Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0004060 | sp|Q84WL9|AP2S_ARATH | 94.366 | 142 | 8 | 0 | 1 | 142 | 1 | 142 | 2.78e-95 | 273 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0004060 | Msa0006880 | 0.866358 | 3.022788e-65 | -8.615850e-47 |
| Msa0004060 | Msa0007850 | 0.811794 | 5.857144e-51 | -8.615850e-47 |
| Msa0004060 | Msa0015140 | 0.806882 | 6.627336e-50 | -8.615850e-47 |
| Msa0004060 | Msa0015680 | 0.802385 | 5.753180e-49 | -8.615850e-47 |
| Msa0004060 | Msa0027580 | 0.815201 | 1.043626e-51 | -8.615850e-47 |
| Msa0004060 | Msa0029260 | 0.820123 | 8.099147e-53 | -8.615850e-47 |
| Msa0004060 | Msa0033880 | 0.838619 | 2.581659e-57 | -8.615850e-47 |
| Msa0004060 | Msa0043170 | 0.808322 | 3.279040e-50 | -8.615850e-47 |
| Msa0004060 | Msa0046760 | 0.837618 | 4.673292e-57 | -8.615850e-47 |
| Msa0004060 | Msa0047160 | 0.801453 | 8.940606e-49 | -8.615850e-47 |
| Msa0004060 | Msa0052350 | -0.825663 | 4.144972e-54 | -8.615850e-47 |
| Msa0004060 | Msa0055150 | 0.860266 | 2.328805e-63 | -8.615850e-47 |
| Msa0004060 | Msa0065010 | 0.806117 | 9.611808e-50 | -8.615850e-47 |
| Msa0004060 | Msa0068760 | 0.812264 | 4.626578e-51 | -8.615850e-47 |
| Msa0004060 | Msa0075340 | 0.813191 | 2.900073e-51 | -8.615850e-47 |
| Msa0004060 | Msa0090030 | 0.828966 | 6.701304e-55 | -8.615850e-47 |
| Msa0004060 | Msa0094920 | 0.800011 | 1.760516e-48 | -8.615850e-47 |
| Msa0004060 | Msa0097360 | -0.805245 | 1.465055e-49 | -8.615850e-47 |
| Msa0004060 | Msa0097600 | 0.825996 | 3.456207e-54 | -8.615850e-47 |
| Msa0004060 | Msa0097950 | 0.809273 | 2.052963e-50 | -8.615850e-47 |
| Msa0004060 | Msa0097990 | 0.807134 | 5.861975e-50 | -8.615850e-47 |
| Msa0004060 | Msa0100800 | 0.850855 | 1.295909e-60 | -8.615850e-47 |
| Msa0004060 | Msa0101180 | 0.805950 | 1.041958e-49 | -8.615850e-47 |
| Msa0004060 | Msa0102400 | 0.849540 | 3.028169e-60 | -8.615850e-47 |
| Msa0004060 | Msa0104610 | 0.812394 | 4.334802e-51 | -8.615850e-47 |
| Msa0004060 | Msa0108870 | 0.830187 | 3.381334e-55 | -8.615850e-47 |
| Msa0004060 | Msa0112300 | -0.817157 | 3.814255e-52 | -8.615850e-47 |
| Msa0004060 | Msa0115370 | 0.802428 | 5.637494e-49 | -8.615850e-47 |
| Msa0004060 | Msa0121820 | 0.807355 | 5.264369e-50 | -8.615850e-47 |
| Msa0004060 | Msa0126770 | 0.838006 | 3.715212e-57 | -8.615850e-47 |
| Msa0004060 | Msa0126840 | 0.803360 | 3.618616e-49 | -8.615850e-47 |
| Msa0004060 | Msa0126880 | 0.818672 | 1.734507e-52 | -8.615850e-47 |
| Msa0004060 | Msa0127040 | 0.821224 | 4.523978e-53 | -8.615850e-47 |
| Msa0004060 | Msa0127850 | 0.841748 | 3.936749e-58 | -8.615850e-47 |
| Msa0004060 | Msa0131450 | 0.853671 | 2.047915e-61 | -8.615850e-47 |
| Msa0004060 | Msa0140400 | 0.801302 | 9.601296e-49 | -8.615850e-47 |
| Msa0004060 | Msa0140520 | -0.805788 | 1.127192e-49 | -8.615850e-47 |
| Msa0004060 | Msa0146770 | 0.819521 | 1.111816e-52 | -8.615850e-47 |
| Msa0004060 | Msa0165440 | 0.828257 | 9.942716e-55 | -8.615850e-47 |
| Msa0004060 | Msa0165950 | 0.803589 | 3.244195e-49 | -8.615850e-47 |
| Msa0004060 | Msa0166750 | 0.844599 | 6.840634e-59 | -8.615850e-47 |
| Msa0004060 | Msa0167480 | 0.801908 | 7.212726e-49 | -8.615850e-47 |
| Msa0004060 | Msa0169300 | 0.816939 | 4.269374e-52 | -8.615850e-47 |
| Msa0004060 | Msa0171850 | 0.831034 | 2.098402e-55 | -8.615850e-47 |
| Msa0004060 | Msa0174000 | 0.837978 | 3.776673e-57 | -8.615850e-47 |
| Msa0004060 | Msa0175290 | -0.822399 | 2.418812e-53 | -8.615850e-47 |
| Msa0004060 | Msa0177210 | 0.824308 | 8.658924e-54 | -8.615850e-47 |
| Msa0004060 | Msa0177270 | 0.825026 | 5.865721e-54 | -8.615850e-47 |
| Msa0004060 | Msa0177700 | -0.806214 | 9.171857e-50 | -8.615850e-47 |
| Msa0004060 | Msa0182280 | 0.830588 | 2.699427e-55 | -8.615850e-47 |
| Msa0004060 | Msa0183460 | 0.802398 | 5.718914e-49 | -8.615850e-47 |
| Msa0004060 | Msa0193600 | 0.800120 | 1.672499e-48 | -8.615850e-47 |
| Msa0004060 | Msa0198520 | 0.808377 | 3.191929e-50 | -8.615850e-47 |
| Msa0004060 | Msa0198530 | 0.815508 | 8.919867e-52 | -8.615850e-47 |
| Msa0004060 | Msa0208810 | 0.846422 | 2.194147e-59 | -8.615850e-47 |
| Msa0004060 | Msa0219250 | -0.809762 | 1.612322e-50 | -8.615850e-47 |
| Msa0004060 | Msa0221600 | 0.807079 | 6.023627e-50 | -8.615850e-47 |
| Msa0004060 | Msa0227400 | 0.829875 | 4.029393e-55 | -8.615850e-47 |
| Msa0004060 | Msa0231660 | 0.824133 | 9.521777e-54 | -8.615850e-47 |
| Msa0004060 | Msa0239490 | 0.802515 | 5.408309e-49 | -8.615850e-47 |
| Msa0004060 | Msa0239940 | 0.827039 | 1.949754e-54 | -8.615850e-47 |
| Msa0004060 | Msa0258880 | -0.805657 | 1.200892e-49 | -8.615850e-47 |
| Msa0004060 | Msa0259160 | 0.805097 | 1.573792e-49 | -8.615850e-47 |
| Msa0004060 | Msa0262480 | 0.814998 | 1.157619e-51 | -8.615850e-47 |
| Msa0004060 | Msa0274100 | 0.818199 | 2.220674e-52 | -8.615850e-47 |
| Msa0004060 | Msa0275400 | -0.818225 | 2.190280e-52 | -8.615850e-47 |
| Msa0004060 | Msa0280430 | 0.801735 | 7.825776e-49 | -8.615850e-47 |
| Msa0004060 | Msa0288730 | 0.814673 | 1.366456e-51 | -8.615850e-47 |
| Msa0004060 | Msa0291520 | 0.858815 | 6.358009e-63 | -8.615850e-47 |
| Msa0004060 | Msa0300350 | 0.818093 | 2.346471e-52 | -8.615850e-47 |
| Msa0004060 | Msa0304290 | 0.802159 | 6.402017e-49 | -8.615850e-47 |
| Msa0004060 | Msa0304330 | 0.805039 | 1.618390e-49 | -8.615850e-47 |
| Msa0004060 | Msa0304660 | 0.801925 | 7.152816e-49 | -8.615850e-47 |
| Msa0004060 | Msa0308200 | 0.817189 | 3.752581e-52 | -8.615850e-47 |
| Msa0004060 | Msa0308220 | 0.835204 | 1.922803e-56 | -8.615850e-47 |
| Msa0004060 | Msa0331700 | 0.800806 | 1.212757e-48 | -8.615850e-47 |
| Msa0004060 | Msa0343190 | 0.821865 | 3.216792e-53 | -8.615850e-47 |
| Msa0004060 | Msa0346990 | 0.802055 | 6.728112e-49 | -8.615850e-47 |
| Msa0004060 | Msa0365860 | 0.800456 | 1.429236e-48 | -8.615850e-47 |
| Msa0004060 | Msa0370160 | -0.812434 | 4.247807e-51 | -8.615850e-47 |
| Msa0004060 | Msa0384670 | 0.805851 | 1.093367e-49 | -8.615850e-47 |
| Msa0004060 | Msa0384880 | 0.820440 | 6.850040e-53 | -8.615850e-47 |
| Msa0004060 | Msa0387910 | 0.801618 | 8.270984e-49 | -8.615850e-47 |
| Msa0004060 | Msa0392200 | 0.805012 | 1.639136e-49 | -8.615850e-47 |
| Msa0004060 | Msa0419520 | 0.857976 | 1.130517e-62 | -8.615850e-47 |
| Msa0004060 | Msa0428240 | 0.800441 | 1.438968e-48 | -8.615850e-47 |
| Msa0004060 | Msa0436200 | 0.854651 | 1.067912e-61 | -8.615850e-47 |
| Msa0004060 | Msa0437510 | 0.820557 | 6.440792e-53 | -8.615850e-47 |
