Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1127130 | XP_003625863.1 | 95.312 | 192 | 9 | 0 | 1 | 192 | 1 | 192 | 2.72e-109 | 320 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1127130 | G7KQY9 | 95.312 | 192 | 9 | 0 | 1 | 192 | 1 | 192 | 1.30e-109 | 320 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0002490 | Msa1127130 | 0.819170 | 1.336785e-52 | -8.615850e-47 |
| Msa0004060 | Msa1127130 | 0.835453 | 1.663562e-56 | -8.615850e-47 |
| Msa0006880 | Msa1127130 | 0.832618 | 8.529487e-56 | -8.615850e-47 |
| Msa0015140 | Msa1127130 | 0.813000 | 3.194079e-51 | -8.615850e-47 |
| Msa0018620 | Msa1127130 | 0.803185 | 3.932881e-49 | -8.615850e-47 |
| Msa0032260 | Msa1127130 | 0.821714 | 3.486025e-53 | -8.615850e-47 |
| Msa0037160 | Msa1127130 | 0.804446 | 2.152002e-49 | -8.615850e-47 |
| Msa0040690 | Msa1127130 | 0.811455 | 6.943340e-51 | -8.615850e-47 |
| Msa0044020 | Msa1127130 | 0.814164 | 1.771325e-51 | -8.615850e-47 |
| Msa0045490 | Msa1127130 | 0.821805 | 3.321655e-53 | -8.615850e-47 |
| Msa0046760 | Msa1127130 | 0.805565 | 1.255677e-49 | -8.615850e-47 |
| Msa0047160 | Msa1127130 | 0.810059 | 1.391485e-50 | -8.615850e-47 |
| Msa0055150 | Msa1127130 | 0.843603 | 1.266096e-58 | -8.615850e-47 |
| Msa0057140 | Msa1127130 | 0.831793 | 1.364814e-55 | -8.615850e-47 |
| Msa0076000 | Msa1127130 | 0.828142 | 1.059626e-54 | -8.615850e-47 |
| Msa0094470 | Msa1127130 | 0.807568 | 4.743954e-50 | -8.615850e-47 |
| Msa0097600 | Msa1127130 | 0.823785 | 1.148722e-53 | -8.615850e-47 |
| Msa0097950 | Msa1127130 | 0.824766 | 6.755015e-54 | -8.615850e-47 |
| Msa0097990 | Msa1127130 | 0.826710 | 2.336775e-54 | -8.615850e-47 |
| Msa0098740 | Msa1127130 | 0.812217 | 4.738639e-51 | -8.615850e-47 |
| Msa0100800 | Msa1127130 | 0.813885 | 2.040994e-51 | -8.615850e-47 |
| Msa0104610 | Msa1127130 | 0.826564 | 2.531186e-54 | -8.615850e-47 |
| Msa0603670 | Msa1127130 | 0.816877 | 4.409507e-52 | -8.615850e-47 |
| Msa0612390 | Msa1127130 | 0.813068 | 3.086261e-51 | -8.615850e-47 |
| Msa0615440 | Msa1127130 | 0.834348 | 3.156713e-56 | -8.615850e-47 |
| Msa0619070 | Msa1127130 | 0.810862 | 9.334584e-51 | -8.615850e-47 |
| Msa0623700 | Msa1127130 | 0.805874 | 1.080975e-49 | -8.615850e-47 |
| Msa0626680 | Msa1127130 | 0.806923 | 6.496504e-50 | -8.615850e-47 |
| Msa0641140 | Msa1127130 | 0.862661 | 4.325689e-64 | -8.615850e-47 |
| Msa0647930 | Msa1127130 | 0.806697 | 7.253376e-50 | -8.615850e-47 |
| Msa0651150 | Msa1127130 | 0.804034 | 2.621261e-49 | -8.615850e-47 |
| Msa0652300 | Msa1127130 | 0.835440 | 1.676417e-56 | -8.615850e-47 |
| Msa0656580 | Msa1127130 | 0.825783 | 3.882677e-54 | -8.615850e-47 |
| Msa0664760 | Msa1127130 | 0.807385 | 5.186052e-50 | -8.615850e-47 |
| Msa0679680 | Msa1127130 | 0.835904 | 1.278970e-56 | -8.615850e-47 |
| Msa0682900 | Msa1127130 | 0.806168 | 9.375472e-50 | -8.615850e-47 |
| Msa0691450 | Msa1127130 | 0.806046 | 9.946030e-50 | -8.615850e-47 |
| Msa0691900 | Msa1127130 | 0.807251 | 5.537511e-50 | -8.615850e-47 |
| Msa0694840 | Msa1127130 | 0.815163 | 1.064194e-51 | -8.615850e-47 |
| Msa0698060 | Msa1127130 | 0.836255 | 1.041858e-56 | -8.615850e-47 |
| Msa0698490 | Msa1127130 | 0.832032 | 1.191634e-55 | -8.615850e-47 |
| Msa0698660 | Msa1127130 | 0.836844 | 7.374416e-57 | -8.615850e-47 |
| Msa0703230 | Msa1127130 | 0.819449 | 1.154580e-52 | -8.615850e-47 |
| Msa0704660 | Msa1127130 | 0.806269 | 8.927530e-50 | -8.615850e-47 |
| Msa0708520 | Msa1127130 | 0.807408 | 5.129044e-50 | -8.615850e-47 |
| Msa0744030 | Msa1127130 | 0.807957 | 3.921673e-50 | -8.615850e-47 |
| Msa0744090 | Msa1127130 | 0.807721 | 4.400552e-50 | -8.615850e-47 |
| Msa0750920 | Msa1127130 | 0.812115 | 4.986537e-51 | -8.615850e-47 |
| Msa0754720 | Msa1127130 | -0.813687 | 2.256399e-51 | -8.615850e-47 |
| Msa0796530 | Msa1127130 | 0.811269 | 7.618705e-51 | -8.615850e-47 |
| Msa0803630 | Msa1127130 | 0.812582 | 3.942937e-51 | -8.615850e-47 |
| Msa0819060 | Msa1127130 | 0.836217 | 1.064972e-56 | -8.615850e-47 |
| Msa0825270 | Msa1127130 | 0.801134 | 1.039164e-48 | -8.615850e-47 |
| Msa0825280 | Msa1127130 | 0.805797 | 1.122257e-49 | -8.615850e-47 |
| Msa0830390 | Msa1127130 | 0.838752 | 2.385287e-57 | -8.615850e-47 |
| Msa0830540 | Msa1127130 | 0.803373 | 3.596508e-49 | -8.615850e-47 |
| Msa0127310 | Msa1127130 | 0.821396 | 4.128087e-53 | -8.615850e-47 |
| Msa0131450 | Msa1127130 | 0.811368 | 7.249414e-51 | -8.615850e-47 |
| Msa0133630 | Msa1127130 | 0.808551 | 2.930007e-50 | -8.615850e-47 |
| Msa0135420 | Msa1127130 | 0.802196 | 6.292566e-49 | -8.615850e-47 |
| Msa0136380 | Msa1127130 | 0.815902 | 7.285240e-52 | -8.615850e-47 |
| Msa0141340 | Msa1127130 | 0.829949 | 3.865147e-55 | -8.615850e-47 |
| Msa0142950 | Msa1127130 | 0.803562 | 3.285669e-49 | -8.615850e-47 |
| Msa0156230 | Msa1127130 | 0.806330 | 8.666837e-50 | -8.615850e-47 |
| Msa0165440 | Msa1127130 | 0.805390 | 1.366019e-49 | -8.615850e-47 |
| Msa0177210 | Msa1127130 | 0.812405 | 4.310969e-51 | -8.615850e-47 |
| Msa0185590 | Msa1127130 | 0.800275 | 1.555444e-48 | -8.615850e-47 |
| Msa0186890 | Msa1127130 | 0.819220 | 1.302382e-52 | -8.615850e-47 |
| Msa0187930 | Msa1127130 | 0.811359 | 7.283147e-51 | -8.615850e-47 |
| Msa0194540 | Msa1127130 | 0.815434 | 9.263363e-52 | -8.615850e-47 |
| Msa0198520 | Msa1127130 | 0.858191 | 9.758802e-63 | -8.615850e-47 |
| Msa0198530 | Msa1127130 | 0.855904 | 4.613908e-62 | -8.615850e-47 |
