa0803630:intron 30.0%
!!! ACTTTTTCAAAGAGAAGAAG+AGG - chr5_3:18887055-18887074 Msa0803630:CDS 30.0%
! TCATCATTTTCTCTTCTACT+GGG - chr5_3:18887131-18887150 Msa0803630:intron 30.0%
TCTTTGAATACTCCAACTTA+AGG - chr5_3:18887158-18887177 Msa0803630:intron 30.0%
TTCTCTCATGAATGAAAACA+CGG - chr5_3:18887188-18887207 Msa0803630:intron 30.0%
TCTAAACAAATGCACAACAT+AGG + chr5_3:18887456-18887475 None:intergenic 30.0%
! TCACTTGTTAGGATAAAGTT+TGG + chr5_3:18887613-18887632 None:intergenic 30.0%
! TTCACACAAAACACATTTTG+AGG + chr5_3:18887727-18887746 None:intergenic 30.0%
ACATATAAACCTAAACCACT+TGG - chr5_3:18887831-18887850 Msa0803630:intron 30.0%
! CTTCTAAAAACAAAGAACAC+GGG + chr5_3:18888008-18888027 None:intergenic 30.0%
CAAAAAAGTTCCAATCAAAC+GGG - chr5_3:18888197-18888216 Msa0803630:intron 30.0%
TGTGGAAGAATTACAACAAT+TGG - chr5_3:18888653-18888672 Msa0803630:intron 30.0%
AAGAATTACAACAATTGGAG+AGG - chr5_3:18888658-18888677 Msa0803630:intron 30.0%
!!! AGACCTTGTTTTCTATTACA+CGG + chr5_3:18888704-18888723 None:intergenic 30.0%
TCTAAAAAATGTTCCAAGGA+TGG + chr5_3:18889075-18889094 None:intergenic 30.0%
!!! ATCCTTGGAACATTTTTTAG+AGG - chr5_3:18889074-18889093 Msa0803630:intron 30.0%
!!! TTTGTGAACAACTTTTTTGG+TGG + chr5_3:18889270-18889289 None:intergenic 30.0%
!!! CTGTTGTTTTAGAAGATAGA+TGG + chr5_3:18889403-18889422 None:intergenic 30.0%
!! ATCATACATGTTGCTTTAGT+CGG + chr5_3:18889651-18889670 None:intergenic 30.0%
!! CTTGTATATGATGGATCATA+AGG - chr5_3:18889829-18889848 Msa0803630:intron 30.0%
TATGAGAATGTGGTTAATGA+AGG - chr5_3:18889893-18889912 Msa0803630:five_prime_UTR 30.0%
ATCTGAACTCTCATAATCTT+GGG + chr5_3:18889966-18889985 None:intergenic 30.0%
TATCTGAACTCTCATAATCT+TGG + chr5_3:18889967-18889986 None:intergenic 30.0%
ATTGCTTTGCCTTACCATAA+AGG - chr5_3:18886366-18886385 Msa0803630:three_prime_UTR 35.0%
TTGCTTTGCCTTACCATAAA+GGG - chr5_3:18886367-18886386 Msa0803630:three_prime_UTR 35.0%
AAGTAAACCCCTTTATGGTA+AGG + chr5_3:18886378-18886397 None:intergenic 35.0%
AAGAAAAAGGTTGTGTGTGT+GGG + chr5_3:18886414-18886433 None:intergenic 35.0%
AAAGAAAAAGGTTGTGTGTG+TGG + chr5_3:18886415-18886434 None:intergenic 35.0%
! CTTTCTGACTCTCTTTTCAT+TGG - chr5_3:18886431-18886450 Msa0803630:three_prime_UTR 35.0%
GTAGTGTGAAATGTACTTTG+TGG + chr5_3:18886551-18886570 None:intergenic 35.0%
GAAGAAACTGGTGAACAAAT+GGG + chr5_3:18886625-18886644 None:intergenic 35.0%
AGAAGAAACTGGTGAACAAA+TGG + chr5_3:18886626-18886645 None:intergenic 35.0%
ATCCTCTATAGAGAAGAAAC+TGG + chr5_3:18886637-18886656 None:intergenic 35.0%
CTCTATAGAGGATCTAAAAG+AGG - chr5_3:18886644-18886663 Msa0803630:intron 35.0%
ATAGAGGATCTAAAAGAGGA+AGG - chr5_3:18886648-18886667 Msa0803630:intron 35.0%
GACAAAAGAAAGAGAAGTGA+AGG + chr5_3:18886813-18886832 None:intergenic 35.0%
TCTCTCTTTCAATTATACGC+TGG - chr5_3:18886858-18886877 Msa0803630:intron 35.0%
! CTCATCATTTTCTCTTCTAC+TGG - chr5_3:18887130-18887149 Msa0803630:intron 35.0%
GAGAAAGAAAGACCTTAAGT+TGG + chr5_3:18887173-18887192 None:intergenic 35.0%
ACTAAATCACTGATCAGAGT+TGG + chr5_3:18887539-18887558 None:intergenic 35.0%
