AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0343190

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0343190 MtrunA17_Chr5g0402191 93.734 383 3 1 102 484 36 397 0.0 721
Msa0343190 MtrunA17_Chr5g0402191 30.311 386 161 10 1 296 1 368 1.36e-37 142
Msa0343190 MtrunA17_Chr8g0375101 67.939 393 59 5 102 484 36 371 4.99e-173 491
Msa0343190 MtrunA17_Chr8g0375101 30.857 350 150 9 1 266 1 342 3.70e-37 140
Msa0343190 MtrunA17_Chr3g0135111 29.487 234 111 4 159 388 11 194 5.53e-23 100
Msa0343190 MtrunA17_Chr3g0135111 32.237 152 83 2 104 235 44 195 4.25e-18 85.9
Msa0343190 MtrunA17_Chr2g0290191 36.913 149 79 3 102 235 36 184 1.40e-22 100
Msa0343190 MtrunA17_Chr2g0290191 37.500 112 67 1 313 424 5 113 1.11e-11 67.0
Msa0343190 MtrunA17_Chr6g0449481 32.609 138 91 1 102 237 77 214 1.10e-21 96.7
Msa0343190 MtrunA17_Chr6g0449481 39.623 106 59 4 311 411 132 237 9.49e-11 63.5
Msa0343190 MtrunA17_Chr3g0101061 34.014 147 84 2 102 235 72 218 1.72e-21 97.4
Msa0343190 MtrunA17_Chr3g0101061 25.311 241 125 5 149 388 31 217 1.28e-16 82.4
Msa0343190 MtrunA17_Chr1g0186351 35.099 151 79 2 104 235 40 190 6.87e-21 95.1
Msa0343190 MtrunA17_Chr1g0186351 43.182 88 48 2 311 397 111 197 6.23e-12 67.8
Msa0343190 MtrunA17_Chr5g0447761 34.694 147 83 2 102 235 38 184 1.31e-20 94.4
Msa0343190 MtrunA17_Chr5g0447761 26.407 231 115 5 159 388 7 183 2.28e-16 81.6
Msa0343190 MtrunA17_Chr3g0120721 30.882 136 92 1 102 235 50 185 2.18e-20 92.4
Msa0343190 MtrunA17_Chr4g0026301 24.901 253 164 6 8 236 114 364 5.25e-15 77.4
Msa0343190 MtrunA17_Chr7g0217261 25.597 293 190 10 8 274 353 643 3.08e-11 65.9
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0343190 AT4G36960.1 64.722 360 87 5 102 442 35 373 6.62e-152 438
Msa0343190 AT4G36960.1 32.418 182 83 5 3 153 2 174 9.41e-19 88.2
Msa0343190 AT4G36960.2 64.722 360 87 5 102 442 35 373 6.62e-152 438
Msa0343190 AT4G36960.2 32.418 182 83 5 3 153 2 174 9.41e-19 88.2
Msa0343190 AT3G07810.2 36.913 149 79 2 102 235 38 186 1.49e-22 100
Msa0343190 AT3G07810.1 36.913 149 79 2 102 235 38 186 1.50e-22 100
Msa0343190 AT4G26650.1 32.240 183 93 4 79 235 23 200 2.55e-22 99.8
Msa0343190 AT4G26650.1 36.975 119 63 2 313 424 16 129 5.22e-11 65.1
Msa0343190 AT4G26650.2 32.240 183 93 4 79 235 20 197 2.59e-22 99.8
Msa0343190 AT4G26650.2 36.975 119 63 2 313 424 13 126 5.23e-11 65.1
Msa0343190 AT5G55550.5 33.557 149 82 2 104 235 40 188 6.96e-22 98.6
Msa0343190 AT5G55550.5 26.840 231 118 4 159 388 7 187 1.64e-17 85.1
Msa0343190 AT5G55550.4 33.557 149 82 2 104 235 40 188 6.96e-22 98.6
Msa0343190 AT5G55550.4 26.840 231 118 4 159 388 7 187 1.64e-17 85.1
Msa0343190 AT5G55550.9 33.557 149 82 2 104 235 40 188 6.96e-22 98.6
Msa0343190 AT5G55550.9 26.840 231 118 4 159 388 7 187 1.64e-17 85.1
Msa0343190 AT5G55550.7 33.557 149 82 2 104 235 40 188 6.96e-22 98.6
Msa0343190 AT5G55550.7 26.840 231 118 4 159 388 7 187 1.64e-17 85.1
Msa0343190 AT5G55550.1 33.557 149 82 2 104 235 40 188 6.96e-22 98.6
Msa0343190 AT5G55550.1 26.840 231 118 4 159 388 7 187 1.64e-17 85.1
Msa0343190 AT5G55550.2 33.557 149 82 2 104 235 40 188 7.37e-22 98.6
Msa0343190 AT5G55550.2 26.840 231 118 4 159 388 7 187 1.63e-17 85.5
Msa0343190 AT5G55550.3 33.557 149 82 2 104 235 40 188 7.37e-22 98.6
Msa0343190 AT5G55550.3 26.840 231 118 4 159 388 7 187 1.63e-17 85.5
Msa0343190 AT5G55550.6 33.557 149 82 2 104 235 40 188 7.37e-22 98.6
Msa0343190 AT5G55550.6 26.840 231 118 4 159 388 7 187 1.63e-17 85.5
Msa0343190 AT5G55550.11 33.557 149 82 2 104 235 40 188 7.37e-22 98.6
Msa0343190 AT5G55550.11 26.840 231 118 4 159 388 7 187 1.63e-17 85.5
Msa0343190 AT1G17640.2 37.415 147 87 2 102 243 98 244 9.66e-22 97.1
Msa0343190 AT1G17640.1 37.415 147 87 2 102 243 98 244 9.66e-22 97.1
Msa0343190 AT1G17640.3 37.415 147 87 2 102 243 98 244 9.66e-22 97.1
Msa0343190 AT4G14300.1 34.899 149 80 2 104 235 40 188 5.29e-21 95.5
Msa0343190 AT4G14300.1 26.609 233 120 3 159 390 7 189 6.85e-17 83.2
Msa0343190 AT4G14300.2 34.899 149 80 2 104 235 40 188 5.29e-21 95.5
Msa0343190 AT4G14300.2 26.609 233 120 3 159 390 7 189 6.85e-17 83.2
Msa0343190 AT2G33410.1 34.641 153 83 2 100 235 36 188 2.74e-20 93.2
Msa0343190 AT2G33410.1 24.893 233 124 5 159 390 7 189 6.28e-14 73.9
Msa0343190 AT5G47620.1 34.014 147 84 2 102 235 38 184 3.25e-19 90.1
Msa0343190 AT5G47620.1 25.498 251 130 6 159 408 7 201 4.53e-15 77.8
Msa0343190 AT5G47620.1 39.474 114 64 1 311 424 5 113 4.82e-12 68.2
Msa0343190 AT5G47620.2 34.014 147 84 2 102 235 38 184 3.25e-19 90.1
Msa0343190 AT5G47620.2 25.498 251 130 6 159 408 7 201 4.53e-15 77.8
Msa0343190 AT5G47620.2 39.474 114 64 1 311 424 5 113 4.82e-12 68.2
Msa0343190 AT5G47620.5 34.014 147 84 2 102 235 38 184 3.25e-19 90.1
Msa0343190 AT5G47620.5 25.498 251 130 6 159 408 7 201 4.53e-15 77.8
Msa0343190 AT5G47620.5 39.474 114 64 1 311 424 5 113 4.82e-12 68.2
Msa0343190 AT3G13224.3 33.813 139 88 2 104 238 44 182 6.33e-19 88.6
Msa0343190 AT3G13224.3 36.709 79 50 0 159 237 11 89 6.60e-11 64.3
Msa0343190 AT3G13224.2 33.813 139 88 2 104 238 53 191 7.31e-19 88.6
Msa0343190 AT3G13224.2 36.709 79 50 0 159 237 20 98 7.72e-11 63.9
Msa0343190 AT3G13224.1 30.435 161 102 3 102 260 51 203 2.54e-18 84.3
Msa0343190 AT3G13224.1 36.709 79 50 0 159 237 20 98 3.57e-11 63.5
Msa0343190 AT5G40490.1 30.882 136 92 1 102 235 74 209 3.03e-18 87.4
Msa0343190 AT5G40490.2 30.882 136 92 1 102 235 57 192 5.44e-18 86.3
Msa0343190 AT5G55550.10 27.309 249 141 7 159 388 7 234 1.84e-16 82.4
Msa0343190 AT5G55550.10 27.917 240 153 7 5 235 7 235 4.01e-16 81.3
Msa0343190 AT5G55550.8 27.309 249 141 7 159 388 7 234 2.00e-16 82.0
Msa0343190 AT5G55550.8 27.917 240 153 7 5 235 7 235 3.60e-16 81.3
Msa0343190 AT5G47620.4 26.295 251 150 6 159 408 7 223 2.29e-16 81.6
Msa0343190 AT5G47620.4 30.178 169 83 3 102 235 38 206 1.42e-15 79.3
Msa0343190 AT1G58470.2 31.098 164 86 2 104 240 40 203 1.93e-15 78.2
Msa0343190 AT1G58470.1 31.098 164 86 2 104 240 40 203 1.93e-15 78.2
Msa0343190 AT5G47620.3 36.449 107 65 2 303 408 37 141 6.76e-11 64.3

Find 150 sgRNAs with CRISPR-Local

