Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0807930 | XP_017425985.1 | 84.369 | 499 | 46 | 1 | 32 | 530 | 1 | 467 | 0.0 | 808 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0807930 | sp|Q869R1|CTLHB_DICDI | 24.558 | 509 | 306 | 15 | 11 | 507 | 113 | 555 | 1.05e-31 | 132 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0807930 | G7JYE2 | 91.165 | 532 | 6 | 1 | 1 | 532 | 1 | 491 | 0.0 | 947 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0017510 | Msa0807930 | 0.807935 | 3.963582e-50 | -8.615850e-47 |
| Msa0669320 | Msa0807930 | 0.804457 | 2.140956e-49 | -8.615850e-47 |
| Msa0729720 | Msa0807930 | 0.815261 | 1.012087e-51 | -8.615850e-47 |
| Msa0770080 | Msa0807930 | 0.815181 | 1.054439e-51 | -8.615850e-47 |
| Msa0807930 | Msa0849100 | 0.873190 | 1.781033e-67 | -8.615850e-47 |
| Msa0807930 | Msa0880140 | 0.806575 | 7.696584e-50 | -8.615850e-47 |
| Msa0807930 | Msa0896220 | 0.804672 | 1.930812e-49 | -8.615850e-47 |
| Msa0807930 | Msa0982240 | 0.801248 | 9.849555e-49 | -8.615850e-47 |
| Msa0807930 | Msa1005870 | 0.800569 | 1.355190e-48 | -8.615850e-47 |
| Msa0807930 | Msa1047980 | 0.811591 | 6.483949e-51 | -8.615850e-47 |
| Msa0807930 | Msa1162550 | -0.804012 | 2.649391e-49 | -8.615850e-47 |
| Msa0807930 | Msa1170800 | 0.800260 | 1.566488e-48 | -8.615850e-47 |
| Msa0807930 | Msa1374550 | 0.810904 | 9.140060e-51 | -8.615850e-47 |
| Msa0807930 | Msa1423880 | 0.808454 | 3.072472e-50 | -8.615850e-47 |
| Msa0807930 | Msa1447150 | 0.801657 | 8.119870e-49 | -8.615850e-47 |
| Msa0807930 | Msa1465300 | 0.824002 | 1.022015e-53 | -8.615850e-47 |
| Msa0157290 | Msa0807930 | 0.808598 | 2.863386e-50 | -8.615850e-47 |
| Msa0194280 | Msa0807930 | 0.805226 | 1.478357e-49 | -8.615850e-47 |
| Msa0259500 | Msa0807930 | 0.801041 | 1.085366e-48 | -8.615850e-47 |
| Msa0287650 | Msa0807930 | 0.805591 | 1.240088e-49 | -8.615850e-47 |
| Msa0305700 | Msa0807930 | 0.807815 | 4.203371e-50 | -8.615850e-47 |
| Msa0341540 | Msa0807930 | 0.805624 | 1.219940e-49 | -8.615850e-47 |
| Msa0357290 | Msa0807930 | 0.803820 | 2.904009e-49 | -8.615850e-47 |
| Msa0523460 | Msa0807930 | 0.803583 | 3.252504e-49 | -8.615850e-47 |
| Msa0574890 | Msa0807930 | 0.813058 | 3.102004e-51 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0807930 | MtrunA17_Chr5g0422761 | 91.165 | 532 | 6 | 1 | 1 | 532 | 1 | 491 | 0.0 | 947 |
| Msa0807930 | MtrunA17_Chr1g0210161 | 76.389 | 504 | 75 | 2 | 29 | 532 | 35 | 494 | 0.0 | 731 |
| Msa0807930 | MtrunA17_Chr3g0090051 | 26.361 | 349 | 178 | 8 | 150 | 486 | 262 | 543 | 1.30e-24 | 107 |
| Msa0807930 | MtrunA17_Chr4g0061051 | 72.308 | 65 | 15 | 1 | 468 | 532 | 1 | 62 | 2.81e-24 | 95.9 |
| Msa0807930 | MtrunA17_Chr7g0275761 | 69.231 | 65 | 17 | 1 | 468 | 532 | 1 | 62 | 4.64e-23 | 92.4 |
| Msa0807930 | MtrunA17_Chr7g0254111 | 30.488 | 246 | 154 | 5 | 269 | 512 | 219 | 449 | 2.17e-21 | 97.1 |
| Msa0807930 | MtrunA17_Chr6g0460811 | 28.311 | 219 | 147 | 4 | 270 | 486 | 205 | 415 | 2.05e-20 | 94.0 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0807930 | AT1G25500.2 | 68.217 | 516 | 117 | 4 | 8 | 520 | 15 | 486 | 0.0 | 658 |
| Msa0807930 | AT1G25500.3 | 71.523 | 453 | 87 | 2 | 69 | 520 | 17 | 428 | 0.0 | 606 |
| Msa0807930 | AT1G25500.1 | 71.221 | 344 | 57 | 2 | 121 | 463 | 1 | 303 | 6.52e-162 | 462 |
| Msa0807930 | AT5G13760.1 | 25.519 | 337 | 196 | 4 | 150 | 486 | 252 | 533 | 3.37e-26 | 112 |
| Msa0807930 | AT3G04440.2 | 26.616 | 263 | 174 | 6 | 270 | 526 | 206 | 455 | 2.18e-17 | 85.1 |
| Msa0807930 | AT3G04440.1 | 26.616 | 263 | 174 | 6 | 270 | 526 | 229 | 478 | 2.86e-17 | 85.1 |
| Msa0807930 | AT3G03700.1 | 26.616 | 263 | 174 | 6 | 270 | 526 | 229 | 478 | 3.05e-17 | 85.1 |
Find 157 sgRNAs with CRISPR-Local
Find 347 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TCCTCTCTGTAAGCTTATTT+TGG | 0.132127 | 5_3:+31407838 | Msa0807930:CDS |
| GTCATCAACTAACTTTAAAA+TGG | 0.145187 | 5_3:-31404315 | None:intergenic |
| CCCTTGAAGATTGGTGTTTA+TGG | 0.163569 | 5_3:+31408418 | Msa0807930:intron |
| GAGAGTCGCATATGCGTTTA+TGG | 0.163908 | 5_3:+31407596 | Msa0807930:CDS |
| TTATGGCTGTCATGCTCTTA+TGG | 0.229988 | 5_3:+31407613 | Msa0807930:CDS |
| TTTAGTGATTCCTCAAATTT+AGG | 0.231192 | 5_3:-31409288 | None:intergenic |
| CTATTATTCGTTACAGCTTT+TGG | 0.231291 | 5_3:+31404540 | Msa0807930:five_prime_UTR |
| TTCATTCTGTCTGTTCTTGT+TGG | 0.232566 | 5_3:+31407735 | Msa0807930:CDS |
| GTAGTAGCTTTGAGCTATAT+TGG | 0.258275 | 5_3:+31409459 | Msa0807930:three_prime_UTR |
| TTCAGGTGCTGTGCTGTTAA+TGG | 0.262803 | 5_3:+31408522 | Msa0807930:CDS |
| TGCAGAACCAACATTGTAAA+TGG | 0.266173 | 5_3:-31407534 | None:intergenic |
| AGTTATCAGCCCACCTAAAA+TGG | 0.267123 | 5_3:-31408548 | None:intergenic |
| TTGTGATTCTTGGCGTTAAC+AGG | 0.271164 | 5_3:+31405573 | Msa0807930:CDS |
| CTGGAACTTGCTCTGGTGTT+TGG | 0.293203 | 5_3:+31408569 | Msa0807930:CDS |
| GGCGTTGGCACGATGTATTC+TGG | 0.294547 | 5_3:+31405507 | Msa0807930:CDS |
| CTGGTTTGACAGAGGATTAC+TGG | 0.297174 | 5_3:+31405657 | Msa0807930:CDS |
| TCCCATCTCTGAATCAATAA+TGG | 0.300289 | 5_3:-31409149 | None:intergenic |
| CATTATTCACAGCTGCTATT+AGG | 0.318508 | 5_3:+31408024 | Msa0807930:CDS |
| TATGCTGTTGCTGGCGGCGT+TGG | 0.323052 | 5_3:+31405686 | Msa0807930:CDS |
| TGGAACTTGCTCTGGTGTTT+GGG | 0.323340 | 5_3:+31408570 | Msa0807930:CDS |
| TTTGATTCGTTTCAGATAAG+AGG | 0.327931 | 5_3:+31408149 | Msa0807930:intron |
| CCATTCTTTGGAACTATTCA+AGG | 0.328417 | 5_3:-31409546 | None:intergenic |
| ATTCCTAAGTGGTGATGATT+TGG | 0.333572 | 5_3:-31404402 | None:intergenic |
| CAAGATAAGTGGTAAGAATA+TGG | 0.340491 | 5_3:-31405778 | None:intergenic |
| CTAACAAGATGCATCAAATA+TGG | 0.340891 | 5_3:+31409487 | Msa0807930:three_prime_UTR |
| TATGCTCATGGGCATGATAT+TGG | 0.343150 | 5_3:+31408639 | Msa0807930:CDS |
| TCATCAACTAACTTTAAAAT+GGG | 0.343416 | 5_3:-31404314 | None:intergenic |
| ATGCTGTTGCTGGCGGCGTT+GGG | 0.356399 | 5_3:+31405687 | Msa0807930:CDS |
| GGCGGCGTTGGGACTGCTCT+TGG | 0.356441 | 5_3:+31405698 | Msa0807930:CDS |
| AAATTTGAGGAATCACTAAA+TGG | 0.358261 | 5_3:+31409291 | Msa0807930:exon |
| TTAGCTTATGCTTATCTCAT+TGG | 0.359043 | 5_3:+31407789 | Msa0807930:CDS |