! CAATTGCACTGAAGAGTTTT+AGG + chr5_3:18887571-18887590 None:intergenic 35.0%
! TGTAACCGATTTCACTTGTT+AGG + chr5_3:18887624-18887643 None:intergenic 35.0%
!! CACAAAACACATTTTGAGGA+GGG + chr5_3:18887723-18887742 None:intergenic 35.0%
!! ACACAAAACACATTTTGAGG+AGG + chr5_3:18887724-18887743 None:intergenic 35.0%
GTATTATTATGTGCACCAAG+TGG + chr5_3:18887849-18887868 None:intergenic 35.0%
CATGATCGATGTCAACTTAA+TGG + chr5_3:18888223-18888242 None:intergenic 35.0%
ATACTGCAGCTAGTTGAAAA+CGG - chr5_3:18888546-18888565 Msa0803630:intron 35.0%
CTAAGAAGAGCCATCAATTA+AGG - chr5_3:18888598-18888617 Msa0803630:intron 35.0%
AGATCTTGAAGGTTTGAATG+TGG - chr5_3:18888635-18888654 Msa0803630:intron 35.0%
GATCAATGATCTCCAAAGAA+AGG - chr5_3:18888832-18888851 Msa0803630:intron 35.0%
TAATTAGATAGAGTCGATGG+AGG - chr5_3:18888908-18888927 Msa0803630:intron 35.0%
! GACCTCTAAAAAATGTTCCA+AGG + chr5_3:18889079-18889098 None:intergenic 35.0%
!! GTGTGTTTGAGTTTTCTAGT+CGG - chr5_3:18889226-18889245 Msa0803630:intron 35.0%
AAAATTCACACACACAAGTG+GGG + chr5_3:18889362-18889381 None:intergenic 35.0%
GAAAATTCACACACACAAGT+GGG + chr5_3:18889363-18889382 None:intergenic 35.0%
TGAAAATTCACACACACAAG+TGG + chr5_3:18889364-18889383 None:intergenic 35.0%
GTTCAGTAAATAAGGGTTGT+AGG + chr5_3:18889596-18889615 None:intergenic 35.0%
!! TATGATGGATCATAAGGTTG+CGG - chr5_3:18889835-18889854 Msa0803630:intron 35.0%
ATGATTAACGACAGAATGGT+TGG - chr5_3:18889860-18889879 Msa0803630:five_prime_UTR 35.0%
AGGTGATGAATATGAGAATG+TGG - chr5_3:18889883-18889902 Msa0803630:five_prime_UTR 35.0%
TCTGAACTCTCATAATCTTG+GGG + chr5_3:18889965-18889984 None:intergenic 35.0%
ATTGCTTTGCCTTACCATAA+AGG - chr5_3:18886366-18886385 Msa0803630:three_prime_UTR 35.0%
TTGCTTTGCCTTACCATAAA+GGG - chr5_3:18886367-18886386 Msa0803630:three_prime_UTR 35.0%
AAGTAAACCCCTTTATGGTA+AGG + chr5_3:18886378-18886397 None:intergenic 35.0%
AAGAAAAAGGTTGTGTGTGT+GGG + chr5_3:18886414-18886433 None:intergenic 35.0%
AAAGAAAAAGGTTGTGTGTG+TGG + chr5_3:18886415-18886434 None:intergenic 35.0%
! CTTTCTGACTCTCTTTTCAT+TGG - chr5_3:18886431-18886450 Msa0803630:three_prime_UTR 35.0%
GTAGTGTGAAATGTACTTTG+TGG + chr5_3:18886551-18886570 None:intergenic 35.0%
GAAGAAACTGGTGAACAAAT+GGG + chr5_3:18886625-18886644 None:intergenic 35.0%
AGAAGAAACTGGTGAACAAA+TGG + chr5_3:18886626-18886645 None:intergenic 35.0%
ATCCTCTATAGAGAAGAAAC+TGG + chr5_3:18886637-18886656 None:intergenic 35.0%
CTCTATAGAGGATCTAAAAG+AGG - chr5_3:18886644-18886663 Msa0803630:intron 35.0%
ATAGAGGATCTAAAAGAGGA+AGG - chr5_3:18886648-18886667 Msa0803630:intron 35.0%
GACAAAAGAAAGAGAAGTGA+AGG + chr5_3:18886813-18886832 None:intergenic 35.0%
TCTCTCTTTCAATTATACGC+TGG - chr5_3:18886858-18886877 Msa0803630:intron 35.0%
! CTCATCATTTTCTCTTCTAC+TGG - chr5_3:18887130-18887149 Msa0803630:intron 35.0%
GAGAAAGAAAGACCTTAAGT+TGG + chr5_3:18887173-18887192 None:intergenic 35.0%
ACTAAATCACTGATCAGAGT+TGG + chr5_3:18887539-18887558 None:intergenic 35.0%
! CAATTGCACTGAAGAGTTTT+AGG + chr5_3:18887571-18887590 None:intergenic 35.0%
! TGTAACCGATTTCACTTGTT+AGG + chr5_3:18887624-18887643 None:intergenic 35.0%
