Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0729720 | XP_003614503.2 | 94.041 | 386 | 4 | 1 | 1 | 386 | 125 | 491 | 0.0 | 731 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0729720 | sp|Q869R1|CTLHB_DICDI | 26.822 | 343 | 222 | 6 | 23 | 361 | 238 | 555 | 1.03e-31 | 129 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0729720 | G7JYE2 | 94.041 | 386 | 4 | 1 | 1 | 386 | 125 | 491 | 0.0 | 731 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0001450 | Msa0729720 | 0.830068 | 3.615386e-55 | -8.615850e-47 |
| Msa0003700 | Msa0729720 | 0.835746 | 1.402270e-56 | -8.615850e-47 |
| Msa0003890 | Msa0729720 | 0.801411 | 9.121476e-49 | -8.615850e-47 |
| Msa0011660 | Msa0729720 | -0.829151 | 6.044566e-55 | -8.615850e-47 |
| Msa0015390 | Msa0729720 | 0.837293 | 5.662647e-57 | -8.615850e-47 |
| Msa0017510 | Msa0729720 | 0.848336 | 6.541055e-60 | -8.615850e-47 |
| Msa0024210 | Msa0729720 | -0.819885 | 9.179989e-53 | -8.615850e-47 |
| Msa0029310 | Msa0729720 | 0.814676 | 1.364761e-51 | -8.615850e-47 |
| Msa0031340 | Msa0729720 | 0.808362 | 3.215450e-50 | -8.615850e-47 |
| Msa0032110 | Msa0729720 | 0.808701 | 2.721825e-50 | -8.615850e-47 |
| Msa0036140 | Msa0729720 | 0.801287 | 9.668097e-49 | -8.615850e-47 |
| Msa0046100 | Msa0729720 | 0.822202 | 2.687952e-53 | -8.615850e-47 |
| Msa0051020 | Msa0729720 | 0.817808 | 2.721907e-52 | -8.615850e-47 |
| Msa0052680 | Msa0729720 | 0.832985 | 6.914078e-56 | -8.615850e-47 |
| Msa0052730 | Msa0729720 | 0.827086 | 1.899458e-54 | -8.615850e-47 |
| Msa0053780 | Msa0729720 | 0.809093 | 2.243902e-50 | -8.615850e-47 |
| Msa0061340 | Msa0729720 | 0.802830 | 4.657116e-49 | -8.615850e-47 |
| Msa0069330 | Msa0729720 | 0.802378 | 5.771076e-49 | -8.615850e-47 |
| Msa0090360 | Msa0729720 | 0.812157 | 4.882448e-51 | -8.615850e-47 |
| Msa0101270 | Msa0729720 | 0.817049 | 4.032980e-52 | -8.615850e-47 |
| Msa0104550 | Msa0729720 | 0.802224 | 6.210692e-49 | -8.615850e-47 |
| Msa0110970 | Msa0729720 | 0.803865 | 2.842655e-49 | -8.615850e-47 |
| Msa0114060 | Msa0729720 | 0.806845 | 6.748516e-50 | -8.615850e-47 |
| Msa0115270 | Msa0729720 | 0.800611 | 1.328835e-48 | -8.615850e-47 |
| Msa0120010 | Msa0729720 | -0.809228 | 2.098786e-50 | -8.615850e-47 |
| Msa0120020 | Msa0729720 | -0.805630 | 1.216402e-49 | -8.615850e-47 |
| Msa0120040 | Msa0729720 | -0.802263 | 6.095007e-49 | -8.615850e-47 |
| Msa0602870 | Msa0729720 | 0.856120 | 3.986990e-62 | -8.615850e-47 |
| Msa0610840 | Msa0729720 | -0.806138 | 9.514524e-50 | -8.615850e-47 |
| Msa0615710 | Msa0729720 | 0.811702 | 6.133082e-51 | -8.615850e-47 |
| Msa0639310 | Msa0729720 | 0.810568 | 1.080689e-50 | -8.615850e-47 |
| Msa0643890 | Msa0729720 | 0.854005 | 1.641533e-61 | -8.615850e-47 |
| Msa0657580 | Msa0729720 | 0.814693 | 1.353003e-51 | -8.615850e-47 |
| Msa0663390 | Msa0729720 | 0.804790 | 1.824317e-49 | -8.615850e-47 |
| Msa0669320 | Msa0729720 | 0.831899 | 1.285152e-55 | -8.615850e-47 |
| Msa0674580 | Msa0729720 | 0.804688 | 1.916194e-49 | -8.615850e-47 |
| Msa0682680 | Msa0729720 | 0.817232 | 3.668697e-52 | -8.615850e-47 |