| TGGATGGCATTGTGGTCATT+TGG | 0.361862 | 5_3:+31407633 | Msa0807930:CDS |
| TTCCGCATAACAGATATATA+TGG | 0.362458 | 5_3:-31409123 | None:intergenic |
| TGGCCACTCTATGCTGTTGC+TGG | 0.372929 | 5_3:+31405677 | Msa0807930:CDS |
| TATGCTTTAACAACATCTTT+TGG | 0.373372 | 5_3:+31407984 | Msa0807930:CDS |
| ACGAAAATAGATTAGATAGA+AGG | 0.379012 | 5_3:-31404478 | None:intergenic |
| TACAATGTTGGTTCTGCAAA+AGG | 0.380351 | 5_3:+31407539 | Msa0807930:CDS |
| AACGTTGCCATGCGCCATCT+TGG | 0.385559 | 5_3:-31404346 | None:intergenic |
| GAGATGAAGTAGGAATAAAA+AGG | 0.387744 | 5_3:-31404600 | None:intergenic |
| CTTGTAGCGTATGATTGTTC+AGG | 0.389888 | 5_3:+31408505 | Msa0807930:CDS |
| ATGGAGTTGGTTGTTGCTGT+TGG | 0.393555 | 5_3:+31405721 | Msa0807930:CDS |
| TTGTGAGGCTGCATCAGTTC+CGG | 0.402103 | 5_3:+31407935 | Msa0807930:CDS |
| CCAGAAAACGCCTAAATTTG+AGG | 0.402709 | 5_3:+31409278 | Msa0807930:exon |
| TCAGGTGCTGTGCTGTTAAT+GGG | 0.404479 | 5_3:+31408523 | Msa0807930:CDS |
| ACAGTACATGTCATAGTGTC+TGG | 0.405736 | 5_3:+31407882 | Msa0807930:CDS |
| TAGTAGCTTTGAGCTATATT+GGG | 0.407631 | 5_3:+31409460 | Msa0807930:three_prime_UTR |
| CAAAACCCACGCCAATCAAC+TGG | 0.407766 | 5_3:-31405547 | None:intergenic |
| TTGTGGTCATTTGGAGCTGC+TGG | 0.409399 | 5_3:+31407642 | Msa0807930:CDS |
| TTGAATGTGAGAAAAGAAAA+AGG | 0.410051 | 5_3:-31404563 | None:intergenic |
| CTTGCTCTGGTGTTTGGGCA+TGG | 0.410854 | 5_3:+31408575 | Msa0807930:CDS |
| TCTGTTCTTGTTGGATTCGT+TGG | 0.416260 | 5_3:+31407744 | Msa0807930:CDS |
| CTATTTGTGATCCAGTTGAT+TGG | 0.417906 | 5_3:+31405536 | Msa0807930:CDS |
| GGTGCAATGTCTCGGAAATC+TGG | 0.422873 | 5_3:-31409187 | None:intergenic |
| GGTGGCTTCTTGTGGTGAGC+TGG | 0.428043 | 5_3:+31407700 | Msa0807930:CDS |
| TACCTGATTGTTGGTGGCAG+TGG | 0.431092 | 5_3:-31404683 | None:intergenic |
| TAAGTACACGTACCGGTTCA+TGG | 0.432396 | 5_3:+31405625 | Msa0807930:CDS |
| CCCATCTCTGAATCAATAAT+GGG | 0.437239 | 5_3:-31409148 | None:intergenic |
| TTAACTTAGTACCTGATTGT+TGG | 0.439199 | 5_3:-31404692 | None:intergenic |
| CTGATAACTGGAACTTGCTC+TGG | 0.440852 | 5_3:+31408562 | Msa0807930:CDS |
| GGACTGCTCTTGGATGGAGT+TGG | 0.442052 | 5_3:+31405708 | Msa0807930:CDS |
| ACCGTTCTGCTAGAGATGCC+TGG | 0.442652 | 5_3:+31408452 | Msa0807930:CDS |
| TGGAGTTGGTTGTTGCTGTT+GGG | 0.445429 | 5_3:+31405722 | Msa0807930:CDS |
| TGGGAGTTATTTCAATCAAC+GGG | 0.445833 | 5_3:+31408472 | Msa0807930:CDS |
| AGAGGAATCCGGTCAAAGAT+AGG | 0.447023 | 5_3:+31408167 | Msa0807930:CDS |
| CAGACTTCCATTTACAATGT+TGG | 0.448036 | 5_3:+31407527 | Msa0807930:intron |
| ATACTGTAAAGATTTCATTA+TGG | 0.449302 | 5_3:-31407964 | None:intergenic |
| ATCTTGTGGAGACTCTTGTC+AGG | 0.452670 | 5_3:+31408231 | Msa0807930:CDS |
| CATTCTTGCCTATCTTTGAC+CGG | 0.452929 | 5_3:-31408175 | None:intergenic |
| TAAAGATTTCATTATGGAGT+TGG | 0.454562 | 5_3:-31407958 | None:intergenic |
| GGACAGACACCTTCATCATC+TGG | 0.455412 | 5_3:-31405757 | None:intergenic |
| ACAATATGCAGGGAATGTAT+AGG | 0.458422 | 5_3:+31405435 | Msa0807930:intron |
| GGTTGGAGCGGCAATGGTTG+TGG | 0.459158 | 5_3:+31409082 | Msa0807930:intron |
| GTGTTTGGGCATGGATGAAA+TGG | 0.463121 | 5_3:+31408584 | Msa0807930:CDS |
| TTGGATTCGTTGGTTACATA+CGG | 0.465913 | 5_3:+31407754 | Msa0807930:CDS |
| GCGTTGGGACTGCTCTTGGA+TGG | 0.476999 | 5_3:+31405702 | Msa0807930:CDS |
| CGTTTCAGATAAGAGGAATC+CGG | 0.479860 | 5_3:+31408156 | Msa0807930:intron |
| ACTTTCATATTGCAACAAGT+TGG | 0.480387 | 5_3:+31409410 | Msa0807930:three_prime_UTR |
| CCCATTATTGATTCAGAGAT+GGG | 0.480499 | 5_3:+31409148 | Msa0807930:CDS |
| TTCCACTGCCACCAACAATC+AGG | 0.481194 | 5_3:+31404681 | Msa0807930:CDS |
| ATATTATATCTGTCATAGAT+AGG | 0.482146 | 5_3:+31405885 | Msa0807930:CDS |
| CTGATCCGTGTTAGTATCCA+TGG | 0.482289 | 5_3:+31407909 | Msa0807930:CDS |
| TCTTATGACAATTACCATCA+TGG | 0.483049 | 5_3:+31404654 | Msa0807930:exon |
| GCATGGCAACGTTACAATCA+TGG | 0.485605 | 5_3:+31404356 | Msa0807930:five_prime_UTR |
| ACGTTGCCATGCGCCATCTT+GGG | 0.486695 | 5_3:-31404345 | None:intergenic |
| AGCTCCTATGTTGAAGTCGC+TGG | 0.491841 | 5_3:-31409208 | None:intergenic |
| TGCTATTAGGACACTGCGAT+GGG | 0.492171 | 5_3:+31408037 | Msa0807930:CDS |
| TGGATCTACATCTATGCTCA+TGG | 0.499343 | 5_3:+31408627 | Msa0807930:CDS |
| AATGAAACTAAAAGATGTAA+AGG | 0.500917 | 5_3:-31409363 | None:intergenic |
| AACATAGGAGCTCGCGTGCA+AGG | 0.501996 | 5_3:+31409219 | Msa0807930:CDS |
| GAAAATGTGTTTGATGTTGA+GGG | 0.502240 | 5_3:+31409437 | Msa0807930:three_prime_UTR |
| ACCCATTATTGATTCAGAGA+TGG | 0.503313 | 5_3:+31409147 | Msa0807930:CDS |
| CAGCCTCATTCTCCATGAAC+CGG | 0.504266 | 5_3:-31405637 | None:intergenic |
| AGAAAATGTGTTTGATGTTG+AGG | 0.508848 | 5_3:+31409436 | Msa0807930:three_prime_UTR |
| GGCTGTCATGCTCTTATGGA+TGG | 0.510990 | 5_3:+31407617 | Msa0807930:CDS |
| GAGTCTCCACAAGATGGAAA+AGG | 0.511964 | 5_3:-31408223 | None:intergenic |
| CAGGGAATGTATAGGAAAAG+TGG | 0.517214 | 5_3:+31405443 | Msa0807930:intron |
| CGGTTCATGGAGAATGAGGC+TGG | 0.519033 | 5_3:+31405638 | Msa0807930:CDS |
| GATTTCATTATGGAGTTGGC+CGG | 0.519426 | 5_3:-31407954 | None:intergenic |
| TCTGCAAAAGGCTGTTAAGA+TGG | 0.525636 | 5_3:+31407551 | Msa0807930:CDS |
| TTGCTATTATGCATGTATGC+AGG | 0.526344 | 5_3:+31407815 | Msa0807930:CDS |
| CCGTTCTGCTAGAGATGCCT+GGG | 0.526826 | 5_3:+31408453 | Msa0807930:CDS |
| CATCAGTGAAGTGGTGAACA+TGG | 0.529486 | 5_3:+31405475 | Msa0807930:CDS |
| AAAAGGCTGTTAAGATGGTA+TGG | 0.531876 | 5_3:+31407556 | Msa0807930:CDS |
| TATGCGACTCTCATAACCTC+TGG | 0.532254 | 5_3:-31407585 | None:intergenic |
| TTGTTAGAGAGAGATGAAGT+AGG | 0.538904 | 5_3:-31404610 | None:intergenic |
| AAGTCGCTGGTGCAATGTCT+CGG | 0.544589 | 5_3:-31409195 | None:intergenic |
| CTGGGAGTTATTTCAATCAA+CGG | 0.546389 | 5_3:+31408471 | Msa0807930:CDS |
| CTGCTATTAGGACACTGCGA+TGG | 0.551628 | 5_3:+31408036 | Msa0807930:CDS |
| ACTTAGTACCTGATTGTTGG+TGG | 0.551958 | 5_3:-31404689 | None:intergenic |
| ACTGATCACAGCAAGATAAG+TGG | 0.552209 | 5_3:-31405789 | None:intergenic |
| TGCTCTTATGGATGGCATTG+TGG | 0.555214 | 5_3:+31407625 | Msa0807930:CDS |
| TGCACCAGCGACTTCAACAT+AGG | 0.555754 | 5_3:+31409204 | Msa0807930:CDS |
| TGGACGCTGGTGGCTTCTTG+TGG | 0.560110 | 5_3:+31407692 | Msa0807930:CDS |