Find 365 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CCGTGCTTACTTCCATAAAT+TGG 0.136403 3_1:-1210814 None:intergenic
GACCATCCCGGCCCAATTTA+TGG 0.168688 3_1:+1210802 Msa0343190:CDS
TTGAGCGAGATCTTCAATTT+AGG 0.182891 3_1:+1207858 Msa0343190:five_prime_UTR
GAGGATCTCCGTCAATATTT+TGG 0.192414 3_1:+1210975 Msa0343190:CDS
AGAACAGGTCACAGGGGTTT+TGG 0.241128 3_1:+1211114 Msa0343190:CDS
AGATCCTCAGAATTTGCTTC+TGG 0.252248 3_1:-1210960 None:intergenic
ACTGGACGATCTCGTGGTTT+TGG 0.264082 3_1:+1209388 Msa0343190:CDS
AACAATAGTATGGAATCTTT+TGG 0.272282 3_1:+1211793 Msa0343190:CDS
CCTGCAGTGACGCAATTATT+TGG 0.284275 3_1:+1208735 Msa0343190:CDS
TGAATGATACCAGCGCGATT+TGG 0.288688 3_1:-1208791 None:intergenic
TCTTGATACTCTGCTCTTGA+TGG 0.300596 3_1:-1212136 None:intergenic
TACCTCCAATCTGCTCTTGA+TGG 0.311138 3_1:-1212244 None:intergenic
CAGATTATCAGGAGCATATT+GGG 0.312453 3_1:+1212218 Msa0343190:CDS
GCCATCGAGAGCAGATTATC+AGG 0.327728 3_1:+1212171 Msa0343190:CDS
GAATGATACCAGCGCGATTT+GGG 0.327934 3_1:-1208790 None:intergenic
GGTGGTCCGGTGCGAAGTTA+TGG 0.334546 3_1:+1211823 Msa0343190:CDS
CTTGTTAATTTCCCCTTCAT+AGG 0.336035 3_1:+1208141 Msa0343190:five_prime_UTR
AAAGAATATATGAGCAAATA+TGG 0.338240 3_1:+1208371 Msa0343190:CDS
GCCATCAAGAGCAGATTATC+AGG 0.340447 3_1:+1212207 Msa0343190:CDS
TGAGCGAGATCTTCAATTTA+GGG 0.352184 3_1:+1207859 Msa0343190:five_prime_UTR
TCAAAGATGCATCGTGGAAT+TGG 0.356848 3_1:+1210097 Msa0343190:CDS
GCAGATTATCAGGAGCATAT+TGG 0.357853 3_1:+1212217 Msa0343190:CDS
CCCCTGTGACCTGTTCTCTT+AGG 0.360493 3_1:-1211108 None:intergenic
TCCTGATAATCTGCTCTTGA+TGG 0.360661 3_1:-1212208 None:intergenic
CGTGCTTACTTCCATAAATT+GGG 0.361827 3_1:-1210813 None:intergenic
CAGAGTATCAAGAGCAGCTT+GGG 0.374034 3_1:+1212146 Msa0343190:CDS
CAGCAGAACCTCCGAGTTCA+TGG 0.380347 3_1:-1210427 None:intergenic
CAGATTATCAGGAGCAGATT+GGG 0.384978 3_1:+1212182 Msa0343190:CDS
AAAGACAGAAACAAAGAAAC+AGG 0.386633 3_1:+1207783 Msa0343190:five_prime_UTR
CTATCGCTCCGCACCGTCTC+AGG 0.387812 3_1:-1207811 None:intergenic
CCCTGTGACATTCTGCCAGT+TGG 0.392171 3_1:-1210703 None:intergenic
GCGATAGAGGGAGGAGGAAG+AGG 0.408941 3_1:+1207827 Msa0343190:five_prime_UTR
TTGATTCAGGAGCGTTCAAC+TGG 0.410138 3_1:+1209370 Msa0343190:intron
TAGACAGTGTCATACTAGTA+TGG 0.412812 3_1:-1212271 None:intergenic
GTGTGAGAACGAGGTGGAAT+TGG 0.413378 3_1:+1208101 Msa0343190:five_prime_UTR
GTGGTCCGGTGCGAAGTTAT+GGG 0.426221 3_1:+1211824 Msa0343190:CDS
CGATAGAGGGAGGAGGAAGA+GGG 0.431789 3_1:+1207828 Msa0343190:five_prime_UTR
GATCCTCAGAATTTGCTTCT+GGG 0.437213 3_1:-1210959 None:intergenic
TTGTTAATTTCCCCTTCATA+GGG 0.438155 3_1:+1208142 Msa0343190:five_prime_UTR
CTAAGGCCTCATGAGATTTG+TGG 0.448058 3_1:+1211180 Msa0343190:CDS
GAGACGGTGCGGAGCGATAG+AGG 0.448606 3_1:+1207814 Msa0343190:five_prime_UTR
TGCTTTGTTCAAGTTGCAAA+TGG 0.455192 3_1:+1208175 Msa0343190:exon
TAGCAGATCGTGTCTCTCTA+AGG 0.457080 3_1:+1211163 Msa0343190:CDS
CTGGGCCTAGCATCGTCAAC+AGG 0.457459 3_1:-1211754 None:intergenic
GTTTCTTCTGTTACTGATGG+TGG 0.458285 3_1:-1209760 None:intergenic
TGTTACTGATGGTGGAATCC+TGG 0.459291 3_1:-1209752 None:intergenic
ATTTATTTCTAACAGGATCA+AGG 0.466443 3_1:+1210073 Msa0343190:intron
TGAGCTACAGGTCGCGCACT+TGG 0.467841 3_1:+1208822 Msa0343190:CDS
GCAGATTATCAGGAGCAGAT+TGG 0.471023 3_1:+1212181 Msa0343190:CDS
GCCAACTGGCAGAATGTCAC+AGG 0.472918 3_1:+1210702 Msa0343190:CDS
TTGTCAGGTGAACATGTTCT+TGG 0.474282 3_1:+1209535 Msa0343190:CDS
GTGTAGGATCCTAAGAGAAC+AGG 0.475893 3_1:+1211099 Msa0343190:intron
TTTATCACTTTCGCAAATGC+AGG 0.475953 3_1:+1210121 Msa0343190:CDS
GAAGCTATACAAACTTGCCT+TGG 0.476198 3_1:-1210471 None:intergenic
TACAGGTCGCGCACTTGGGA+AGG 0.479917 3_1:+1208827 Msa0343190:CDS
GAAGATGACGTTAAGCCAAC+TGG 0.484275 3_1:+1210688 Msa0343190:CDS
TGCTCTTGATGGCCTCACAC+TGG 0.484555 3_1:-1212125 None:intergenic
GTTCATCATAAAATTTCCGC+TGG 0.484629 3_1:-1211773 None:intergenic
AGAAGATTGCATTGTCATGA+AGG 0.486289 3_1:+1208400 Msa0343190:CDS
GCTCTTGATGGCCTCACACT+GGG 0.488596 3_1:-1212124 None:intergenic
GAGAGAGTGGTGTGAGAACG+AGG 0.489579 3_1:+1208092 Msa0343190:five_prime_UTR
AAAGTTTCTTCTGTTACTGA+TGG 0.496580 3_1:-1209763 None:intergenic
TTCACAGCCTTGTGAGCTAC+AGG 0.500022 3_1:+1208810 Msa0343190:CDS
AAGCTATACAAACTTGCCTT+GGG 0.503521 3_1:-1210470 None:intergenic
CTTACTTCCATAAATTGGGC+CGG 0.506196 3_1:-1210809 None:intergenic
CCAAATAATTGCGTCACTGC+AGG 0.507854 3_1:-1208735 None:intergenic
GGGAAATCCGAAAGAAAAGA+AGG 0.508586 3_1:+1208848 Msa0343190:CDS
CAAGAGCAGATTGGAGGTAC+AGG 0.513063 3_1:+1212248 Msa0343190:CDS
TTCCATAAATTGGGCCGGGA+TGG 0.514701 3_1:-1210804 None:intergenic
CGAAGTTATGGGAGGATGTA+CGG 0.515719 3_1:+1211835 Msa0343190:CDS
TCCTCAGAATTTGCTTCTGG+GGG 0.515936 3_1:-1210957 None:intergenic
TGGCTGCAGGAAGTATTGTC+AGG 0.517437 3_1:+1209520 Msa0343190:intron
GCAGAGTATCAAGAGCAGCT+TGG 0.522183 3_1:+1212145 Msa0343190:CDS
ATATGTTACATTTGCTTCAG+TGG 0.522316 3_1:+1209411 Msa0343190:CDS
ATCCTAAGAGAACAGGTCAC+AGG 0.523936 3_1:+1211106 Msa0343190:CDS
AATTGGTACAGTCATGGTGC+GGG 0.526292 3_1:+1208705 Msa0343190:intron
ATCCTCAGAATTTGCTTCTG+GGG 0.527061 3_1:-1210958 None:intergenic
TTACTTCCATAAATTGGGCC+GGG 0.527888 3_1:-1210808 None:intergenic
CATATATTCTTTCAACCCCT+CGG 0.529055 3_1:-1208360 None:intergenic
CGTTCAACTGGACGATCTCG+TGG 0.530966 3_1:+1209382 Msa0343190:CDS
GTCGGAAGGAAGGCAACCAC+AGG 0.531625 3_1:-1208875 None:intergenic
GGAGGCCATCAAGAGCAGAT+TGG 0.532787 3_1:+1212239 Msa0343190:CDS
GTCAGAAAACACAGGTAGAT+CGG 0.544124 3_1:-1208903 None:intergenic
TCCTAAGAGAACAGGTCACA+GGG 0.544537 3_1:+1211107 Msa0343190:CDS
TCCTGATAATCTGCTCTCGA+TGG 0.544958 3_1:-1212172 None:intergenic
CAAATCTTCCAAAATATTGA+CGG 0.547778 3_1:-1210983 None:intergenic
ATCGGTCCTTGTCGGAAGGA+AGG 0.551398 3_1:-1208885 None:intergenic
GTGAACATGTTCTTGGTGAT+AGG 0.551959 3_1:+1209542 Msa0343190:CDS
CCACACCTGTTGACGATGCT+AGG 0.555874 3_1:+1211749 Msa0343190:CDS
TAATTTGCGAAATTCGAGAA+TGG 0.555966 3_1:+1210510 Msa0343190:CDS
AGCAGAACCTCCGAGTTCAT+GGG 0.558652 3_1:-1210426 None:intergenic
CCTTGGGACGTTGATACCGA+GGG 0.562559 3_1:+1208344 Msa0343190:CDS
TCCTTGGGACGTTGATACCG+AGG 0.565062 3_1:+1208343 Msa0343190:CDS
GAGCTACAGGTCGCGCACTT+GGG 0.570253 3_1:+1208823 Msa0343190:CDS