!! CACAAAACACATTTTGAGGA+GGG + chr5_3:18887723-18887742 None:intergenic 35.0%
!! ACACAAAACACATTTTGAGG+AGG + chr5_3:18887724-18887743 None:intergenic 35.0%
GTATTATTATGTGCACCAAG+TGG + chr5_3:18887849-18887868 None:intergenic 35.0%
CATGATCGATGTCAACTTAA+TGG + chr5_3:18888223-18888242 None:intergenic 35.0%
ATACTGCAGCTAGTTGAAAA+CGG - chr5_3:18888546-18888565 Msa0803630:intron 35.0%
CTAAGAAGAGCCATCAATTA+AGG - chr5_3:18888598-18888617 Msa0803630:intron 35.0%
AGATCTTGAAGGTTTGAATG+TGG - chr5_3:18888635-18888654 Msa0803630:intron 35.0%
GATCAATGATCTCCAAAGAA+AGG - chr5_3:18888832-18888851 Msa0803630:intron 35.0%
TAATTAGATAGAGTCGATGG+AGG - chr5_3:18888908-18888927 Msa0803630:intron 35.0%
! GACCTCTAAAAAATGTTCCA+AGG + chr5_3:18889079-18889098 None:intergenic 35.0%
!! GTGTGTTTGAGTTTTCTAGT+CGG - chr5_3:18889226-18889245 Msa0803630:intron 35.0%
AAAATTCACACACACAAGTG+GGG + chr5_3:18889362-18889381 None:intergenic 35.0%
GAAAATTCACACACACAAGT+GGG + chr5_3:18889363-18889382 None:intergenic 35.0%
TGAAAATTCACACACACAAG+TGG + chr5_3:18889364-18889383 None:intergenic 35.0%
GTTCAGTAAATAAGGGTTGT+AGG + chr5_3:18889596-18889615 None:intergenic 35.0%
!! TATGATGGATCATAAGGTTG+CGG - chr5_3:18889835-18889854 Msa0803630:intron 35.0%
ATGATTAACGACAGAATGGT+TGG - chr5_3:18889860-18889879 Msa0803630:five_prime_UTR 35.0%
AGGTGATGAATATGAGAATG+TGG - chr5_3:18889883-18889902 Msa0803630:five_prime_UTR 35.0%
TCTGAACTCTCATAATCTTG+GGG + chr5_3:18889965-18889984 None:intergenic 35.0%
TATGGTAAGGCAAAGCAATG+TGG + chr5_3:18886365-18886384 None:intergenic 40.0%
TGCTTTGCCTTACCATAAAG+GGG - chr5_3:18886368-18886387 Msa0803630:three_prime_UTR 40.0%
AGAAAAAGGTTGTGTGTGTG+GGG + chr5_3:18886413-18886432 None:intergenic 40.0%
! TCTGACTCTCTTTTCATTGG+TGG - chr5_3:18886434-18886453 Msa0803630:three_prime_UTR 40.0%
!! TGGATGAATTATGGGTTAGG+AGG + chr5_3:18886583-18886602 None:intergenic 40.0%
CACCAGTTTCTTCTCTATAG+AGG - chr5_3:18886632-18886651 Msa0803630:intron 40.0%
ATGAAATGATGCAGTCATGC+AGG + chr5_3:18886739-18886758 None:intergenic 40.0%
!! AAACACATTTTGAGGAGGGA+CGG + chr5_3:18887719-18887738 None:intergenic 40.0%
AGAGTGGTTGAATTGGACAA+GGG + chr5_3:18887793-18887812 None:intergenic 40.0%
TCCAATTCAACCACTCTCAT+AGG - chr5_3:18887796-18887815 Msa0803630:intron 40.0%
TCCTATGAGAGTGGTTGAAT+TGG + chr5_3:18887800-18887819 None:intergenic 40.0%
TCTGTACTATCCTATGAGAG+TGG + chr5_3:18887809-18887828 None:intergenic 40.0%
TTATGTGCACCAAGTGGTTT+AGG + chr5_3:18887843-18887862 None:intergenic 40.0%
ATCCATGTGAACATTGCACA+GGG + chr5_3:18887871-18887890 None:intergenic 40.0%
TATCCATGTGAACATTGCAC+AGG + chr5_3:18887872-18887891 None:intergenic 40.0%
AACTTAATGGCCCGTTTGAT+TGG + chr5_3:18888210-18888229 None:intergenic 40.0%
TTGTGTTATGATGAAGCGTG+AGG - chr5_3:18888289-18888308 Msa0803630:intron 40.0%
TGTGTTATGATGAAGCGTGA+GGG - chr5_3:18888290-18888309 Msa0803630:intron 40.0%
! CAACTGTTCTAGATTGAGCA+AGG - chr5_3:18888569-18888588 Msa0803630:intron 40.0%
CCATCAATTAAGGCAGATGA+GGG - chr5_3:18888608-18888627 Msa0803630:intron 40.0%
CATCAATTAAGGCAGATGAG+GGG - chr5_3:18888609-18888628 Msa0803630:intron 40.0%