| ATGCCAAATCATCACCACTT+AGG | 0.560450 | 5_3:+31404399 | Msa0807930:five_prime_UTR |
| TGACAAGAGTCTCCACAAGA+TGG | 0.562607 | 5_3:-31408229 | None:intergenic |
| TACGAGAATCAAGGTGATCG+TGG | 0.569177 | 5_3:-31409253 | None:intergenic |
| GTGATCCAGTTGATTGGCGT+GGG | 0.570702 | 5_3:+31405542 | Msa0807930:CDS |
| TGGTGTTGTAGCTTCAAGCA+TGG | 0.572102 | 5_3:+31407662 | Msa0807930:CDS |
| GCGCGCAATCCAGATGATGA+AGG | 0.572957 | 5_3:+31405748 | Msa0807930:CDS |
| GCATGGGTGACGGTGGACGC+TGG | 0.573897 | 5_3:+31407679 | Msa0807930:CDS |
| CAGTACATGTCATAGTGTCT+GGG | 0.574385 | 5_3:+31407883 | Msa0807930:CDS |
| TAACAAGTATGCGTATGTCC+AGG | 0.584550 | 5_3:+31408259 | Msa0807930:CDS |
| GGATCTACATCTATGCTCAT+GGG | 0.586213 | 5_3:+31408628 | Msa0807930:CDS |
| GATGACAACACAACCCAAGA+TGG | 0.586305 | 5_3:+31404332 | Msa0807930:five_prime_UTR |
| ACATAGGAGCTCGCGTGCAA+GGG | 0.586817 | 5_3:+31409220 | Msa0807930:CDS |
| TCGTTGGTTACATACGGATG+CGG | 0.588234 | 5_3:+31407760 | Msa0807930:CDS |
| GGTGTTGTAGCTTCAAGCAT+GGG | 0.590967 | 5_3:+31407663 | Msa0807930:CDS |
| TGTGATCCAGTTGATTGGCG+TGG | 0.597398 | 5_3:+31405541 | Msa0807930:CDS |
| AAGGATTGACATATATATCG+TGG | 0.603284 | 5_3:-31409344 | None:intergenic |
| GTACCGGTTCATGGAGAATG+AGG | 0.606474 | 5_3:+31405634 | Msa0807930:CDS |
| TGGAGCGGCAATGGTTGTGG+TGG | 0.610073 | 5_3:+31409085 | Msa0807930:CDS |
| TTTCTGGTATACGAGAATCA+AGG | 0.610752 | 5_3:-31409262 | None:intergenic |
| CATCAACTAACTTTAAAATG+GGG | 0.611406 | 5_3:-31404313 | None:intergenic |
| ATCCATATATATCTGTTATG+CGG | 0.615901 | 5_3:+31409121 | Msa0807930:CDS |
| CCACTCTATGCTGTTGCTGG+CGG | 0.616172 | 5_3:+31405680 | Msa0807930:CDS |
| TGGGTGACGGTGGACGCTGG+TGG | 0.621108 | 5_3:+31407682 | Msa0807930:CDS |
| TAGTATCCATGGTGGTTGTG+AGG | 0.622248 | 5_3:+31407920 | Msa0807930:CDS |
| ACATTGATAAGTACACGTAC+CGG | 0.624419 | 5_3:+31405618 | Msa0807930:CDS |
| CGTTGATTGAAATAACTCCC+AGG | 0.625002 | 5_3:-31408470 | None:intergenic |
| CAACAACAACATCAGTGAAG+TGG | 0.626519 | 5_3:+31405466 | Msa0807930:CDS |
| ACGAGAATCAAGGTGATCGT+GGG | 0.626896 | 5_3:-31409252 | None:intergenic |
| ACACAACCCAAGATGGCGCA+TGG | 0.628515 | 5_3:+31404339 | Msa0807930:five_prime_UTR |
| CCCAGGCATCTCTAGCAGAA+CGG | 0.629817 | 5_3:-31408453 | None:intergenic |
| GAATGAGGCTGGTTTGACAG+AGG | 0.635745 | 5_3:+31405649 | Msa0807930:CDS |
| AGCAGAGAGAGATTCCTAAG+TGG | 0.639078 | 5_3:-31404413 | None:intergenic |
| AACGTTACAATCATGGCGCG+TGG | 0.643009 | 5_3:+31404363 | Msa0807930:five_prime_UTR |
| CCGCCAGCAACAGCATAGAG+TGG | 0.647234 | 5_3:-31405680 | None:intergenic |
| TATTAGGACACTGCGATGGG+AGG | 0.654899 | 5_3:+31408040 | Msa0807930:CDS |
| ATGCAGCCTCACAACCACCA+TGG | 0.656737 | 5_3:-31407926 | None:intergenic |
| GCTTCAAGCATGGGTGACGG+TGG | 0.664433 | 5_3:+31407672 | Msa0807930:CDS |
| GTAGCTTCAAGCATGGGTGA+CGG | 0.668366 | 5_3:+31407669 | Msa0807930:CDS |
| GATGGTATGGAATCTTCCAG+AGG | 0.689240 | 5_3:+31407569 | Msa0807930:CDS |
| GGCAGTGGAAGAATCCATGA+TGG | 0.691125 | 5_3:-31404668 | None:intergenic |
| AACCACCATGGATACTAACA+CGG | 0.695588 | 5_3:-31407914 | None:intergenic |
| TGTTAACGCCAAGAATCACA+AGG | 0.715028 | 5_3:-31405571 | None:intergenic |
| TCCAAAATAAGCTTACAGAG+AGG | 0.747140 | 5_3:-31407839 | None:intergenic |
| ATCCGTGTTAGTATCCATGG+TGG | 0.762869 | 5_3:+31407912 | Msa0807930:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TATATATTGTAGAATAATTT+TGG | - | chr5_3:31407137-31407156 | None:intergenic | 10.0% |
| !! | ATTATTCTACAATATATATT+TGG | + | chr5_3:31407139-31407158 | Msa0807930:intron | 10.0% |
| !!! | TTGCTTTAATATAATTATTT+TGG | + | chr5_3:31407461-31407480 | Msa0807930:intron | 10.0% |
| !! | GAAAAGATAAAAAATATAGT+GGG | - | chr5_3:31404737-31404756 | None:intergenic | 15.0% |
| !! | TGAAAAGATAAAAAATATAG+TGG | - | chr5_3:31404738-31404757 | None:intergenic | 15.0% |
| !!! | TACATTTCTAAAATCAATTT+TGG | + | chr5_3:31405110-31405129 | Msa0807930:intron | 15.0% |
| !! | TAATTGAATTATTGTATGTT+TGG | - | chr5_3:31405153-31405172 | None:intergenic | 15.0% |
| !! | TAAAAAAATGTTAAGCTATA+AGG | - | chr5_3:31405176-31405195 | None:intergenic | 15.0% |
| !!! | AATTTTTATTCCAAGTAAAA+TGG | - | chr5_3:31405202-31405221 | None:intergenic | 15.0% |
| !!! | AATGTTTTTGATAAAATTAG+CGG | - | chr5_3:31405280-31405299 | None:intergenic | 15.0% |
| !! | TTTAAGTAAACAAATTAAAC+AGG | - | chr5_3:31406526-31406545 | None:intergenic | 15.0% |
| !! | AATAAATCAATTCATGTATT+GGG | - | chr5_3:31406688-31406707 | None:intergenic | 15.0% |
| !! | TAATAAATCAATTCATGTAT+TGG | - | chr5_3:31406689-31406708 | None:intergenic | 15.0% |
| !!! | GTTTCATTTAAAATAACTTT+AGG | + | chr5_3:31406931-31406950 | Msa0807930:intron | 15.0% |
| !! | TTATATTAAAGCAAATAGAA+GGG | - | chr5_3:31407455-31407474 | None:intergenic | 15.0% |
| !! | ATTATATTAAAGCAAATAGA+AGG | - | chr5_3:31407456-31407475 | None:intergenic | 15.0% |
| !! | TCAAAAGTAATAAAAAATCA+AGG | - | chr5_3:31408679-31408698 | None:intergenic | 15.0% |
| !!! | TCATCAACTAACTTTAAAAT+GGG | - | chr5_3:31404317-31404336 | None:intergenic | 20.0% |
| !!! | TGATTTTAGAAATGTAGAAT+TGG | - | chr5_3:31405106-31405125 | None:intergenic | 20.0% |
| !!! | TTTTTTATCTCCATTTTACT+TGG | + | chr5_3:31405189-31405208 | Msa0807930:intron | 20.0% |
| !! | ATATTATATCTGTCATAGAT+AGG | + | chr5_3:31405885-31405904 | Msa0807930:CDS | 20.0% |
| !!! | ATTGATGTTATTTTAAGCAT+TGG | + | chr5_3:31405976-31405995 | Msa0807930:intron | 20.0% |
| !! | CATAGCTTATAGAAATTAAA+TGG | + | chr5_3:31406183-31406202 | Msa0807930:intron | 20.0% |
| !! | AATTAAATGGAAATAGCTTA+TGG | + | chr5_3:31406196-31406215 | Msa0807930:intron | 20.0% |
| !!! | CAAATTTTAAAGAACAAGAA+AGG | - | chr5_3:31406328-31406347 | None:intergenic | 20.0% |
| !! | TAAATAGTTAATCTAATGAG+AGG | + | chr5_3:31406445-31406464 | Msa0807930:intron | 20.0% |
| !! | AAATTAAACAGGTTAAATCA+AGG | - | chr5_3:31406515-31406534 | None:intergenic | 20.0% |
| !! | GTTGTACTTAGATATAAATT+AGG | + | chr5_3:31406881-31406900 | Msa0807930:intron | 20.0% |
| !!! | TTTTAAATGAAACTTCTTAC+AGG | - | chr5_3:31406924-31406943 | None:intergenic | 20.0% |
| !!! | AAATAACTTTAGGTTTTGTT+TGG | + | chr5_3:31406941-31406960 | Msa0807930:intron | 20.0% |