| Msa0004060 | Msa0437690 | -0.804557 | 2.039742e-49 | -8.615850e-47 |
| Msa0004060 | Msa0439890 | 0.843443 | 1.396714e-58 | -8.615850e-47 |
| Msa0004060 | Msa0465550 | 0.825579 | 4.340347e-54 | -8.615850e-47 |
| Msa0004060 | Msa0474700 | 0.838179 | 3.354122e-57 | -8.615850e-47 |
| Msa0004060 | Msa0478580 | 0.804129 | 2.505312e-49 | -8.615850e-47 |
| Msa0004060 | Msa0505380 | 0.803235 | 3.840006e-49 | -8.615850e-47 |
| Msa0004060 | Msa0511490 | 0.818842 | 1.586881e-52 | -8.615850e-47 |
| Msa0004060 | Msa0519130 | 0.810868 | 9.307390e-51 | -8.615850e-47 |
| Msa0004060 | Msa0524590 | 0.835136 | 2.000300e-56 | -8.615850e-47 |
| Msa0004060 | Msa0527910 | 0.818962 | 1.490667e-52 | -8.615850e-47 |
| Msa0004060 | Msa0536790 | 0.822161 | 2.746825e-53 | -8.615850e-47 |
| Msa0004060 | Msa0542160 | 0.829545 | 4.847630e-55 | -8.615850e-47 |
| Msa0004060 | Msa0545060 | 0.803369 | 3.602784e-49 | -8.615850e-47 |
| Msa0004060 | Msa0546570 | 0.819759 | 9.810477e-53 | -8.615850e-47 |
| Msa0004060 | Msa0549590 | 0.827849 | 1.246685e-54 | -8.615850e-47 |
| Msa0004060 | Msa0550540 | 0.821855 | 3.234114e-53 | -8.615850e-47 |
| Msa0004060 | Msa0550570 | 0.835336 | 1.780240e-56 | -8.615850e-47 |
| Msa0004060 | Msa0556790 | 0.814156 | 1.778480e-51 | -8.615850e-47 |
| Msa0004060 | Msa0561430 | 0.820173 | 7.890886e-53 | -8.615850e-47 |
| Msa0004060 | Msa0578090 | 0.841139 | 5.694033e-58 | -8.615850e-47 |
| Msa0004060 | Msa0580950 | 0.819905 | 9.084419e-53 | -8.615850e-47 |
| Msa0004060 | Msa0586850 | 0.855800 | 4.948051e-62 | -8.615850e-47 |
| Msa0004060 | Msa0603670 | 0.848268 | 6.831205e-60 | -8.615850e-47 |
| Msa0004060 | Msa0609000 | 0.847869 | 8.801148e-60 | -8.615850e-47 |
| Msa0004060 | Msa0610390 | 0.800379 | 1.481924e-48 | -8.615850e-47 |
| Msa0004060 | Msa0612390 | 0.804900 | 1.730013e-49 | -8.615850e-47 |
| Msa0004060 | Msa0614990 | 0.802839 | 4.636409e-49 | -8.615850e-47 |
| Msa0004060 | Msa0618200 | -0.817666 | 2.929771e-52 | -8.615850e-47 |
| Msa0004060 | Msa0618930 | 0.828439 | 8.985441e-55 | -8.615850e-47 |
| Msa0004060 | Msa0619180 | 0.821250 | 4.460896e-53 | -8.615850e-47 |
| Msa0004060 | Msa0619920 | 0.823623 | 1.253645e-53 | -8.615850e-47 |
| Msa0004060 | Msa0620330 | 0.818211 | 2.206149e-52 | -8.615850e-47 |
| Msa0004060 | Msa0626680 | 0.847683 | 9.900283e-60 | -8.615850e-47 |
| Msa0004060 | Msa0641140 | 0.810352 | 1.202854e-50 | -8.615850e-47 |
| Msa0004060 | Msa0646130 | 0.847941 | 8.409127e-60 | -8.615850e-47 |
| Msa0004060 | Msa0647930 | 0.802777 | 4.776756e-49 | -8.615850e-47 |
| Msa0004060 | Msa0651150 | 0.816019 | 6.862770e-52 | -8.615850e-47 |
| Msa0004060 | Msa0652300 | 0.805792 | 1.125133e-49 | -8.615850e-47 |
| Msa0004060 | Msa0652760 | 0.835724 | 1.420768e-56 | -8.615850e-47 |
| Msa0004060 | Msa0654870 | 0.818433 | 1.965233e-52 | -8.615850e-47 |
| Msa0004060 | Msa0656580 | 0.826521 | 2.591314e-54 | -8.615850e-47 |
| Msa0004060 | Msa0659990 | 0.821954 | 3.067028e-53 | -8.615850e-47 |
| Msa0004060 | Msa0664760 | 0.840451 | 8.627466e-58 | -8.615850e-47 |
| Msa0004060 | Msa0679680 | 0.803525 | 3.344389e-49 | -8.615850e-47 |
| Msa0004060 | Msa0682090 | 0.813143 | 2.971062e-51 | -8.615850e-47 |
| Msa0004060 | Msa0682140 | 0.814299 | 1.653251e-51 | -8.615850e-47 |
| Msa0004060 | Msa0694840 | 0.815046 | 1.129652e-51 | -8.615850e-47 |
| Msa0004060 | Msa0704800 | 0.817026 | 4.081754e-52 | -8.615850e-47 |
| Msa0004060 | Msa0705040 | 0.800602 | 1.334752e-48 | -8.615850e-47 |
| Msa0004060 | Msa0706390 | 0.831248 | 1.859045e-55 | -8.615850e-47 |
| Msa0004060 | Msa0707390 | 0.828103 | 1.082758e-54 | -8.615850e-47 |
| Msa0004060 | Msa0719420 | 0.815362 | 9.612018e-52 | -8.615850e-47 |
| Msa0004060 | Msa0735310 | 0.803838 | 2.879557e-49 | -8.615850e-47 |
| Msa0004060 | Msa0744090 | 0.808294 | 3.323552e-50 | -8.615850e-47 |
| Msa0004060 | Msa0750920 | 0.822585 | 2.189192e-53 | -8.615850e-47 |
| Msa0004060 | Msa0756930 | 0.838371 | 2.991759e-57 | -8.615850e-47 |
| Msa0004060 | Msa0758230 | 0.801142 | 1.035165e-48 | -8.615850e-47 |
| Msa0004060 | Msa0774750 | 0.804344 | 2.260339e-49 | -8.615850e-47 |
| Msa0004060 | Msa0781270 | 0.823018 | 1.735669e-53 | -8.615850e-47 |
| Msa0004060 | Msa0789680 | 0.814504 | 1.489549e-51 | -8.615850e-47 |
| Msa0004060 | Msa0802410 | 0.821279 | 4.393328e-53 | -8.615850e-47 |
| Msa0004060 | Msa0803630 | 0.806733 | 7.126136e-50 | -8.615850e-47 |
| Msa0004060 | Msa0806920 | 0.800972 | 1.121554e-48 | -8.615850e-47 |
| Msa0004060 | Msa0814250 | 0.810396 | 1.176834e-50 | -8.615850e-47 |
| Msa0004060 | Msa0817260 | 0.801935 | 7.118803e-49 | -8.615850e-47 |
| Msa0004060 | Msa0818770 | 0.806287 | 8.852583e-50 | -8.615850e-47 |
| Msa0004060 | Msa0819060 | 0.838358 | 3.015710e-57 | -8.615850e-47 |
| Msa0004060 | Msa0825270 | 0.803574 | 3.267108e-49 | -8.615850e-47 |
| Msa0004060 | Msa0825280 | 0.810341 | 1.209641e-50 | -8.615850e-47 |
| Msa0004060 | Msa0830390 | 0.840629 | 7.751946e-58 | -8.615850e-47 |
| Msa0004060 | Msa0836500 | 0.820880 | 5.428849e-53 | -8.615850e-47 |
| Msa0004060 | Msa0850710 | 0.816020 | 6.859145e-52 | -8.615850e-47 |
| Msa0004060 | Msa0851470 | 0.800493 | 1.404361e-48 | -8.615850e-47 |
| Msa0004060 | Msa0859180 | 0.800455 | 1.429731e-48 | -8.615850e-47 |
| Msa0004060 | Msa0865570 | 0.815531 | 8.813783e-52 | -8.615850e-47 |
| Msa0004060 | Msa0879850 | 0.817040 | 4.052606e-52 | -8.615850e-47 |
| Msa0004060 | Msa0879860 | 0.806631 | 7.491273e-50 | -8.615850e-47 |
| Msa0004060 | Msa0888940 | 0.831161 | 1.952755e-55 | -8.615850e-47 |
| Msa0004060 | Msa0895310 | 0.827883 | 1.223430e-54 | -8.615850e-47 |
| Msa0004060 | Msa0898890 | 0.802240 | 6.162126e-49 | -8.615850e-47 |
| Msa0004060 | Msa0901450 | 0.839489 | 1.536750e-57 | -8.615850e-47 |
| Msa0004060 | Msa0925770 | 0.845163 | 4.821183e-59 | -8.615850e-47 |
| Msa0004060 | Msa0947530 | -0.867995 | 9.068786e-66 | -8.615850e-47 |
| Msa0004060 | Msa0960830 | 0.824007 | 1.018958e-53 | -8.615850e-47 |
| Msa0004060 | Msa0963020 | 0.813359 | 2.664215e-51 | -8.615850e-47 |
| Msa0004060 | Msa0966720 | -0.814272 | 1.676719e-51 | -8.615850e-47 |
| Msa0004060 | Msa0980940 | 0.825035 | 5.837668e-54 | -8.615850e-47 |
| Msa0004060 | Msa0981430 | 0.837308 | 5.610694e-57 | -8.615850e-47 |
| Msa0004060 | Msa0990590 | 0.807049 | 6.111822e-50 | -8.615850e-47 |
| Msa0004060 | Msa1001350 | 0.841335 | 5.057788e-58 | -8.615850e-47 |