TTGGAGAGGTCACTTGAAAT+TGG - chr5_3:18888672-18888691 Msa0803630:intron 40.0%
TGGAGAGGTCACTTGAAATT+GGG - chr5_3:18888673-18888692 Msa0803630:intron 40.0%
AGGTCACTTGAAATTGGGTT+GGG - chr5_3:18888678-18888697 Msa0803630:intron 40.0%
AAATTGTAAGGGTCCATCCT+TGG - chr5_3:18889059-18889078 Msa0803630:intron 40.0%
CCTGCAGGTTCAGTAAATAA+GGG + chr5_3:18889603-18889622 None:intergenic 40.0%
! CCTTATTTACTGAACCTGCA+GGG - chr5_3:18889601-18889620 Msa0803630:CDS 40.0%
!! ATGATGGATCATAAGGTTGC+GGG - chr5_3:18889836-18889855 Msa0803630:intron 40.0%
ATTAACGACAGAATGGTTGG+AGG - chr5_3:18889863-18889882 Msa0803630:five_prime_UTR 40.0%
ACCAACGTTTACAACTCCAT+TGG - chr5_3:18889935-18889954 Msa0803630:five_prime_UTR 40.0%
ACCAATGGAGTTGTAAACGT+TGG + chr5_3:18889939-18889958 None:intergenic 40.0%
TTCAGATACATCGCTCAAGT+TGG - chr5_3:18889979-18889998 Msa0803630:five_prime_UTR 40.0%
TCAGATACATCGCTCAAGTT+GGG - chr5_3:18889980-18889999 Msa0803630:five_prime_UTR 40.0%
CGCTTTCATGTACTATTTGC+AGG - chr5_3:18890145-18890164 Msa0803630:five_prime_UTR 40.0%
TGTGTTTGGATTGAGGGTTT+AGG - chr5_3:18890218-18890237 Msa0803630:five_prime_UTR 40.0%
TTTGGATTGAGGGTTTAGGA+AGG - chr5_3:18890222-18890241 Msa0803630:five_prime_UTR 40.0%
TTGGATTGAGGGTTTAGGAA+GGG - chr5_3:18890223-18890242 Msa0803630:five_prime_UTR 40.0%
TATGGTAAGGCAAAGCAATG+TGG + chr5_3:18886365-18886384 None:intergenic 40.0%
TGCTTTGCCTTACCATAAAG+GGG - chr5_3:18886368-18886387 Msa0803630:three_prime_UTR 40.0%
AGAAAAAGGTTGTGTGTGTG+GGG + chr5_3:18886413-18886432 None:intergenic 40.0%
! TCTGACTCTCTTTTCATTGG+TGG - chr5_3:18886434-18886453 Msa0803630:three_prime_UTR 40.0%
!! TGGATGAATTATGGGTTAGG+AGG + chr5_3:18886583-18886602 None:intergenic 40.0%
CACCAGTTTCTTCTCTATAG+AGG - chr5_3:18886632-18886651 Msa0803630:intron 40.0%
ATGAAATGATGCAGTCATGC+AGG + chr5_3:18886739-18886758 None:intergenic 40.0%
!! AAACACATTTTGAGGAGGGA+CGG + chr5_3:18887719-18887738 None:intergenic 40.0%
AGAGTGGTTGAATTGGACAA+GGG + chr5_3:18887793-18887812 None:intergenic 40.0%
TCCAATTCAACCACTCTCAT+AGG - chr5_3:18887796-18887815 Msa0803630:intron 40.0%
TCCTATGAGAGTGGTTGAAT+TGG + chr5_3:18887800-18887819 None:intergenic 40.0%
TCTGTACTATCCTATGAGAG+TGG + chr5_3:18887809-18887828 None:intergenic 40.0%
TTATGTGCACCAAGTGGTTT+AGG + chr5_3:18887843-18887862 None:intergenic 40.0%
ATCCATGTGAACATTGCACA+GGG + chr5_3:18887871-18887890 None:intergenic 40.0%
TATCCATGTGAACATTGCAC+AGG + chr5_3:18887872-18887891 None:intergenic 40.0%
AACTTAATGGCCCGTTTGAT+TGG + chr5_3:18888210-18888229 None:intergenic 40.0%
TTGTGTTATGATGAAGCGTG+AGG - chr5_3:18888289-18888308 Msa0803630:intron 40.0%
TGTGTTATGATGAAGCGTGA+GGG - chr5_3:18888290-18888309 Msa0803630:intron 40.0%
! CAACTGTTCTAGATTGAGCA+AGG - chr5_3:18888569-18888588 Msa0803630:intron 40.0%
CCATCAATTAAGGCAGATGA+GGG - chr5_3:18888608-18888627 Msa0803630:intron 40.0%
CATCAATTAAGGCAGATGAG+GGG - chr5_3:18888609-18888628 Msa0803630:intron 40.0%
TTGGAGAGGTCACTTGAAAT+TGG - chr5_3:18888672-18888691 Msa0803630:intron 40.0%
TGGAGAGGTCACTTGAAATT+GGG - chr5_3:18888673-18888692 Msa0803630:intron 40.0%