| !!! | AATAACTTTAGGTTTTGTTT+GGG | + | chr5_3:31406942-31406961 | Msa0807930:intron | 20.0% |
| !!! | TTTAGAGTATTATAACAACA+TGG | + | chr5_3:31407082-31407101 | Msa0807930:intron | 20.0% |
| !!! | TATTGTAGAATAATTTTGGA+GGG | - | chr5_3:31407133-31407152 | None:intergenic | 20.0% |
| !!! | ATATTGTAGAATAATTTTGG+AGG | - | chr5_3:31407134-31407153 | None:intergenic | 20.0% |
| !! | ATACTGTAAAGATTTCATTA+TGG | - | chr5_3:31407967-31407986 | None:intergenic | 20.0% |
| !! | AAAGTAATAAAAAATCAAGG+AGG | - | chr5_3:31408676-31408695 | None:intergenic | 20.0% |
| !!! | GTAAAACATTTTTATGTTGT+AGG | + | chr5_3:31408806-31408825 | Msa0807930:intron | 20.0% |
| !! | AAATTTAGATATTAGGACTT+CGG | - | chr5_3:31408878-31408897 | None:intergenic | 20.0% |
| !! | CTTCTCTAAATTTAGATATT+AGG | - | chr5_3:31408885-31408904 | None:intergenic | 20.0% |
| !! | GATATAACACATACTTATTA+TGG | - | chr5_3:31408985-31409004 | None:intergenic | 20.0% |
| !! | AATGAAACTAAAAGATGTAA+AGG | - | chr5_3:31409366-31409385 | None:intergenic | 20.0% |
| !!! | CATCAACTAACTTTAAAATG+GGG | - | chr5_3:31404316-31404335 | None:intergenic | 25.0% |
| !! | GTCATCAACTAACTTTAAAA+TGG | - | chr5_3:31404318-31404337 | None:intergenic | 25.0% |
| ! | ACGAAAATAGATTAGATAGA+AGG | - | chr5_3:31404481-31404500 | None:intergenic | 25.0% |
| ! | TTGAATGTGAGAAAAGAAAA+AGG | - | chr5_3:31404566-31404585 | None:intergenic | 25.0% |
| !!! | TTTGATTTTTACCCTCTTTA+AGG | + | chr5_3:31404769-31404788 | Msa0807930:intron | 25.0% |
| ! | AAAGATACATACCTTAAAGA+GGG | - | chr5_3:31404783-31404802 | None:intergenic | 25.0% |
| !!! | TTGAACTTGTGTTCTTTTTT+AGG | + | chr5_3:31404801-31404820 | Msa0807930:intron | 25.0% |
| !!! | TGATTCTACTTGTTTTTTGT+GGG | - | chr5_3:31405073-31405092 | None:intergenic | 25.0% |
| !!! | TTGATTCTACTTGTTTTTTG+TGG | - | chr5_3:31405074-31405093 | None:intergenic | 25.0% |
| !! | ACAAGTAGAATCAATTTTTG+AGG | + | chr5_3:31405080-31405099 | Msa0807930:intron | 25.0% |
| ! | AGAAAACAACATCAAATCAA+AGG | - | chr5_3:31405948-31405967 | None:intergenic | 25.0% |
| ! | TTAATACAAACAGGTTCTTA+AGG | - | chr5_3:31406023-31406042 | None:intergenic | 25.0% |
| ! | ATTACGTTGTTAATACAAAC+AGG | - | chr5_3:31406032-31406051 | None:intergenic | 25.0% |
| ! | AACTTGTGAAAGTTCATATA+AGG | + | chr5_3:31406154-31406173 | Msa0807930:intron | 25.0% |
| ! | GAAATTGAAAGGATTGTATT+AGG | - | chr5_3:31406636-31406655 | None:intergenic | 25.0% |
| !! | CATTTTATGTTGTTAGCTAA+TGG | + | chr5_3:31406851-31406870 | Msa0807930:intron | 25.0% |
| ! | ATACAAAATTCCCCTAATTT+GGG | - | chr5_3:31407171-31407190 | None:intergenic | 25.0% |
| ! | AATACAAAATTCCCCTAATT+TGG | - | chr5_3:31407172-31407191 | None:intergenic | 25.0% |
| !! | ATGTCGCGAATTTTATTAAA+TGG | - | chr5_3:31407333-31407352 | None:intergenic | 25.0% |
| ! | ATTTAATAAAATTCGCGACA+TGG | + | chr5_3:31407332-31407351 | Msa0807930:intron | 25.0% |
| !! | ACATGGATACTTTCATTTTA+TGG | + | chr5_3:31407349-31407368 | Msa0807930:intron | 25.0% |
| ! | TAAAGATTTCATTATGGAGT+TGG | - | chr5_3:31407961-31407980 | None:intergenic | 25.0% |
| !! | TATGCTTTAACAACATCTTT+TGG | + | chr5_3:31407984-31408003 | Msa0807930:CDS | 25.0% |
| !! | TCCTAACAATATAGAGATTT+TGG | + | chr5_3:31408699-31408718 | Msa0807930:intron | 25.0% |
| !! | CCTAACAATATAGAGATTTT+GGG | + | chr5_3:31408700-31408719 | Msa0807930:intron | 25.0% |
| !! | CTAACAATATAGAGATTTTG+GGG | + | chr5_3:31408701-31408720 | Msa0807930:intron | 25.0% |
| ! | ATCCATATATATCTGTTATG+CGG | + | chr5_3:31409121-31409140 | Msa0807930:CDS | 25.0% |
| ! | TTTAGTGATTCCTCAAATTT+AGG | - | chr5_3:31409291-31409310 | None:intergenic | 25.0% |
| ! | AAATTTGAGGAATCACTAAA+TGG | + | chr5_3:31409291-31409310 | Msa0807930:exon | 25.0% |
| ! | CTATTATTCGTTACAGCTTT+TGG | + | chr5_3:31404540-31404559 | Msa0807930:five_prime_UTR | 30.0% |
| TGAAGTAGGAATAAAAAGGT+TGG | - | chr5_3:31404599-31404618 | None:intergenic | 30.0% | |
| GAGATGAAGTAGGAATAAAA+AGG | - | chr5_3:31404603-31404622 | None:intergenic | 30.0% | |
| TCTTATGACAATTACCATCA+TGG | + | chr5_3:31404654-31404673 | Msa0807930:exon | 30.0% | |
| TTAACTTAGTACCTGATTGT+TGG | - | chr5_3:31404695-31404714 | None:intergenic | 30.0% | |
| CAAAGATACATACCTTAAAG+AGG | - | chr5_3:31404784-31404803 | None:intergenic | 30.0% | |
| TATCAAACGAGCTCAAAATT+TGG | - | chr5_3:31404842-31404861 | None:intergenic | 30.0% | |
| TGATAAGCTAAGTGTATGAT+TGG | + | chr5_3:31404948-31404967 | Msa0807930:intron | 30.0% | |
| TATGATATACTCAGATGCTA+AGG | - | chr5_3:31405405-31405424 | None:intergenic | 30.0% | |
| TAGCATCTGAGTATATCATA+TGG | + | chr5_3:31405405-31405424 | Msa0807930:intron | 30.0% | |
| ! | ATGGATTTTTGACAATATGC+AGG | + | chr5_3:31405424-31405443 | Msa0807930:intron | 30.0% |
| ! | TGGATTTTTGACAATATGCA+GGG | + | chr5_3:31405425-31405444 | Msa0807930:intron | 30.0% |
| CAAGATAAGTGGTAAGAATA+TGG | - | chr5_3:31405781-31405800 | None:intergenic | 30.0% | |
| ! | CATAAAATGTAGTCTAAGAC+AGG | - | chr5_3:31405922-31405941 | None:intergenic | 30.0% |
| AATTTCATGTTCGCACAAAA+GGG | - | chr5_3:31406369-31406388 | None:intergenic | 30.0% | |
| ACAAACGTAATGTTCATCTT+CGG | + | chr5_3:31406556-31406575 | Msa0807930:intron | 30.0% | |
| TAGGTGAGCTCTTAAAATAT+TGG | - | chr5_3:31406593-31406612 | None:intergenic | 30.0% | |
| GTATTAGGAGGACAAATAAT+AGG | - | chr5_3:31406621-31406640 | None:intergenic | 30.0% | |
| ATTGAAAGGATTGTATTAGG+AGG | - | chr5_3:31406633-31406652 | None:intergenic | 30.0% | |
| !! | AGATTCTCTCTGAAATTGAA+AGG | - | chr5_3:31406647-31406666 | None:intergenic | 30.0% |
| CTAACAACATAAAATGACCT+AGG | - | chr5_3:31406847-31406866 | None:intergenic | 30.0% | |
| AATTGCTCTATCAAATAAGG+TGG | - | chr5_3:31407016-31407035 | None:intergenic | 30.0% | |
| ! | CCTTATTTGATAGAGCAATT+CGG | + | chr5_3:31407016-31407035 | Msa0807930:intron | 30.0% |
| TACAAAATTCCCCTAATTTG+GGG | - | chr5_3:31407170-31407189 | None:intergenic | 30.0% | |
| ! | ACTTTCATTTTATGGCAGAT+CGG | + | chr5_3:31407357-31407376 | Msa0807930:intron | 30.0% |
| !! | TTGGTCATTAAGTTGATTTC+TGG | + | chr5_3:31407480-31407499 | Msa0807930:intron | 30.0% |