| Msa0004060 | Msa1002600 | -0.803874 | 2.831006e-49 | -8.615850e-47 |
| Msa0004060 | Msa1025260 | 0.813707 | 2.233044e-51 | -8.615850e-47 |
| Msa0004060 | Msa1025940 | 0.826103 | 3.259235e-54 | -8.615850e-47 |
| Msa0004060 | Msa1029970 | 0.829346 | 5.419038e-55 | -8.615850e-47 |
| Msa0004060 | Msa1030930 | 0.823248 | 1.534554e-53 | -8.615850e-47 |
| Msa0004060 | Msa1040840 | 0.833397 | 5.461549e-56 | -8.615850e-47 |
| Msa0004060 | Msa1041520 | 0.860938 | 1.457199e-63 | -8.615850e-47 |
| Msa0004060 | Msa1069660 | -0.809835 | 1.555035e-50 | -8.615850e-47 |
| Msa0004060 | Msa1070050 | 0.820669 | 6.071858e-53 | -8.615850e-47 |
| Msa0004060 | Msa1070390 | 0.812167 | 4.857973e-51 | -8.615850e-47 |
| Msa0004060 | Msa1071660 | 0.802805 | 4.711980e-49 | -8.615850e-47 |
| Msa0004060 | Msa1081560 | 0.837014 | 6.673032e-57 | -8.615850e-47 |
| Msa0004060 | Msa1082690 | 0.804556 | 2.040977e-49 | -8.615850e-47 |
| Msa0004060 | Msa1083880 | 0.820502 | 6.631573e-53 | -8.615850e-47 |
| Msa0004060 | Msa1089840 | 0.800256 | 1.569264e-48 | -8.615850e-47 |
| Msa0004060 | Msa1093330 | 0.862129 | 6.307683e-64 | -8.615850e-47 |
| Msa0004060 | Msa1100530 | -0.809196 | 2.132309e-50 | -8.615850e-47 |
| Msa0004060 | Msa1109350 | 0.806884 | 6.623274e-50 | -8.615850e-47 |
| Msa0004060 | Msa1120810 | 0.823944 | 1.054213e-53 | -8.615850e-47 |
| Msa0004060 | Msa1126120 | -0.812381 | 4.362347e-51 | -8.615850e-47 |
| Msa0004060 | Msa1126850 | 0.823598 | 1.270802e-53 | -8.615850e-47 |
| Msa0004060 | Msa1127130 | 0.835453 | 1.663562e-56 | -8.615850e-47 |
| Msa0004060 | Msa1131170 | 0.813520 | 2.455783e-51 | -8.615850e-47 |
| Msa0004060 | Msa1135800 | -0.821906 | 3.146306e-53 | -8.615850e-47 |
| Msa0004060 | Msa1135810 | -0.812134 | 4.938528e-51 | -8.615850e-47 |
| Msa0004060 | Msa1145240 | 0.817764 | 2.784013e-52 | -8.615850e-47 |
| Msa0004060 | Msa1158230 | 0.802259 | 6.107199e-49 | -8.615850e-47 |
| Msa0004060 | Msa1158770 | 0.802848 | 4.616419e-49 | -8.615850e-47 |
| Msa0004060 | Msa1166410 | 0.829210 | 5.847713e-55 | -8.615850e-47 |
| Msa0004060 | Msa1166870 | 0.821263 | 4.431693e-53 | -8.615850e-47 |
| Msa0004060 | Msa1173900 | 0.811005 | 8.691763e-51 | -8.615850e-47 |
| Msa0004060 | Msa1179980 | 0.813122 | 3.002985e-51 | -8.615850e-47 |
| Msa0004060 | Msa1198880 | 0.813145 | 2.967843e-51 | -8.615850e-47 |
| Msa0004060 | Msa1201830 | 0.836746 | 7.809151e-57 | -8.615850e-47 |
| Msa0004060 | Msa1202150 | 0.819189 | 1.323667e-52 | -8.615850e-47 |
| Msa0004060 | Msa1202580 | 0.817905 | 2.587612e-52 | -8.615850e-47 |
| Msa0004060 | Msa1207730 | 0.814606 | 1.414027e-51 | -8.615850e-47 |
| Msa0004060 | Msa1223330 | 0.820872 | 5.450625e-53 | -8.615850e-47 |
| Msa0004060 | Msa1226610 | 0.831959 | 1.241949e-55 | -8.615850e-47 |
| Msa0004060 | Msa1227690 | 0.811830 | 5.754527e-51 | -8.615850e-47 |
| Msa0004060 | Msa1253810 | 0.819397 | 1.186847e-52 | -8.615850e-47 |
| Msa0004060 | Msa1254710 | 0.809766 | 1.608480e-50 | -8.615850e-47 |
| Msa0004060 | Msa1270620 | 0.816165 | 6.365988e-52 | -8.615850e-47 |
| Msa0004060 | Msa1270690 | 0.811175 | 7.985555e-51 | -8.615850e-47 |
| Msa0004060 | Msa1280620 | 0.825948 | 3.548315e-54 | -8.615850e-47 |
| Msa0004060 | Msa1294840 | 0.842403 | 2.641421e-58 | -8.615850e-47 |
| Msa0004060 | Msa1294960 | 0.863080 | 3.212200e-64 | -8.615850e-47 |
| Msa0004060 | Msa1310690 | 0.808823 | 2.562476e-50 | -8.615850e-47 |
| Msa0004060 | Msa1317810 | -0.805488 | 1.302909e-49 | -8.615850e-47 |
| Msa0004060 | Msa1331710 | 0.813021 | 3.160180e-51 | -8.615850e-47 |
| Msa0004060 | Msa1333970 | 0.814367 | 1.597013e-51 | -8.615850e-47 |
| Msa0004060 | Msa1340040 | -0.828584 | 8.288451e-55 | -8.615850e-47 |
| Msa0004060 | Msa1340830 | 0.823730 | 1.183340e-53 | -8.615850e-47 |
| Msa0004060 | Msa1355700 | 0.860589 | 1.859598e-63 | -8.615850e-47 |
| Msa0004060 | Msa1363700 | 0.827482 | 1.526796e-54 | -8.615850e-47 |
| Msa0004060 | Msa1364060 | 0.806471 | 8.096690e-50 | -8.615850e-47 |
| Msa0004060 | Msa1365860 | 0.850273 | 1.888772e-60 | -8.615850e-47 |
| Msa0004060 | Msa1370620 | 0.805148 | 1.535172e-49 | -8.615850e-47 |
| Msa0004060 | Msa1371090 | 0.817419 | 3.330157e-52 | -8.615850e-47 |
| Msa0004060 | Msa1408150 | 0.811040 | 8.541147e-51 | -8.615850e-47 |
| Msa0004060 | Msa1412660 | 0.806077 | 9.800679e-50 | -8.615850e-47 |
| Msa0004060 | Msa1418960 | -0.824308 | 8.658924e-54 | -8.615850e-47 |
| Msa0004060 | Msa1426920 | 0.806710 | 7.207768e-50 | -8.615850e-47 |
| Msa0004060 | Msa1438640 | 0.801908 | 7.210776e-49 | -8.615850e-47 |
| Msa0004060 | Msa1442220 | -0.823148 | 1.618610e-53 | -8.615850e-47 |
| Msa0004060 | Msa1449910 | 0.818606 | 1.795298e-52 | -8.615850e-47 |
| Msa0004060 | Msa1466090 | 0.804374 | 2.227480e-49 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0004060 | MtrunA17_Chr1g0156591 | 100.000 | 142 | 0 | 0 | 1 | 142 | 1 | 142 | 7.55e-102 | 287 |
| Msa0004060 | MtrunA17_Chr5g0448531 | 55.319 | 141 | 63 | 0 | 1 | 141 | 1 | 141 | 1.92e-54 | 168 |
| Msa0004060 | MtrunA17_Chr7g0263061 | 46.763 | 139 | 74 | 0 | 2 | 140 | 3 | 141 | 1.59e-38 | 127 |
| Msa0004060 | MtrunA17_Chr8g0389621 | 46.763 | 139 | 74 | 0 | 2 | 140 | 3 | 141 | 1.59e-38 | 127 |
| Msa0004060 | MtrunA17_Chr5g0440601 | 52.778 | 108 | 51 | 0 | 34 | 141 | 11 | 118 | 3.54e-37 | 124 |
| Msa0004060 | MtrunA17_Chr8g0373311 | 39.597 | 149 | 81 | 3 | 1 | 142 | 1 | 147 | 3.56e-30 | 107 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0004060 | AT1G47830.1 | 94.366 | 142 | 8 | 0 | 1 | 142 | 1 | 142 | 2.83e-96 | 273 |
| Msa0004060 | AT4G35410.2 | 54.610 | 141 | 64 | 0 | 1 | 141 | 1 | 141 | 1.44e-53 | 166 |
| Msa0004060 | AT2G17380.1 | 53.901 | 141 | 65 | 0 | 1 | 141 | 1 | 141 | 1.72e-53 | 166 |
| Msa0004060 | AT2G19790.1 | 46.763 | 139 | 74 | 0 | 2 | 140 | 3 | 141 | 1.20e-38 | 128 |
| Msa0004060 | AT4G35410.1 | 53.061 | 98 | 46 | 0 | 1 | 98 | 1 | 98 | 4.50e-33 | 112 |
| Msa0004060 | AT3G50860.1 | 38.776 | 147 | 85 | 1 | 1 | 142 | 1 | 147 | 1.03e-32 | 114 |
| Msa0004060 | AT3G50860.2 | 37.931 | 145 | 85 | 1 | 1 | 140 | 1 | 145 | 1.50e-31 | 110 |
Find 86 sgRNAs with CRISPR-Local
Find 258 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CTCAACGAAATTAGTGTATT+TGG | 0.082600 | 1_1:+6533903 | Msa0004050:three_prime_UTR |
| ATTCTATATGTGAAGAAATT+AGG | 0.140891 | 1_1:+6530724 | Msa0004050:exon |
| TTTGATTTGAATTGCGATTA+TGG | 0.202006 | 1_1:+6534147 | Msa0004050:three_prime_UTR |