| Msa0211860 | Msa1127130 | 0.813386 | 2.627853e-51 | -8.615850e-47 |
| Msa0224030 | Msa1127130 | 0.800484 | 1.410433e-48 | -8.615850e-47 |
| Msa0226470 | Msa1127130 | 0.839799 | 1.276624e-57 | -8.615850e-47 |
| Msa0227400 | Msa1127130 | 0.874165 | 8.360226e-68 | -8.615850e-47 |
| Msa0231660 | Msa1127130 | 0.811864 | 5.654743e-51 | -8.615850e-47 |
| Msa0231880 | Msa1127130 | 0.819499 | 1.124609e-52 | -8.615850e-47 |
| Msa0402330 | Msa1127130 | 0.825984 | 3.479610e-54 | -8.615850e-47 |
| Msa0414170 | Msa1127130 | 0.807131 | 5.870125e-50 | -8.615850e-47 |
| Msa0415810 | Msa1127130 | 0.804366 | 2.236124e-49 | -8.615850e-47 |
| Msa0419520 | Msa1127130 | 0.811433 | 7.018087e-51 | -8.615850e-47 |
| Msa0428170 | Msa1127130 | 0.811417 | 7.075783e-51 | -8.615850e-47 |
| Msa0460930 | Msa1127130 | 0.824182 | 9.272334e-54 | -8.615850e-47 |
| Msa0465550 | Msa1127130 | 0.804002 | 2.662682e-49 | -8.615850e-47 |
| Msa0474590 | Msa1127130 | 0.815685 | 8.144668e-52 | -8.615850e-47 |
| Msa0474700 | Msa1127130 | 0.802688 | 4.982044e-49 | -8.615850e-47 |
| Msa0980940 | Msa1127130 | 0.807083 | 6.010659e-50 | -8.615850e-47 |
| Msa0981430 | Msa1127130 | 0.802019 | 6.843407e-49 | -8.615850e-47 |
| Msa0997430 | Msa1127130 | 0.813089 | 3.053068e-51 | -8.615850e-47 |
| Msa1001350 | Msa1127130 | 0.815265 | 1.010206e-51 | -8.615850e-47 |
| Msa1006840 | Msa1127130 | 0.822303 | 2.545464e-53 | -8.615850e-47 |
| Msa1013400 | Msa1127130 | 0.806708 | 7.215638e-50 | -8.615850e-47 |
| Msa1014420 | Msa1127130 | 0.827551 | 1.470091e-54 | -8.615850e-47 |
| Msa1040800 | Msa1127130 | 0.811953 | 5.410178e-51 | -8.615850e-47 |
| Msa1040840 | Msa1127130 | 0.826957 | 2.040073e-54 | -8.615850e-47 |
| Msa1040890 | Msa1127130 | 0.836372 | 9.728719e-57 | -8.615850e-47 |
| Msa1041210 | Msa1127130 | 0.813793 | 2.137865e-51 | -8.615850e-47 |
| Msa1041520 | Msa1127130 | 0.928761 | 1.826515e-92 | -8.615850e-47 |
| Msa1055410 | Msa1127130 | 0.834848 | 2.364241e-56 | -8.615850e-47 |
| Msa1058760 | Msa1127130 | 0.801270 | 9.746083e-49 | -8.615850e-47 |
| Msa1081150 | Msa1127130 | 0.812665 | 3.782411e-51 | -8.615850e-47 |
| Msa1081560 | Msa1127130 | 0.964512 | 2.021612e-123 | -8.615850e-47 |
| Msa1083210 | Msa1127130 | 0.842482 | 2.517468e-58 | -8.615850e-47 |
| Msa1083750 | Msa1127130 | 0.804208 | 2.411842e-49 | -8.615850e-47 |
| Msa1089840 | Msa1127130 | 0.807694 | 4.459231e-50 | -8.615850e-47 |
| Msa1093330 | Msa1127130 | 0.862828 | 3.842967e-64 | -8.615850e-47 |
| Msa1104140 | Msa1127130 | 0.821511 | 3.883254e-53 | -8.615850e-47 |
| Msa0239450 | Msa1127130 | 0.832888 | 7.308422e-56 | -8.615850e-47 |
| Msa0239940 | Msa1127130 | 0.802832 | 4.653377e-49 | -8.615850e-47 |
| Msa0244780 | Msa1127130 | 0.800300 | 1.537212e-48 | -8.615850e-47 |
| Msa0259270 | Msa1127130 | 0.814836 | 1.257747e-51 | -8.615850e-47 |
| Msa0264570 | Msa1127130 | 0.809858 | 1.537475e-50 | -8.615850e-47 |
| Msa0268130 | Msa1127130 | 0.806289 | 8.841211e-50 | -8.615850e-47 |
| Msa0278790 | Msa1127130 | 0.825051 | 5.788250e-54 | -8.615850e-47 |
| Msa0288730 | Msa1127130 | 0.813867 | 2.059430e-51 | -8.615850e-47 |
| Msa0291520 | Msa1127130 | 0.818377 | 2.023390e-52 | -8.615850e-47 |
| Msa0318720 | Msa1127130 | 0.819801 | 9.595675e-53 | -8.615850e-47 |
| Msa0355270 | Msa1127130 | 0.822077 | 2.872140e-53 | -8.615850e-47 |
| Msa0363620 | Msa1127130 | 0.818876 | 1.559301e-52 | -8.615850e-47 |
| Msa1112390 | Msa1127130 | 0.812914 | 3.335157e-51 | -8.615850e-47 |
| Msa1118940 | Msa1127130 | 0.803705 | 3.068559e-49 | -8.615850e-47 |
| Msa1126450 | Msa1127130 | 0.805542 | 1.269342e-49 | -8.615850e-47 |
| Msa1126770 | Msa1127130 | 0.808055 | 3.737713e-50 | -8.615850e-47 |
| Msa1127130 | Msa1127830 | 0.818803 | 1.620034e-52 | -8.615850e-47 |
| Msa1127130 | Msa1127890 | 0.822069 | 2.884523e-53 | -8.615850e-47 |
| Msa1127130 | Msa1128660 | 0.801116 | 1.048139e-48 | -8.615850e-47 |
| Msa1127130 | Msa1130670 | -0.803725 | 3.039147e-49 | -8.615850e-47 |
| Msa1127130 | Msa1133400 | 0.819772 | 9.744368e-53 | -8.615850e-47 |
| Msa1127130 | Msa1145240 | 0.816526 | 5.285474e-52 | -8.615850e-47 |
| Msa1127130 | Msa1166410 | 0.964487 | 2.173977e-123 | -8.615850e-47 |
| Msa1127130 | Msa1174100 | 0.828821 | 7.262424e-55 | -8.615850e-47 |
| Msa1127130 | Msa1179950 | 0.805351 | 1.392252e-49 | -8.615850e-47 |
| Msa1127130 | Msa1179980 | 0.803945 | 2.736399e-49 | -8.615850e-47 |
| Msa1127130 | Msa1187840 | 0.807295 | 5.420224e-50 | -8.615850e-47 |
| Msa1127130 | Msa1202150 | 0.817014 | 4.106320e-52 | -8.615850e-47 |
| Msa1127130 | Msa1206160 | 0.803985 | 2.684443e-49 | -8.615850e-47 |
| Msa1127130 | Msa1207270 | 0.809788 | 1.591118e-50 | -8.615850e-47 |
| Msa1127130 | Msa1218600 | 0.815808 | 7.644911e-52 | -8.615850e-47 |
| Msa1127130 | Msa1227690 | 0.806145 | 9.483948e-50 | -8.615850e-47 |
| Msa1127130 | Msa1231240 | 0.801729 | 7.846860e-49 | -8.615850e-47 |
| Msa1127130 | Msa1237940 | 0.804953 | 1.686767e-49 | -8.615850e-47 |
| Msa1127130 | Msa1254710 | 0.836993 | 6.754550e-57 | -8.615850e-47 |
| Msa1127130 | Msa1255040 | -0.837106 | 6.321496e-57 | -8.615850e-47 |
| Msa1127130 | Msa1257510 | 0.806784 | 6.953983e-50 | -8.615850e-47 |
| Msa1127130 | Msa1265630 | 0.809652 | 1.702495e-50 | -8.615850e-47 |
| Msa1127130 | Msa1269300 | 0.808270 | 3.363439e-50 | -8.615850e-47 |
| Msa1127130 | Msa1270620 | 0.801364 | 9.322124e-49 | -8.615850e-47 |
| Msa1127130 | Msa1282240 | 0.834518 | 2.862221e-56 | -8.615850e-47 |