| TTAGCTTATGCTTATCTCAT+TGG | + | chr5_3:31407789-31407808 | Msa0807930:CDS | 30.0% | |
| CATGAGAAATGAATACGTAA+AGG | - | chr5_3:31408114-31408133 | None:intergenic | 30.0% | |
| ! | TTTGATTCGTTTCAGATAAG+AGG | + | chr5_3:31408149-31408168 | Msa0807930:intron | 30.0% |
| ! | AGTGATAGAGCTTTTATGAT+TGG | + | chr5_3:31408607-31408626 | Msa0807930:CDS | 30.0% |
| CCCAAAATCTCTATATTGTT+AGG | - | chr5_3:31408703-31408722 | None:intergenic | 30.0% | |
| AACACCTATTGTAGAAAAGA+TGG | + | chr5_3:31408725-31408744 | Msa0807930:intron | 30.0% | |
| ATATCTCATTCTCACTGTAA+AGG | - | chr5_3:31408772-31408791 | None:intergenic | 30.0% | |
| TTTACAGTGAGAATGAGATA+TGG | + | chr5_3:31408771-31408790 | Msa0807930:intron | 30.0% | |
| ! | ATTTTTATGTTGTAGGTGCA+TGG | + | chr5_3:31408813-31408832 | Msa0807930:intron | 30.0% |
| GTCATGTGTAAATGGAATTT+GGG | - | chr5_3:31408913-31408932 | None:intergenic | 30.0% | |
| TGTCATGTGTAAATGGAATT+TGG | - | chr5_3:31408914-31408933 | None:intergenic | 30.0% | |
| !!! | TGACATGTGAATTTTTAGGT+TGG | + | chr5_3:31409065-31409084 | Msa0807930:intron | 30.0% |
| TTCCGCATAACAGATATATA+TGG | - | chr5_3:31409126-31409145 | None:intergenic | 30.0% | |
| AAATCTGGTTGAAAAACTCA+TGG | - | chr5_3:31409175-31409194 | None:intergenic | 30.0% | |
| AAGGATTGACATATATATCG+TGG | - | chr5_3:31409347-31409366 | None:intergenic | 30.0% | |
| ACTTTCATATTGCAACAAGT+TGG | + | chr5_3:31409410-31409429 | Msa0807930:three_prime_UTR | 30.0% | |
| AGAAAATGTGTTTGATGTTG+AGG | + | chr5_3:31409436-31409455 | Msa0807930:three_prime_UTR | 30.0% | |
| GAAAATGTGTTTGATGTTGA+GGG | + | chr5_3:31409437-31409456 | Msa0807930:three_prime_UTR | 30.0% | |
| !! | TAGTAGCTTTGAGCTATATT+GGG | + | chr5_3:31409460-31409479 | Msa0807930:three_prime_UTR | 30.0% |
| CTAACAAGATGCATCAAATA+TGG | + | chr5_3:31409487-31409506 | Msa0807930:three_prime_UTR | 30.0% | |
| ! | ATTCCTAAGTGGTGATGATT+TGG | - | chr5_3:31404405-31404424 | None:intergenic | 35.0% |
| TTGTTAGAGAGAGATGAAGT+AGG | - | chr5_3:31404613-31404632 | None:intergenic | 35.0% | |
| ! | TGTTTGGTTTCACTTCTAGA+GGG | - | chr5_3:31405137-31405156 | None:intergenic | 35.0% |
| ! | ATGTTTGGTTTCACTTCTAG+AGG | - | chr5_3:31405138-31405157 | None:intergenic | 35.0% |
| !! | ATAGTGGATAAGCAAGTGAT+TGG | - | chr5_3:31405309-31405328 | None:intergenic | 35.0% |
| ! | GCTAGCTTATAAGCTTATAG+TGG | - | chr5_3:31405325-31405344 | None:intergenic | 35.0% |
| ACAATATGCAGGGAATGTAT+AGG | + | chr5_3:31405435-31405454 | Msa0807930:intron | 35.0% | |
| CTATTTGTGATCCAGTTGAT+TGG | + | chr5_3:31405536-31405555 | Msa0807930:CDS | 35.0% | |
| ACAGGTTCAAGAAAAAGAAC+AGG | + | chr5_3:31405591-31405610 | Msa0807930:CDS | 35.0% | |
| ACATTGATAAGTACACGTAC+CGG | + | chr5_3:31405618-31405637 | Msa0807930:CDS | 35.0% | |
| ! | TGATCAGTGTTTTGTGTTTC+TGG | + | chr5_3:31405804-31405823 | Msa0807930:CDS | 35.0% |
| ! | GATCAGTGTTTTGTGTTTCT+GGG | + | chr5_3:31405805-31405824 | Msa0807930:CDS | 35.0% |
| !!! | TACGTACTTTTGAGACTGTT+TGG | - | chr5_3:31406252-31406271 | None:intergenic | 35.0% |
| CAAGAAAGGTAATCAATCTC+AGG | - | chr5_3:31406314-31406333 | None:intergenic | 35.0% | |
| CAATTTCATGTTCGCACAAA+AGG | - | chr5_3:31406370-31406389 | None:intergenic | 35.0% | |
| CAAACGTAATGTTCATCTTC+GGG | + | chr5_3:31406557-31406576 | Msa0807930:intron | 35.0% | |
| GGACAAATAATAGGATAGGT+AGG | - | chr5_3:31406612-31406631 | None:intergenic | 35.0% | |
| AGGAGGACAAATAATAGGAT+AGG | - | chr5_3:31406616-31406635 | None:intergenic | 35.0% | |
| ATTCATGTATTGGGAACTCA+GGG | - | chr5_3:31406679-31406698 | None:intergenic | 35.0% | |
| AATTCATGTATTGGGAACTC+AGG | - | chr5_3:31406680-31406699 | None:intergenic | 35.0% | |
| TCAGCGATTCAATTACTTTG+AGG | + | chr5_3:31406820-31406839 | Msa0807930:intron | 35.0% | |
| ! | TTCAATTACTTTGAGGACCT+AGG | + | chr5_3:31406827-31406846 | Msa0807930:intron | 35.0% |
| !!! | TTAGGTTTTGTTTGGGAGTT+TGG | + | chr5_3:31406949-31406968 | Msa0807930:intron | 35.0% |
| CCGAATTGCTCTATCAAATA+AGG | - | chr5_3:31407019-31407038 | None:intergenic | 35.0% | |
| !! | TAGAATAATTTTGGAGGGCT+TGG | - | chr5_3:31407128-31407147 | None:intergenic | 35.0% |
| ACAAAATTCCCCTAATTTGG+GGG | - | chr5_3:31407169-31407188 | None:intergenic | 35.0% | |
| AAGCAAATAGAAGGGAATGA+AGG | - | chr5_3:31407447-31407466 | None:intergenic | 35.0% | |
| !! | GTCATTAAGTTGATTTCTGG+TGG | + | chr5_3:31407483-31407502 | Msa0807930:intron | 35.0% |
| CAACATTGTAAATGGAAGTC+TGG | - | chr5_3:31407529-31407548 | None:intergenic | 35.0% | |
| CAGACTTCCATTTACAATGT+TGG | + | chr5_3:31407527-31407546 | Msa0807930:intron | 35.0% | |
| TGCAGAACCAACATTGTAAA+TGG | - | chr5_3:31407537-31407556 | None:intergenic | 35.0% | |
| !! | TACAATGTTGGTTCTGCAAA+AGG | + | chr5_3:31407539-31407558 | Msa0807930:CDS | 35.0% |
| AAAAGGCTGTTAAGATGGTA+TGG | + | chr5_3:31407556-31407575 | Msa0807930:CDS | 35.0% | |
| TTCATTCTGTCTGTTCTTGT+TGG | + | chr5_3:31407735-31407754 | Msa0807930:CDS | 35.0% | |
| ! | TTGGATTCGTTGGTTACATA+CGG | + | chr5_3:31407754-31407773 | Msa0807930:CDS | 35.0% |
| ! | TTGCTATTATGCATGTATGC+AGG | + | chr5_3:31407815-31407834 | Msa0807930:CDS | 35.0% |
| ! | TCCTCTCTGTAAGCTTATTT+TGG | + | chr5_3:31407838-31407857 | Msa0807930:CDS | 35.0% |
| TCCAAAATAAGCTTACAGAG+AGG | - | chr5_3:31407842-31407861 | None:intergenic | 35.0% | |
| !!! | TCTGTAAGCTTATTTTGGAC+AGG | + | chr5_3:31407843-31407862 | Msa0807930:CDS | 35.0% |
| !! | TCTTTTGGCAGCATTTGTTA+TGG | + | chr5_3:31407999-31408018 | Msa0807930:CDS | 35.0% |
| CATTATTCACAGCTGCTATT+AGG | + | chr5_3:31408024-31408043 | Msa0807930:CDS | 35.0% | |
| ! | TGATTTCCTTTTCCATCTTG+TGG | + | chr5_3:31408217-31408236 | Msa0807930:CDS | 35.0% |
| ! | GCTATTAGTTTACACTGTCT+TGG | + | chr5_3:31408350-31408369 | Msa0807930:intron | 35.0% |
| CCATAAACACCAATCTTCAA+GGG | - | chr5_3:31408421-31408440 | None:intergenic | 35.0% | |
| ACCATAAACACCAATCTTCA+AGG | - | chr5_3:31408422-31408441 | None:intergenic | 35.0% | |
| ! | CTGGGAGTTATTTCAATCAA+CGG | + | chr5_3:31408471-31408490 | Msa0807930:CDS | 35.0% |
| ! | TGGGAGTTATTTCAATCAAC+GGG | + | chr5_3:31408472-31408491 | Msa0807930:CDS | 35.0% |
| ! | CTGTTAATGGGAACCATTTT+AGG | + | chr5_3:31408535-31408554 | Msa0807930:CDS | 35.0% |