| TTTCTTCCACTTTGCCAATT+AGG | 0.222523 | 1_1:-6530545 | Msa0004060:three_prime_UTR |
| CCATTTGTTTGTTGAAATCT+TGG | 0.225064 | 1_1:-6532650 | Msa0004060:CDS |
| GAACACACAGATAATGAAAA+AGG | 0.229430 | 1_1:+6530929 | Msa0004050:three_prime_UTR |
| TTCAAGAGGAACATAGTATT+TGG | 0.241775 | 1_1:+6533984 | Msa0004050:three_prime_UTR |
| CCTACATCACAAGAAATATT+TGG | 0.257970 | 1_1:+6530620 | Msa0004050:CDS |
| ACTTTGCCAATTAGGATTCT+TGG | 0.266267 | 1_1:-6530537 | Msa0004060:three_prime_UTR |
| CAATGTCTGCGAACTTGATT+TGG | 0.278261 | 1_1:-6532614 | Msa0004060:CDS |
| CAATTATATGGAACTCAATA+TGG | 0.313814 | 1_1:+6530419 | Msa0004050:CDS |
| TTCTATATGTGAAGAAATTA+GGG | 0.352386 | 1_1:+6530725 | Msa0004050:exon |
| TCAACGAAATTAGTGTATTT+GGG | 0.354296 | 1_1:+6533904 | Msa0004050:three_prime_UTR |
| GAATGAATTCATCAAGTATA+AGG | 0.361705 | 1_1:+6531453 | Msa0004050:three_prime_UTR |
| GTTGTAGACATTCAGAAAGT+TGG | 0.365354 | 1_1:-6530965 | Msa0004060:three_prime_UTR |
| GTATTCGACCTTGTGTTTCT+CGG | 0.367660 | 1_1:+6533957 | Msa0004050:three_prime_UTR |
| AGTGGACCAAGAATCCTAAT+TGG | 0.367921 | 1_1:+6530531 | Msa0004050:CDS |
| TTGTAGACATTCAGAAAGTT+GGG | 0.378542 | 1_1:-6530964 | Msa0004060:three_prime_UTR |
| CCAAATATTTCTTGTGATGT+AGG | 0.384332 | 1_1:-6530620 | Msa0004060:three_prime_UTR |
| GGGTATGAGGAAAGATGATT+TGG | 0.386388 | 1_1:-6530598 | Msa0004060:three_prime_UTR |
| TCTTGCCCATTTGTCTTGGA+TGG | 0.392860 | 1_1:-6530690 | Msa0004060:three_prime_UTR |
| TCTTGTGATGTAGGGGTATG+AGG | 0.395732 | 1_1:-6530611 | Msa0004060:three_prime_UTR |
| TCCAACGATTGAAGTAATCT+TGG | 0.396123 | 1_1:-6530645 | Msa0004060:three_prime_UTR |
| TGATGATTTACTATTGCAAT+TGG | 0.398465 | 1_1:-6531093 | Msa0004060:three_prime_UTR |
| AACATAGTATTTGGCTAAAC+GGG | 0.399817 | 1_1:+6533993 | Msa0004050:three_prime_UTR |
| CTTGCCCATTTGTCTTGGAT+GGG | 0.417595 | 1_1:-6530689 | Msa0004060:three_prime_UTR |
| CAGGCTATCATTGAAAGAAT+GGG | 0.419258 | 1_1:-6531175 | Msa0004060:CDS |
| GAACATAGTATTTGGCTAAA+CGG | 0.419670 | 1_1:+6533992 | Msa0004050:three_prime_UTR |
| CTGAAAATTGCAATATTAAG+TGG | 0.421088 | 1_1:+6530513 | Msa0004050:CDS |
| GGTATGAGGAAAGATGATTT+GGG | 0.428294 | 1_1:-6530597 | Msa0004060:three_prime_UTR |
| GCAGGCTATCATTGAAAGAA+TGG | 0.433845 | 1_1:-6531176 | Msa0004060:intron |
| CAAATATTTCTTGTGATGTA+GGG | 0.435409 | 1_1:-6530619 | Msa0004060:three_prime_UTR |
| ATCTTATTACACCAGTACTT+TGG | 0.438490 | 1_1:-6530755 | Msa0004060:three_prime_UTR |
| ATTATACAGTTCTATATCTC+TGG | 0.448782 | 1_1:+6530864 | Msa0004050:three_prime_UTR |
| CCAAGATTTCAACAAACAAA+TGG | 0.450421 | 1_1:+6532650 | Msa0004050:three_prime_UTR |
| TTGCCCATTTGTCTTGGATG+GGG | 0.457853 | 1_1:-6530688 | Msa0004060:three_prime_UTR |
| GTAATATACCGGAGATATGC+TGG | 0.461155 | 1_1:-6532733 | Msa0004060:CDS |
| CATTCTGTTGCAGAACAGAC+AGG | 0.470525 | 1_1:-6534022 | Msa0004060:CDS |
| AAGATCTTGCCCATTTGTCT+TGG | 0.472158 | 1_1:-6530694 | Msa0004060:three_prime_UTR |
| TAATCGCAATTCAAATCAAA+TGG | 0.474191 | 1_1:-6534144 | Msa0004060:intron |
| TGTATCACTCATTGTGAGAC+GGG | 0.493371 | 1_1:+6530832 | Msa0004050:three_prime_UTR |
| AAGAAGATTTGAACAATGGA+TGG | 0.493880 | 1_1:+6534209 | Msa0004050:three_prime_UTR |
| AGAAATGACTATTCTGCAAT+GGG | 0.495928 | 1_1:+6530563 | Msa0004050:CDS |
| TCCAAGATTACTTCAATCGT+TGG | 0.497011 | 1_1:+6530644 | Msa0004050:CDS |
| ATGTATTATGTACACTTCCA+TGG | 0.500745 | 1_1:-6531011 | Msa0004060:three_prime_UTR |
| TTTGAAAGTGAACAAAAGTA+AGG | 0.502341 | 1_1:-6534262 | Msa0004060:five_prime_UTR |
| AGGGACAGATTCCAAAGTAC+TGG | 0.510784 | 1_1:+6530744 | Msa0004050:three_prime_UTR |
| AAAGAAGAAGATTTGAACAA+TGG | 0.512861 | 1_1:+6534205 | Msa0004050:three_prime_UTR |
| CTTGATGAATTCATTCTAGC+GGG | 0.516282 | 1_1:-6531446 | Msa0004060:CDS |
| TGTTCTGCAACAGAATGAAT+CGG | 0.534099 | 1_1:+6534028 | Msa0004050:intron |
| AAGAAATGACTATTCTGCAA+TGG | 0.540060 | 1_1:+6530562 | Msa0004050:CDS |
| AAAACAGTCCAGCATATCTC+CGG | 0.546650 | 1_1:+6532725 | Msa0004050:three_prime_UTR |
| TGCCCATTTGTCTTGGATGG+GGG | 0.548139 | 1_1:-6530687 | Msa0004060:three_prime_UTR |
| CATTTCAGCAGAGTCACGAC+AGG | 0.554284 | 1_1:-6531123 | Msa0004060:three_prime_UTR |
| GTATGAGGAAAGATGATTTG+GGG | 0.565026 | 1_1:-6530596 | Msa0004060:three_prime_UTR |
| TGTACATAATACATGGCTCA+AGG | 0.566144 | 1_1:+6531020 | Msa0004050:three_prime_UTR |
| TGCAACAAGCAGCTCAAGCT+AGG | 0.574393 | 1_1:+6530486 | Msa0004050:CDS |
| CATAATACATGGCTCAAGGG+TGG | 0.577888 | 1_1:+6531024 | Msa0004050:three_prime_UTR |
| AAGAATCCTAATTGGCAAAG+TGG | 0.585232 | 1_1:+6530539 | Msa0004050:CDS |
| TGTTTCTCGGAATCTTCAAG+AGG | 0.587461 | 1_1:+6533970 | Msa0004050:three_prime_UTR |
| AAATATTTCTTGTGATGTAG+GGG | 0.592599 | 1_1:-6530618 | Msa0004060:three_prime_UTR |
| ACACGAGATTTAAGAAACCA+TGG | 0.601898 | 1_1:+6530994 | Msa0004050:three_prime_UTR |
| ACTTGATGAATTCATTCTAG+CGG | 0.603094 | 1_1:-6531447 | Msa0004060:CDS |
| TATGAGGAAAGATGATTTGG+GGG | 0.607071 | 1_1:-6530595 | Msa0004060:three_prime_UTR |
| TGTAGACATTCAGAAAGTTG+GGG | 0.610223 | 1_1:-6530963 | Msa0004060:three_prime_UTR |
| ATAATACATGGCTCAAGGGT+GGG | 0.610710 | 1_1:+6531025 | Msa0004050:three_prime_UTR |
| GTACATAATACATGGCTCAA+GGG | 0.615332 | 1_1:+6531021 | Msa0004050:three_prime_UTR |
| CAAATACACTAATTTCGTTG+AGG | 0.615858 | 1_1:-6533902 | Msa0004060:intron |
| GTACACACAAGGTAATATAC+CGG | 0.616996 | 1_1:-6532744 | Msa0004060:CDS |
| GTGTATCACTCATTGTGAGA+CGG | 0.617358 | 1_1:+6530831 | Msa0004050:three_prime_UTR |
| GGAGTACGACGACGTTATTG+TGG | 0.617611 | 1_1:+6534230 | Msa0004050:three_prime_UTR |
| GAAACACAAGGTCGAATACG+AGG | 0.625603 | 1_1:-6533953 | Msa0004060:CDS |
| ATGGAAGTGTACATAATACA+TGG | 0.629812 | 1_1:+6531013 | Msa0004050:three_prime_UTR |
| CTAACTACAAAGAAGCACAA+TGG | 0.630559 | 1_1:+6530894 | Msa0004050:three_prime_UTR |
| ACTGCAAGAAACAAGCAAGA+AGG | 0.630829 | 1_1:-6531420 | Msa0004060:intron |
| TGGGATCTCTATTTACGACA+AGG | 0.631018 | 1_1:+6533923 | Msa0004050:three_prime_UTR |
| GTTGCAGTTTCGTACACACA+AGG | 0.632236 | 1_1:-6532755 | Msa0004060:intron |
| AGGCTATCATTGAAAGAATG+GGG | 0.635618 | 1_1:-6531174 | Msa0004060:CDS |
| ATTCTGTTGCAGAACAGACA+GGG | 0.638809 | 1_1:-6534021 | Msa0004060:CDS |
| TGACATCACTGATAATGAGT+TGG | 0.649266 | 1_1:-6532689 | Msa0004060:CDS |
| TGAAGATTCCGAGAAACACA+AGG | 0.650445 | 1_1:-6533965 | Msa0004060:CDS |
| GGCTATCATTGAAAGAATGG+GGG | 0.667109 | 1_1:-6531173 | Msa0004060:CDS |
| GTATCACTCATTGTGAGACG+GGG | 0.677728 | 1_1:+6530833 | Msa0004050:three_prime_UTR |