| Msa1127130 | Msa1283170 | 0.803980 | 2.690893e-49 | -8.615850e-47 |
| Msa1127130 | Msa1292830 | 0.803237 | 3.836312e-49 | -8.615850e-47 |
| Msa1127130 | Msa1294840 | 0.801118 | 1.047203e-48 | -8.615850e-47 |
| Msa1127130 | Msa1294960 | 0.816666 | 4.915435e-52 | -8.615850e-47 |
| Msa1127130 | Msa1306990 | 0.805221 | 1.481876e-49 | -8.615850e-47 |
| Msa1127130 | Msa1307950 | 0.806476 | 8.075908e-50 | -8.615850e-47 |
| Msa1127130 | Msa1311960 | 0.828974 | 6.671323e-55 | -8.615850e-47 |
| Msa1127130 | Msa1355700 | 0.835934 | 1.256956e-56 | -8.615850e-47 |
| Msa1127130 | Msa1356440 | 0.814645 | 1.386385e-51 | -8.615850e-47 |
| Msa1127130 | Msa1363330 | 0.804354 | 2.249340e-49 | -8.615850e-47 |
| Msa1127130 | Msa1365860 | 0.800479 | 1.413770e-48 | -8.615850e-47 |
| Msa1127130 | Msa1366600 | 0.811379 | 7.209801e-51 | -8.615850e-47 |
| Msa1127130 | Msa1370620 | 0.810951 | 8.926777e-51 | -8.615850e-47 |
| Msa1127130 | Msa1371640 | 0.801792 | 7.618027e-49 | -8.615850e-47 |
| Msa1127130 | Msa1374120 | 0.812317 | 4.506389e-51 | -8.615850e-47 |
| Msa1127130 | Msa1376170 | 0.801908 | 7.209716e-49 | -8.615850e-47 |
| Msa1127130 | Msa1376200 | 0.826233 | 3.036138e-54 | -8.615850e-47 |
| Msa1127130 | Msa1386600 | 0.804721 | 1.885189e-49 | -8.615850e-47 |
| Msa1127130 | Msa1389680 | 0.809862 | 1.533927e-50 | -8.615850e-47 |
| Msa1127130 | Msa1390230 | 0.820284 | 7.440587e-53 | -8.615850e-47 |
| Msa1127130 | Msa1394290 | 0.812627 | 3.855596e-51 | -8.615850e-47 |
| Msa1127130 | Msa1397810 | 0.810512 | 1.111116e-50 | -8.615850e-47 |
| Msa1127130 | Msa1410760 | -0.811810 | 5.810367e-51 | -8.615850e-47 |
| Msa1127130 | Msa1415940 | 0.804389 | 2.211604e-49 | -8.615850e-47 |
| Msa1127130 | Msa1427060 | 0.802018 | 6.845447e-49 | -8.615850e-47 |
| Msa1127130 | Msa1442850 | 0.820608 | 6.269996e-53 | -8.615850e-47 |
| Msa1127130 | Msa1444310 | 0.804379 | 2.222477e-49 | -8.615850e-47 |
| Msa1127130 | Msa1452480 | 0.816604 | 5.075166e-52 | -8.615850e-47 |
| Msa1127130 | Msa1466090 | 0.819453 | 1.152471e-52 | -8.615850e-47 |
| Msa0484840 | Msa1127130 | 0.814960 | 1.180786e-51 | -8.615850e-47 |
| Msa0505770 | Msa1127130 | 0.805668 | 1.194689e-49 | -8.615850e-47 |
| Msa0514180 | Msa1127130 | 0.808116 | 3.626771e-50 | -8.615850e-47 |
| Msa0526540 | Msa1127130 | 0.804783 | 1.830071e-49 | -8.615850e-47 |
| Msa0526890 | Msa1127130 | 0.821271 | 4.411336e-53 | -8.615850e-47 |
| Msa0541860 | Msa1127130 | 0.818006 | 2.455478e-52 | -8.615850e-47 |
| Msa0542160 | Msa1127130 | 0.847600 | 1.043724e-59 | -8.615850e-47 |
| Msa0545060 | Msa1127130 | 0.861653 | 8.821286e-64 | -8.615850e-47 |
| Msa0547360 | Msa1127130 | 0.804183 | 2.441496e-49 | -8.615850e-47 |
| Msa0556790 | Msa1127130 | 0.821661 | 3.585608e-53 | -8.615850e-47 |
| Msa0556860 | Msa1127130 | 0.812291 | 4.565258e-51 | -8.615850e-47 |
| Msa0557070 | Msa1127130 | 0.803198 | 3.908401e-49 | -8.615850e-47 |
| Msa0558810 | Msa1127130 | 0.835630 | 1.500844e-56 | -8.615850e-47 |
| Msa0558840 | Msa1127130 | 0.813752 | 2.183150e-51 | -8.615850e-47 |
| Msa0568820 | Msa1127130 | 0.804825 | 1.793561e-49 | -8.615850e-47 |
| Msa0576940 | Msa1127130 | 0.804004 | 2.659473e-49 | -8.615850e-47 |
| Msa0586850 | Msa1127130 | 0.822188 | 2.706963e-53 | -8.615850e-47 |
| Msa0600600 | Msa1127130 | 0.861830 | 7.788849e-64 | -8.615850e-47 |
| Msa0849200 | Msa1127130 | 0.849569 | 2.971866e-60 | -8.615850e-47 |
| Msa0850710 | Msa1127130 | 0.804258 | 2.354570e-49 | -8.615850e-47 |
| Msa0859180 | Msa1127130 | 0.800960 | 1.127951e-48 | -8.615850e-47 |
| Msa0863370 | Msa1127130 | 0.803922 | 2.766582e-49 | -8.615850e-47 |
| Msa0876200 | Msa1127130 | 0.812641 | 3.827879e-51 | -8.615850e-47 |
| Msa0881580 | Msa1127130 | 0.808577 | 2.893221e-50 | -8.615850e-47 |
| Msa0901450 | Msa1127130 | 0.809010 | 2.337679e-50 | -8.615850e-47 |
| Msa0902760 | Msa1127130 | 0.801550 | 8.539842e-49 | -8.615850e-47 |
| Msa0906690 | Msa1127130 | 0.807178 | 5.738374e-50 | -8.615850e-47 |
| Msa0925770 | Msa1127130 | 0.813754 | 2.181032e-51 | -8.615850e-47 |
| Msa0970030 | Msa1127130 | 0.811442 | 6.987332e-51 | -8.615850e-47 |
| Msa0972590 | Msa1127130 | 0.811344 | 7.337403e-51 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1127130 | MtrunA17_Chr7g0268661 | 95.312 | 192 | 9 | 0 | 1 | 192 | 1 | 192 | 2.50e-113 | 320 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1127130 | AT4G03180.1 | 51.872 | 187 | 71 | 4 | 9 | 189 | 7 | 180 | 7.36e-44 | 144 |
| Msa1127130 | AT4G03180.2 | 48.571 | 140 | 56 | 2 | 55 | 189 | 7 | 135 | 3.06e-25 | 95.9 |
Find 42 sgRNAs with CRISPR-Local
Find 260 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AAAATTCAGATGAAAATAAA+TGG | 0.194245 | 7_3:+78629268 | None:intergenic |
| TCAATTCTGTATTTCATAAT+AGG | 0.220883 | 7_3:+78629380 | None:intergenic |
| ATACAGAATTGAACATCTTT+TGG | 0.235696 | 7_3:-78629369 | Msa1127130:CDS |
| GTATCCACTGTTATTGGATT+TGG | 0.245614 | 7_3:+78632621 | None:intergenic |
| TGGATTGTATCCACTGTTAT+TGG | 0.269806 | 7_3:+78632615 | None:intergenic |
| ATCAAACCTCAATATGTCTT+TGG | 0.273402 | 7_3:+78629880 | None:intergenic |
| TGACGATGAAGAAGAATAAA+AGG | 0.287215 | 7_3:-78632699 | Msa1127130:CDS |
| GTAATGACCGGTATAAATTA+AGG | 0.324259 | 7_3:+78629188 | None:intergenic |
| AGGAGGAACGTTTCGAGGTT+AGG | 0.383195 | 7_3:-78632679 | Msa1127130:CDS |
| CAAATCCTGATTAGTGGACT+AGG | 0.387821 | 7_3:-78629321 | Msa1127130:exon |
| ATGTTGATGTTATCTGCATT+TGG | 0.396332 | 7_3:+78629292 | None:intergenic |