| ! | TTAATGGGAACCATTTTAGG+TGG | + | chr5_3:31408538-31408557 | Msa0807930:CDS | 35.0% |
| !! | TAATGGGAACCATTTTAGGT+GGG | + | chr5_3:31408539-31408558 | Msa0807930:CDS | 35.0% |
| ACCTATTGTAGAAAAGATGG+TGG | + | chr5_3:31408728-31408747 | Msa0807930:intron | 35.0% | |
| ! | TCCACCATCTTTTCTACAAT+AGG | - | chr5_3:31408732-31408751 | None:intergenic | 35.0% |
| ATTCTCACTGTAAAGGTTTG+AGG | - | chr5_3:31408765-31408784 | None:intergenic | 35.0% | |
| GTTCATTTCCATCACATCTT+AGG | + | chr5_3:31408940-31408959 | Msa0807930:intron | 35.0% | |
| ! | GGCATGACATGTGAATTTTT+AGG | + | chr5_3:31409061-31409080 | Msa0807930:intron | 35.0% |
| !!! | TGTGAATTTTTAGGTTGGAG+CGG | + | chr5_3:31409070-31409089 | Msa0807930:intron | 35.0% |
| !! | ACCCATTATTGATTCAGAGA+TGG | + | chr5_3:31409147-31409166 | Msa0807930:CDS | 35.0% |
| CCCATCTCTGAATCAATAAT+GGG | - | chr5_3:31409151-31409170 | None:intergenic | 35.0% | |
| !! | CCCATTATTGATTCAGAGAT+GGG | + | chr5_3:31409148-31409167 | Msa0807930:CDS | 35.0% |
| TCCCATCTCTGAATCAATAA+TGG | - | chr5_3:31409152-31409171 | None:intergenic | 35.0% | |
| ! | TTTCTGGTATACGAGAATCA+AGG | - | chr5_3:31409265-31409284 | None:intergenic | 35.0% |
| !! | GTAGTAGCTTTGAGCTATAT+TGG | + | chr5_3:31409459-31409478 | Msa0807930:three_prime_UTR | 35.0% |
| ATGCCAAATCATCACCACTT+AGG | + | chr5_3:31404399-31404418 | Msa0807930:five_prime_UTR | 40.0% | |
| ACTTAGTACCTGATTGTTGG+TGG | - | chr5_3:31404692-31404711 | None:intergenic | 40.0% | |
| GCTCATTCAGCTCATATAAC+AGG | + | chr5_3:31404886-31404905 | Msa0807930:intron | 40.0% | |
| CAGGGAATGTATAGGAAAAG+TGG | + | chr5_3:31405443-31405462 | Msa0807930:intron | 40.0% | |
| CAACAACAACATCAGTGAAG+TGG | + | chr5_3:31405466-31405485 | Msa0807930:CDS | 40.0% | |
| TGGTGAACATGGAGCAAAAA+AGG | + | chr5_3:31405486-31405505 | Msa0807930:CDS | 40.0% | |
| !! | GGTTTTGTCCTTGTGATTCT+TGG | + | chr5_3:31405563-31405582 | Msa0807930:CDS | 40.0% |
| TGTTAACGCCAAGAATCACA+AGG | - | chr5_3:31405574-31405593 | None:intergenic | 40.0% | |
| TTGTGATTCTTGGCGTTAAC+AGG | + | chr5_3:31405573-31405592 | Msa0807930:CDS | 40.0% | |
| ACTGATCACAGCAAGATAAG+TGG | - | chr5_3:31405792-31405811 | None:intergenic | 40.0% | |
| !!! | CTTTTGAGACTGTTTGGAAG+AGG | - | chr5_3:31406246-31406265 | None:intergenic | 40.0% |
| ! | TGAGAGGTAGAGCTTTTAAG+AGG | + | chr5_3:31406461-31406480 | Msa0807930:intron | 40.0% |
| !!! | GTTTTGTTTGGGAGTTTGGA+GGG | + | chr5_3:31406953-31406972 | Msa0807930:intron | 40.0% |
| !! | TTTTGTTTGGGAGTTTGGAG+GGG | + | chr5_3:31406954-31406973 | Msa0807930:intron | 40.0% |
| CAAAATTCCCCTAATTTGGG+GGG | - | chr5_3:31407168-31407187 | None:intergenic | 40.0% | |
| !! | AAGTTGATTTCTGGTGGCTT+TGG | + | chr5_3:31407489-31407508 | Msa0807930:intron | 40.0% |
| TCTGCAAAAGGCTGTTAAGA+TGG | + | chr5_3:31407551-31407570 | Msa0807930:CDS | 40.0% | |
| TTATGGCTGTCATGCTCTTA+TGG | + | chr5_3:31407613-31407632 | Msa0807930:CDS | 40.0% | |
| TCTGTTCTTGTTGGATTCGT+TGG | + | chr5_3:31407744-31407763 | Msa0807930:CDS | 40.0% | |
| ACAGTACATGTCATAGTGTC+TGG | + | chr5_3:31407882-31407901 | Msa0807930:CDS | 40.0% | |
| CAGTACATGTCATAGTGTCT+GGG | + | chr5_3:31407883-31407902 | Msa0807930:CDS | 40.0% | |
| AACCACCATGGATACTAACA+CGG | - | chr5_3:31407917-31407936 | None:intergenic | 40.0% | |
| GATTTCATTATGGAGTTGGC+CGG | - | chr5_3:31407957-31407976 | None:intergenic | 40.0% | |
| CGTTTCAGATAAGAGGAATC+CGG | + | chr5_3:31408156-31408175 | Msa0807930:intron | 40.0% | |
| CATTCTTGCCTATCTTTGAC+CGG | - | chr5_3:31408178-31408197 | None:intergenic | 40.0% | |
| TAACAAGTATGCGTATGTCC+AGG | + | chr5_3:31408259-31408278 | Msa0807930:CDS | 40.0% | |
| ! | CCCTTGAAGATTGGTGTTTA+TGG | + | chr5_3:31408418-31408437 | Msa0807930:intron | 40.0% |
| ! | CGTTGATTGAAATAACTCCC+AGG | - | chr5_3:31408473-31408492 | None:intergenic | 40.0% |
| CTTGTAGCGTATGATTGTTC+AGG | + | chr5_3:31408505-31408524 | Msa0807930:CDS | 40.0% | |
| AGTTATCAGCCCACCTAAAA+TGG | - | chr5_3:31408551-31408570 | None:intergenic | 40.0% | |
| !!! | ATTTTAGGTGGGCTGATAAC+TGG | + | chr5_3:31408550-31408569 | Msa0807930:CDS | 40.0% |
| TGGATCTACATCTATGCTCA+TGG | + | chr5_3:31408627-31408646 | Msa0807930:CDS | 40.0% | |
| GGATCTACATCTATGCTCAT+GGG | + | chr5_3:31408628-31408647 | Msa0807930:CDS | 40.0% | |
| TATGCTCATGGGCATGATAT+TGG | + | chr5_3:31408639-31408658 | Msa0807930:CDS | 40.0% | |
| TAGATATTAGGACTTCGGAG+AGG | - | chr5_3:31408873-31408892 | None:intergenic | 40.0% | |
| GTGTAAATGGAATTTGGGCT+GGG | - | chr5_3:31408908-31408927 | None:intergenic | 40.0% | |
| TGTGTAAATGGAATTTGGGC+TGG | - | chr5_3:31408909-31408928 | None:intergenic | 40.0% | |
| CCTGAGATGTCATGTGTAAA+TGG | - | chr5_3:31408921-31408940 | None:intergenic | 40.0% | |
| CCATTTACACATGACATCTC+AGG | + | chr5_3:31408918-31408937 | Msa0807930:intron | 40.0% | |
| GCATATTCAGCAATGCAAGT+TGG | - | chr5_3:31409030-31409049 | None:intergenic | 40.0% | |
| CTGAATATGCATCCGAACAT+AGG | + | chr5_3:31409040-31409059 | Msa0807930:intron | 40.0% | |
| TCACATGTCATGCCTATGTT+CGG | - | chr5_3:31409055-31409074 | None:intergenic | 40.0% | |
| ! | CCTCAAATTTAGGCGTTTTC+TGG | - | chr5_3:31409281-31409300 | None:intergenic | 40.0% |
| CCAGAAAACGCCTAAATTTG+AGG | + | chr5_3:31409278-31409297 | Msa0807930:exon | 40.0% | |
| GATGACAACACAACCCAAGA+TGG | + | chr5_3:31404332-31404351 | Msa0807930:five_prime_UTR | 45.0% | |
| GCATGGCAACGTTACAATCA+TGG | + | chr5_3:31404356-31404375 | Msa0807930:five_prime_UTR | 45.0% | |
| AGCAGAGAGAGATTCCTAAG+TGG | - | chr5_3:31404416-31404435 | None:intergenic | 45.0% | |
| !! | TTGGTTCTGCAGCGACAAAA+TGG | + | chr5_3:31404967-31404986 | Msa0807930:intron | 45.0% |
| CATCAGTGAAGTGGTGAACA+TGG | + | chr5_3:31405475-31405494 | Msa0807930:CDS | 45.0% | |
| ! | ACATGGAGCAAAAAAGGCGT+TGG | + | chr5_3:31405492-31405511 | Msa0807930:CDS | 45.0% |
| !! | TAAGTACACGTACCGGTTCA+TGG | + | chr5_3:31405625-31405644 | Msa0807930:CDS | 45.0% |
| ! | CTGGTTTGACAGAGGATTAC+TGG | + | chr5_3:31405657-31405676 | Msa0807930:CDS | 45.0% |
| ! | ATGGAGTTGGTTGTTGCTGT+TGG | + | chr5_3:31405721-31405740 | Msa0807930:CDS | 45.0% |