AGTATCAAGAGCAGCTTGGG+AGG 0.570420 3_1:+1212149 Msa0343190:CDS
TGCTTCAGTGGATGACGCCA+AGG 0.572403 3_1:+1209423 Msa0343190:CDS
CCGGGATGGTCATACAAAGT+AGG 0.572756 3_1:-1210790 None:intergenic
ACAGGTCGCGCACTTGGGAA+GGG 0.573440 3_1:+1208828 Msa0343190:CDS
CCTAGCATCGTCAACAGGTG+TGG 0.574276 3_1:-1211749 None:intergenic
GTTCTCTGTTGCAGAGTCTG+TGG 0.578730 3_1:+1210385 Msa0343190:intron
ATGTCAGAAACCCATGAACT+CGG 0.579138 3_1:+1210416 Msa0343190:CDS
TGCGGAGCGATAGAGGGAGG+AGG 0.579799 3_1:+1207821 Msa0343190:five_prime_UTR
GGCCATCAAGAGCAGATTGG+AGG 0.581090 3_1:+1212242 Msa0343190:CDS
GTCGTTGCCCCAAATCGCGC+TGG 0.582046 3_1:+1208782 Msa0343190:CDS
GCAACTAGATATGCAGCTCT+CGG 0.584684 3_1:+1210763 Msa0343190:CDS
CGGTGCGGAGCGATAGAGGG+AGG 0.587688 3_1:+1207818 Msa0343190:five_prime_UTR
ACAGGTAGATCGGTCCTTGT+CGG 0.591777 3_1:-1208893 None:intergenic
TGTTCTTGGTGATAGGATGC+TGG 0.592674 3_1:+1209549 Msa0343190:CDS
GTTACGGAGTTCCCAGTGTG+AGG 0.595404 3_1:+1212113 Msa0343190:CDS
ACTCGGAGGTTCTGCTGTGG+TGG 0.596322 3_1:+1210433 Msa0343190:CDS
TGGTTGCCTTCCTTCCGACA+AGG 0.597207 3_1:+1208879 Msa0343190:CDS
TGCGCGACCTGTAGCTCACA+AGG 0.598857 3_1:-1208817 None:intergenic
CCCTCGGTATCAACGTCCCA+AGG 0.604646 3_1:-1208344 None:intergenic
TTCATCATAAAATTTCCGCT+GGG 0.604967 3_1:-1211772 None:intergenic
AGACGGTGCGGAGCGATAGA+GGG 0.607784 3_1:+1207815 Msa0343190:five_prime_UTR
ATCCTCCCATAACTTCGCAC+CGG 0.611262 3_1:-1211829 None:intergenic
GTAGATCGGTCCTTGTCGGA+AGG 0.615107 3_1:-1208889 None:intergenic
GACAGAAACAAAGAAACAGG+AGG 0.621319 3_1:+1207786 Msa0343190:five_prime_UTR
GAAACAGGAGGAACCTGAGA+CGG 0.624547 3_1:+1207798 Msa0343190:five_prime_UTR
CCAACTGGCAGAATGTCACA+GGG 0.624939 3_1:+1210703 Msa0343190:CDS
AACAGATTTGTACATGCCAA+AGG 0.628424 3_1:+1209960 Msa0343190:CDS
AACTGGCAGAATGTCACAGG+GGG 0.633257 3_1:+1210705 Msa0343190:CDS
CAATTGGTACAGTCATGGTG+CGG 0.638311 3_1:+1208704 Msa0343190:intron
TAGGATGCTGGAAGTCAAAG+TGG 0.638327 3_1:+1209561 Msa0343190:CDS
TCGTGTCCACAAATCTCATG+AGG 0.638940 3_1:-1211186 None:intergenic
AGTCAAAGTGGCTACACCGA+AGG 0.639479 3_1:+1209573 Msa0343190:CDS
ATTATCAGGAGCAGATTGGG+AGG 0.645499 3_1:+1212185 Msa0343190:CDS
AATGATACCAGCGCGATTTG+GGG 0.662366 3_1:-1208789 None:intergenic
AGAGTGGTGTGAGAACGAGG+TGG 0.663600 3_1:+1208095 Msa0343190:five_prime_UTR
GTCCGGTGCGAAGTTATGGG+AGG 0.664724 3_1:+1211827 Msa0343190:CDS
AATGGAGCAGAGAAAGCTTG+TGG 0.669020 3_1:+1208193 Msa0343190:exon
TGAACTCGGAGGTTCTGCTG+TGG 0.671631 3_1:+1210430 Msa0343190:CDS
AGGAGGAACCTGAGACGGTG+CGG 0.673461 3_1:+1207803 Msa0343190:five_prime_UTR
CCTACTTTGTATGACCATCC+CGG 0.674918 3_1:+1210790 Msa0343190:CDS
TCATGAGATTTGTGGACACG+AGG 0.678619 3_1:+1211188 Msa0343190:CDS
ATTGGTACAGTCATGGTGCG+GGG 0.678912 3_1:+1208706 Msa0343190:intron
CCTCAGAATTTGCTTCTGGG+GGG 0.679553 3_1:-1210956 None:intergenic
GGTTGATCGAGCTACACCCA+AGG 0.679610 3_1:+1210454 Msa0343190:CDS
GGTACAGTCATGGTGCGGGG+TGG 0.681666 3_1:+1208709 Msa0343190:intron
CTTGGGACGTTGATACCGAG+GGG 0.682216 3_1:+1208345 Msa0343190:CDS
GTTGACGATGCTAGGCCCAG+CGG 0.703212 3_1:+1211757 Msa0343190:CDS
AAGAAAAGAAGGAAAACCTG+TGG 0.705250 3_1:+1208859 Msa0343190:CDS
GAATGTAAACATCTTCTATG+CGG 0.707080 3_1:-1211007 None:intergenic
CAAGGCTCAAAGATGCATCG+TGG 0.707955 3_1:+1210091 Msa0343190:CDS
ACTGGCAGAATGTCACAGGG+GGG 0.713375 3_1:+1210706 Msa0343190:CDS
ATTATCAGGAGCATATTGGG+AGG 0.722298 3_1:+1212221 Msa0343190:CDS
CCTAAGAGAACAGGTCACAG+GGG 0.726380 3_1:+1211108 Msa0343190:CDS
TCAGAAACCCATGAACTCGG+AGG 0.747096 3_1:+1210419 Msa0343190:CDS
CAACTGGCAGAATGTCACAG+GGG 0.762401 3_1:+1210704 Msa0343190:CDS
AGTTATGGGAGGATGTACGG+TGG 0.763025 3_1:+1211838 Msa0343190:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! ATAAAAAAAAACACAAAATT+GGG - chr3_1:1208439-1208458 None:intergenic 10.0%
!! AATAAAAAAAAACACAAAAT+TGG - chr3_1:1208440-1208459 None:intergenic 10.0%
!!! TATTTTTCTGTATTATAATT+TGG + chr3_1:1210648-1210667 Msa0343190:intron 10.0%
!! CTTAAAAAATTCAAATATTT+AGG + chr3_1:1211251-1211270 Msa0343190:intron 10.0%
!!! TAAAATGTTTTTGTTTTTAA+TGG - chr3_1:1211539-1211558 None:intergenic 10.0%
!! TTTGTTTATGTTTATTCATT+TGG + chr3_1:1208234-1208253 Msa0343190:intron 15.0%
!! TTGTTTATGTTTATTCATTT+GGG + chr3_1:1208235-1208254 Msa0343190:intron 15.0%
!! AATTTCAAATAAATATGCAT+GGG - chr3_1:1209197-1209216 None:intergenic 15.0%
!! AAATTTCAAATAAATATGCA+TGG - chr3_1:1209198-1209217 None:intergenic 15.0%
!! GAAAAGGAAAAAAAAAAAAA+AGG - chr3_1:1209904-1209923 None:intergenic 15.0%
!!! ATTTTTCATTTATTTCTAAC+AGG + chr3_1:1210066-1210085 Msa0343190:intron 15.0%
!!! GTCTACATATTTTAAATATA+TGG + chr3_1:1210195-1210214 Msa0343190:intron 15.0%
!! ATAAAATAAAATTATACCAG+CGG + chr3_1:1210564-1210583 Msa0343190:intron 15.0%
!!! ATTAGTAAAAAGATTTTTGT+TGG + chr3_1:1210927-1210946 Msa0343190:CDS 15.0%
!! TGTTTATGAAATTGGATATT+AGG + chr3_1:1208310-1208329 Msa0343190:intron 20.0%
!! AAAGAATATATGAGCAAATA+TGG + chr3_1:1208371-1208390 Msa0343190:CDS 20.0%
!!! CACATTTGTTATTATTAACA+AGG - chr3_1:1208496-1208515 None:intergenic 20.0%
!! TTAAGTTAGTAATTGAATGA+CGG - chr3_1:1208544-1208563 None:intergenic 20.0%
!! AAATGTAAATGTCATATACA+AGG + chr3_1:1209304-1209323 Msa0343190:intron 20.0%
!!! TAATCTACTTATTTTGATTC+AGG + chr3_1:1209357-1209376 Msa0343190:intron 20.0%
!!! ACAAATATTTTTGTAACCTT+CGG - chr3_1:1209592-1209611 None:intergenic 20.0%
!!! AAAAATTCTGGTAACTTTTT+TGG - chr3_1:1209728-1209747 None:intergenic 20.0%
!! TAAATATATGGTAGTTTCAT+AGG + chr3_1:1210207-1210226 Msa0343190:intron 20.0%
!! AAATTAAACCAAAACTAGAA+TGG - chr3_1:1210301-1210320 None:intergenic 20.0%
!!! TCTAGTTTTGGTTTAATTTT+TGG + chr3_1:1210302-1210321 Msa0343190:intron 20.0%
!! TAAAATAAAATTATACCAGC+GGG + chr3_1:1210565-1210584 Msa0343190:intron 20.0%
!!! TTTTATTCATATCTTACTCT+GGG - chr3_1:1211032-1211051 None:intergenic 20.0%
!!! TTTTTATTCATATCTTACTC+TGG - chr3_1:1211033-1211052 None:intergenic 20.0%
!!! TTTTATGATGAACAATAGTA+TGG + chr3_1:1211783-1211802 Msa0343190:CDS 20.0%
!! TTTGAATTTCGTTTTCATCA+AGG + chr3_1:1207883-1207902 Msa0343190:five_prime_UTR 25.0%
! GCGAAAAAATTGAAAGAATT+TGG - chr3_1:1207929-1207948 None:intergenic 25.0%