| ATTTCAGCAGAGTCACGACA+GGG | 0.688002 | 1_1:-6531122 | Msa0004060:three_prime_UTR |
| TATCACTCATTGTGAGACGG+GGG | 0.725206 | 1_1:+6530834 | Msa0004050:three_prime_UTR |
| ATGAGGAAAGATGATTTGGG+GGG | 0.787407 | 1_1:-6530594 | Msa0004060:three_prime_UTR |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAGTAAATATGCATTATTTA+TGG | + | chr1_1:6530824-6530843 | Msa0004050:three_prime_UTR | 15.0% |
| !! | TTAAATAATAACCGTTTAAT+GGG | - | chr1_1:6531899-6531918 | Msa0004060:intron | 15.0% |
| !! | TTTATGATACAAAATAATAG+TGG | - | chr1_1:6532326-6532345 | Msa0004060:intron | 15.0% |
| !!! | AAATAATAGTGGAATATAAA+AGG | - | chr1_1:6532337-6532356 | Msa0004060:intron | 15.0% |
| !!! | AATAATAGTGGAATATAAAA+GGG | - | chr1_1:6532338-6532357 | Msa0004060:intron | 15.0% |
| !!! | TTTTTTAGAACAAAAACATA+TGG | + | chr1_1:6532564-6532583 | Msa0004050:intron | 15.0% |
| !!! | ATAAATTAATTTCCCCTTTT+TGG | - | chr1_1:6530605-6530624 | Msa0004060:three_prime_UTR | 20.0% |
| !! | TAATGAGTTCAATACAAATA+TGG | - | chr1_1:6530874-6530893 | Msa0004060:three_prime_UTR | 20.0% |
| !!! | TGGTTTTTACACAATAATAA+GGG | + | chr1_1:6531231-6531250 | Msa0004050:intron | 20.0% |
| !!! | TTGGTTTTTACACAATAATA+AGG | + | chr1_1:6531232-6531251 | Msa0004050:intron | 20.0% |
| !! | GTTAAATAATAACCGTTTAA+TGG | - | chr1_1:6531898-6531917 | Msa0004060:intron | 20.0% |
| !! | ATTTATAGAAAACTATGTCT+CGG | - | chr1_1:6532284-6532303 | Msa0004060:intron | 20.0% |
| !!! | AAGGACATTTTTCATATATA+TGG | + | chr1_1:6532763-6532782 | Msa0004050:intron | 20.0% |
| !!! | TCACTTTTTTCATTTGTTTT+TGG | - | chr1_1:6532967-6532986 | Msa0004060:intron | 20.0% |
| !!! | TTTAGTTTTATCTGATTTGA+AGG | - | chr1_1:6533205-6533224 | Msa0004060:intron | 20.0% |
| !! | TTCTATATGTGAAGAAATTA+GGG | + | chr1_1:6533963-6533982 | Msa0004050:three_prime_UTR | 20.0% |
| !! | ATTCTATATGTGAAGAAATT+AGG | + | chr1_1:6533964-6533983 | Msa0004050:three_prime_UTR | 20.0% |
| ! | AAAGAAGAAGATTTGAACAA+TGG | + | chr1_1:6530483-6530502 | Msa0004050:CDS | 25.0% |
| !!! | TTTGATTTGAATTGCGATTA+TGG | + | chr1_1:6530541-6530560 | Msa0004050:CDS | 25.0% |
| ! | TAATCGCAATTCAAATCAAA+TGG | - | chr1_1:6530541-6530560 | Msa0004060:three_prime_UTR | 25.0% |
| ! | TCAACGAAATTAGTGTATTT+GGG | + | chr1_1:6530784-6530803 | Msa0004050:three_prime_UTR | 25.0% |
| !! | TTTCACTTGTGATAATGATA+TGG | + | chr1_1:6531121-6531140 | Msa0004050:three_prime_UTR | 25.0% |
| !!! | TTCGTTTTTGCACAATAATA+AGG | + | chr1_1:6531203-6531222 | Msa0004050:intron | 25.0% |
| !! | GTTTTTACACAATAATAAGG+GGG | + | chr1_1:6531229-6531248 | Msa0004050:intron | 25.0% |
| !! | GGTTTTTACACAATAATAAG+GGG | + | chr1_1:6531230-6531249 | Msa0004050:intron | 25.0% |
| ! | TATTGTGTAAAAACCAAGTT+CGG | - | chr1_1:6531235-6531254 | Msa0004060:intron | 25.0% |
| !! | AAGAAATATTTTACCGAACT+TGG | + | chr1_1:6531251-6531270 | Msa0004050:intron | 25.0% |
| ! | ACCAAAATTTCATGATATCA+AGG | + | chr1_1:6531296-6531315 | Msa0004050:intron | 25.0% |
| !!! | AATTTTGGTTTACGATTCTA+TGG | - | chr1_1:6531307-6531326 | Msa0004060:intron | 25.0% |
| !! | ATCTTGTTGTCAATAACTTT+AGG | - | chr1_1:6531386-6531405 | Msa0004060:intron | 25.0% |
| !!! | AATAACTTTAGGATCTTTCT+AGG | - | chr1_1:6531397-6531416 | Msa0004060:intron | 25.0% |
| !! | AGATTTTCAACCAATTAACT+AGG | + | chr1_1:6531610-6531629 | Msa0004050:intron | 25.0% |
| ! | AACAAATGTTACCCATTAAA+CGG | + | chr1_1:6531913-6531932 | Msa0004050:intron | 25.0% |
| ! | CATGATTACTGAAAAACAAA+AGG | + | chr1_1:6532136-6532155 | Msa0004050:intron | 25.0% |
| !!! | TTGTTTTTCAGTAATCATGT+AGG | - | chr1_1:6532137-6532156 | Msa0004060:intron | 25.0% |
| !!! | TGTTTTTCAGTAATCATGTA+GGG | - | chr1_1:6532138-6532157 | Msa0004060:intron | 25.0% |
| ! | TGCTTAGATATTCAAAACAT+TGG | - | chr1_1:6532177-6532196 | Msa0004060:intron | 25.0% |
| ! | GTTATCTATCTTTGTATTGT+TGG | - | chr1_1:6532212-6532231 | Msa0004060:intron | 25.0% |
| ! | GCAATTGCAAATTATTTACT+AGG | + | chr1_1:6532728-6532747 | Msa0004050:three_prime_UTR | 25.0% |
| ! | TATATGAAAAATGTCCTTAC+AGG | - | chr1_1:6532765-6532784 | Msa0004060:intron | 25.0% |
| ! | AAAAATTTGTACACACAACA+AGG | + | chr1_1:6532818-6532837 | Msa0004050:intron | 25.0% |
| ! | GTATGTTAAATTAGACACAA+TGG | + | chr1_1:6533049-6533068 | Msa0004050:intron | 25.0% |
| ! | GAATGAATTCATCAAGTATA+AGG | + | chr1_1:6533235-6533254 | Msa0004050:intron | 25.0% |
| ! | TGATGATTTACTATTGCAAT+TGG | - | chr1_1:6533592-6533611 | Msa0004060:intron | 25.0% |
| ! | AACACACAGATAATGAAAAA+GGG | + | chr1_1:6533758-6533777 | Msa0004050:intron | 25.0% |
| ! | ATTATACAGTTCTATATCTC+TGG | + | chr1_1:6533824-6533843 | Msa0004050:intron | 25.0% |
| ! | CAAATATTTCTTGTGATGTA+GGG | - | chr1_1:6534066-6534085 | Msa0004060:intron | 25.0% |
| ! | AAATATTTCTTGTGATGTAG+GGG | - | chr1_1:6534067-6534086 | Msa0004060:intron | 25.0% |
| ! | CTGAAAATTGCAATATTAAG+TGG | + | chr1_1:6534175-6534194 | Msa0004050:three_prime_UTR | 25.0% |
| AAGAAGATTTGAACAATGGA+TGG | + | chr1_1:6530479-6530498 | Msa0004050:CDS | 30.0% | |
| ! | TTAATTTCCCCTTTTTGGAT+TGG | - | chr1_1:6530610-6530629 | Msa0004060:three_prime_UTR | 30.0% |
| AACATAGTATTTGGCTAAAC+GGG | + | chr1_1:6530695-6530714 | Msa0004050:CDS | 30.0% | |
| GAACATAGTATTTGGCTAAA+CGG | + | chr1_1:6530696-6530715 | Msa0004050:CDS | 30.0% | |
| TTCAAGAGGAACATAGTATT+TGG | + | chr1_1:6530704-6530723 | Msa0004050:CDS | 30.0% | |
| CTCAACGAAATTAGTGTATT+TGG | + | chr1_1:6530785-6530804 | Msa0004050:three_prime_UTR | 30.0% | |
| CAAATACACTAATTTCGTTG+AGG | - | chr1_1:6530783-6530802 | Msa0004060:three_prime_UTR | 30.0% | |
| ACAATTTATCCCACTAAATG+GGG | + | chr1_1:6530943-6530962 | Msa0004050:three_prime_UTR | 30.0% | |
| GACAATTTATCCCACTAAAT+GGG | + | chr1_1:6530944-6530963 | Msa0004050:three_prime_UTR | 30.0% | |
| TTGAAATATTCATCGTCTCA+TGG | - | chr1_1:6531012-6531031 | Msa0004060:three_prime_UTR | 30.0% | |
| AATTAGTCCCTAACTTTGTA+GGG | + | chr1_1:6531053-6531072 | Msa0004050:three_prime_UTR | 30.0% | |
| AAATTAGTCCCTAACTTTGT+AGG | + | chr1_1:6531054-6531073 | Msa0004050:three_prime_UTR | 30.0% | |
| TACAAAGTTAGGGACTAATT+TGG | - | chr1_1:6531053-6531072 | Msa0004060:three_prime_UTR | 30.0% | |
| GCAGAGTTATAAATTTCTCA+AGG | + | chr1_1:6531099-6531118 | Msa0004050:three_prime_UTR | 30.0% | |
| AAGTGAAAATGACTGTTTGA+AGG | - | chr1_1:6531133-6531152 | Msa0004060:three_prime_UTR | 30.0% | |
| TTTCTTAGAGAGTTGCTTAA+AGG | - | chr1_1:6531265-6531284 | Msa0004060:intron | 30.0% | |