| TCTTCCCTAGTCCACTAATC+AGG | 0.411099 | 7_3:+78629316 | None:intergenic |
| TCAAACCTCAATATGTCTTT+GGG | 0.414773 | 7_3:+78629881 | None:intergenic |
| ACTTTCTTAATTATTGTCAA+TGG | 0.420017 | 7_3:-78629228 | Msa1127130:three_prime_UTR |
| TGAGAGGAGGAGAAGGAAGA+AGG | 0.463593 | 7_3:-78629573 | Msa1127130:CDS |
| ATTTGTTGCTAGCTGAGCCT+TGG | 0.469979 | 7_3:+78629339 | None:intergenic |
| GGAGAGGGAAGCAGTATTCA+AGG | 0.482087 | 7_3:-78629486 | Msa1127130:CDS |
| TAGCAACAAATCCTGATTAG+TGG | 0.483204 | 7_3:-78629327 | Msa1127130:exon |
| AGACTGAGGGATCATTCTGC+TGG | 0.487070 | 7_3:+78629904 | None:intergenic |
| ATAAGAATGAGAGGAGGAGA+AGG | 0.495494 | 7_3:-78629580 | Msa1127130:CDS |
| AAATTCAGATGAAAATAAAT+GGG | 0.495648 | 7_3:+78629269 | None:intergenic |
| AACGAGGTTCAGAGCAATTG+AGG | 0.500409 | 7_3:+78632793 | None:intergenic |
| AGTCTCCCAAAGACATATTG+AGG | 0.501893 | 7_3:-78629886 | Msa1127130:intron |
| ATAAAAGGAGGAACGTTTCG+AGG | 0.510507 | 7_3:-78632684 | Msa1127130:CDS |
| AGCAGTATTCAAGGAAAAGA+AGG | 0.516229 | 7_3:-78629477 | Msa1127130:CDS |
| GTTTCGAGGTTAGGTGGAAG+TGG | 0.520904 | 7_3:-78632670 | Msa1127130:CDS |
| ATGTTTAAGAAGACACGAAA+AGG | 0.525206 | 7_3:-78629407 | Msa1127130:CDS |
| AATTGCATACTTATGAGAGA+TGG | 0.531431 | 7_3:+78632595 | None:intergenic |
| AGAGAAAGAAAGAATGGAGA+GGG | 0.531612 | 7_3:-78629501 | Msa1127130:CDS |
| AGGACAAGGATAAGAATGAG+AGG | 0.570238 | 7_3:-78629589 | Msa1127130:CDS |
| TAGCGAAAGCATTAAGTGAA+AGG | 0.574586 | 7_3:+78632647 | None:intergenic |
| AAATCCTGATTAGTGGACTA+GGG | 0.577402 | 7_3:-78629320 | Msa1127130:exon |
| AGGAACGTTTCGAGGTTAGG+TGG | 0.588198 | 7_3:-78632676 | Msa1127130:CDS |
| GAATTTGAATGAAACTGAAG+AGG | 0.591461 | 7_3:-78629609 | Msa1127130:CDS |
| ACAAGGATAAGAATGAGAGG+AGG | 0.593062 | 7_3:-78629586 | Msa1127130:CDS |
| AAGAGAAAGAAAGAATGGAG+AGG | 0.596634 | 7_3:-78629502 | Msa1127130:CDS |
| GAATGAAACTGAAGAGGACA+AGG | 0.598466 | 7_3:-78629603 | Msa1127130:CDS |
| ATATGTCTTTGGGAGACTGA+GGG | 0.609227 | 7_3:+78629891 | None:intergenic |
| AATATGTCTTTGGGAGACTG+AGG | 0.627209 | 7_3:+78629890 | None:intergenic |
| AATGCCAAATCCAATAACAG+TGG | 0.654269 | 7_3:-78632625 | Msa1127130:CDS |
| CGATGAAGAAGAATAAAAGG+AGG | 0.667747 | 7_3:-78632696 | Msa1127130:CDS |
| TGTTGGAAGATTAATTAACG+AGG | 0.700815 | 7_3:+78632777 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | CAAAAATAATCAAAATAATA+TGG | + | chr7_3:78629577-78629596 | None:intergenic | 10.0% |
| !! | TTATATATTTAAAAACATGA+TGG | + | chr7_3:78629692-78629711 | None:intergenic | 10.0% |
| !!! | TTTTTAAATATATAAGCAAT+TGG | - | chr7_3:78629697-78629716 | Msa1127130:intron | 10.0% |
| !! | AAAAATTTGATGAATAATTT+GGG | + | chr7_3:78630438-78630457 | None:intergenic | 10.0% |
| !! | TAAAAATTTGATGAATAATT+TGG | + | chr7_3:78630439-78630458 | None:intergenic | 10.0% |
| !!! | TTTTGTAAATGTATATTTTT+AGG | - | chr7_3:78630497-78630516 | Msa1127130:intron | 10.0% |
| !!! | TATTTTGATTATTTTTGTGA+TGG | - | chr7_3:78629580-78629599 | Msa1127130:CDS | 15.0% |
| !!! | TTTAAAACTACTAAGATTAT+TGG | - | chr7_3:78630532-78630551 | Msa1127130:intron | 15.0% |
| !! | AAAAAAAAAAATACTTCTCA+TGG | + | chr7_3:78631116-78631135 | None:intergenic | 15.0% |
| !!! | TTTTTTTAAAAAAGAAGGAA+GGG | + | chr7_3:78631578-78631597 | None:intergenic | 15.0% |
| !!! | TTTTTTTTAAAAAAGAAGGA+AGG | + | chr7_3:78631579-78631598 | None:intergenic | 15.0% |
| !! | TAAAAAAAAAAAATCCAATG+AGG | - | chr7_3:78631590-78631609 | Msa1127130:intron | 15.0% |
| !!! | ATTATCTTCATTGAATATTT+TGG | - | chr7_3:78631682-78631701 | Msa1127130:intron | 15.0% |
| !! | AAATTCAGATGAAAATAAAT+GGG | + | chr7_3:78632742-78632761 | None:intergenic | 15.0% |
| !! | AAAATTCAGATGAAAATAAA+TGG | + | chr7_3:78632743-78632762 | None:intergenic | 15.0% |
| !! | GAAAAATAGATCTAGAAATA+GGG | - | chr7_3:78629912-78629931 | Msa1127130:CDS | 20.0% |
| !!! | TGAAATTAGGTTTTTTCATT+GGG | - | chr7_3:78630076-78630095 | Msa1127130:intron | 20.0% |
| !!! | ATTATAATTTGTTGTGAAAG+GGG | + | chr7_3:78630184-78630203 | None:intergenic | 20.0% |
| !!! | GATTATAATTTGTTGTGAAA+GGG | + | chr7_3:78630185-78630204 | None:intergenic | 20.0% |
| !!! | AGATTATAATTTGTTGTGAA+AGG | + | chr7_3:78630186-78630205 | None:intergenic | 20.0% |
| !! | ATTAATTGGTACACTATTAT+GGG | + | chr7_3:78630211-78630230 | None:intergenic | 20.0% |
| !! | TATTAATTGGTACACTATTA+TGG | + | chr7_3:78630212-78630231 | None:intergenic | 20.0% |
| !! | GTTAATGTACCTAAATATAT+TGG | - | chr7_3:78630627-78630646 | Msa1127130:intron | 20.0% |
| !!! | TGGTGCTTTTTAATTTAAAA+TGG | + | chr7_3:78631152-78631171 | None:intergenic | 20.0% |
| !! | ATGAACCTTTAAATGAATTA+GGG | - | chr7_3:78631335-78631354 | Msa1127130:intron | 20.0% |
| !! | TTTAGATGATTATTTGGTTA+TGG | - | chr7_3:78631450-78631469 | Msa1127130:intron | 20.0% |
| !! | ACAAAAAAACTTCTTTCATT+TGG | - | chr7_3:78631765-78631784 | Msa1127130:intron | 20.0% |
| !! | TAATGTTCGAAAATCTTAAA+TGG | + | chr7_3:78631873-78631892 | None:intergenic | 20.0% |
| !!! | CATCACTTTTAATATGATTT+GGG | - | chr7_3:78631913-78631932 | Msa1127130:intron | 20.0% |
| !! | GACATATTAAAATATAGCAA+TGG | + | chr7_3:78631973-78631992 | None:intergenic | 20.0% |
| !! | TAGTAATAATAACAATCTCA+AGG | + | chr7_3:78632171-78632190 | None:intergenic | 20.0% |
| !!! | TTGTTATTATTACTATCTAC+AGG | - | chr7_3:78632176-78632195 | Msa1127130:intron | 20.0% |
| !! | AATTTGAATTCCATAAATAG+CGG | + | chr7_3:78632253-78632272 | None:intergenic | 20.0% |
| !! | TCAATTCTGTATTTCATAAT+AGG | + | chr7_3:78632631-78632650 | None:intergenic | 20.0% |