!!! AAATCAAAATTCTGCTTTTG+GGG - chr3_1:1207984-1208003 None:intergenic 25.0%
!!! CAAATCAAAATTCTGCTTTT+GGG - chr3_1:1207985-1208004 None:intergenic 25.0%
! ACAATAAAAATCCCTATGAA+GGG - chr3_1:1208156-1208175 None:intergenic 25.0%
! TTGATCTGTGTTTATGAAAT+TGG + chr3_1:1208302-1208321 Msa0343190:intron 25.0%
!! TGAAATTGGATATTAGGTTT+TGG + chr3_1:1208316-1208335 Msa0343190:intron 25.0%
!! GAAATTGGATATTAGGTTTT+GGG + chr3_1:1208317-1208336 Msa0343190:intron 25.0%
!! AAATTGGATATTAGGTTTTG+GGG + chr3_1:1208318-1208337 Msa0343190:intron 25.0%
!!! TCCAGCTTGTTTATTTTAAA+AGG + chr3_1:1208956-1208975 Msa0343190:intron 25.0%
!!! CCAGCTTGTTTATTTTAAAA+GGG + chr3_1:1208957-1208976 Msa0343190:intron 25.0%
!!! TTTATTTTAAAAGGGCAACA+TGG + chr3_1:1208965-1208984 Msa0343190:intron 25.0%
!!! ATGCATTTTGTTTTAGGTTA+AGG + chr3_1:1208991-1209010 Msa0343190:intron 25.0%
! TAGATAGAACTATTATGTCA+AGG + chr3_1:1209140-1209159 Msa0343190:intron 25.0%
! AAATAAATATGCATGGGAAA+TGG - chr3_1:1209191-1209210 None:intergenic 25.0%
!!! CAAATTTGTTTTATCACTTC+CGG + chr3_1:1209271-1209290 Msa0343190:intron 25.0%
! TTTACATTTCATATTCAGTC+CGG - chr3_1:1209293-1209312 None:intergenic 25.0%
! AGTATTACAATTATAGCACA+TGG - chr3_1:1209660-1209679 None:intergenic 25.0%
!! CTTGTGATGTTACATTTTAA+AGG + chr3_1:1209684-1209703 Msa0343190:intron 25.0%
!! AAAAGTTACCAGAATTTTTG+TGG + chr3_1:1209729-1209748 Msa0343190:CDS 25.0%
!! TAACAGAAGAAACTTTTAGA+AGG + chr3_1:1209770-1209789 Msa0343190:CDS 25.0%
!! TTTAGAAGGTATATAAGTGT+TGG + chr3_1:1209784-1209803 Msa0343190:intron 25.0%
! ATGACTGCAATAAAAAGAAA+AGG - chr3_1:1209920-1209939 None:intergenic 25.0%
!!! ATTTATTTCTAACAGGATCA+AGG + chr3_1:1210073-1210092 Msa0343190:intron 25.0%
!! TTGTATAGCTTCTCATTTTA+TGG + chr3_1:1210482-1210501 Msa0343190:CDS 25.0%
! AAAATAAAATTATACCAGCG+GGG + chr3_1:1210566-1210585 Msa0343190:intron 25.0%
! ACAAATATCCTTCAATAGTT+AGG - chr3_1:1210622-1210641 None:intergenic 25.0%
!!! TAGTCATTTTAATTGAACAG+AGG - chr3_1:1210849-1210868 None:intergenic 25.0%
! CAAATCTTCCAAAATATTGA+CGG - chr3_1:1210986-1211005 None:intergenic 25.0%
!!! CAAATATTTAGGTGTTTTGA+TGG + chr3_1:1211262-1211281 Msa0343190:intron 25.0%
! AATAACAACACACTTAAATC+AGG - chr3_1:1211352-1211371 None:intergenic 25.0%
!! TGATTTAAGTGTGTTGTTAT+TGG + chr3_1:1211351-1211370 Msa0343190:intron 25.0%
!! AACAATAGTATGGAATCTTT+TGG + chr3_1:1211793-1211812 Msa0343190:CDS 25.0%
!! ACAATAGTATGGAATCTTTT+GGG + chr3_1:1211794-1211813 Msa0343190:CDS 25.0%
!! GGGATAATTTGTCAAAAATT+TGG + chr3_1:1211891-1211910 Msa0343190:intron 25.0%
! AGAACCAAGAAACTATTAAA+TGG - chr3_1:1211943-1211962 None:intergenic 25.0%
!!! ATCAATGTTTTTATGACTGA+TGG - chr3_1:1212012-1212031 None:intergenic 25.0%
!! AAAAACATTGATAATCTGCA+TGG + chr3_1:1212020-1212039 Msa0343190:intron 25.0%
! AAAACAGTGTGTAAACAAAA+AGG - chr3_1:1212080-1212099 None:intergenic 25.0%
AAAGACAGAAACAAAGAAAC+AGG + chr3_1:1207783-1207802 Msa0343190:five_prime_UTR 30.0%
! CCAAATCAAAATTCTGCTTT+TGG - chr3_1:1207986-1208005 None:intergenic 30.0%
!!! CCAAAAGCAGAATTTTGATT+TGG + chr3_1:1207983-1208002 Msa0343190:intron 30.0%
TTGTTAATTTCCCCTTCATA+GGG + chr3_1:1208142-1208161 Msa0343190:five_prime_UTR 30.0%
CAATAAAAATCCCTATGAAG+GGG - chr3_1:1208155-1208174 None:intergenic 30.0%
CACAATAAAAATCCCTATGA+AGG - chr3_1:1208157-1208176 None:intergenic 30.0%
GAGTAATATTCGAATCTGTT+TGG + chr3_1:1208619-1208638 Msa0343190:intron 30.0%
! GAGACAGTAATAATCCATTT+TGG + chr3_1:1208641-1208660 Msa0343190:intron 30.0%
CATGATTAATAGCATAGCTT+TGG - chr3_1:1208671-1208690 None:intergenic 30.0%
! AGGTTTTCCTTCTTTTCTTT+CGG - chr3_1:1208858-1208877 None:intergenic 30.0%
!!! CCCTTTTAAAATAAACAAGC+TGG - chr3_1:1208960-1208979 None:intergenic 30.0%
AACCCAAAACAATTATCACT+CGG - chr3_1:1209022-1209041 None:intergenic 30.0%
!!! GTGATAATTGTTTTGGGTTA+TGG + chr3_1:1209023-1209042 Msa0343190:intron 30.0%
AAGTTAGATTTCCCTATACT+AGG + chr3_1:1209329-1209348 Msa0343190:intron 30.0%
AGATTAGAATGCCTAGTATA+GGG - chr3_1:1209343-1209362 None:intergenic 30.0%
TAGATTAGAATGCCTAGTAT+AGG - chr3_1:1209344-1209363 None:intergenic 30.0%
ATATGTTACATTTGCTTCAG+TGG + chr3_1:1209411-1209430 Msa0343190:CDS 30.0%
!! GTGATGTTACATTTTAAAGG+AGG + chr3_1:1209687-1209706 Msa0343190:intron 30.0%
AAAGTTTCTTCTGTTACTGA+TGG - chr3_1:1209766-1209785 None:intergenic 30.0%
!! TGCAGTCATTTTGAGAAATA+TGG + chr3_1:1209931-1209950 Msa0343190:intron 30.0%
CATACATAAGCAACAGTAAA+TGG - chr3_1:1210152-1210171 None:intergenic 30.0%
ACATATCATCAATTGCTCTA+AGG + chr3_1:1210357-1210376 Msa0343190:intron 30.0%
! TAATTTGCGAAATTCGAGAA+TGG + chr3_1:1210510-1210529 Msa0343190:CDS 30.0%
GAAAATGTCTTCATTACACA+TGG - chr3_1:1210540-1210559 None:intergenic 30.0%
! GTCTAAACAATGAAAGCATA+TGG - chr3_1:1210600-1210619 None:intergenic 30.0%
TGTTTAGACCTAACTATTGA+AGG + chr3_1:1210611-1210630 Msa0343190:intron 30.0%
!! TTTGGCTGTACCATTTTTAT+AGG + chr3_1:1210666-1210685 Msa0343190:intron 30.0%
ACGTCATCTTCCTATAAAAA+TGG - chr3_1:1210679-1210698 None:intergenic 30.0%
ACGATCTCACTTTGTAAATT+AGG + chr3_1:1210885-1210904 Msa0343190:intron 30.0%
CGATCTCACTTTGTAAATTA+GGG + chr3_1:1210886-1210905 Msa0343190:intron 30.0%
GATCTCACTTTGTAAATTAG+GGG + chr3_1:1210887-1210906 Msa0343190:intron 30.0%
ATCTCACTTTGTAAATTAGG+GGG + chr3_1:1210888-1210907 Msa0343190:intron 30.0%
!! CGTCAATATTTTGGAAGATT+TGG + chr3_1:1210984-1211003 Msa0343190:CDS 30.0%
GAATGTAAACATCTTCTATG+CGG - chr3_1:1211010-1211029 None:intergenic 30.0%
!! AGTTAATCAGCTTTAAACAC+TGG - chr3_1:1211064-1211083 None:intergenic 30.0%
!!! TTTGTTACTTTTGCTGATGA+AGG + chr3_1:1211138-1211157 Msa0343190:CDS 30.0%
!!! ATTTAGGTGTTTTGATGGAA+TGG + chr3_1:1211267-1211286 Msa0343190:intron 30.0%
GGAATTTGCCATTAAAAGTT+TGG + chr3_1:1211419-1211438 Msa0343190:intron 30.0%
! CTAGGAATCCAAACTTTTAA+TGG - chr3_1:1211430-1211449 None:intergenic 30.0%
TACTGTTGATGCAATAAACT+AGG - chr3_1:1211448-1211467 None:intergenic 30.0%
TTTATTGCATCAACAGTAGT+TGG + chr3_1:1211450-1211469 Msa0343190:intron 30.0%
!!! ATTAGTTTTCTCCTTTGTCA+GGG - chr3_1:1211492-1211511 None:intergenic 30.0%