| ! | TGGAGTTGGTTGTTGCTGTT+GGG | + | chr5_3:31405722-31405741 | Msa0807930:CDS | 45.0% |
| AAGCAACACCCCAGAAAAAC+TGG | - | chr5_3:31405835-31405854 | None:intergenic | 45.0% | |
| !!! | TGGGGTGTTGCTTTTGCTAT+TGG | + | chr5_3:31405842-31405861 | Msa0807930:CDS | 45.0% |
| TGAGACTGTTTGGAAGAGGT+TGG | - | chr5_3:31406242-31406261 | None:intergenic | 45.0% | |
| !!! | GGTTTTGTTTGGGAGTTTGG+AGG | + | chr5_3:31406952-31406971 | Msa0807930:intron | 45.0% |
| TTTGTTTGGGAGTTTGGAGG+GGG | + | chr5_3:31406955-31406974 | Msa0807930:intron | 45.0% | |
| ! | ATTTGGAGTCCCCCCAAATT+AGG | + | chr5_3:31407156-31407175 | Msa0807930:intron | 45.0% |
| ! | TTTGGAGTCCCCCCAAATTA+GGG | + | chr5_3:31407157-31407176 | Msa0807930:intron | 45.0% |
| AAAGAGAAGGAGGAAGTGGA+AGG | - | chr5_3:31407229-31407248 | None:intergenic | 45.0% | |
| !! | GATGGCTTTGGGAAAAGAGA+AGG | - | chr5_3:31407242-31407261 | None:intergenic | 45.0% |
| GAGACAGTTAGGGTCTGTTT+GGG | - | chr5_3:31407277-31407296 | None:intergenic | 45.0% | |
| AGAGACAGTTAGGGTCTGTT+TGG | - | chr5_3:31407278-31407297 | None:intergenic | 45.0% | |
| CCATGGAACAGAGACAGTTA+GGG | - | chr5_3:31407287-31407306 | None:intergenic | 45.0% | |
| TCCATGGAACAGAGACAGTT+AGG | - | chr5_3:31407288-31407307 | None:intergenic | 45.0% | |
| !! | GCTGTTTCTATGCATCTCCA+TGG | - | chr5_3:31407304-31407323 | None:intergenic | 45.0% |
| GATGGTATGGAATCTTCCAG+AGG | + | chr5_3:31407569-31407588 | Msa0807930:CDS | 45.0% | |
| TATGCGACTCTCATAACCTC+TGG | - | chr5_3:31407588-31407607 | None:intergenic | 45.0% | |
| GAGAGTCGCATATGCGTTTA+TGG | + | chr5_3:31407596-31407615 | Msa0807930:CDS | 45.0% | |
| TGCTCTTATGGATGGCATTG+TGG | + | chr5_3:31407625-31407644 | Msa0807930:CDS | 45.0% | |
| TGGATGGCATTGTGGTCATT+TGG | + | chr5_3:31407633-31407652 | Msa0807930:CDS | 45.0% | |
| !! | TGGTGTTGTAGCTTCAAGCA+TGG | + | chr5_3:31407662-31407681 | Msa0807930:CDS | 45.0% |
| ! | GGTGTTGTAGCTTCAAGCAT+GGG | + | chr5_3:31407663-31407682 | Msa0807930:CDS | 45.0% |
| ! | TCGTTGGTTACATACGGATG+CGG | + | chr5_3:31407760-31407779 | Msa0807930:CDS | 45.0% |
| CTGATCCGTGTTAGTATCCA+TGG | + | chr5_3:31407909-31407928 | Msa0807930:CDS | 45.0% | |
| ATCCGTGTTAGTATCCATGG+TGG | + | chr5_3:31407912-31407931 | Msa0807930:CDS | 45.0% | |
| TAGTATCCATGGTGGTTGTG+AGG | + | chr5_3:31407920-31407939 | Msa0807930:CDS | 45.0% | |
| TGCTATTAGGACACTGCGAT+GGG | + | chr5_3:31408037-31408056 | Msa0807930:CDS | 45.0% | |
| AGAGGAATCCGGTCAAAGAT+AGG | + | chr5_3:31408167-31408186 | Msa0807930:CDS | 45.0% | |
| GAGTCTCCACAAGATGGAAA+AGG | - | chr5_3:31408226-31408245 | None:intergenic | 45.0% | |
| TGACAAGAGTCTCCACAAGA+TGG | - | chr5_3:31408232-31408251 | None:intergenic | 45.0% | |
| ATCTTGTGGAGACTCTTGTC+AGG | + | chr5_3:31408231-31408250 | Msa0807930:CDS | 45.0% | |
| CACCAATCTTCAAGGGACAT+GGG | - | chr5_3:31408414-31408433 | None:intergenic | 45.0% | |
| ACACCAATCTTCAAGGGACA+TGG | - | chr5_3:31408415-31408434 | None:intergenic | 45.0% | |
| ! | TTCAGGTGCTGTGCTGTTAA+TGG | + | chr5_3:31408522-31408541 | Msa0807930:CDS | 45.0% |
| ! | TCAGGTGCTGTGCTGTTAAT+GGG | + | chr5_3:31408523-31408542 | Msa0807930:CDS | 45.0% |
| ! | CTGATAACTGGAACTTGCTC+TGG | + | chr5_3:31408562-31408581 | Msa0807930:CDS | 45.0% |
| ! | TGGAACTTGCTCTGGTGTTT+GGG | + | chr5_3:31408570-31408589 | Msa0807930:CDS | 45.0% |
| GTGTTTGGGCATGGATGAAA+TGG | + | chr5_3:31408584-31408603 | Msa0807930:CDS | 45.0% | |
| GACATGCACCTAAGATGTGA+TGG | - | chr5_3:31408951-31408970 | None:intergenic | 45.0% | |
| !!! | TTTTTAGGTTGGAGCGGCAA+TGG | + | chr5_3:31409076-31409095 | Msa0807930:intron | 45.0% |
| ACGAGAATCAAGGTGATCGT+GGG | - | chr5_3:31409255-31409274 | None:intergenic | 45.0% | |
| TACGAGAATCAAGGTGATCG+TGG | - | chr5_3:31409256-31409275 | None:intergenic | 45.0% | |
| AACGTTACAATCATGGCGCG+TGG | + | chr5_3:31404363-31404382 | Msa0807930:five_prime_UTR | 50.0% | |
| GGCAGTGGAAGAATCCATGA+TGG | - | chr5_3:31404671-31404690 | None:intergenic | 50.0% | |
| TTCCACTGCCACCAACAATC+AGG | + | chr5_3:31404681-31404700 | Msa0807930:CDS | 50.0% | |
| !! | TACCTGATTGTTGGTGGCAG+TGG | - | chr5_3:31404686-31404705 | None:intergenic | 50.0% |
| TGTGATCCAGTTGATTGGCG+TGG | + | chr5_3:31405541-31405560 | Msa0807930:CDS | 50.0% | |
| GTGATCCAGTTGATTGGCGT+GGG | + | chr5_3:31405542-31405561 | Msa0807930:CDS | 50.0% | |
| CAAAACCCACGCCAATCAAC+TGG | - | chr5_3:31405550-31405569 | None:intergenic | 50.0% | |
| !! | GTACCGGTTCATGGAGAATG+AGG | + | chr5_3:31405634-31405653 | Msa0807930:CDS | 50.0% |
| CAGCCTCATTCTCCATGAAC+CGG | - | chr5_3:31405640-31405659 | None:intergenic | 50.0% | |
| !! | GAATGAGGCTGGTTTGACAG+AGG | + | chr5_3:31405649-31405668 | Msa0807930:CDS | 50.0% |
| GGACAGACACCTTCATCATC+TGG | - | chr5_3:31405760-31405779 | None:intergenic | 50.0% | |
| ! | TCTGGGCTCACCAGTTTTTC+TGG | + | chr5_3:31405822-31405841 | Msa0807930:CDS | 50.0% |
| ! | CTGGGCTCACCAGTTTTTCT+GGG | + | chr5_3:31405823-31405842 | Msa0807930:CDS | 50.0% |
| ! | TGGGCTCACCAGTTTTTCTG+GGG | + | chr5_3:31405824-31405843 | Msa0807930:CDS | 50.0% |
| TTGGAGTCCCCCCAAATTAG+GGG | + | chr5_3:31407158-31407177 | Msa0807930:intron | 50.0% | |
| TGGAAGGAAAGGAGGGCTTT+GGG | - | chr5_3:31407213-31407232 | None:intergenic | 50.0% | |
| GAGGAAGTGGAAGGAAAGGA+GGG | - | chr5_3:31407220-31407239 | None:intergenic | 50.0% | |
| GAAGGAGGAAGTGGAAGGAA+AGG | - | chr5_3:31407224-31407243 | None:intergenic | 50.0% | |
| GGGAAAAGAGAAGGAGGAAG+TGG | - | chr5_3:31407233-31407252 | None:intergenic | 50.0% | |
| !! | GGCTTTGGGAAAAGAGAAGG+AGG | - | chr5_3:31407239-31407258 | None:intergenic | 50.0% |
| TCTGTTTGGGAGTTCAGGAG+GGG | - | chr5_3:31407264-31407283 | None:intergenic | 50.0% | |
| GTCTGTTTGGGAGTTCAGGA+GGG | - | chr5_3:31407265-31407284 | None:intergenic | 50.0% | |
| TAGGGTCTGTTTGGGAGTTC+AGG | - | chr5_3:31407269-31407288 | None:intergenic | 50.0% | |
| CCCTAACTGTCTCTGTTCCA+TGG | + | chr5_3:31407284-31407303 | Msa0807930:intron | 50.0% | |
| GGCTGTCATGCTCTTATGGA+TGG | + | chr5_3:31407617-31407636 | Msa0807930:CDS | 50.0% | |
| ! | TTGTGGTCATTTGGAGCTGC+TGG | + | chr5_3:31407642-31407661 | Msa0807930:CDS | 50.0% |