| !! | ACTTTCTTAATTATTGTCAA+TGG | - | chr7_3:78632780-78632799 | Msa1127130:five_prime_UTR | 20.0% |
| !!! | TTTTGAACCTTAATTTATAC+CGG | - | chr7_3:78632813-78632832 | Msa1127130:five_prime_UTR | 20.0% |
| !!! | TCATTATTTTTCGTCATTGT+TGG | + | chr7_3:78629251-78629270 | None:intergenic | 25.0% |
| !! | TCAGCATCTTTCATAATTTT+TGG | - | chr7_3:78629447-78629466 | Msa1127130:CDS | 25.0% |
| ! | ATTATGTTACTCTGTGTTAA+GGG | + | chr7_3:78629761-78629780 | None:intergenic | 25.0% |
| ! | AATTATGTTACTCTGTGTTA+AGG | + | chr7_3:78629762-78629781 | None:intergenic | 25.0% |
| !!! | TCTATTTTTCCAGATTTTCT+GGG | + | chr7_3:78629902-78629921 | None:intergenic | 25.0% |
| !!! | ATCTATTTTTCCAGATTTTC+TGG | + | chr7_3:78629903-78629922 | None:intergenic | 25.0% |
| ! | GGAAAAATAGATCTAGAAAT+AGG | - | chr7_3:78629911-78629930 | Msa1127130:CDS | 25.0% |
| !!! | GACTTCTAATTTCTGAAATT+AGG | - | chr7_3:78630063-78630082 | Msa1127130:intron | 25.0% |
| !!! | CTGAAATTAGGTTTTTTCAT+TGG | - | chr7_3:78630075-78630094 | Msa1127130:intron | 25.0% |
| ! | AATACAAATAGTCCAAACAA+AGG | + | chr7_3:78630128-78630147 | None:intergenic | 25.0% |
| !!! | TTTTTTTGTTCCACCTTTTT+GGG | - | chr7_3:78630388-78630407 | Msa1127130:intron | 25.0% |
| !! | ATTATTGGTCTAAATGTGAA+GGG | - | chr7_3:78630547-78630566 | Msa1127130:intron | 25.0% |
| ! | AAAGAAAAAAGAATGGAAGT+AGG | - | chr7_3:78630997-78631016 | Msa1127130:intron | 25.0% |
| ! | TAACATTAAGCTACATAGTT+TGG | - | chr7_3:78631070-78631089 | Msa1127130:intron | 25.0% |
| ! | CATGAACCTTTAAATGAATT+AGG | - | chr7_3:78631334-78631353 | Msa1127130:intron | 25.0% |
| ! | AAGAACCCTAATTCATTTAA+AGG | + | chr7_3:78631343-78631362 | None:intergenic | 25.0% |
| !! | CTTTGGTAAAGTTTTACTAT+TGG | - | chr7_3:78631628-78631647 | Msa1127130:intron | 25.0% |
| !!! | ATTTTGAAAAAAACAACGCA+AGG | + | chr7_3:78631727-78631746 | None:intergenic | 25.0% |
| ! | TCTTCAGAACAAATTACAAT+TGG | + | chr7_3:78631797-78631816 | None:intergenic | 25.0% |
| ! | ATGGTATATATTCAGAATCA+GGG | + | chr7_3:78631896-78631915 | None:intergenic | 25.0% |
| ! | CCAAATCATATTAAAAGTGA+TGG | + | chr7_3:78631915-78631934 | None:intergenic | 25.0% |
| !!! | CCATCACTTTTAATATGATT+TGG | - | chr7_3:78631912-78631931 | Msa1127130:intron | 25.0% |
| !!! | GCTATATTTTAATATGTCAG+TGG | - | chr7_3:78631975-78631994 | Msa1127130:intron | 25.0% |
| !! | AAATTTCTCTTTTATGACAC+AGG | + | chr7_3:78632279-78632298 | None:intergenic | 25.0% |
| ! | AGTAAACATCAATCAATGTT+AGG | + | chr7_3:78632337-78632356 | None:intergenic | 25.0% |
| ! | AGAAAAAGAGAAAGAAAGAA+TGG | - | chr7_3:78632501-78632520 | Msa1127130:intron | 25.0% |
| !! | ATACAGAATTGAACATCTTT+TGG | - | chr7_3:78632639-78632658 | Msa1127130:CDS | 25.0% |
| TGTTGGAAGATTAATTAACG+AGG | + | chr7_3:78629234-78629253 | None:intergenic | 30.0% | |
| TGACGATGAAGAAGAATAAA+AGG | - | chr7_3:78629309-78629328 | Msa1127130:three_prime_UTR | 30.0% | |
| AATTGCATACTTATGAGAGA+TGG | + | chr7_3:78629416-78629435 | None:intergenic | 30.0% | |
| TATTGCTGCAATTTAATGCT+TGG | - | chr7_3:78629531-78629550 | Msa1127130:CDS | 30.0% | |
| ATTGCTGCAATTTAATGCTT+GGG | - | chr7_3:78629532-78629551 | Msa1127130:CDS | 30.0% | |
| !!! | GATTATTTTTGTGATGGATG+AGG | - | chr7_3:78629586-78629605 | Msa1127130:CDS | 30.0% |
| ! | CTTTTCTTCTGCTCATATTT+GGG | + | chr7_3:78629635-78629654 | None:intergenic | 30.0% |
| !! | CTATTTTTCCAGATTTTCTG+GGG | + | chr7_3:78629901-78629920 | None:intergenic | 30.0% |
| ! | TTCTGAAAGTCATGATGAAA+AGG | - | chr7_3:78629945-78629964 | Msa1127130:CDS | 30.0% |
| !!! | CTTTTTTTGTTCCACCTTTT+TGG | - | chr7_3:78630387-78630406 | Msa1127130:intron | 30.0% |
| GTAAAAAAGATTGCCCAAAA+AGG | + | chr7_3:78630404-78630423 | None:intergenic | 30.0% | |
| TGATGAATAATTTGGGAAAG+AGG | + | chr7_3:78630431-78630450 | None:intergenic | 30.0% | |
| ! | GATTATTGGTCTAAATGTGA+AGG | - | chr7_3:78630546-78630565 | Msa1127130:intron | 30.0% |
| ACATTAACCATGTTGGATTT+GGG | + | chr7_3:78630615-78630634 | None:intergenic | 30.0% | |
| TACATTAACCATGTTGGATT+TGG | + | chr7_3:78630616-78630635 | None:intergenic | 30.0% | |
| TTTAGGTACATTAACCATGT+TGG | + | chr7_3:78630622-78630641 | None:intergenic | 30.0% | |
| AGGACAATAACTATATACCA+TGG | + | chr7_3:78630686-78630705 | None:intergenic | 30.0% | |
| AGATGTTGGAAGAAAATGAA+AGG | + | chr7_3:78630709-78630728 | None:intergenic | 30.0% | |
| CAAAGAAACAAAAGCAGAAA+GGG | + | chr7_3:78630736-78630755 | None:intergenic | 30.0% | |
| ACAAAGAAACAAAAGCAGAA+AGG | + | chr7_3:78630737-78630756 | None:intergenic | 30.0% | |
| ATTATGCTAAAATCGTAGTG+AGG | - | chr7_3:78630807-78630826 | Msa1127130:intron | 30.0% | |
| TTATGCTAAAATCGTAGTGA+GGG | - | chr7_3:78630808-78630827 | Msa1127130:intron | 30.0% | |
| TAGAACCTAAATGAGTCTTA+CGG | + | chr7_3:78630844-78630863 | None:intergenic | 30.0% | |
| GTTCTATTACAATTCATACC+TGG | - | chr7_3:78630858-78630877 | Msa1127130:intron | 30.0% | |
| TACCTGGCATTTAAAAACAT+TGG | - | chr7_3:78630874-78630893 | Msa1127130:intron | 30.0% | |
| GGGATTCAAAGAAAAAAGAA+TGG | - | chr7_3:78630990-78631009 | Msa1127130:intron | 30.0% | |
| !! | AAATTAAAAAGCACCAAGCA+CGG | - | chr7_3:78631156-78631175 | Msa1127130:intron | 30.0% |
| TTAGTCATAGAAGTTGTCTA+CGG | + | chr7_3:78631209-78631228 | None:intergenic | 30.0% | |
| GTTTGTGTTAATCATGTCTA+TGG | - | chr7_3:78631381-78631400 | Msa1127130:intron | 30.0% | |
| GTGCTCTTTAGATGATTATT+TGG | - | chr7_3:78631444-78631463 | Msa1127130:intron | 30.0% | |