AGGTCACTTGAAATTGGGTT+GGG - chr5_3:18888678-18888697 Msa0803630:intron 40.0%
AAATTGTAAGGGTCCATCCT+TGG - chr5_3:18889059-18889078 Msa0803630:intron 40.0%
CCTGCAGGTTCAGTAAATAA+GGG + chr5_3:18889603-18889622 None:intergenic 40.0%
! CCTTATTTACTGAACCTGCA+GGG - chr5_3:18889601-18889620 Msa0803630:CDS 40.0%
!! ATGATGGATCATAAGGTTGC+GGG - chr5_3:18889836-18889855 Msa0803630:intron 40.0%
ATTAACGACAGAATGGTTGG+AGG - chr5_3:18889863-18889882 Msa0803630:five_prime_UTR 40.0%
ACCAACGTTTACAACTCCAT+TGG - chr5_3:18889935-18889954 Msa0803630:five_prime_UTR 40.0%
ACCAATGGAGTTGTAAACGT+TGG + chr5_3:18889939-18889958 None:intergenic 40.0%
TTCAGATACATCGCTCAAGT+TGG - chr5_3:18889979-18889998 Msa0803630:five_prime_UTR 40.0%
TCAGATACATCGCTCAAGTT+GGG - chr5_3:18889980-18889999 Msa0803630:five_prime_UTR 40.0%
CGCTTTCATGTACTATTTGC+AGG - chr5_3:18890145-18890164 Msa0803630:five_prime_UTR 40.0%
TGTGTTTGGATTGAGGGTTT+AGG - chr5_3:18890218-18890237 Msa0803630:five_prime_UTR 40.0%
TTTGGATTGAGGGTTTAGGA+AGG - chr5_3:18890222-18890241 Msa0803630:five_prime_UTR 40.0%
TTGGATTGAGGGTTTAGGAA+GGG - chr5_3:18890223-18890242 Msa0803630:five_prime_UTR 40.0%
ACTCATACCCTAGTGACCTT+TGG - chr5_3:18886327-18886346 Msa0803630:three_prime_UTR 45.0%
TCGTCTTCCAAAGGTCACTA+GGG + chr5_3:18886337-18886356 None:intergenic 45.0%
GAAACTGGTGAACAAATGGG+TGG + chr5_3:18886622-18886641 None:intergenic 45.0%
!!! GCACTGAAGAGTTTTAGGTG+TGG + chr5_3:18887566-18887585 None:intergenic 45.0%
GAGAGTGGTTGAATTGGACA+AGG + chr5_3:18887794-18887813 None:intergenic 45.0%
TACCCTGTGCAATGTTCACA+TGG - chr5_3:18887866-18887885 Msa0803630:CDS 45.0%
GCGTGAGGGAAATACTTGAA+AGG - chr5_3:18888304-18888323 Msa0803630:intron 45.0%
GCCATCAATTAAGGCAGATG+AGG - chr5_3:18888607-18888626 Msa0803630:intron 45.0%
CCCTCATCTGCCTTAATTGA+TGG + chr5_3:18888611-18888630 None:intergenic 45.0%
ATGAGGGGAGAAGATCTTGA+AGG - chr5_3:18888624-18888643 Msa0803630:intron 45.0%
GAGGTCACTTGAAATTGGGT+TGG - chr5_3:18888677-18888696 Msa0803630:intron 45.0%
GGGCCGTGTAATAGAAAACA+AGG - chr5_3:18888698-18888717 Msa0803630:intron 45.0%
TCAGGGAGAGAAGATCATGA+TGG - chr5_3:18888808-18888827 Msa0803630:intron 45.0%
! CCCTTATTTACTGAACCTGC+AGG - chr5_3:18889600-18889619 Msa0803630:CDS 45.0%
CCCTGCAGGTTCAGTAAATA+AGG + chr5_3:18889604-18889623 None:intergenic 45.0%
ATTTACTGAACCTGCAGGGA+AGG - chr5_3:18889605-18889624 Msa0803630:CDS 45.0%
GGGCATGATTAACGACAGAA+TGG - chr5_3:18889856-18889875 Msa0803630:five_prime_UTR 45.0%
!! AACGTTGGTGACAGATTCTG+AGG + chr5_3:18889924-18889943 None:intergenic 45.0%
ATAATCTTGGGGAGGACCAA+TGG + chr5_3:18889954-18889973 None:intergenic 45.0%
GAACTCTCATAATCTTGGGG+AGG + chr5_3:18889962-18889981 None:intergenic 45.0%
! CAGATACATCGCTCAAGTTG+GGG - chr5_3:18889981-18890000 Msa0803630:five_prime_UTR 45.0%
CACACAAACATTCCTTCAGC+CGG + chr5_3:18890181-18890200 None:intergenic 45.0%
TGAAGGAATGTTTGTGTGCG+AGG - chr5_3:18890183-18890202 Msa0803630:five_prime_UTR 45.0%
GAAGGAATGTTTGTGTGCGA+GGG - chr5_3:18890184-18890203 Msa0803630:five_prime_UTR 45.0%
TTGTGTGCGAGGGATTAAAC+TGG - chr5_3:18890194-18890213 Msa0803630:five_prime_UTR 45.0%