| GTAGCTTCAAGCATGGGTGA+CGG | + | chr5_3:31407669-31407688 | Msa0807930:CDS | 50.0% | |
| TTGTGAGGCTGCATCAGTTC+CGG | + | chr5_3:31407935-31407954 | Msa0807930:CDS | 50.0% | |
| CTGCTATTAGGACACTGCGA+TGG | + | chr5_3:31408036-31408055 | Msa0807930:CDS | 50.0% | |
| TATTAGGACACTGCGATGGG+AGG | + | chr5_3:31408040-31408059 | Msa0807930:CDS | 50.0% | |
| CTCCCATGTCCCTTGAAGAT+TGG | + | chr5_3:31408409-31408428 | Msa0807930:intron | 50.0% | |
| ! | CTGGAACTTGCTCTGGTGTT+TGG | + | chr5_3:31408569-31408588 | Msa0807930:CDS | 50.0% |
| GGTGCAATGTCTCGGAAATC+TGG | - | chr5_3:31409190-31409209 | None:intergenic | 50.0% | |
| AAGTCGCTGGTGCAATGTCT+CGG | - | chr5_3:31409198-31409217 | None:intergenic | 50.0% | |
| TGCACCAGCGACTTCAACAT+AGG | + | chr5_3:31409204-31409223 | Msa0807930:CDS | 50.0% | |
| AGCTCCTATGTTGAAGTCGC+TGG | - | chr5_3:31409211-31409230 | None:intergenic | 50.0% | |
| ACACAACCCAAGATGGCGCA+TGG | + | chr5_3:31404339-31404358 | Msa0807930:five_prime_UTR | 55.0% | |
| ACGTTGCCATGCGCCATCTT+GGG | - | chr5_3:31404348-31404367 | None:intergenic | 55.0% | |
| AACGTTGCCATGCGCCATCT+TGG | - | chr5_3:31404349-31404368 | None:intergenic | 55.0% | |
| !! | GGCGTTGGCACGATGTATTC+TGG | + | chr5_3:31405507-31405526 | Msa0807930:CDS | 55.0% |
| CGGTTCATGGAGAATGAGGC+TGG | + | chr5_3:31405638-31405657 | Msa0807930:CDS | 55.0% | |
| TGGCCACTCTATGCTGTTGC+TGG | + | chr5_3:31405677-31405696 | Msa0807930:CDS | 55.0% | |
| CCACTCTATGCTGTTGCTGG+CGG | + | chr5_3:31405680-31405699 | Msa0807930:CDS | 55.0% | |
| GGACTGCTCTTGGATGGAGT+TGG | + | chr5_3:31405708-31405727 | Msa0807930:CDS | 55.0% | |
| GCGCGCAATCCAGATGATGA+AGG | + | chr5_3:31405748-31405767 | Msa0807930:CDS | 55.0% | |
| ! | AGGGGGTGGACTTTGTTGAG+AGG | + | chr5_3:31406972-31406991 | Msa0807930:intron | 55.0% |
| ! | GGGGGTGGACTTTGTTGAGA+GGG | + | chr5_3:31406973-31406992 | Msa0807930:intron | 55.0% |
| GGAAGGAAAGGAGGGCTTTG+GGG | - | chr5_3:31407212-31407231 | None:intergenic | 55.0% | |
| GTGGAAGGAAAGGAGGGCTT+TGG | - | chr5_3:31407214-31407233 | None:intergenic | 55.0% | |
| GGAGGAAGTGGAAGGAAAGG+AGG | - | chr5_3:31407221-31407240 | None:intergenic | 55.0% | |
| GTTCAGGAGGGGATGGCTTT+GGG | - | chr5_3:31407253-31407272 | None:intergenic | 55.0% | |
| AGTTCAGGAGGGGATGGCTT+TGG | - | chr5_3:31407254-31407273 | None:intergenic | 55.0% | |
| TTTGGGAGTTCAGGAGGGGA+TGG | - | chr5_3:31407260-31407279 | None:intergenic | 55.0% | |
| GGTCTGTTTGGGAGTTCAGG+AGG | - | chr5_3:31407266-31407285 | None:intergenic | 55.0% | |
| ATGCAGCCTCACAACCACCA+TGG | - | chr5_3:31407929-31407948 | None:intergenic | 55.0% | |
| ACCGTTCTGCTAGAGATGCC+TGG | + | chr5_3:31408452-31408471 | Msa0807930:CDS | 55.0% | |
| CCCAGGCATCTCTAGCAGAA+CGG | - | chr5_3:31408456-31408475 | None:intergenic | 55.0% | |
| CCGTTCTGCTAGAGATGCCT+GGG | + | chr5_3:31408453-31408472 | Msa0807930:CDS | 55.0% | |
| CTTGCTCTGGTGTTTGGGCA+TGG | + | chr5_3:31408575-31408594 | Msa0807930:CDS | 55.0% | |
| AACATAGGAGCTCGCGTGCA+AGG | + | chr5_3:31409219-31409238 | Msa0807930:CDS | 55.0% | |
| ACATAGGAGCTCGCGTGCAA+GGG | + | chr5_3:31409220-31409239 | Msa0807930:CDS | 55.0% | |
| CCGCCAGCAACAGCATAGAG+TGG | - | chr5_3:31405683-31405702 | None:intergenic | 60.0% | |
| TATGCTGTTGCTGGCGGCGT+TGG | + | chr5_3:31405686-31405705 | Msa0807930:CDS | 60.0% | |
| ATGCTGTTGCTGGCGGCGTT+GGG | + | chr5_3:31405687-31405706 | Msa0807930:CDS | 60.0% | |
| GCGTTGGGACTGCTCTTGGA+TGG | + | chr5_3:31405702-31405721 | Msa0807930:CDS | 60.0% | |
| GTTTGGGAGTTTGGAGGGGG+TGG | + | chr5_3:31406958-31406977 | Msa0807930:intron | 60.0% | |
| ! | GCTTCAAGCATGGGTGACGG+TGG | + | chr5_3:31407672-31407691 | Msa0807930:CDS | 60.0% |
| TGGACGCTGGTGGCTTCTTG+TGG | + | chr5_3:31407692-31407711 | Msa0807930:CDS | 60.0% | |
| GGTGGCTTCTTGTGGTGAGC+TGG | + | chr5_3:31407700-31407719 | Msa0807930:CDS | 60.0% | |
| GGTTGGAGCGGCAATGGTTG+TGG | + | chr5_3:31409082-31409101 | Msa0807930:intron | 60.0% | |
| TGGAGCGGCAATGGTTGTGG+TGG | + | chr5_3:31409085-31409104 | Msa0807930:CDS | 60.0% | |
| ! | GGCGGCGTTGGGACTGCTCT+TGG | + | chr5_3:31405698-31405717 | Msa0807930:CDS | 70.0% |
| ! | GCATGGGTGACGGTGGACGC+TGG | + | chr5_3:31407679-31407698 | Msa0807930:CDS | 70.0% |
| ! | TGGGTGACGGTGGACGCTGG+TGG | + | chr5_3:31407682-31407701 | Msa0807930:CDS | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr5_3 | gene | 31404294 | 31409559 | 31404294 | ID=Msa0807930;Name=Msa0807930 |
| chr5_3 | mRNA | 31404294 | 31409559 | 31404294 | ID=Msa0807930-mRNA-1;Parent=Msa0807930;Name=Msa0807930-mRNA-1;_AED=0.03;_eAED=0.03;_QI=364|1|0.83|1|1|1|6|267|532 |
| chr5_3 | exon | 31404294 | 31404702 | 31404294 | ID=Msa0807930-mRNA-1:exon:10432;Parent=Msa0807930-mRNA-1 |
| chr5_3 | exon | 31405446 | 31405906 | 31405446 | ID=Msa0807930-mRNA-1:exon:10433;Parent=Msa0807930-mRNA-1 |
| chr5_3 | exon | 31407530 | 31408061 | 31407530 | ID=Msa0807930-mRNA-1:exon:10434;Parent=Msa0807930-mRNA-1 |
| chr5_3 | exon | 31408164 | 31408280 | 31408164 | ID=Msa0807930-mRNA-1:exon:10435;Parent=Msa0807930-mRNA-1 |
| chr5_3 | exon | 31408427 | 31408660 | 31408427 | ID=Msa0807930-mRNA-1:exon:10436;Parent=Msa0807930-mRNA-1 |
| chr5_3 | exon | 31409083 | 31409559 | 31409083 | ID=Msa0807930-mRNA-1:exon:10437;Parent=Msa0807930-mRNA-1 |
| chr5_3 | five_prime_UTR | 31404294 | 31404657 | 31404294 | ID=Msa0807930-mRNA-1:five_prime_utr;Parent=Msa0807930-mRNA-1 |
| chr5_3 | CDS | 31404658 | 31404702 | 31404658 | ID=Msa0807930-mRNA-1:cds;Parent=Msa0807930-mRNA-1 |
| chr5_3 | CDS | 31405446 | 31405906 | 31405446 | ID=Msa0807930-mRNA-1:cds;Parent=Msa0807930-mRNA-1 |
| chr5_3 | CDS | 31407530 | 31408061 | 31407530 | ID=Msa0807930-mRNA-1:cds;Parent=Msa0807930-mRNA-1 |
| chr5_3 | CDS | 31408164 | 31408280 | 31408164 | ID=Msa0807930-mRNA-1:cds;Parent=Msa0807930-mRNA-1 |
| chr5_3 | CDS | 31408427 | 31408660 | 31408427 | ID=Msa0807930-mRNA-1:cds;Parent=Msa0807930-mRNA-1 |
| chr5_3 | CDS | 31409083 | 31409292 | 31409083 | ID=Msa0807930-mRNA-1:cds;Parent=Msa0807930-mRNA-1 |
| chr5_3 | three_prime_UTR | 31409293 | 31409559 | 31409293 | ID=Msa0807930-mRNA-1:three_prime_utr;Parent=Msa0807930-mRNA-1 |
| Gene Sequence |
| Protein sequence |