| ACTATACTTATTTGCCTCAT+TGG | + | chr7_3:78631607-78631626 | None:intergenic | 30.0% | |
| GGCAAATAAGTATAGTACTT+TGG | - | chr7_3:78631611-78631630 | Msa1127130:intron | 30.0% | |
| GATGGTATATATTCAGAATC+AGG | + | chr7_3:78631897-78631916 | None:intergenic | 30.0% | |
| TCAAACCTCAATATGTCTTT+GGG | + | chr7_3:78632130-78632149 | None:intergenic | 30.0% | |
| ATCAAACCTCAATATGTCTT+TGG | + | chr7_3:78632131-78632150 | None:intergenic | 30.0% | |
| ! | TTTTGTGTTACCGCTATTTA+TGG | - | chr7_3:78632240-78632259 | Msa1127130:intron | 30.0% |
| GAATTTGAATGAAACTGAAG+AGG | - | chr7_3:78632399-78632418 | Msa1127130:intron | 30.0% | |
| ATGTTTAAGAAGACACGAAA+AGG | - | chr7_3:78632601-78632620 | Msa1127130:intron | 30.0% | |
| ATGTTGATGTTATCTGCATT+TGG | + | chr7_3:78632719-78632738 | None:intergenic | 30.0% | |
| CGATGAAGAAGAATAAAAGG+AGG | - | chr7_3:78629312-78629331 | Msa1127130:three_prime_UTR | 35.0% | |
| !! | TAGCGAAAGCATTAAGTGAA+AGG | + | chr7_3:78629364-78629383 | None:intergenic | 35.0% |
| AATGCCAAATCCAATAACAG+TGG | - | chr7_3:78629383-78629402 | Msa1127130:CDS | 35.0% | |
| GTATCCACTGTTATTGGATT+TGG | + | chr7_3:78629390-78629409 | None:intergenic | 35.0% | |
| TGGATTGTATCCACTGTTAT+TGG | + | chr7_3:78629396-78629415 | None:intergenic | 35.0% | |
| GCTCATATTTGGGTATGTAA+GGG | + | chr7_3:78629625-78629644 | None:intergenic | 35.0% | |
| TGCTCATATTTGGGTATGTA+AGG | + | chr7_3:78629626-78629645 | None:intergenic | 35.0% | |
| ! | GCTTTTCTTCTGCTCATATT+TGG | + | chr7_3:78629636-78629655 | None:intergenic | 35.0% |
| AATATGAGCAGAAGAAAAGC+TGG | - | chr7_3:78629636-78629655 | Msa1127130:intron | 35.0% | |
| ATATGAGCAGAAGAAAAGCT+GGG | - | chr7_3:78629637-78629656 | Msa1127130:intron | 35.0% | |
| CACAGAGTAACATAATTCGT+TGG | - | chr7_3:78629765-78629784 | Msa1127130:intron | 35.0% | |
| !! | ACATAATTCGTTGGTTCCAT+TGG | - | chr7_3:78629774-78629793 | Msa1127130:intron | 35.0% |
| TGAAAGTCATGATGAAAAGG+AGG | - | chr7_3:78629948-78629967 | Msa1127130:CDS | 35.0% | |
| ! | AGCGATTTTGTATGAGAAGA+AGG | - | chr7_3:78629975-78629994 | Msa1127130:CDS | 35.0% |
| CAGAAGATAGATCTTGAATC+TGG | - | chr7_3:78630004-78630023 | Msa1127130:intron | 35.0% | |
| GATCTTGAATCTGGAAAAAG+AGG | - | chr7_3:78630013-78630032 | Msa1127130:intron | 35.0% | |
| TTGTGAAAGGGGATATGATT+AGG | + | chr7_3:78630173-78630192 | None:intergenic | 35.0% | |
| GTACGCGCTAATGTATTAAT+TGG | + | chr7_3:78630225-78630244 | None:intergenic | 35.0% | |
| AAAAAGATTGCCCAAAAAGG+TGG | + | chr7_3:78630401-78630420 | None:intergenic | 35.0% | |
| ! | AGCGAAGCACCAATATATTT+AGG | + | chr7_3:78630639-78630658 | None:intergenic | 35.0% |
| !! | GTTGGTAATTCTAGTTTCCA+TGG | - | chr7_3:78630666-78630685 | Msa1127130:intron | 35.0% |
| TGTTGGAAGAAAATGAAAGG+AGG | + | chr7_3:78630706-78630725 | None:intergenic | 35.0% | |
| ! | TTTGTTTCTTTGTCCAACGT+CGG | - | chr7_3:78630744-78630763 | Msa1127130:intron | 35.0% |
| ! | ATTGTTGCTTCGGCAAATTA+GGG | - | chr7_3:78630772-78630791 | Msa1127130:intron | 35.0% |
| TATGCTAAAATCGTAGTGAG+GGG | - | chr7_3:78630809-78630828 | Msa1127130:intron | 35.0% | |
| !! | AGCCAATGTTTTTAAATGCC+AGG | + | chr7_3:78630879-78630898 | None:intergenic | 35.0% |
| TGGTCAAGTCTCTATTTCAA+AGG | - | chr7_3:78630953-78630972 | Msa1127130:intron | 35.0% | |
| AGTCTCTATTTCAAAGGAGA+AGG | - | chr7_3:78630959-78630978 | Msa1127130:intron | 35.0% | |
| TCCTGATGATTTAGCTACTT+TGG | - | chr7_3:78631419-78631438 | Msa1127130:intron | 35.0% | |
| ! | CCTGATGATTTAGCTACTTT+GGG | - | chr7_3:78631420-78631439 | Msa1127130:intron | 35.0% |
| ! | CTGATGATTTAGCTACTTTG+GGG | - | chr7_3:78631421-78631440 | Msa1127130:intron | 35.0% |
| ! | TGATGATTTAGCTACTTTGG+GGG | - | chr7_3:78631422-78631441 | Msa1127130:intron | 35.0% |
| AAATCTTAAATGGTCGTGAG+AGG | + | chr7_3:78631863-78631882 | None:intergenic | 35.0% | |
| ! | TATGATTTGGGATGAGAATG+TGG | - | chr7_3:78631925-78631944 | Msa1127130:intron | 35.0% |
| AATGGAACTTCAGTTAGGTA+TGG | + | chr7_3:78631955-78631974 | None:intergenic | 35.0% | |
| ATAGCAATGGAACTTCAGTT+AGG | + | chr7_3:78631960-78631979 | None:intergenic | 35.0% | |
| !!! | TTTCTTTTTCAGAGAAGCAG+AGG | - | chr7_3:78632022-78632041 | Msa1127130:intron | 35.0% |
| !!! | TTCTTTTTCAGAGAAGCAGA+GGG | - | chr7_3:78632023-78632042 | Msa1127130:intron | 35.0% |
| ATCAGCATATCTGACGTATT+AGG | + | chr7_3:78632212-78632231 | None:intergenic | 35.0% | |
| TTTCAATGTTGATCTCTCTG+AGG | - | chr7_3:78632302-78632321 | Msa1127130:intron | 35.0% | |
| !! | GAAGGATAGTGCTTTTAGTT+TGG | - | chr7_3:78632453-78632472 | Msa1127130:intron | 35.0% |
| AAGAGAAAGAAAGAATGGAG+AGG | - | chr7_3:78632506-78632525 | Msa1127130:intron | 35.0% | |
| AGAGAAAGAAAGAATGGAGA+GGG | - | chr7_3:78632507-78632526 | Msa1127130:intron | 35.0% | |
| AGCAGTATTCAAGGAAAAGA+AGG | - | chr7_3:78632531-78632550 | Msa1127130:intron | 35.0% | |
| AAGCTCGCAGAAAAACTTTA+CGG | - | chr7_3:78632572-78632591 | Msa1127130:intron | 35.0% | |
| TAGCAACAAATCCTGATTAG+TGG | - | chr7_3:78632681-78632700 | Msa1127130:CDS | 35.0% | |
| !! | AAATCCTGATTAGTGGACTA+GGG | - | chr7_3:78632688-78632707 | Msa1127130:CDS | 35.0% |
| ATAAAAGGAGGAACGTTTCG+AGG | - | chr7_3:78629324-78629343 | Msa1127130:exon | 40.0% | |
| CTGCAATTTAATGCTTGGGT+TGG | - | chr7_3:78629536-78629555 | Msa1127130:CDS | 40.0% | |
| CAGAAGAAAAGCTGGGATAT+TGG | - | chr7_3:78629644-78629663 | Msa1127130:intron | 40.0% | |
| AGCTGGGATATTGGATAGAA+TGG | - | chr7_3:78629653-78629672 | Msa1127130:intron | 40.0% | |