TGTGTGCGAGGGATTAAACT+GGG - chr5_3:18890195-18890214 Msa0803630:five_prime_UTR 45.0%
GGGATTAAACTGGGTGTGTT+TGG - chr5_3:18890204-18890223 Msa0803630:five_prime_UTR 45.0%
AACTGGGTGTGTTTGGATTG+AGG - chr5_3:18890211-18890230 Msa0803630:five_prime_UTR 45.0%
ACTGGGTGTGTTTGGATTGA+GGG - chr5_3:18890212-18890231 Msa0803630:five_prime_UTR 45.0%
ACTCATACCCTAGTGACCTT+TGG - chr5_3:18886327-18886346 Msa0803630:three_prime_UTR 45.0%
TCGTCTTCCAAAGGTCACTA+GGG + chr5_3:18886337-18886356 None:intergenic 45.0%
GAAACTGGTGAACAAATGGG+TGG + chr5_3:18886622-18886641 None:intergenic 45.0%
!!! GCACTGAAGAGTTTTAGGTG+TGG + chr5_3:18887566-18887585 None:intergenic 45.0%
GAGAGTGGTTGAATTGGACA+AGG + chr5_3:18887794-18887813 None:intergenic 45.0%
TACCCTGTGCAATGTTCACA+TGG - chr5_3:18887866-18887885 Msa0803630:CDS 45.0%
GCGTGAGGGAAATACTTGAA+AGG - chr5_3:18888304-18888323 Msa0803630:intron 45.0%
GCCATCAATTAAGGCAGATG+AGG - chr5_3:18888607-18888626 Msa0803630:intron 45.0%
CCCTCATCTGCCTTAATTGA+TGG + chr5_3:18888611-18888630 None:intergenic 45.0%
ATGAGGGGAGAAGATCTTGA+AGG - chr5_3:18888624-18888643 Msa0803630:intron 45.0%
GAGGTCACTTGAAATTGGGT+TGG - chr5_3:18888677-18888696 Msa0803630:intron 45.0%
GGGCCGTGTAATAGAAAACA+AGG - chr5_3:18888698-18888717 Msa0803630:intron 45.0%
TCAGGGAGAGAAGATCATGA+TGG - chr5_3:18888808-18888827 Msa0803630:intron 45.0%
! CCCTTATTTACTGAACCTGC+AGG - chr5_3:18889600-18889619 Msa0803630:CDS 45.0%
CCCTGCAGGTTCAGTAAATA+AGG + chr5_3:18889604-18889623 None:intergenic 45.0%
ATTTACTGAACCTGCAGGGA+AGG - chr5_3:18889605-18889624 Msa0803630:CDS 45.0%
GGGCATGATTAACGACAGAA+TGG - chr5_3:18889856-18889875 Msa0803630:five_prime_UTR 45.0%
!! AACGTTGGTGACAGATTCTG+AGG + chr5_3:18889924-18889943 None:intergenic 45.0%
ATAATCTTGGGGAGGACCAA+TGG + chr5_3:18889954-18889973 None:intergenic 45.0%
GAACTCTCATAATCTTGGGG+AGG + chr5_3:18889962-18889981 None:intergenic 45.0%
! CAGATACATCGCTCAAGTTG+GGG - chr5_3:18889981-18890000 Msa0803630:five_prime_UTR 45.0%
CACACAAACATTCCTTCAGC+CGG + chr5_3:18890181-18890200 None:intergenic 45.0%
TGAAGGAATGTTTGTGTGCG+AGG - chr5_3:18890183-18890202 Msa0803630:five_prime_UTR 45.0%
GAAGGAATGTTTGTGTGCGA+GGG - chr5_3:18890184-18890203 Msa0803630:five_prime_UTR 45.0%
TTGTGTGCGAGGGATTAAAC+TGG - chr5_3:18890194-18890213 Msa0803630:five_prime_UTR 45.0%
TGTGTGCGAGGGATTAAACT+GGG - chr5_3:18890195-18890214 Msa0803630:five_prime_UTR 45.0%
GGGATTAAACTGGGTGTGTT+TGG - chr5_3:18890204-18890223 Msa0803630:five_prime_UTR 45.0%
AACTGGGTGTGTTTGGATTG+AGG - chr5_3:18890211-18890230 Msa0803630:five_prime_UTR 45.0%
ACTGGGTGTGTTTGGATTGA+GGG - chr5_3:18890212-18890231 Msa0803630:five_prime_UTR 45.0%
!!! ATTTTTTAAATTTCTAAAAA+TGG - chr5_3:18887288-18887307 Msa0803630:intron 5.0%
!! AATAACAAAAATTTAAAAAT+AGG - chr5_3:18889138-18889157 Msa0803630:intron 5.0%
!!! ATTTTTTAAATTTCTAAAAA+TGG - chr5_3:18887288-18887307 Msa0803630:intron 5.0%
!! AATAACAAAAATTTAAAAAT+AGG - chr5_3:18889138-18889157 Msa0803630:intron 5.0%
CTCGTCTTCCAAAGGTCACT+AGG + chr5_3:18886338-18886357 None:intergenic 50.0%