| Msa0683730 | Msa0729720 | 0.863414 | 2.532475e-64 | -8.615850e-47 |
| Msa0710800 | Msa0729720 | 0.810565 | 1.082229e-50 | -8.615850e-47 |
| Msa0713790 | Msa0729720 | 0.800927 | 1.145177e-48 | -8.615850e-47 |
| Msa0713820 | Msa0729720 | 0.819722 | 1.000598e-52 | -8.615850e-47 |
| Msa0718750 | Msa0729720 | 0.803649 | 3.152464e-49 | -8.615850e-47 |
| Msa0720690 | Msa0729720 | 0.815591 | 8.546862e-52 | -8.615850e-47 |
| Msa0721280 | Msa0729720 | 0.807600 | 4.669139e-50 | -8.615850e-47 |
| Msa0728630 | Msa0729720 | 0.832825 | 7.579251e-56 | -8.615850e-47 |
| Msa0729720 | Msa0730430 | 0.830887 | 2.279322e-55 | -8.615850e-47 |
| Msa0729720 | Msa0731940 | 0.805378 | 1.374416e-49 | -8.615850e-47 |
| Msa0729720 | Msa0740510 | 0.843273 | 1.550467e-58 | -8.615850e-47 |
| Msa0729720 | Msa0741240 | 0.815500 | 8.954462e-52 | -8.615850e-47 |
| Msa0729720 | Msa0741840 | 0.804665 | 1.937174e-49 | -8.615850e-47 |
| Msa0729720 | Msa0756060 | 0.828151 | 1.054473e-54 | -8.615850e-47 |
| Msa0729720 | Msa0760130 | 0.800529 | 1.381190e-48 | -8.615850e-47 |
| Msa0729720 | Msa0762210 | 0.808093 | 3.667755e-50 | -8.615850e-47 |
| Msa0729720 | Msa0770080 | 0.888214 | 7.199920e-73 | -8.615850e-47 |
| Msa0729720 | Msa0772410 | 0.816946 | 4.255346e-52 | -8.615850e-47 |
| Msa0729720 | Msa0785210 | 0.812261 | 4.633884e-51 | -8.615850e-47 |
| Msa0729720 | Msa0798430 | 0.806996 | 6.269701e-50 | -8.615850e-47 |
| Msa0729720 | Msa0806800 | 0.803276 | 3.766360e-49 | -8.615850e-47 |
| Msa0729720 | Msa0807930 | 0.815261 | 1.012087e-51 | -8.615850e-47 |
| Msa0729720 | Msa0810220 | 0.814386 | 1.581759e-51 | -8.615850e-47 |
| Msa0729720 | Msa0820770 | 0.848658 | 5.328242e-60 | -8.615850e-47 |
| Msa0729720 | Msa0820850 | 0.801143 | 1.034744e-48 | -8.615850e-47 |
| Msa0729720 | Msa0821760 | 0.808999 | 2.350228e-50 | -8.615850e-47 |
| Msa0729720 | Msa0822870 | 0.823767 | 1.160082e-53 | -8.615850e-47 |
| Msa0729720 | Msa0826130 | 0.811933 | 5.463857e-51 | -8.615850e-47 |
| Msa0729720 | Msa0832340 | 0.849817 | 2.534693e-60 | -8.615850e-47 |
| Msa0729720 | Msa0835280 | 0.809374 | 1.953313e-50 | -8.615850e-47 |
| Msa0729720 | Msa0838580 | 0.812666 | 3.779101e-51 | -8.615850e-47 |
| Msa0729720 | Msa0841340 | 0.808311 | 3.296914e-50 | -8.615850e-47 |
| Msa0729720 | Msa0843780 | -0.809205 | 2.123061e-50 | -8.615850e-47 |
| Msa0729720 | Msa0844490 | 0.815235 | 1.025740e-51 | -8.615850e-47 |
| Msa0729720 | Msa0844570 | 0.800743 | 1.248949e-48 | -8.615850e-47 |
| Msa0729720 | Msa0847770 | 0.810951 | 8.927578e-51 | -8.615850e-47 |
| Msa0729720 | Msa0849100 | 0.863905 | 1.782506e-64 | -8.615850e-47 |
| Msa0729720 | Msa0861090 | 0.850814 | 1.330771e-60 | -8.615850e-47 |
| Msa0729720 | Msa0861130 | 0.800808 | 1.211548e-48 | -8.615850e-47 |
| Msa0729720 | Msa0861870 | 0.835892 | 1.288147e-56 | -8.615850e-47 |
| Msa0729720 | Msa0866270 | 0.814682 | 1.360462e-51 | -8.615850e-47 |
| Msa0729720 | Msa0875290 | 0.805036 | 1.620061e-49 | -8.615850e-47 |
| Msa0729720 | Msa0876190 | 0.839161 | 1.869958e-57 | -8.615850e-47 |
| Msa0729720 | Msa0878290 | 0.803868 | 2.837960e-49 | -8.615850e-47 |