| TGTTACTCTGTGTTAAGGGA+CGG | + | chr7_3:78629757-78629776 | None:intergenic | 40.0% | |
| TTTGTATGAGAAGAAGGCAG+AGG | - | chr7_3:78629981-78630000 | Msa1127130:intron | 40.0% | |
| ACAGTAAATGGGCCTTTGTT+TGG | - | chr7_3:78630113-78630132 | Msa1127130:intron | 40.0% | |
| ! | ACATAGTCGGTACGCTATTT+TGG | + | chr7_3:78630254-78630273 | None:intergenic | 40.0% |
| TACGCATCCTTCAAAGAATC+CGG | + | chr7_3:78630291-78630310 | None:intergenic | 40.0% | |
| ACATAATTCGTGGTTCGCTT+CGG | + | chr7_3:78630340-78630359 | None:intergenic | 40.0% | |
| ! | GTGCCTTAACATTTGTTGCT+CGG | - | chr7_3:78630364-78630383 | Msa1127130:intron | 40.0% |
| AAGCCGAGCAACAAATGTTA+AGG | + | chr7_3:78630370-78630389 | None:intergenic | 40.0% | |
| GAAGGGAGTCTAACAAGATA+CGG | - | chr7_3:78630564-78630583 | Msa1127130:intron | 40.0% | |
| ATACGGTAACACTCTTAGTG+TGG | - | chr7_3:78630581-78630600 | Msa1127130:intron | 40.0% | |
| TAGTGAACCCAAATCCAACA+TGG | - | chr7_3:78630605-78630624 | Msa1127130:intron | 40.0% | |
| ! | GTCGGTATTCATTGTTGCTT+CGG | - | chr7_3:78630762-78630781 | Msa1127130:intron | 40.0% |
| ! | CATTGTTGCTTCGGCAAATT+AGG | - | chr7_3:78630771-78630790 | Msa1127130:intron | 40.0% |
| TCAAAGGAGAAGGTAGATGT+TGG | - | chr7_3:78630969-78630988 | Msa1127130:intron | 40.0% | |
| CAAAGGAGAAGGTAGATGTT+GGG | - | chr7_3:78630970-78630989 | Msa1127130:intron | 40.0% | |
| AAAGAATGGAAGTAGGCCAT+AGG | - | chr7_3:78631004-78631023 | Msa1127130:intron | 40.0% | |
| AACATGCTTCATGCTTCCTA+TGG | + | chr7_3:78631023-78631042 | None:intergenic | 40.0% | |
| GATAAATACAGCGAATTCGC+TGG | + | chr7_3:78631237-78631256 | None:intergenic | 40.0% | |
| TAAAGGTTCATGTACTCGCA+AGG | + | chr7_3:78631326-78631345 | None:intergenic | 40.0% | |
| GGGTTCTTCTTTCCTTAGAT+TGG | - | chr7_3:78631355-78631374 | Msa1127130:intron | 40.0% | |
| AACACAAACTCGCCAATCTA+AGG | + | chr7_3:78631370-78631389 | None:intergenic | 40.0% | |
| TGTCTATGGAGAAGCTAACA+AGG | - | chr7_3:78631395-78631414 | Msa1127130:intron | 40.0% | |
| CCCAAAGTAGCTAAATCATC+AGG | + | chr7_3:78631423-78631442 | None:intergenic | 40.0% | |
| TATTTGGTTATGGAGCAGTC+TGG | - | chr7_3:78631460-78631479 | Msa1127130:intron | 40.0% | |
| AAGCAACGACTCTATGACAA+AGG | + | chr7_3:78631488-78631507 | None:intergenic | 40.0% | |
| TTACACGGAAACAACACTAG+GGG | + | chr7_3:78631533-78631552 | None:intergenic | 40.0% | |
| GTTACACGGAAACAACACTA+GGG | + | chr7_3:78631534-78631553 | None:intergenic | 40.0% | |
| AGTTACACGGAAACAACACT+AGG | + | chr7_3:78631535-78631554 | None:intergenic | 40.0% | |
| !!! | TCCGTGTAACTTTGTTTTCC+TGG | - | chr7_3:78631544-78631563 | Msa1127130:intron | 40.0% |
| CCCAGGAAAACAAAGTTACA+CGG | + | chr7_3:78631548-78631567 | None:intergenic | 40.0% | |
| !!! | CCGTGTAACTTTGTTTTCCT+GGG | - | chr7_3:78631545-78631564 | Msa1127130:intron | 40.0% |
| AAATCACGTGAGCTAACTAG+AGG | + | chr7_3:78631661-78631680 | None:intergenic | 40.0% | |
| ! | ATATGTCTTTGGGAGACTGA+GGG | + | chr7_3:78632120-78632139 | None:intergenic | 40.0% |
| ! | AATATGTCTTTGGGAGACTG+AGG | + | chr7_3:78632121-78632140 | None:intergenic | 40.0% |
| AGTCTCCCAAAGACATATTG+AGG | - | chr7_3:78632122-78632141 | Msa1127130:intron | 40.0% | |
| GCATATCTGACGTATTAGGT+AGG | + | chr7_3:78632208-78632227 | None:intergenic | 40.0% | |
| GAATGAAACTGAAGAGGACA+AGG | - | chr7_3:78632405-78632424 | Msa1127130:intron | 40.0% | |
| AGGACAAGGATAAGAATGAG+AGG | - | chr7_3:78632419-78632438 | Msa1127130:intron | 40.0% | |
| ACAAGGATAAGAATGAGAGG+AGG | - | chr7_3:78632422-78632441 | Msa1127130:intron | 40.0% | |
| ATAAGAATGAGAGGAGGAGA+AGG | - | chr7_3:78632428-78632447 | Msa1127130:intron | 40.0% | |
| AGCTCGCAGAAAAACTTTAC+GGG | - | chr7_3:78632573-78632592 | Msa1127130:intron | 40.0% | |
| !! | CATCTTTTGGAGACTATCCA+AGG | - | chr7_3:78632652-78632671 | Msa1127130:CDS | 40.0% |
| !! | CAAATCCTGATTAGTGGACT+AGG | - | chr7_3:78632687-78632706 | Msa1127130:CDS | 40.0% |
| AACGAGGTTCAGAGCAATTG+AGG | + | chr7_3:78629218-78629237 | None:intergenic | 45.0% | |
| ! | GCGAATTTTCACGCGAATTC+CGG | + | chr7_3:78629856-78629875 | None:intergenic | 45.0% |
| !! | CAGATTTTCTGGGGATACTC+CGG | + | chr7_3:78629892-78629911 | None:intergenic | 45.0% |
| !!! | AGGTTTTTTCATTGGGCCTC+TGG | - | chr7_3:78630083-78630102 | Msa1127130:intron | 45.0% |
| ATTTACTGTCCAGACTCCAG+AGG | + | chr7_3:78630102-78630121 | None:intergenic | 45.0% | |
| ! | TCTGGAGTCTGGACAGTAAA+TGG | - | chr7_3:78630101-78630120 | Msa1127130:intron | 45.0% |
| CTGGAGTCTGGACAGTAAAT+GGG | - | chr7_3:78630102-78630121 | Msa1127130:intron | 45.0% | |
| !!! | CGGTACGCTATTTTGGTTTG+CGG | + | chr7_3:78630247-78630266 | None:intergenic | 45.0% |
| TTCAAAGAATCCGGTACGTG+GGG | + | chr7_3:78630282-78630301 | None:intergenic | 45.0% | |
| CTTCAAAGAATCCGGTACGT+GGG | + | chr7_3:78630283-78630302 | None:intergenic | 45.0% | |
| AGGCACAGTCACATAATTCG+TGG | + | chr7_3:78630350-78630369 | None:intergenic | 45.0% | |
| GCAACAATGAATACCGACGT+TGG | + | chr7_3:78630760-78630779 | None:intergenic | 45.0% | |
| GCGATCCGTAAGACTCATTT+AGG | - | chr7_3:78630836-78630855 | Msa1127130:intron | 45.0% | |
| !! | CTGATTTGTTGCTGCATGGT+AGG | + | chr7_3:78630928-78630947 | None:intergenic | 45.0% |
| ACCATGCAGCAACAAATCAG+TGG | - | chr7_3:78630928-78630947 | Msa1127130:intron | 45.0% | |
| !! | ACCACTGATTTGTTGCTGCA+TGG | + | chr7_3:78630932-78630951 | None:intergenic | 45.0% |
| GCAGCAACAAATCAGTGGTT+TGG | - | chr7_3:78630933-78630952 | Msa1127130:intron | 45.0% | |