GATGCAGTCATGCAGGCATT+TGG + chr5_3:18886732-18886751 None:intergenic 50.0%
AGATTGAAAACGCAACGGCG+AGG - chr5_3:18887026-18887045 Msa0803630:intron 50.0%
!! TTTTGAGGAGGGACGGACAT+AGG + chr5_3:18887712-18887731 None:intergenic 50.0%
GACGCGATGAGCTTTACAAG+TGG + chr5_3:18887771-18887790 None:intergenic 50.0%
CTCAAAGAACCTCGCAAAGC+TGG - chr5_3:18888338-18888357 Msa0803630:CDS 50.0%
! AGAACCGTCTCTTGAGTTGC+AGG - chr5_3:18888362-18888381 Msa0803630:CDS 50.0%
CCAACCTGCAACTCAAGAGA+CGG + chr5_3:18888369-18888388 None:intergenic 50.0%
ACACACAAGTGGGGAATCTC+TGG + chr5_3:18889353-18889372 None:intergenic 50.0%
!! ATACATCGCTCAAGTTGGGG+TGG - chr5_3:18889984-18890003 Msa0803630:five_prime_UTR 50.0%
!! TACATCGCTCAAGTTGGGGT+GGG - chr5_3:18889985-18890004 Msa0803630:five_prime_UTR 50.0%
ATTTGCAGGCTCCCATATGC+CGG - chr5_3:18890159-18890178 Msa0803630:five_prime_UTR 50.0%
CATTCCTTCAGCCGGCATAT+GGG + chr5_3:18890173-18890192 None:intergenic 50.0%
ACATTCCTTCAGCCGGCATA+TGG + chr5_3:18890174-18890193 None:intergenic 50.0%
GATTGAGGGTTTAGGAAGGG+AGG - chr5_3:18890226-18890245 Msa0803630:five_prime_UTR 50.0%
CTCGTCTTCCAAAGGTCACT+AGG + chr5_3:18886338-18886357 None:intergenic 50.0%
GATGCAGTCATGCAGGCATT+TGG + chr5_3:18886732-18886751 None:intergenic 50.0%
AGATTGAAAACGCAACGGCG+AGG - chr5_3:18887026-18887045 Msa0803630:intron 50.0%
!! TTTTGAGGAGGGACGGACAT+AGG + chr5_3:18887712-18887731 None:intergenic 50.0%
GACGCGATGAGCTTTACAAG+TGG + chr5_3:18887771-18887790 None:intergenic 50.0%
CTCAAAGAACCTCGCAAAGC+TGG - chr5_3:18888338-18888357 Msa0803630:CDS 50.0%
! AGAACCGTCTCTTGAGTTGC+AGG - chr5_3:18888362-18888381 Msa0803630:CDS 50.0%
CCAACCTGCAACTCAAGAGA+CGG + chr5_3:18888369-18888388 None:intergenic 50.0%
ACACACAAGTGGGGAATCTC+TGG + chr5_3:18889353-18889372 None:intergenic 50.0%
!! ATACATCGCTCAAGTTGGGG+TGG - chr5_3:18889984-18890003 Msa0803630:five_prime_UTR 50.0%
!! TACATCGCTCAAGTTGGGGT+GGG - chr5_3:18889985-18890004 Msa0803630:five_prime_UTR 50.0%
ATTTGCAGGCTCCCATATGC+CGG - chr5_3:18890159-18890178 Msa0803630:five_prime_UTR 50.0%
CATTCCTTCAGCCGGCATAT+GGG + chr5_3:18890173-18890192 None:intergenic 50.0%
ACATTCCTTCAGCCGGCATA+TGG + chr5_3:18890174-18890193 None:intergenic 50.0%
GATTGAGGGTTTAGGAAGGG+AGG - chr5_3:18890226-18890245 Msa0803630:five_prime_UTR 50.0%
ACGGTTCTTCCAGCTTTGCG+AGG + chr5_3:18888350-18888369 None:intergenic 55.0%
! CCGTCTCTTGAGTTGCAGGT+TGG - chr5_3:18888366-18888385 Msa0803630:CDS 55.0%
ACGGTTCTTCCAGCTTTGCG+AGG + chr5_3:18888350-18888369 None:intergenic 55.0%
! CCGTCTCTTGAGTTGCAGGT+TGG - chr5_3:18888366-18888385 Msa0803630:CDS 55.0%
GTGGCTCGCTCGTCTTCCAA+AGG + chr5_3:18886346-18886365 None:intergenic 60.0%
CCATCAGTTGCCTTCCCTGC+AGG + chr5_3:18889618-18889637 None:intergenic 60.0%
CCTGCAGGGAAGGCAACTGA+TGG - chr5_3:18889615-18889634 Msa0803630:CDS 60.0%
GTGGCTCGCTCGTCTTCCAA+AGG + chr5_3:18886346-18886365 None:intergenic 60.0%
CCATCAGTTGCCTTCCCTGC+AGG + chr5_3:18889618-18889637 None:intergenic 60.0%
CCTGCAGGGAAGGCAACTGA+TGG - chr5_3:18889615-18889634 Msa0803630:CDS 60.0%
! GGCTCCCATATGCCGGCTGA+AGG - chr5_3:18890166-18890185 Msa0803630:five_prime_UTR 65.0%