TTAATAAACTTGTGCAACCT+TGG + chr3_1:1211610-1211629 Msa0343190:intron 30.0%
TAATAAACTTGTGCAACCTT+GGG + chr3_1:1211611-1211630 Msa0343190:intron 30.0%
TTCATCATAAAATTTCCGCT+GGG - chr3_1:1211775-1211794 None:intergenic 30.0%
! CAATAGTATGGAATCTTTTG+GGG + chr3_1:1211795-1211814 Msa0343190:CDS 30.0%
! AATAGTATGGAATCTTTTGG+GGG + chr3_1:1211796-1211815 Msa0343190:CDS 30.0%
AAATTCCAAAGATATTGAGG+TGG - chr3_1:1211917-1211936 None:intergenic 30.0%
CCTAAATTCCAAAGATATTG+AGG - chr3_1:1211920-1211939 None:intergenic 30.0%
!! CCTCAATATCTTTGGAATTT+AGG + chr3_1:1211917-1211936 Msa0343190:intron 30.0%
TAGGCCATTTAATAGTTTCT+TGG + chr3_1:1211936-1211955 Msa0343190:intron 30.0%
TTGAGCGAGATCTTCAATTT+AGG + chr3_1:1207858-1207877 Msa0343190:five_prime_UTR 35.0%
TGAGCGAGATCTTCAATTTA+GGG + chr3_1:1207859-1207878 Msa0343190:five_prime_UTR 35.0%
!! AAAATTCTGCTTTTGGGGAT+TGG - chr3_1:1207979-1207998 None:intergenic 35.0%
!! TGTGAGAATTTTAGAGAGAG+TGG + chr3_1:1208079-1208098 Msa0343190:five_prime_UTR 35.0%
CTTGTTAATTTCCCCTTCAT+AGG + chr3_1:1208141-1208160 Msa0343190:five_prime_UTR 35.0%
!! TGCTTTGTTCAAGTTGCAAA+TGG + chr3_1:1208175-1208194 Msa0343190:exon 35.0%
CATATATTCTTTCAACCCCT+CGG - chr3_1:1208363-1208382 None:intergenic 35.0%
AGAAGATTGCATTGTCATGA+AGG + chr3_1:1208400-1208419 Msa0343190:CDS 35.0%
AGAACACACCCTTGAATAAT+GGG - chr3_1:1208583-1208602 None:intergenic 35.0%
AAGAACACACCCTTGAATAA+TGG - chr3_1:1208584-1208603 None:intergenic 35.0%
!! ATAGCTTTGGAAGACCAAAA+TGG - chr3_1:1208658-1208677 None:intergenic 35.0%
!!! ATTTGGTGCTTGCATTTTGT+AGG + chr3_1:1208752-1208771 Msa0343190:CDS 35.0%
!!! TTTGGTGCTTGCATTTTGTA+GGG + chr3_1:1208753-1208772 Msa0343190:CDS 35.0%
AAGAAAAGAAGGAAAACCTG+TGG + chr3_1:1208859-1208878 Msa0343190:CDS 35.0%
!! ATTTTAAAAGGGCAACATGG+TGG + chr3_1:1208968-1208987 Msa0343190:intron 35.0%
!!! TGGTGGATGCATTTTGTTTT+AGG + chr3_1:1208985-1209004 Msa0343190:intron 35.0%
! TGCCGAGTGATAATTGTTTT+GGG + chr3_1:1209017-1209036 Msa0343190:intron 35.0%
AGTCAACAAGTATCACTTAG+TGG - chr3_1:1209051-1209070 None:intergenic 35.0%
AAAAGTGACATGCTTAGACT+AGG + chr3_1:1209225-1209244 Msa0343190:intron 35.0%
TATCTAGGTGAAAGTTACCT+TGG - chr3_1:1209443-1209462 None:intergenic 35.0%
TCTACATGTATATCACGAGT+TGG + chr3_1:1209489-1209508 Msa0343190:intron 35.0%
CTGAAACTTGAAATCTAGTC+TGG + chr3_1:1209612-1209631 Msa0343190:intron 35.0%
!! ACATTTTAAAGGAGGAGATG+AGG + chr3_1:1209695-1209714 Msa0343190:intron 35.0%
!! CATTTTAAAGGAGGAGATGA+GGG + chr3_1:1209696-1209715 Msa0343190:intron 35.0%
!!! ATTCTGGTAACTTTTTTGGC+TGG - chr3_1:1209724-1209743 None:intergenic 35.0%
AACAGATTTGTACATGCCAA+AGG + chr3_1:1209960-1209979 Msa0343190:CDS 35.0%
TTTATCACTTTCGCAAATGC+AGG + chr3_1:1210121-1210140 Msa0343190:CDS 35.0%
! CATAGGATCTTGTTATCACT+TGG + chr3_1:1210224-1210243 Msa0343190:intron 35.0%
AAACCAAAACTAGAATGGCA+CGG - chr3_1:1210296-1210315 None:intergenic 35.0%
!!! CTTAGACTTTTGAAGTGAAG+TGG + chr3_1:1210327-1210346 Msa0343190:intron 35.0%
AAGCTATACAAACTTGCCTT+GGG - chr3_1:1210473-1210492 None:intergenic 35.0%
CGTGCTTACTTCCATAAATT+GGG - chr3_1:1210816-1210835 None:intergenic 35.0%
CCAATTTATGGAAGTAAGCA+CGG + chr3_1:1210814-1210833 Msa0343190:intron 35.0%
! TTTTTACTAATTCTCCGACG+AGG - chr3_1:1210918-1210937 None:intergenic 35.0%
GATCCTACACATAAAAAGAC+GGG - chr3_1:1211089-1211108 None:intergenic 35.0%
GGATCCTACACATAAAAAGA+CGG - chr3_1:1211090-1211109 None:intergenic 35.0%
!! GAATGGACATTTTGAAGAAG+GGG - chr3_1:1211330-1211349 None:intergenic 35.0%
!! GGAATGGACATTTTGAAGAA+GGG - chr3_1:1211331-1211350 None:intergenic 35.0%
!! AGGAATGGACATTTTGAAGA+AGG - chr3_1:1211332-1211351 None:intergenic 35.0%
CAACACACTTAAATCAGGAA+TGG - chr3_1:1211347-1211366 None:intergenic 35.0%
!! CTCAGATTTTAGTAACCAGT+TGG + chr3_1:1211380-1211399 Msa0343190:intron 35.0%
!!! GATTAGTTTTCTCCTTTGTC+AGG - chr3_1:1211493-1211512 None:intergenic 35.0%
TGGCAAATGATAGTAGTTAG+TGG - chr3_1:1211519-1211538 None:intergenic 35.0%
TTTACATGCATATGTACCCA+AGG - chr3_1:1211630-1211649 None:intergenic 35.0%
AGTTCAAAGCTTATAGCAAC+AGG - chr3_1:1211655-1211674 None:intergenic 35.0%
TGTGCGTTATTGTTCTAGTA+TGG + chr3_1:1211681-1211700 Msa0343190:intron 35.0%
TCTAGTATGGTTTGATTGAC+TGG + chr3_1:1211694-1211713 Msa0343190:intron 35.0%
GTTCATCATAAAATTTCCGC+TGG - chr3_1:1211776-1211795 None:intergenic 35.0%
! TGATGATGTGAGTATATGCA+AGG + chr3_1:1211870-1211889 Msa0343190:intron 35.0%
GATGATGTGAGTATATGCAA+GGG + chr3_1:1211871-1211890 Msa0343190:intron 35.0%
! ACACTGTTTTCTTTTGCAGT+GGG + chr3_1:1212090-1212109 Msa0343190:intron 35.0%
! CAGATTATCAGGAGCATATT+GGG + chr3_1:1212218-1212237 Msa0343190:CDS 35.0%
GACAGAAACAAAGAAACAGG+AGG + chr3_1:1207786-1207805 Msa0343190:five_prime_UTR 40.0%
!! AAAGTGTGCTTGTTATGTGC+AGG + chr3_1:1208049-1208068 Msa0343190:intron 40.0%
!! AAGTGTGCTTGTTATGTGCA+GGG + chr3_1:1208050-1208069 Msa0343190:intron 40.0%
!!! ATTAGGTTTTGGGGATTCCT+TGG + chr3_1:1208327-1208346 Msa0343190:intron 40.0%
!!! TTAGGTTTTGGGGATTCCTT+GGG + chr3_1:1208328-1208347 Msa0343190:intron 40.0%
CATGTGTGCCCATTATTCAA+GGG + chr3_1:1208572-1208591 Msa0343190:intron 40.0%
ATGCTGCTATTGTGCACAAT+TGG + chr3_1:1208688-1208707 Msa0343190:intron 40.0%
!! TTGGTGCTTGCATTTTGTAG+GGG + chr3_1:1208754-1208773 Msa0343190:CDS 40.0%
GGGAAATCCGAAAGAAAAGA+AGG + chr3_1:1208848-1208867 Msa0343190:CDS 40.0%
GTCAGAAAACACAGGTAGAT+CGG - chr3_1:1208906-1208925 None:intergenic 40.0%
AAATAAACAAGCTGGAGTCC+TGG - chr3_1:1208952-1208971 None:intergenic 40.0%
! CTGCCGAGTGATAATTGTTT+TGG + chr3_1:1209016-1209035 Msa0343190:intron 40.0%
TTGTCAGGTGAACATGTTCT+TGG + chr3_1:1209535-1209554 Msa0343190:CDS 40.0%
! GTGAACATGTTCTTGGTGAT+AGG + chr3_1:1209542-1209561 Msa0343190:CDS 40.0%
! TTACCAGAATTTTTGTGGCC+AGG + chr3_1:1209734-1209753 Msa0343190:CDS 40.0%
AATCCTGGCCACAAAAATTC+TGG - chr3_1:1209740-1209759 None:intergenic 40.0%
GTTTCTTCTGTTACTGATGG+TGG - chr3_1:1209763-1209782 None:intergenic 40.0%
TCAAAGATGCATCGTGGAAT+TGG + chr3_1:1210097-1210116 Msa0343190:CDS 40.0%
! CTTGTTATCACTTGGAGAAG+AGG + chr3_1:1210232-1210251 Msa0343190:intron 40.0%
!!! TATCCGTGCCATTCTAGTTT+TGG + chr3_1:1210290-1210309 Msa0343190:intron 40.0%