| !! | TTAAAAAGCACCAAGCACGG+TGG | - | chr7_3:78631159-78631178 | Msa1127130:intron | 45.0% |
| GGAACTTCAGTTAGGTATGG+CGG | + | chr7_3:78631952-78631971 | None:intergenic | 45.0% | |
| TTCTGCAACAGCAAGTAGAG+AGG | + | chr7_3:78632382-78632401 | None:intergenic | 45.0% | |
| ! | ATTTGTTGCTAGCTGAGCCT+TGG | + | chr7_3:78632672-78632691 | None:intergenic | 45.0% |
| TCTTCCCTAGTCCACTAATC+AGG | + | chr7_3:78632695-78632714 | None:intergenic | 45.0% | |
| !!! | TTTTTTTTTTTTAAAAAAGA+AGG | + | chr7_3:78631583-78631602 | None:intergenic | 5.0% |
| AGGAGGAACGTTTCGAGGTT+AGG | - | chr7_3:78629329-78629348 | Msa1127130:exon | 50.0% | |
| AGGAACGTTTCGAGGTTAGG+TGG | - | chr7_3:78629332-78629351 | Msa1127130:exon | 50.0% | |
| GTTTCGAGGTTAGGTGGAAG+TGG | - | chr7_3:78629338-78629357 | Msa1127130:CDS | 50.0% | |
| TCCATTGGAGAACCGCGAAT+TGG | - | chr7_3:78629789-78629808 | Msa1127130:intron | 50.0% | |
| ACCAATTCGCGGTTCTCCAA+TGG | + | chr7_3:78629793-78629812 | None:intergenic | 50.0% | |
| ! | CGGAGTATCCCCAGAAAATC+TGG | - | chr7_3:78629890-78629909 | Msa1127130:CDS | 50.0% |
| CTTCTTCCTCCTAACAGCAG+CGG | + | chr7_3:78630041-78630060 | None:intergenic | 50.0% | |
| ! | ACGTGGGGGGTATACATAGT+CGG | + | chr7_3:78630267-78630286 | None:intergenic | 50.0% |
| TATGTATACCCCCCACGTAC+CGG | - | chr7_3:78630269-78630288 | Msa1127130:intron | 50.0% | |
| TCAAAGAATCCGGTACGTGG+GGG | + | chr7_3:78630281-78630300 | None:intergenic | 50.0% | |
| CCTTCAAAGAATCCGGTACG+TGG | + | chr7_3:78630284-78630303 | None:intergenic | 50.0% | |
| CCACGTACCGGATTCTTTGA+AGG | - | chr7_3:78630281-78630300 | Msa1127130:intron | 50.0% | |
| GCAGAAAGGGAGAGAGATGT+TGG | + | chr7_3:78630723-78630742 | None:intergenic | 50.0% | |
| ACGGCGACGACATTATTACG+TGG | + | chr7_3:78631190-78631209 | None:intergenic | 50.0% | |
| AGGTTCATGTACTCGCAAGG+AGG | + | chr7_3:78631323-78631342 | None:intergenic | 50.0% | |
| GAAGGAAGGGACTAAATCCC+AGG | + | chr7_3:78631565-78631584 | None:intergenic | 50.0% | |
| TCAGTGGTGCACACTTGTCA+TGG | - | chr7_3:78631991-78632010 | Msa1127130:intron | 50.0% | |
| AGACTGAGGGATCATTCTGC+TGG | + | chr7_3:78632107-78632126 | None:intergenic | 50.0% | |
| TGAGAGGAGGAGAAGGAAGA+AGG | - | chr7_3:78632435-78632454 | Msa1127130:intron | 50.0% | |
| GGAGAGGGAAGCAGTATTCA+AGG | - | chr7_3:78632522-78632541 | Msa1127130:intron | 50.0% | |
| !! | TACGCGGAAGTACCGCGAAT+TGG | + | chr7_3:78629825-78629844 | None:intergenic | 55.0% |
| AATTCCGGCGAACCAGTACG+CGG | + | chr7_3:78629841-78629860 | None:intergenic | 55.0% | |
| AAAGAGGAGCCGCTGCTGTT+AGG | - | chr7_3:78630029-78630048 | Msa1127130:intron | 55.0% | |
| !! | TTCATTGGGCCTCTGGAGTC+TGG | - | chr7_3:78630090-78630109 | Msa1127130:intron | 55.0% |
| CAAAGAATCCGGTACGTGGG+GGG | + | chr7_3:78630280-78630299 | None:intergenic | 55.0% | |
| TTCGGTACGTGGTACGGGTT+CGG | + | chr7_3:78630322-78630341 | None:intergenic | 55.0% | |
| TTCGCTTCGGTACGTGGTAC+GGG | + | chr7_3:78630327-78630346 | None:intergenic | 55.0% | |
| GTTCGCTTCGGTACGTGGTA+CGG | + | chr7_3:78630328-78630347 | None:intergenic | 55.0% | |
| GGTGCTTCGCTAGAGCTTGT+TGG | - | chr7_3:78630648-78630667 | Msa1127130:intron | 55.0% | |
| ACGTGAGCTAACTAGAGGCG+AGG | + | chr7_3:78631656-78631675 | None:intergenic | 55.0% | |
| GGTTCGCGCGAACCAATTCG+CGG | + | chr7_3:78629810-78629829 | None:intergenic | 60.0% | |
| GGTTCGCGCGAACCAATTCG+CGG | - | chr7_3:78629810-78629829 | Msa1127130:intron | 60.0% | |
| TTCGCGGTACTTCCGCGTAC+TGG | - | chr7_3:78629826-78629845 | Msa1127130:intron | 60.0% | |
| !! | ACTTCCGCGTACTGGTTCGC+CGG | - | chr7_3:78629834-78629853 | Msa1127130:intron | 60.0% |
| ATTCGCAGCCGCAAGCGTAC+CGG | - | chr7_3:78629870-78629889 | Msa1127130:intron | 60.0% | |
| GGGATACTCCGGTACGCTTG+CGG | + | chr7_3:78629881-78629900 | None:intergenic | 60.0% | |
| TCGGTACGTGGTACGGGTTC+GGG | + | chr7_3:78630321-78630340 | None:intergenic | 60.0% | |
| TCGTGGTTCGCTTCGGTACG+TGG | + | chr7_3:78630333-78630352 | None:intergenic | 60.0% | |
| CGTGGATAGACCACCGTGCT+TGG | + | chr7_3:78631172-78631191 | None:intergenic | 60.0% | |
| GAGGAGCCGCTGCTGTTAGG+AGG | - | chr7_3:78630032-78630051 | Msa1127130:intron | 65.0% | |
| GTGGTACGGGTTCGGGTACG+CGG | + | chr7_3:78630314-78630333 | None:intergenic | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7_3 | gene | 78629194 | 78632836 | 78629194 | ID=Msa1127130;Name=Msa1127130 |
| chr7_3 | mRNA | 78629194 | 78632836 | 78629194 | ID=Msa1127130-mRNA-1;Parent=Msa1127130;Name=Msa1127130-mRNA-1;_AED=0.09;_eAED=0.09;_QI=60|1|1|1|0.5|1|3|140|192 |
| chr7_3 | exon | 78629194 | 78629630 | 78629194 | ID=Msa1127130-mRNA-1:exon:22070;Parent=Msa1127130-mRNA-1 |
| chr7_3 | exon | 78629887 | 78629996 | 78629887 | ID=Msa1127130-mRNA-1:exon:22069;Parent=Msa1127130-mRNA-1 |
| chr7_3 | exon | 78632605 | 78632836 | 78632605 | ID=Msa1127130-mRNA-1:exon:22068;Parent=Msa1127130-mRNA-1 |
| chr7_3 | five_prime_UTR | 78632777 | 78632836 | 78632777 | ID=Msa1127130-mRNA-1:five_prime_utr;Parent=Msa1127130-mRNA-1 |
| chr7_3 | CDS | 78632605 | 78632776 | 78632605 | ID=Msa1127130-mRNA-1:cds;Parent=Msa1127130-mRNA-1 |
| chr7_3 | CDS | 78629887 | 78629996 | 78629887 | ID=Msa1127130-mRNA-1:cds;Parent=Msa1127130-mRNA-1 |
| chr7_3 | CDS | 78629334 | 78629630 | 78629334 | ID=Msa1127130-mRNA-1:cds;Parent=Msa1127130-mRNA-1 |
| chr7_3 | three_prime_UTR | 78629194 | 78629333 | 78629194 | ID=Msa1127130-mRNA-1:three_prime_utr;Parent=Msa1127130-mRNA-1 |
| Gene Sequence |
| Protein sequence |