! GGCTCCCATATGCCGGCTGA+AGG - chr5_3:18890166-18890185 Msa0803630:five_prime_UTR 65.0%
Chromosome Type Strat End Strand Name
chr5_3 gene 18886297 18890403 18886297 ID=Msa0803630;Name=Msa0803630
chr5_3 mRNA 18886297 18890403 18886297 ID=Msa0803630-mRNA-1;Parent=Msa0803630;Name=Msa0803630-mRNA-1;_AED=0.17;_eAED=0.17;_QI=574|1|1|1|0.71|0.62|8|218|226
chr5_3 exon 18886297 18886533 18886297 ID=Msa0803630-mRNA-1:exon:7793;Parent=Msa0803630-mRNA-1
chr5_3 exon 18886698 18886849 18886698 ID=Msa0803630-mRNA-1:exon:7792;Parent=Msa0803630-mRNA-1
chr5_3 exon 18887037 18887078 18887037 ID=Msa0803630-mRNA-1:exon:7791;Parent=Msa0803630-mRNA-1
chr5_3 exon 18887847 18887888 18887847 ID=Msa0803630-mRNA-1:exon:7790;Parent=Msa0803630-mRNA-1
chr5_3 exon 18887981 18888145 18887981 ID=Msa0803630-mRNA-1:exon:7789;Parent=Msa0803630-mRNA-1
chr5_3 exon 18888317 18888395 18888317 ID=Msa0803630-mRNA-1:exon:7788;Parent=Msa0803630-mRNA-1
chr5_3 exon 18889521 18889727 18889521 ID=Msa0803630-mRNA-1:exon:7787;Parent=Msa0803630-mRNA-1
chr5_3 exon 18889855 18890403 18889855 ID=Msa0803630-mRNA-1:exon:7786;Parent=Msa0803630-mRNA-1
chr5_3 five_prime_UTR 18889855 18890403 18889855 ID=Msa0803630-mRNA-1:five_prime_utr;Parent=Msa0803630-mRNA-1
chr5_3 five_prime_UTR 18889703 18889727 18889703 ID=Msa0803630-mRNA-1:five_prime_utr;Parent=Msa0803630-mRNA-1
chr5_3 CDS 18889521 18889702 18889521 ID=Msa0803630-mRNA-1:cds;Parent=Msa0803630-mRNA-1
chr5_3 CDS 18888317 18888395 18888317 ID=Msa0803630-mRNA-1:cds;Parent=Msa0803630-mRNA-1
chr5_3 CDS 18887981 18888145 18887981 ID=Msa0803630-mRNA-1:cds;Parent=Msa0803630-mRNA-1
chr5_3 CDS 18887847 18887888 18887847 ID=Msa0803630-mRNA-1:cds;Parent=Msa0803630-mRNA-1
chr5_3 CDS 18887037 18887078 18887037 ID=Msa0803630-mRNA-1:cds;Parent=Msa0803630-mRNA-1
chr5_3 CDS 18886698 18886849 18886698 ID=Msa0803630-mRNA-1:cds;Parent=Msa0803630-mRNA-1
chr5_3 CDS 18886515 18886533 18886515 ID=Msa0803630-mRNA-1:cds;Parent=Msa0803630-mRNA-1
chr5_3 three_prime_UTR 18886297 18886514 18886297 ID=Msa0803630-mRNA-1:three_prime_utr;Parent=Msa0803630-mRNA-1
Gene Sequence

>Msa0803630

ATGGCTCGTGAGAAGATTCAGATAAAGAAGATTGAAAACGCAACGGCGAGGCAAGTGACTTTTTCAAAGAGAAGAAGAGGATTAATCAAAAAGGCTGAAGAACTCTCAGTTTTGTGTGATGCTGATGTTGCTCTCATCATTTTCTCTTCTACTGGGAAACTCTTTGAATACTCCAACTTAAGCGTGAGGGAAATACTTGAAAGGCATCATTTGCACTCAAAGAACCTCGCAAAGCTGGAAGAACCGTCTCTTGAGTTGCAGCTAGTTGAAAACGGCAACTGTTCTAGATTGAGCAAGGAAGTTGCTAAGAAGAGCCATCAATTAAGGCAGATGAGGGGAGAAGATCTTGAAGGTTTGAATGTGGAAGAATTACAACAATTGGAGAGGTCACTTGAAATTGGGTTGGGCCGTGTAATAGAAAACAAGGGAGAGAAGATCATGATGGAGATCAATGATCTCCAAAGAAAGGGAAGGCAACTGATGGAAGAGAACGACCGACTAAAGCAACATGTTGCGGGCATGATTAACGACAGAATGGTTGGAGGTGATGAATATGAGAATGTGGTTAATGAAGGTCAATCCTCAGAATCTGTCACCAACGTTTACAACTCCATTGGTCCTCCCCAAGATTATGAGAGTTCAGATACATCGCTCAAGTTGGGGCTCCCATATGCCGGCTGA
Protein sequence

>Msa0803630

MAREKIQIKKIENATARQVTFSKRRRGLIKKAEELSVLCDADVALIIFSSTGKLFEYSNLSVREILERHHLHSKNLAKLEEPSLELQLVENGNCSRLSKEVAKKSHQLRQMRGEDLEGLNVEELQQLERSLEIGLGRVIENKGEKIMMEINDLQRKGRQLMEENDRLKQHVAGMINDRMVGGDEYENVVNEGQSSESVTNVYNSIGPPQDYESSDTSLKLGLPYAG*