ATGTCAGAAACCCATGAACT+CGG + chr3_1:1210416-1210435 Msa0343190:CDS 40.0%
GAAGCTATACAAACTTGCCT+TGG - chr3_1:1210474-1210493 None:intergenic 40.0%
TTACTTCCATAAATTGGGCC+GGG - chr3_1:1210811-1210830 None:intergenic 40.0%
CTTACTTCCATAAATTGGGC+CGG - chr3_1:1210812-1210831 None:intergenic 40.0%
CCGTGCTTACTTCCATAAAT+TGG - chr3_1:1210817-1210836 None:intergenic 40.0%
! ATCCTCAGAATTTGCTTCTG+GGG - chr3_1:1210961-1210980 None:intergenic 40.0%
! GATCCTCAGAATTTGCTTCT+GGG - chr3_1:1210962-1210981 None:intergenic 40.0%
! AGATCCTCAGAATTTGCTTC+TGG - chr3_1:1210963-1210982 None:intergenic 40.0%
! GAGGATCTCCGTCAATATTT+TGG + chr3_1:1210975-1210994 Msa0343190:CDS 40.0%
! TCACCCGTCTTTTTATGTGT+AGG + chr3_1:1211083-1211102 Msa0343190:intron 40.0%
!!! GGACACGAGGTGTTTTATTT+TGG + chr3_1:1211201-1211220 Msa0343190:intron 40.0%
!!! AGGTGTTTTGATGGAATGGA+AGG + chr3_1:1211271-1211290 Msa0343190:intron 40.0%
TGGAATGGAAGGAAATCTGT+AGG + chr3_1:1211282-1211301 Msa0343190:intron 40.0%
GGAATGGAAGGAAATCTGTA+GGG + chr3_1:1211283-1211302 Msa0343190:intron 40.0%
AATGGCAAATTCCCTTCTAG+TGG - chr3_1:1211412-1211431 None:intergenic 40.0%
ATTGCATCAACAGTAGTTGG+AGG + chr3_1:1211453-1211472 Msa0343190:intron 40.0%
!! ATGGAATCTTTTGGGGGATA+TGG + chr3_1:1211802-1211821 Msa0343190:CDS 40.0%
TTTGGCCACCTCAATATCTT+TGG + chr3_1:1211909-1211928 Msa0343190:intron 40.0%
CAGATACTGCAGTTGTACTA+TGG - chr3_1:1211968-1211987 None:intergenic 40.0%
TAAAAATGTGTCCACATGCC+AGG - chr3_1:1212056-1212075 None:intergenic 40.0%
! CACACTGTTTTCTTTTGCAG+TGG + chr3_1:1212089-1212108 Msa0343190:intron 40.0%
! CACTGTTTTCTTTTGCAGTG+GGG + chr3_1:1212091-1212110 Msa0343190:intron 40.0%
! TTTCTTTTGCAGTGGGGTTA+CGG + chr3_1:1212097-1212116 Msa0343190:intron 40.0%
TCTTGATACTCTGCTCTTGA+TGG - chr3_1:1212139-1212158 None:intergenic 40.0%
CAGATTATCAGGAGCAGATT+GGG + chr3_1:1212182-1212201 Msa0343190:CDS 40.0%
TCCTGATAATCTGCTCTTGA+TGG - chr3_1:1212211-1212230 None:intergenic 40.0%
! GCAGATTATCAGGAGCATAT+TGG + chr3_1:1212217-1212236 Msa0343190:CDS 40.0%
! ATTATCAGGAGCATATTGGG+AGG + chr3_1:1212221-1212240 Msa0343190:CDS 40.0%
AATGGAGCAGAGAAAGCTTG+TGG + chr3_1:1208193-1208212 Msa0343190:exon 45.0%
GCATGTGTGCCCATTATTCA+AGG + chr3_1:1208571-1208590 Msa0343190:intron 45.0%
GTGCACAATTGGTACAGTCA+TGG + chr3_1:1208699-1208718 Msa0343190:intron 45.0%
CAATTGGTACAGTCATGGTG+CGG + chr3_1:1208704-1208723 Msa0343190:intron 45.0%
AATTGGTACAGTCATGGTGC+GGG + chr3_1:1208705-1208724 Msa0343190:intron 45.0%
CCAAATAATTGCGTCACTGC+AGG - chr3_1:1208738-1208757 None:intergenic 45.0%
CCTGCAGTGACGCAATTATT+TGG + chr3_1:1208735-1208754 Msa0343190:CDS 45.0%
AATGATACCAGCGCGATTTG+GGG - chr3_1:1208792-1208811 None:intergenic 45.0%
GAATGATACCAGCGCGATTT+GGG - chr3_1:1208793-1208812 None:intergenic 45.0%
TGAATGATACCAGCGCGATT+TGG - chr3_1:1208794-1208813 None:intergenic 45.0%
AACAGCTGGTCAGAAAACAC+AGG - chr3_1:1208914-1208933 None:intergenic 45.0%
!! CTGACCAGCTGTTTGTTTTC+TGG + chr3_1:1208921-1208940 Msa0343190:intron 45.0%
CTCTACCCTCTTCTATCACT+TGG + chr3_1:1209077-1209096 Msa0343190:intron 45.0%
CCAAGCCAAGTGATAGAAGA+GGG - chr3_1:1209085-1209104 None:intergenic 45.0%
!! TTCTATCACTTGGCTTGGCA+TGG + chr3_1:1209087-1209106 Msa0343190:intron 45.0%
!! TCTATCACTTGGCTTGGCAT+GGG + chr3_1:1209088-1209107 Msa0343190:intron 45.0%
!! TTGATTCAGGAGCGTTCAAC+TGG + chr3_1:1209370-1209389 Msa0343190:intron 45.0%
CCAGCAAAATGCGTGTATCT+AGG - chr3_1:1209458-1209477 None:intergenic 45.0%
! CCTAGATACACGCATTTTGC+TGG + chr3_1:1209455-1209474 Msa0343190:intron 45.0%
! TGTTCTTGGTGATAGGATGC+TGG + chr3_1:1209549-1209568 Msa0343190:CDS 45.0%
TAGGATGCTGGAAGTCAAAG+TGG + chr3_1:1209561-1209580 Msa0343190:CDS 45.0%
!! TGTTACTGATGGTGGAATCC+TGG - chr3_1:1209755-1209774 None:intergenic 45.0%
! CAAAGGGAGCAAAGTACCTT+TGG - chr3_1:1209979-1209998 None:intergenic 45.0%
GTCTGCAATGCACAGTCAAA+GGG - chr3_1:1209995-1210014 None:intergenic 45.0%
AGTCTGCAATGCACAGTCAA+AGG - chr3_1:1209996-1210015 None:intergenic 45.0%
CACTTTCGCAAATGCAGGTT+AGG + chr3_1:1210126-1210145 Msa0343190:intron 45.0%
ATATGGAAATGAAACCCCGC+TGG - chr3_1:1210583-1210602 None:intergenic 45.0%
GAAGATGACGTTAAGCCAAC+TGG + chr3_1:1210688-1210707 Msa0343190:CDS 45.0%
GCAACTAGATATGCAGCTCT+CGG + chr3_1:1210763-1210782 Msa0343190:CDS 45.0%
CCTACTTTGTATGACCATCC+CGG + chr3_1:1210790-1210809 Msa0343190:CDS 45.0%
! TCCTCAGAATTTGCTTCTGG+GGG - chr3_1:1210960-1210979 None:intergenic 45.0%
GTGTAGGATCCTAAGAGAAC+AGG + chr3_1:1211099-1211118 Msa0343190:intron 45.0%
ATCCTAAGAGAACAGGTCAC+AGG + chr3_1:1211106-1211125 Msa0343190:CDS 45.0%
TCCTAAGAGAACAGGTCACA+GGG + chr3_1:1211107-1211126 Msa0343190:CDS 45.0%
TAGCAGATCGTGTCTCTCTA+AGG + chr3_1:1211163-1211182 Msa0343190:CDS 45.0%
CTAAGGCCTCATGAGATTTG+TGG + chr3_1:1211180-1211199 Msa0343190:CDS 45.0%
TCGTGTCCACAAATCTCATG+AGG - chr3_1:1211189-1211208 None:intergenic 45.0%
TCATGAGATTTGTGGACACG+AGG + chr3_1:1211188-1211207 Msa0343190:CDS 45.0%
GCAAATTCCCTTCTAGTGGA+AGG - chr3_1:1211408-1211427 None:intergenic 45.0%
CTTTGTCAGGGTTTGAACCT+AGG - chr3_1:1211480-1211499 None:intergenic 45.0%
CTAGGTTCAAACCCTGACAA+AGG + chr3_1:1211478-1211497 Msa0343190:intron 45.0%
!! GAATCTTTTGGGGGATATGG+TGG + chr3_1:1211805-1211824 Msa0343190:CDS 45.0%
CGAAGTTATGGGAGGATGTA+CGG + chr3_1:1211835-1211854 Msa0343190:CDS 45.0%
! CAGAGTATCAAGAGCAGCTT+GGG + chr3_1:1212146-1212165 Msa0343190:CDS 45.0%
TCCTGATAATCTGCTCTCGA+TGG - chr3_1:1212175-1212194 None:intergenic 45.0%
GCAGATTATCAGGAGCAGAT+TGG + chr3_1:1212181-1212200 Msa0343190:CDS 45.0%
ATTATCAGGAGCAGATTGGG+AGG + chr3_1:1212185-1212204 Msa0343190:CDS 45.0%
GCCATCAAGAGCAGATTATC+AGG + chr3_1:1212207-1212226 Msa0343190:CDS 45.0%
TACCTCCAATCTGCTCTTGA+TGG - chr3_1:1212247-1212266 None:intergenic 45.0%
GAAACAGGAGGAACCTGAGA+CGG + chr3_1:1207798-1207817 Msa0343190:five_prime_UTR 50.0%
GTGTGAGAACGAGGTGGAAT+TGG + chr3_1:1208101-1208120 Msa0343190:five_prime_UTR 50.0%
ATTGGTACAGTCATGGTGCG+GGG + chr3_1:1208706-1208725 Msa0343190:intron 50.0%
! TTCACAGCCTTGTGAGCTAC+AGG + chr3_1:1208810-1208829 Msa0343190:CDS 50.0%
ACAGGTAGATCGGTCCTTGT+CGG - chr3_1:1208896-1208915 None:intergenic 50.0%