| ! | GCCTTGATATCATGAAATTT+TGG | - | chr1_1:6531292-6531311 | Msa0004060:intron | 30.0% |
| ! | TATAAGTATTGTGTGTGATG+TGG | + | chr1_1:6531358-6531377 | Msa0004050:intron | 30.0% |
| AATTACTGTTCACAGATGAT+GGG | + | chr1_1:6531770-6531789 | Msa0004050:intron | 30.0% | |
| AAATTACTGTTCACAGATGA+TGG | + | chr1_1:6531771-6531790 | Msa0004050:intron | 30.0% | |
| TGTGAACAGTAATTTATCTG+TGG | - | chr1_1:6531776-6531795 | Msa0004060:intron | 30.0% | |
| ! | GAAGCTGTAGTTCTATATAT+TGG | - | chr1_1:6531856-6531875 | Msa0004060:intron | 30.0% |
| CCAAGATTTCAACAAACAAA+TGG | + | chr1_1:6532038-6532057 | Msa0004050:intron | 30.0% | |
| ! | CCATTTGTTTGTTGAAATCT+TGG | - | chr1_1:6532035-6532054 | Msa0004060:intron | 30.0% |
| !!! | TTTGGTTTTTAACTTCCACA+AGG | - | chr1_1:6532089-6532108 | Msa0004060:intron | 30.0% |
| TGACAAAATAACAAACCTTG+TGG | + | chr1_1:6532107-6532126 | Msa0004050:intron | 30.0% | |
| !! | GTTTTTCAGTAATCATGTAG+GGG | - | chr1_1:6532139-6532158 | Msa0004060:intron | 30.0% |
| ! | TGGTAATGCTATGATGATAT+TGG | - | chr1_1:6532232-6532251 | Msa0004060:intron | 30.0% |
| GGTAATGCTATGATGATATT+GGG | - | chr1_1:6532233-6532252 | Msa0004060:intron | 30.0% | |
| AATATAAAAGGGTAGATGGA+TGG | - | chr1_1:6532349-6532368 | Msa0004060:intron | 30.0% | |
| ATATAAAAGGGTAGATGGAT+GGG | - | chr1_1:6532350-6532369 | Msa0004060:intron | 30.0% | |
| !!! | GAAGAATCTGAGTGTTTTTT+TGG | - | chr1_1:6532390-6532409 | Msa0004060:intron | 30.0% |
| GCAAAAGTTGAAATACATGA+TGG | - | chr1_1:6532442-6532461 | Msa0004060:intron | 30.0% | |
| TTTCGATCAAAGTGGAAAAT+GGG | + | chr1_1:6532600-6532619 | Msa0004050:three_prime_UTR | 30.0% | |
| GAAGTTGGATCTAGTATTTA+CGG | + | chr1_1:6532695-6532714 | Msa0004050:three_prime_UTR | 30.0% | |
| TTCATATATATGGCAGCAAA+TGG | + | chr1_1:6532753-6532772 | Msa0004050:intron | 30.0% | |
| GTGTCTAATTTAACATACAG+CGG | - | chr1_1:6533051-6533070 | Msa0004060:intron | 30.0% | |
| CAGATAAAACTAAATGAGCA+AGG | + | chr1_1:6533199-6533218 | Msa0004050:intron | 30.0% | |
| ACTTGATGAATTCATTCTAG+CGG | - | chr1_1:6533238-6533257 | Msa0004060:intron | 30.0% | |
| CATAGGTACCTTATGATTTA+AGG | - | chr1_1:6533350-6533369 | Msa0004060:intron | 30.0% | |
| ! | AACACAAAACAGGTTAGTTA+AGG | + | chr1_1:6533488-6533507 | Msa0004050:intron | 30.0% |
| ! | ATGGAAGTGTACATAATACA+TGG | + | chr1_1:6533675-6533694 | Msa0004050:intron | 30.0% |
| ATGTATTATGTACACTTCCA+TGG | - | chr1_1:6533674-6533693 | Msa0004060:intron | 30.0% | |
| TTGTAGACATTCAGAAAGTT+GGG | - | chr1_1:6533721-6533740 | Msa0004060:intron | 30.0% | |
| GAACACACAGATAATGAAAA+AGG | + | chr1_1:6533759-6533778 | Msa0004050:intron | 30.0% | |
| !!! | CTTGCTCATTTCACTTTTTA+AGG | - | chr1_1:6533876-6533895 | Msa0004060:intron | 30.0% |
| ATCTTATTACACCAGTACTT+TGG | - | chr1_1:6533930-6533949 | Msa0004060:CDS | 30.0% | |
| CCTACATCACAAGAAATATT+TGG | + | chr1_1:6534068-6534087 | Msa0004050:intron | 30.0% | |
| CCAAATATTTCTTGTGATGT+AGG | - | chr1_1:6534065-6534084 | Msa0004060:intron | 30.0% | |
| AGAAATGACTATTCTGCAAT+GGG | + | chr1_1:6534125-6534144 | Msa0004050:intron | 30.0% | |
| AAGAAATGACTATTCTGCAA+TGG | + | chr1_1:6534126-6534145 | Msa0004050:intron | 30.0% | |
| AACACGATCCAATCCAAAAA+GGG | + | chr1_1:6530621-6530640 | Msa0004050:CDS | 35.0% | |
| AAACACGATCCAATCCAAAA+AGG | + | chr1_1:6530622-6530641 | Msa0004050:CDS | 35.0% | |
| TGTTCTGCAACAGAATGAAT+CGG | + | chr1_1:6530660-6530679 | Msa0004050:CDS | 35.0% | |
| ACACTAATTTCGTTGAGGTA+TGG | - | chr1_1:6530788-6530807 | Msa0004060:three_prime_UTR | 35.0% | |
| CGACAATTTATCCCACTAAA+TGG | + | chr1_1:6530945-6530964 | Msa0004050:three_prime_UTR | 35.0% | |
| TTTGTTCTCTAACTCCTAGA+AGG | + | chr1_1:6530978-6530997 | Msa0004050:three_prime_UTR | 35.0% | |
| AAAGTTAGGGACTAATTTGG+TGG | - | chr1_1:6531056-6531075 | Msa0004060:three_prime_UTR | 35.0% | |
| !! | ACTTTAGGATCTTTCTAGGT+TGG | - | chr1_1:6531401-6531420 | Msa0004060:intron | 35.0% |
| AAGGTCTAAGAAGGCAAAAA+AGG | + | chr1_1:6531481-6531500 | Msa0004050:intron | 35.0% | |
| TTAGACCTTACTGTTGTCAT+TGG | - | chr1_1:6531492-6531511 | Msa0004060:intron | 35.0% | |
| ATAAAGGACATTCAAGGTCT+TGG | + | chr1_1:6531522-6531541 | Msa0004050:intron | 35.0% | |
| CAATTAACTAGGACCTTTCA+AGG | + | chr1_1:6531599-6531618 | Msa0004050:intron | 35.0% | |
| CTTGAAAGGTCCTAGTTAAT+TGG | - | chr1_1:6531597-6531616 | Msa0004060:intron | 35.0% | |
| ! | AAATCTATCCGTGAAGCTTT+TGG | - | chr1_1:6531624-6531643 | Msa0004060:intron | 35.0% |
| ! | AATCTATCCGTGAAGCTTTT+GGG | - | chr1_1:6531625-6531644 | Msa0004060:intron | 35.0% |
| ATTTCATCCCAAAAGCTTCA+CGG | + | chr1_1:6531635-6531654 | Msa0004050:intron | 35.0% | |
| TGATGGGAAAATCAAACATG+AGG | + | chr1_1:6531754-6531773 | Msa0004050:intron | 35.0% | |
| !!! | AGCATTCTGCTGTTTTAAAG+TGG | - | chr1_1:6531831-6531850 | Msa0004060:intron | 35.0% |
| GTACACACAAGGTAATATAC+CGG | - | chr1_1:6531941-6531960 | Msa0004060:intron | 35.0% | |
| ! | TGACATCACTGATAATGAGT+TGG | - | chr1_1:6531996-6532015 | Msa0004060:intron | 35.0% |
| CTCGGAAATCGAGATAAATT+AGG | - | chr1_1:6532302-6532321 | Msa0004060:intron | 35.0% | |
| GTGGAATATAAAAGGGTAGA+TGG | - | chr1_1:6532345-6532364 | Msa0004060:intron | 35.0% | |
| TAGACTCACTATTCAACTGT+AGG | - | chr1_1:6532529-6532548 | Msa0004060:intron | 35.0% | |
| TTCGATCAAAGTGGAAAATG+GGG | + | chr1_1:6532599-6532618 | Msa0004050:three_prime_UTR | 35.0% | |
| CTTTCGATCAAAGTGGAAAA+TGG | + | chr1_1:6532601-6532620 | Msa0004050:three_prime_UTR | 35.0% | |
| ! | CGGAATCAAATTTTCCTGTA+AGG | + | chr1_1:6532782-6532801 | Msa0004050:intron | 35.0% |
| !! | AAGGTTGCTTTGGATCTTTT+GGG | + | chr1_1:6532902-6532921 | Msa0004050:intron | 35.0% |
| !! | TAAGGTTGCTTTGGATCTTT+TGG | + | chr1_1:6532903-6532922 | Msa0004050:intron | 35.0% |
| AAGTGAGAATAAGGTTGCTT+TGG | + | chr1_1:6532912-6532931 | Msa0004050:intron | 35.0% | |
| TGCTCAATTAGAAACTCAAC+AGG | + | chr1_1:6533007-6533026 | Msa0004050:intron | 35.0% | |
| CAGCAATCACAAACTTCATT+TGG | + | chr1_1:6533130-6533149 | Msa0004050:intron | 35.0% | |
| AATGAAGTTTGTGATTGCTG+AGG | - | chr1_1:6533130-6533149 | Msa0004060:intron | 35.0% | |
| ATGAAGTTTGTGATTGCTGA+GGG | - | chr1_1:6533131-6533150 | Msa0004060:intron | 35.0% | |
| CTTGATGAATTCATTCTAGC+GGG | - | chr1_1:6533239-6533258 | Msa0004060:intron | 35.0% | |
| ! | GACATGTGATTGCTAGTTTA+AGG | - | chr1_1:6533318-6533337 | Msa0004060:intron | 35.0% |