GTGGCCAGAAAACAAACAGC+TGG - chr3_1:1208928-1208947 None:intergenic 50.0%
!! GTTTGTTTTCTGGCCACTCC+AGG + chr3_1:1208931-1208950 Msa0343190:intron 50.0%
CCCTCTTCTATCACTTGGCT+TGG + chr3_1:1209082-1209101 Msa0343190:intron 50.0%
GCCAAGCCAAGTGATAGAAG+AGG - chr3_1:1209086-1209105 None:intergenic 50.0%
! ACTGGACGATCTCGTGGTTT+TGG + chr3_1:1209388-1209407 Msa0343190:CDS 50.0%
! ATCACGAGTTGGATGTCCTC+TGG + chr3_1:1209500-1209519 Msa0343190:intron 50.0%
ACAATACTTCCTGCAGCCAG+AGG - chr3_1:1209519-1209538 None:intergenic 50.0%
!! TGGCTGCAGGAAGTATTGTC+AGG + chr3_1:1209520-1209539 Msa0343190:intron 50.0%
AGTCAAAGTGGCTACACCGA+AGG + chr3_1:1209573-1209592 Msa0343190:CDS 50.0%
CAAGGCTCAAAGATGCATCG+TGG + chr3_1:1210091-1210110 Msa0343190:CDS 50.0%
GTTCTCTGTTGCAGAGTCTG+TGG + chr3_1:1210385-1210404 Msa0343190:intron 50.0%
TCAGAAACCCATGAACTCGG+AGG + chr3_1:1210419-1210438 Msa0343190:CDS 50.0%
AGCAGAACCTCCGAGTTCAT+GGG - chr3_1:1210429-1210448 None:intergenic 50.0%
CCAACTGGCAGAATGTCACA+GGG + chr3_1:1210703-1210722 Msa0343190:CDS 50.0%
CAACTGGCAGAATGTCACAG+GGG + chr3_1:1210704-1210723 Msa0343190:CDS 50.0%
AACTGGCAGAATGTCACAGG+GGG + chr3_1:1210705-1210724 Msa0343190:CDS 50.0%
CCGGGATGGTCATACAAAGT+AGG - chr3_1:1210793-1210812 None:intergenic 50.0%
TTCCATAAATTGGGCCGGGA+TGG - chr3_1:1210807-1210826 None:intergenic 50.0%
! CCTCAGAATTTGCTTCTGGG+GGG - chr3_1:1210959-1210978 None:intergenic 50.0%
CCTAAGAGAACAGGTCACAG+GGG + chr3_1:1211108-1211127 Msa0343190:CDS 50.0%
! AGAACAGGTCACAGGGGTTT+TGG + chr3_1:1211114-1211133 Msa0343190:CDS 50.0%
!! TTCTAGTGGAAGGTGCCAAC+TGG - chr3_1:1211398-1211417 None:intergenic 50.0%
AGTTGGCACCTTCCACTAGA+AGG + chr3_1:1211397-1211416 Msa0343190:intron 50.0%
GTTGGCACCTTCCACTAGAA+GGG + chr3_1:1211398-1211417 Msa0343190:intron 50.0%
CAACAGTAGTTGGAGGTCCT+AGG + chr3_1:1211460-1211479 Msa0343190:intron 50.0%
CTGAATCTATTGCCACCTGC+AGG - chr3_1:1211729-1211748 None:intergenic 50.0%
!! TTTTGGGGGATATGGTGGTC+CGG + chr3_1:1211810-1211829 Msa0343190:CDS 50.0%
ATCCTCCCATAACTTCGCAC+CGG - chr3_1:1211832-1211851 None:intergenic 50.0%
AGTTATGGGAGGATGTACGG+TGG + chr3_1:1211838-1211857 Msa0343190:CDS 50.0%
CTGCATGGCAATAGTACTCC+TGG + chr3_1:1212035-1212054 Msa0343190:intron 50.0%
GCAATAGTACTCCTGGCATG+TGG + chr3_1:1212042-1212061 Msa0343190:intron 50.0%
! GCAGAGTATCAAGAGCAGCT+TGG + chr3_1:1212145-1212164 Msa0343190:CDS 50.0%
AGTATCAAGAGCAGCTTGGG+AGG + chr3_1:1212149-1212168 Msa0343190:CDS 50.0%
GCCATCGAGAGCAGATTATC+AGG + chr3_1:1212171-1212190 Msa0343190:CDS 50.0%
! CAAGAGCAGATTGGAGGTAC+AGG + chr3_1:1212248-1212267 Msa0343190:CDS 50.0%
CGATAGAGGGAGGAGGAAGA+GGG + chr3_1:1207828-1207847 Msa0343190:five_prime_UTR 55.0%
GAGAGAGTGGTGTGAGAACG+AGG + chr3_1:1208092-1208111 Msa0343190:five_prime_UTR 55.0%
AGAGTGGTGTGAGAACGAGG+TGG + chr3_1:1208095-1208114 Msa0343190:five_prime_UTR 55.0%
TCCTTGGGACGTTGATACCG+AGG + chr3_1:1208343-1208362 Msa0343190:CDS 55.0%
CCTTGGGACGTTGATACCGA+GGG + chr3_1:1208344-1208363 Msa0343190:CDS 55.0%
CTTGGGACGTTGATACCGAG+GGG + chr3_1:1208345-1208364 Msa0343190:CDS 55.0%
TGGTTGCCTTCCTTCCGACA+AGG + chr3_1:1208879-1208898 Msa0343190:CDS 55.0%
ATCGGTCCTTGTCGGAAGGA+AGG - chr3_1:1208888-1208907 None:intergenic 55.0%
GTAGATCGGTCCTTGTCGGA+AGG - chr3_1:1208892-1208911 None:intergenic 55.0%
AACAAGCTGGAGTCCTGGAG+TGG - chr3_1:1208947-1208966 None:intergenic 55.0%
CGTTCAACTGGACGATCTCG+TGG + chr3_1:1209382-1209401 Msa0343190:CDS 55.0%
TGCTTCAGTGGATGACGCCA+AGG + chr3_1:1209423-1209442 Msa0343190:CDS 55.0%
CAGCAGAACCTCCGAGTTCA+TGG - chr3_1:1210430-1210449 None:intergenic 55.0%
TGAACTCGGAGGTTCTGCTG+TGG + chr3_1:1210430-1210449 Msa0343190:CDS 55.0%
GGTTGATCGAGCTACACCCA+AGG + chr3_1:1210454-1210473 Msa0343190:CDS 55.0%
GCCAACTGGCAGAATGTCAC+AGG + chr3_1:1210702-1210721 Msa0343190:CDS 55.0%
CCCTGTGACATTCTGCCAGT+TGG - chr3_1:1210706-1210725 None:intergenic 55.0%
ACTGGCAGAATGTCACAGGG+GGG + chr3_1:1210706-1210725 Msa0343190:CDS 55.0%
ATGTCACAGGGGGGAGGATA+TGG + chr3_1:1210715-1210734 Msa0343190:CDS 55.0%
GACCATCCCGGCCCAATTTA+TGG + chr3_1:1210802-1210821 Msa0343190:CDS 55.0%
AATTAGGGGGAGAGCCTCGT+CGG + chr3_1:1210901-1210920 Msa0343190:intron 55.0%
! CAGAATTTGCTTCTGGGGGG+AGG - chr3_1:1210956-1210975 None:intergenic 55.0%
CCCCCCAGAAGCAAATTCTG+AGG + chr3_1:1210956-1210975 Msa0343190:CDS 55.0%
CCCCTGTGACCTGTTCTCTT+AGG - chr3_1:1211111-1211130 None:intergenic 55.0%
CCTAGCATCGTCAACAGGTG+TGG - chr3_1:1211752-1211771 None:intergenic 55.0%
CCACACCTGTTGACGATGCT+AGG + chr3_1:1211749-1211768 Msa0343190:CDS 55.0%
GTGGTCCGGTGCGAAGTTAT+GGG + chr3_1:1211824-1211843 Msa0343190:CDS 55.0%
GTTACGGAGTTCCCAGTGTG+AGG + chr3_1:1212113-1212132 Msa0343190:CDS 55.0%
! GCTCTTGATGGCCTCACACT+GGG - chr3_1:1212127-1212146 None:intergenic 55.0%
! TGCTCTTGATGGCCTCACAC+TGG - chr3_1:1212128-1212147 None:intergenic 55.0%
GGAGGCCATCAAGAGCAGAT+TGG + chr3_1:1212203-1212222 Msa0343190:CDS 55.0%
GGCCATCAAGAGCAGATTGG+AGG + chr3_1:1212242-1212261 Msa0343190:CDS 55.0%
AGGAGGAACCTGAGACGGTG+CGG + chr3_1:1207803-1207822 Msa0343190:five_prime_UTR 60.0%
AGACGGTGCGGAGCGATAGA+GGG + chr3_1:1207815-1207834 Msa0343190:five_prime_UTR 60.0%
GCGATAGAGGGAGGAGGAAG+AGG + chr3_1:1207827-1207846 Msa0343190:five_prime_UTR 60.0%
CCCTCGGTATCAACGTCCCA+AGG - chr3_1:1208347-1208366 None:intergenic 60.0%
TGCGCGACCTGTAGCTCACA+AGG - chr3_1:1208820-1208839 None:intergenic 60.0%
TGAGCTACAGGTCGCGCACT+TGG + chr3_1:1208822-1208841 Msa0343190:CDS 60.0%
GAGCTACAGGTCGCGCACTT+GGG + chr3_1:1208823-1208842 Msa0343190:CDS 60.0%
TACAGGTCGCGCACTTGGGA+AGG + chr3_1:1208827-1208846 Msa0343190:CDS 60.0%
ACAGGTCGCGCACTTGGGAA+GGG + chr3_1:1208828-1208847 Msa0343190:CDS 60.0%
GTCGGAAGGAAGGCAACCAC+AGG - chr3_1:1208878-1208897 None:intergenic 60.0%
GTTGGATGTCCTCTGGCTGC+AGG + chr3_1:1209507-1209526 Msa0343190:intron 60.0%
ACTCGGAGGTTCTGCTGTGG+TGG + chr3_1:1210433-1210452 Msa0343190:CDS 60.0%
GACTGGCAGCTTGTACCTGC+AGG + chr3_1:1211711-1211730 Msa0343190:intron 60.0%
TGGCAGCTTGTACCTGCAGG+TGG + chr3_1:1211714-1211733 Msa0343190:intron 60.0%
CTGGGCCTAGCATCGTCAAC+AGG - chr3_1:1211757-1211776 None:intergenic 60.0%