| CAGTTAGGCCTTAAATCATA+AGG | + | chr1_1:6533361-6533380 | Msa0004050:intron | 35.0% | |
| TCGATTTCCTTTGCTTCTTT+GGG | - | chr1_1:6533381-6533400 | Msa0004060:intron | 35.0% | |
| ! | ACAGGTTAGTTAAGGAATTG+TGG | + | chr1_1:6533480-6533499 | Msa0004050:intron | 35.0% |
| CAGGCTATCATTGAAAGAAT+GGG | - | chr1_1:6533510-6533529 | Msa0004060:intron | 35.0% | |
| AGGCTATCATTGAAAGAATG+GGG | - | chr1_1:6533511-6533530 | Msa0004060:intron | 35.0% | |
| GTACATAATACATGGCTCAA+GGG | + | chr1_1:6533667-6533686 | Msa0004050:intron | 35.0% | |
| TGTACATAATACATGGCTCA+AGG | + | chr1_1:6533668-6533687 | Msa0004050:intron | 35.0% | |
| ACACGAGATTTAAGAAACCA+TGG | + | chr1_1:6533694-6533713 | Msa0004050:intron | 35.0% | |
| GTTGTAGACATTCAGAAAGT+TGG | - | chr1_1:6533720-6533739 | Msa0004060:intron | 35.0% | |
| TGTAGACATTCAGAAAGTTG+GGG | - | chr1_1:6533722-6533741 | Msa0004060:intron | 35.0% | |
| ! | CTAACTACAAAGAAGCACAA+TGG | + | chr1_1:6533794-6533813 | Msa0004050:intron | 35.0% |
| TCCAACGATTGAAGTAATCT+TGG | - | chr1_1:6534040-6534059 | Msa0004060:intron | 35.0% | |
| TCCAAGATTACTTCAATCGT+TGG | + | chr1_1:6534044-6534063 | Msa0004050:intron | 35.0% | |
| GGTATGAGGAAAGATGATTT+GGG | - | chr1_1:6534088-6534107 | Msa0004060:intron | 35.0% | |
| GTATGAGGAAAGATGATTTG+GGG | - | chr1_1:6534089-6534108 | Msa0004060:intron | 35.0% | |
| ! | TATGAGGAAAGATGATTTGG+GGG | - | chr1_1:6534090-6534109 | Msa0004060:intron | 35.0% |
| TTTCTTCCACTTTGCCAATT+AGG | - | chr1_1:6534140-6534159 | Msa0004060:intron | 35.0% | |
| AAGAATCCTAATTGGCAAAG+TGG | + | chr1_1:6534149-6534168 | Msa0004050:three_prime_UTR | 35.0% | |
| ACTTTGCCAATTAGGATTCT+TGG | - | chr1_1:6534148-6534167 | Msa0004060:five_prime_UTR | 35.0% | |
| !! | ACAAGAGCACCAAAAATTGT+GGG | + | chr1_1:6534228-6534247 | Msa0004050:three_prime_UTR | 35.0% |
| !! | AACAAGAGCACCAAAAATTG+TGG | + | chr1_1:6534229-6534248 | Msa0004050:three_prime_UTR | 35.0% |
| ACACGATCCAATCCAAAAAG+GGG | + | chr1_1:6530620-6530639 | Msa0004050:CDS | 40.0% | |
| ATTCTGTTGCAGAACAGACA+GGG | - | chr1_1:6530664-6530683 | Msa0004060:three_prime_UTR | 40.0% | |
| TGTTTCTCGGAATCTTCAAG+AGG | + | chr1_1:6530718-6530737 | Msa0004050:exon | 40.0% | |
| TGAAGATTCCGAGAAACACA+AGG | - | chr1_1:6530720-6530739 | Msa0004060:three_prime_UTR | 40.0% | |
| GTATTCGACCTTGTGTTTCT+CGG | + | chr1_1:6530731-6530750 | Msa0004050:exon | 40.0% | |
| TGGGATCTCTATTTACGACA+AGG | + | chr1_1:6530765-6530784 | Msa0004050:three_prime_UTR | 40.0% | |
| GGTTTACGATTCTATGGCAA+TGG | - | chr1_1:6531313-6531332 | Msa0004060:intron | 40.0% | |
| ! | AGAGCTAAATCACGTTTTGC+TGG | - | chr1_1:6531437-6531456 | Msa0004060:CDS | 40.0% |
| GACAACAGTAAGGTCTAAGA+AGG | + | chr1_1:6531490-6531509 | Msa0004050:intron | 40.0% | |
| GATCTCCAATGACAACAGTA+AGG | + | chr1_1:6531500-6531519 | Msa0004050:intron | 40.0% | |
| ! | GGAAGCATAAAGGACATTCA+AGG | + | chr1_1:6531528-6531547 | Msa0004050:intron | 40.0% |
| ! | GACATAGGAAGCATAACCAA+GGG | + | chr1_1:6531552-6531571 | Msa0004050:intron | 40.0% |
| ! | AGGGTATTTGATGAGGACAT+AGG | + | chr1_1:6531567-6531586 | Msa0004050:intron | 40.0% |
| GATGCACGGTTACTAAACAA+CGG | + | chr1_1:6531705-6531724 | Msa0004050:intron | 40.0% | |
| TGGGAGAAAAAACTGATGCA+CGG | + | chr1_1:6531719-6531738 | Msa0004050:intron | 40.0% | |
| CATGAGGAAGCAAAAGAGAT+GGG | + | chr1_1:6531738-6531757 | Msa0004050:intron | 40.0% | |
| ACATGAGGAAGCAAAAGAGA+TGG | + | chr1_1:6531739-6531758 | Msa0004050:intron | 40.0% | |
| GTAATATACCGGAGATATGC+TGG | - | chr1_1:6531952-6531971 | Msa0004060:intron | 40.0% | |
| AAAACAGTCCAGCATATCTC+CGG | + | chr1_1:6531963-6531982 | Msa0004050:intron | 40.0% | |
| CAATGTCTGCGAACTTGATT+TGG | - | chr1_1:6532071-6532090 | Msa0004060:intron | 40.0% | |
| GGGGTCAGAATTAGAATTAG+CGG | - | chr1_1:6532480-6532499 | Msa0004060:intron | 40.0% | |
| GGGTCAGAATTAGAATTAGC+GGG | - | chr1_1:6532481-6532500 | Msa0004060:intron | 40.0% | |
| GGTCAGAATTAGAATTAGCG+GGG | - | chr1_1:6532482-6532501 | Msa0004060:intron | 40.0% | |
| CTAGGTCTTCTACAAGAAGT+TGG | + | chr1_1:6532710-6532729 | Msa0004050:three_prime_UTR | 40.0% | |
| AACAAGGCTTGTGTTGAAGA+CGG | + | chr1_1:6532802-6532821 | Msa0004050:intron | 40.0% | |
| !! | AGGTTGCTTTGGATCTTTTG+GGG | + | chr1_1:6532901-6532920 | Msa0004050:intron | 40.0% |
| CGTAGTGAACAGTAAGACTT+AGG | + | chr1_1:6533092-6533111 | Msa0004050:intron | 40.0% | |
| ACTGCAAGAAACAAGCAAGA+AGG | - | chr1_1:6533265-6533284 | Msa0004060:intron | 40.0% | |
| AGCAAAGGAAATCGACAGTT+AGG | + | chr1_1:6533376-6533395 | Msa0004050:intron | 40.0% | |
| ! | GTCGATTTCCTTTGCTTCTT+TGG | - | chr1_1:6533380-6533399 | Msa0004060:intron | 40.0% |
| AAATGTGCCCAAAGAAGCAA+AGG | + | chr1_1:6533391-6533410 | Msa0004050:intron | 40.0% | |
| TTCTCTGCTTACGACAATTG+CGG | - | chr1_1:6533409-6533428 | Msa0004060:intron | 40.0% | |
| ! | CTAACCTGTTTTGTGTTTGC+AGG | - | chr1_1:6533491-6533510 | Msa0004060:intron | 40.0% |
| ATAGCCTGCAAACACAAAAC+AGG | + | chr1_1:6533498-6533517 | Msa0004050:intron | 40.0% | |
| GCAGGCTATCATTGAAAGAA+TGG | - | chr1_1:6533509-6533528 | Msa0004060:intron | 40.0% | |
| GGCTATCATTGAAAGAATGG+GGG | - | chr1_1:6533512-6533531 | Msa0004060:intron | 40.0% | |
| ATAATACATGGCTCAAGGGT+GGG | + | chr1_1:6533663-6533682 | Msa0004050:intron | 40.0% | |
| TGTATCACTCATTGTGAGAC+GGG | + | chr1_1:6533856-6533875 | Msa0004050:intron | 40.0% | |
| GTGTATCACTCATTGTGAGA+CGG | + | chr1_1:6533857-6533876 | Msa0004050:intron | 40.0% | |
| AAGATCTTGCCCATTTGTCT+TGG | - | chr1_1:6533991-6534010 | Msa0004060:CDS | 40.0% | |
| GGGTATGAGGAAAGATGATT+TGG | - | chr1_1:6534087-6534106 | Msa0004060:intron | 40.0% | |
| ! | ATGAGGAAAGATGATTTGGG+GGG | - | chr1_1:6534091-6534110 | Msa0004060:intron | 40.0% |
| AGTGGACCAAGAATCCTAAT+TGG | + | chr1_1:6534157-6534176 | Msa0004050:three_prime_UTR | 40.0% | |
| !! | AAGAGCACCAAAAATTGTGG+GGG | + | chr1_1:6534226-6534245 | Msa0004050:three_prime_UTR | 40.0% |
| !! | CAAGAGCACCAAAAATTGTG+GGG | + | chr1_1:6534227-6534246 | Msa0004050:three_prime_UTR | 40.0% |
| CATTCTGTTGCAGAACAGAC+AGG | - | chr1_1:6530663-6530682 | Msa0004060:three_prime_UTR | 45.0% | |
| GAAACACAAGGTCGAATACG+AGG | - | chr1_1:6530732-6530751 | Msa0004060:three_prime_UTR | 45.0% | |
| ACTAAATGGGGTCAGCTACA+TGG | + | chr1_1:6530931-6530950 | Msa0004050:three_prime_UTR | 45.0% | |
| ATGTAGCTGACCCCATTTAG+TGG | - | chr1_1:6530930-6530949 | Msa0004060:three_prime_UTR | 45.0% | |
| TGTAGCTGACCCCATTTAGT+GGG | - | chr1_1:6530931-6530950 | Msa0004060:three_prime_UTR | 45.0% | |
| GTCGTTGTTGTAGTCCTTCT+AGG | - | chr1_1:6530961-6530980 | Msa0004060:three_prime_UTR | 45.0% | |
| ! | ACTTTGTAGGGCACTCTCAA+AGG | + | chr1_1:6531041-6531060 | Msa0004050:three_prime_UTR | 45.0% |
| !! | TGAGAGTGCCCTACAAAGTT+AGG | - | chr1_1:6531042-6531061 | Msa0004060:three_prime_UTR | 45.0% |
| !! | GAGAGTGCCCTACAAAGTTA+GGG | - | chr1_1:6531043-6531062 | Msa0004060:three_prime_UTR | 45.0% |
| ! | AACCAAGGGAGGAAGCATAA+AGG | + | chr1_1:6531538-6531557 | Msa0004050:intron | 45.0% |
| ! | ATAGGAAGCATAACCAAGGG+AGG | + | chr1_1:6531549-6531568 | Msa0004050:intron | 45.0% |
| ! | GGACATAGGAAGCATAACCA+AGG | + | chr1_1:6531553-6531572 | Msa0004050:intron | 45.0% |
| AGGACCTTTCAAGGAAAACG+CGG | + | chr1_1:6531590-6531609 | Msa0004050:intron | 45.0% | |
| GTTGCAGTTTCGTACACACA+AGG | - | chr1_1:6531930-6531949 | Msa0004060:intron | 45.0% | |
| TAAAAGGGTAGATGGATGGG+TGG | - | chr1_1:6532353-6532372 | Msa0004060:intron | 45.0% | |
| TGGATGGGTGGATATGGAAT+AGG | - | chr1_1:6532365-6532384 | Msa0004060:intron | 45.0% | |
| GGATGGGTGGATATGGAATA+GGG | - | chr1_1:6532366-6532385 | Msa0004060:intron | 45.0% | |
| TGATGGCACAAAAAGAGCTG+AGG | - | chr1_1:6532459-6532478 | Msa0004060:intron | 45.0% | |
| GATGGCACAAAAAGAGCTGA+GGG | - | chr1_1:6532460-6532479 | Msa0004060:intron | 45.0% | |
| ATGGCACAAAAAGAGCTGAG+GGG | - | chr1_1:6532461-6532480 | Msa0004060:intron | 45.0% | |
| CAAAGTGGAAAATGGGGCAA+AGG | + | chr1_1:6532593-6532612 | Msa0004050:three_prime_UTR | 45.0% | |
| !! | GATGCTGCTTTCGATCAAAG+TGG | + | chr1_1:6532608-6532627 | Msa0004050:three_prime_UTR | 45.0% |
| ACTGCAGCGAAGTGAGAATA+AGG | + | chr1_1:6532921-6532940 | Msa0004050:intron | 45.0% | |
| AGTTTGTGATTGCTGAGGGT+TGG | - | chr1_1:6533135-6533154 | Msa0004060:intron | 45.0% | |
| GTTTGTGATTGCTGAGGGTT+GGG | - | chr1_1:6533136-6533155 | Msa0004060:intron | 45.0% | |
| ! | GTTTAAGGCTTGAGCTGCAT+AGG | - | chr1_1:6533333-6533352 | Msa0004060:intron | 45.0% |
| ATTTCAGCAGAGTCACGACA+GGG | - | chr1_1:6533563-6533582 | Msa0004060:intron | 45.0% | |
| CATAATACATGGCTCAAGGG+TGG | + | chr1_1:6533664-6533683 | Msa0004050:intron | 45.0% | |
| TATCACTCATTGTGAGACGG+GGG | + | chr1_1:6533854-6533873 | Msa0004050:intron | 45.0% | |
| GTATCACTCATTGTGAGACG+GGG | + | chr1_1:6533855-6533874 | Msa0004050:intron | 45.0% | |
| AGGGACAGATTCCAAAGTAC+TGG | + | chr1_1:6533944-6533963 | Msa0004050:three_prime_UTR | 45.0% | |
| TCTTGCCCATTTGTCTTGGA+TGG | - | chr1_1:6533995-6534014 | Msa0004060:CDS | 45.0% | |
| CTTGCCCATTTGTCTTGGAT+GGG | - | chr1_1:6533996-6534015 | Msa0004060:CDS | 45.0% | |
| TTGCCCATTTGTCTTGGATG+GGG | - | chr1_1:6533997-6534016 | Msa0004060:CDS | 45.0% | |
| TTCCCCCATCCAAGACAAAT+GGG | + | chr1_1:6534003-6534022 | Msa0004050:three_prime_UTR | 45.0% | |
| TTTCCCCCATCCAAGACAAA+TGG | + | chr1_1:6534004-6534023 | Msa0004050:three_prime_UTR | 45.0% | |
| ! | TCTTGTGATGTAGGGGTATG+AGG | - | chr1_1:6534074-6534093 | Msa0004060:intron | 45.0% |
| ! | GTTGCATCCCCCACAATTTT+TGG | - | chr1_1:6534216-6534235 | Msa0004060:five_prime_UTR | 45.0% |
| !! | TGATTTAATATATTATAAAT+TGG | - | chr1_1:6532506-6532525 | Msa0004060:intron | 5.0% |
| GGAGTACGACGACGTTATTG+TGG | + | chr1_1:6530458-6530477 | Msa0004050:CDS | 50.0% | |
| GGGTCAGCTACATGGATCAA+AGG | + | chr1_1:6530923-6530942 | Msa0004050:three_prime_UTR | 50.0% | |
| GTCCTTTATGCTTCCTCCCT+TGG | - | chr1_1:6531533-6531552 | Msa0004060:intron | 50.0% | |
| !! | AACGCGGAGGGTATTTGATG+AGG | + | chr1_1:6531574-6531593 | Msa0004050:intron | 50.0% |
| CCTTTCAAGGAAAACGCGGA+GGG | + | chr1_1:6531586-6531605 | Msa0004050:intron | 50.0% | |
| ACCTTTCAAGGAAAACGCGG+AGG | + | chr1_1:6531587-6531606 | Msa0004050:intron | 50.0% | |
| GGTAGATGGATGGGTGGATA+TGG | - | chr1_1:6532359-6532378 | Msa0004060:intron | 50.0% | |
| ! | TGGAGTGCCACATCAGAAGA+TGG | - | chr1_1:6532410-6532429 | Msa0004060:intron | 50.0% |
| GTGCCACATCAGAAGATGGT+CGG | - | chr1_1:6532414-6532433 | Msa0004060:intron | 50.0% | |
| CAACCGACCATCTTCTGATG+TGG | + | chr1_1:6532420-6532439 | Msa0004050:intron | 50.0% | |
| CATCAGAAGATGGTCGGTTG+TGG | - | chr1_1:6532420-6532439 | Msa0004060:intron | 50.0% | |
| CATTTCAGCAGAGTCACGAC+AGG | - | chr1_1:6533562-6533581 | Msa0004060:intron | 50.0% | |
| TGCCCATTTGTCTTGGATGG+GGG | - | chr1_1:6533998-6534017 | Msa0004060:CDS | 50.0% | |
| ! | AAGATGATTTGGGGGGCACA+TGG | - | chr1_1:6534098-6534117 | Msa0004060:intron | 50.0% |
| TGCAACAAGCAGCTCAAGCT+AGG | + | chr1_1:6534202-6534221 | Msa0004050:three_prime_UTR | 50.0% | |
| ! | CCCTCCGCGTTTTCCTTGAA+AGG | - | chr1_1:6531583-6531602 | Msa0004060:intron | 55.0% |
| GTGATTGCTGAGGGTTGGGT+TGG | - | chr1_1:6533140-6533159 | Msa0004060:intron | 55.0% | |
| !! | TGCTGAGGGTTGGGTTGGAG+TGG | - | chr1_1:6533145-6533164 | Msa0004060:intron | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1_1 | gene | 6530425 | 6534282 | 6530425 | ID=Msa0004060;Name=Msa0004060 |
| chr1_1 | mRNA | 6530425 | 6534282 | 6530425 | ID=Msa0004060-mRNA-1;Parent=Msa0004060;Name=Msa0004060-mRNA-1;_AED=0.07;_eAED=0.07;_QI=135|1|1|1|1|1|5|728|142 |
| chr1_1 | exon | 6530425 | 6531194 | 6530425 | ID=Msa0004060-mRNA-1:exon:2212;Parent=Msa0004060-mRNA-1 |
| chr1_1 | exon | 6531421 | 6531480 | 6531421 | ID=Msa0004060-mRNA-1:exon:2211;Parent=Msa0004060-mRNA-1 |
| chr1_1 | exon | 6532597 | 6532770 | 6532597 | ID=Msa0004060-mRNA-1:exon:2210;Parent=Msa0004060-mRNA-1 |
| chr1_1 | exon | 6533903 | 6534052 | 6533903 | ID=Msa0004060-mRNA-1:exon:2209;Parent=Msa0004060-mRNA-1 |
| chr1_1 | exon | 6534145 | 6534282 | 6534145 | ID=Msa0004060-mRNA-1:exon:2208;Parent=Msa0004060-mRNA-1 |
| chr1_1 | five_prime_UTR | 6534148 | 6534282 | 6534148 | ID=Msa0004060-mRNA-1:five_prime_utr;Parent=Msa0004060-mRNA-1 |
| chr1_1 | CDS | 6534145 | 6534147 | 6534145 | ID=Msa0004060-mRNA-1:cds;Parent=Msa0004060-mRNA-1 |
| chr1_1 | CDS | 6533903 | 6534052 | 6533903 | ID=Msa0004060-mRNA-1:cds;Parent=Msa0004060-mRNA-1 |
| chr1_1 | CDS | 6532597 | 6532770 | 6532597 | ID=Msa0004060-mRNA-1:cds;Parent=Msa0004060-mRNA-1 |
| chr1_1 | CDS | 6531421 | 6531480 | 6531421 | ID=Msa0004060-mRNA-1:cds;Parent=Msa0004060-mRNA-1 |
| chr1_1 | CDS | 6531153 | 6531194 | 6531153 | ID=Msa0004060-mRNA-1:cds;Parent=Msa0004060-mRNA-1 |
| chr1_1 | three_prime_UTR | 6530425 | 6531152 | 6530425 | ID=Msa0004060-mRNA-1:three_prime_utr;Parent=Msa0004060-mRNA-1 |
| Gene Sequence |
| Protein sequence |