GTTGACGATGCTAGGCCCAG+CGG + chr3_1:1211757-1211776 Msa0343190:CDS 60.0%
GGTGGTCCGGTGCGAAGTTA+TGG + chr3_1:1211823-1211842 Msa0343190:CDS 60.0%
GTCCGGTGCGAAGTTATGGG+AGG + chr3_1:1211827-1211846 Msa0343190:CDS 60.0%
CTATCGCTCCGCACCGTCTC+AGG - chr3_1:1207814-1207833 None:intergenic 65.0%
GAGACGGTGCGGAGCGATAG+AGG + chr3_1:1207814-1207833 Msa0343190:five_prime_UTR 65.0%
TGCGGAGCGATAGAGGGAGG+AGG + chr3_1:1207821-1207840 Msa0343190:five_prime_UTR 65.0%
GGTACAGTCATGGTGCGGGG+TGG + chr3_1:1208709-1208728 Msa0343190:intron 65.0%
GTCGTTGCCCCAAATCGCGC+TGG + chr3_1:1208782-1208801 Msa0343190:CDS 65.0%
GGCAGAATGTCACAGGGGGG+AGG + chr3_1:1210709-1210728 Msa0343190:CDS 65.0%
CGGTGCGGAGCGATAGAGGG+AGG + chr3_1:1207818-1207837 Msa0343190:five_prime_UTR 70.0%
Chromosome Type Strat End Strand Name
chr3_1 gene 1207778 1212279 1207778 ID=Msa0343190;Name=Msa0343190
chr3_1 mRNA 1207778 1212279 1207778 ID=Msa0343190-mRNA-1;Parent=Msa0343190;Name=Msa0343190-mRNA-1;_AED=0.11;_eAED=0.11;_QI=250|0.8|0.75|0.93|0.8|0.75|16|0|484
chr3_1 exon 1207778 1207904 1207778 ID=Msa0343190-mRNA-1:exon:412;Parent=Msa0343190-mRNA-1
chr3_1 exon 1208071 1208214 1208071 ID=Msa0343190-mRNA-1:exon:413;Parent=Msa0343190-mRNA-1
chr3_1 exon 1208332 1208421 1208332 ID=Msa0343190-mRNA-1:exon:414;Parent=Msa0343190-mRNA-1
chr3_1 exon 1208716 1208913 1208716 ID=Msa0343190-mRNA-1:exon:415;Parent=Msa0343190-mRNA-1
chr3_1 exon 1209379 1209444 1209379 ID=Msa0343190-mRNA-1:exon:416;Parent=Msa0343190-mRNA-1
chr3_1 exon 1209529 1209594 1209529 ID=Msa0343190-mRNA-1:exon:417;Parent=Msa0343190-mRNA-1
chr3_1 exon 1209706 1209791 1209706 ID=Msa0343190-mRNA-1:exon:418;Parent=Msa0343190-mRNA-1
chr3_1 exon 1209936 1209981 1209936 ID=Msa0343190-mRNA-1:exon:419;Parent=Msa0343190-mRNA-1
chr3_1 exon 1210088 1210142 1210088 ID=Msa0343190-mRNA-1:exon:420;Parent=Msa0343190-mRNA-1
chr3_1 exon 1210399 1210531 1210399 ID=Msa0343190-mRNA-1:exon:421;Parent=Msa0343190-mRNA-1
chr3_1 exon 1210633 1210639 1210633 ID=Msa0343190-mRNA-1:exon:422;Parent=Msa0343190-mRNA-1
chr3_1 exon 1210688 1210826 1210688 ID=Msa0343190-mRNA-1:exon:423;Parent=Msa0343190-mRNA-1
chr3_1 exon 1210907 1211034 1210907 ID=Msa0343190-mRNA-1:exon:424;Parent=Msa0343190-mRNA-1
chr3_1 exon 1211105 1211209 1211105 ID=Msa0343190-mRNA-1:exon:425;Parent=Msa0343190-mRNA-1
chr3_1 exon 1211733 1211876 1211733 ID=Msa0343190-mRNA-1:exon:426;Parent=Msa0343190-mRNA-1
chr3_1 exon 1212109 1212279 1212109 ID=Msa0343190-mRNA-1:exon:427;Parent=Msa0343190-mRNA-1
chr3_1 five_prime_UTR 1207778 1207904 1207778 ID=Msa0343190-mRNA-1:five_prime_utr;Parent=Msa0343190-mRNA-1
chr3_1 five_prime_UTR 1208071 1208193 1208071 ID=Msa0343190-mRNA-1:five_prime_utr;Parent=Msa0343190-mRNA-1
chr3_1 CDS 1208194 1208214 1208194 ID=Msa0343190-mRNA-1:cds;Parent=Msa0343190-mRNA-1
chr3_1 CDS 1208332 1208421 1208332 ID=Msa0343190-mRNA-1:cds;Parent=Msa0343190-mRNA-1
chr3_1 CDS 1208716 1208913 1208716 ID=Msa0343190-mRNA-1:cds;Parent=Msa0343190-mRNA-1
chr3_1 CDS 1209379 1209444 1209379 ID=Msa0343190-mRNA-1:cds;Parent=Msa0343190-mRNA-1
chr3_1 CDS 1209529 1209594 1209529 ID=Msa0343190-mRNA-1:cds;Parent=Msa0343190-mRNA-1
chr3_1 CDS 1209706 1209791 1209706 ID=Msa0343190-mRNA-1:cds;Parent=Msa0343190-mRNA-1
chr3_1 CDS 1209936 1209981 1209936 ID=Msa0343190-mRNA-1:cds;Parent=Msa0343190-mRNA-1
chr3_1 CDS 1210088 1210142 1210088 ID=Msa0343190-mRNA-1:cds;Parent=Msa0343190-mRNA-1
chr3_1 CDS 1210399 1210531 1210399 ID=Msa0343190-mRNA-1:cds;Parent=Msa0343190-mRNA-1
chr3_1 CDS 1210633 1210639 1210633 ID=Msa0343190-mRNA-1:cds;Parent=Msa0343190-mRNA-1
chr3_1 CDS 1210688 1210826 1210688 ID=Msa0343190-mRNA-1:cds;Parent=Msa0343190-mRNA-1
chr3_1 CDS 1210907 1211034 1210907 ID=Msa0343190-mRNA-1:cds;Parent=Msa0343190-mRNA-1
chr3_1 CDS 1211105 1211209 1211105 ID=Msa0343190-mRNA-1:cds;Parent=Msa0343190-mRNA-1
chr3_1 CDS 1211733 1211876 1211733 ID=Msa0343190-mRNA-1:cds;Parent=Msa0343190-mRNA-1
chr3_1 CDS 1212109 1212279 1212109 ID=Msa0343190-mRNA-1:cds;Parent=Msa0343190-mRNA-1
Gene Sequence

>Msa0343190

ATGGAGCAGAGAAAGCTTGTGGTTTTGGGGATTCCTTGGGACGTTGATACCGAGGGGTTGAAAGAATATATGAGCAAATATGGTGAATTAGAAGATTGCATTGTCATGAAGTCATGGTGCGGGGTGGAGTCCTGCAGTGACGCAATTATTTGGTGCTTGCATTTTGTAGGGGCAGCTGTCGTTGCCCCAAATCGCGCTGGTATCATTCACAGCCTTGTGAGCTACAGGTCGCGCACTTGGGAAGGGAAATCCGAAAGAAAAGAAGGAAAACCTGTGGTTGCCTTCCTTCCGACAAGGACCGATCTACCTGAGCGTTCAACTGGACGATCTCGTGGTTTTGGATATGTTACATTTGCTTCAGTGGATGACGCCAAGGAAGTATTGTCAGGTGAACATGTTCTTGGTGATAGGATGCTGGAAGTCAAAGTGGCTACACCGAAGGAGGAGATGAGGGCACCAGCCAAAAAAGTTACCAGAATTTTTGTGGCCAGGATTCCACCATCAGTAACAGAAGAAACTTTTAGAAGTCATTTTGAGAAATATGGTGATATAACAGATTTGTACATGCCAAAGGATCAAGGCTCAAAGATGCATCGTGGAATTGGTTTTATCACTTTCGCAAATGCAGAGTCTGTGGAGAATTTGATGTCAGAAACCCATGAACTCGGAGGTTCTGCTGTGGTGGTTGATCGAGCTACACCCAAGGCAAGTTTGTATAGCTTCTCATTTTATGGAAGAATAATTTGCGAAATTCGAGAATGGATATTTGAAGATGACGTTAAGCCAACTGGCAGAATGTCACAGGGGGGAGGATATGGTGCATACAATGCATATATTTCTACAGCAACTAGATATGCAGCTCTCGGAGCTCCTACTTTGTATGACCATCCCGGCCCAATTTATGGAAGGGGAGAGCCTCGTCGGAGAATTAGTAAAAAGATTTTTGTTGGTCGCCTCCCCCCAGAAGCAAATTCTGAGGATCTCCGTCAATATTTTGGAAGATTTGGCCGCATAGAAGATGTTTACATTCCCAGAGATCCTAAGAGAACAGGTCACAGGGGTTTTGGATTTGTTACTTTTGCTGATGAAGGTGTAGCAGATCGTGTCTCTCTAAGGCCTCATGAGATTTGTGGACACGAGGTGGCAATAGATTCAGCCACACCTGTTGACGATGCTAGGCCCAGCGGAAATTTTATGATGAACAATAGTATGGAATCTTTTGGGGGATATGGTGGTCCGGTGCGAAGTTATGGGAGGATGTACGGTGGTTTAGACTATGATGATTGGGGTTACGGAGTTCCCAGTGTGAGGCCATCAAGAGCAGAGTATCAAGAGCAGCTTGGGAGGCCATCGAGAGCAGATTATCAGGAGCAGATTGGGAGGCCATCAAGAGCAGATTATCAGGAGCATATTGGGAGGCCATCAAGAGCAGATTGGAGGTACAGGCCATACTAG
Protein sequence

>Msa0343190

MEQRKLVVLGIPWDVDTEGLKEYMSKYGELEDCIVMKSWCGVESCSDAIIWCLHFVGAAVVAPNRAGIIHSLVSYRSRTWEGKSERKEGKPVVAFLPTRTDLPERSTGRSRGFGYVTFASVDDAKEVLSGEHVLGDRMLEVKVATPKEEMRAPAKKVTRIFVARIPPSVTEETFRSHFEKYGDITDLYMPKDQGSKMHRGIGFITFANAESVENLMSETHELGGSAVVVDRATPKASLYSFSFYGRIICEIREWIFEDDVKPTGRMSQGGGYGAYNAYISTATRYAALGAPTLYDHPGPIYGRGEPRRRISKKIFVGRLPPEANSEDLRQYFGRFGRIEDVYIPRDPKRTGHRGFGFVTFADEGVADRVSLRPHEICGHEVAIDSATPVDDARPSGNFMMNNSMESFGGYGGPVRSYGRMYGGLDYDDWGYGVPSVRPSRAEYQEQLGRPSRADYQEQIGRPSRADYQEHIGRPSRADWRYRPY*