| Msa0729720 | Msa0880140 | 0.841882 | 3.628205e-58 | -8.615850e-47 |
| Msa0729720 | Msa0881460 | 0.807594 | 4.683694e-50 | -8.615850e-47 |
| Msa0729720 | Msa0884410 | -0.803950 | 2.729840e-49 | -8.615850e-47 |
| Msa0729720 | Msa0896220 | 0.810089 | 1.371025e-50 | -8.615850e-47 |
| Msa0729720 | Msa0933230 | 0.808518 | 2.977042e-50 | -8.615850e-47 |
| Msa0729720 | Msa0934890 | 0.800188 | 1.620616e-48 | -8.615850e-47 |
| Msa0729720 | Msa0945110 | 0.810345 | 1.206982e-50 | -8.615850e-47 |
| Msa0729720 | Msa0947660 | 0.815305 | 9.896711e-52 | -8.615850e-47 |
| Msa0729720 | Msa0958360 | 0.804849 | 1.773323e-49 | -8.615850e-47 |
| Msa0729720 | Msa0963270 | 0.836005 | 1.205473e-56 | -8.615850e-47 |
| Msa0729720 | Msa0967380 | 0.802896 | 4.513263e-49 | -8.615850e-47 |
| Msa0729720 | Msa0968680 | 0.803612 | 3.207565e-49 | -8.615850e-47 |
| Msa0729720 | Msa0969520 | 0.835462 | 1.654621e-56 | -8.615850e-47 |
| Msa0729720 | Msa0969810 | 0.805022 | 1.631096e-49 | -8.615850e-47 |
| Msa0729720 | Msa0971090 | 0.802476 | 5.509756e-49 | -8.615850e-47 |
| Msa0729720 | Msa0972100 | 0.819373 | 1.201952e-52 | -8.615850e-47 |
| Msa0729720 | Msa0980880 | 0.820786 | 5.704677e-53 | -8.615850e-47 |
| Msa0729720 | Msa0992020 | 0.818614 | 1.787809e-52 | -8.615850e-47 |
| Msa0729720 | Msa0993290 | 0.811140 | 8.123596e-51 | -8.615850e-47 |
| Msa0729720 | Msa0993600 | 0.807854 | 4.125180e-50 | -8.615850e-47 |
| Msa0729720 | Msa0993730 | 0.815647 | 8.304306e-52 | -8.615850e-47 |
| Msa0729720 | Msa0993750 | 0.808861 | 2.515265e-50 | -8.615850e-47 |
| Msa0729720 | Msa0997970 | 0.809300 | 2.025469e-50 | -8.615850e-47 |
| Msa0729720 | Msa1004010 | 0.801337 | 9.443996e-49 | -8.615850e-47 |
| Msa0729720 | Msa1004550 | 0.826900 | 2.104324e-54 | -8.615850e-47 |
| Msa0729720 | Msa1004600 | 0.818101 | 2.336148e-52 | -8.615850e-47 |
| Msa0729720 | Msa1005870 | 0.828206 | 1.022705e-54 | -8.615850e-47 |
| Msa0729720 | Msa1012790 | 0.808046 | 3.753750e-50 | -8.615850e-47 |
| Msa0729720 | Msa1019000 | 0.809035 | 2.308085e-50 | -8.615850e-47 |
| Msa0729720 | Msa1023920 | 0.809128 | 2.205085e-50 | -8.615850e-47 |
| Msa0729720 | Msa1043370 | 0.808527 | 2.964864e-50 | -8.615850e-47 |
| Msa0729720 | Msa1045200 | 0.813186 | 2.907262e-51 | -8.615850e-47 |
| Msa0729720 | Msa1046280 | 0.800624 | 1.320765e-48 | -8.615850e-47 |
| Msa0729720 | Msa1047980 | 0.820178 | 7.868827e-53 | -8.615850e-47 |
| Msa0729720 | Msa1064710 | 0.803699 | 3.076941e-49 | -8.615850e-47 |
| Msa0729720 | Msa1075220 | -0.812590 | 3.926534e-51 | -8.615850e-47 |
| Msa0729720 | Msa1075540 | 0.803928 | 2.758831e-49 | -8.615850e-47 |
| Msa0729720 | Msa1078170 | 0.811739 | 6.021774e-51 | -8.615850e-47 |
| Msa0729720 | Msa1085200 | 0.857026 | 2.160315e-62 | -8.615850e-47 |
| Msa0729720 | Msa1092010 | 0.824752 | 6.806286e-54 | -8.615850e-47 |
| Msa0729720 | Msa1093840 | 0.808781 | 2.616287e-50 | -8.615850e-47 |
| Msa0729720 | Msa1096970 | 0.807539 | 4.812169e-50 | -8.615850e-47 |
| Msa0729720 | Msa1101090 | 0.804535 | 2.062202e-49 | -8.615850e-47 |
| Msa0729720 | Msa1107900 | 0.808564 | 2.911420e-50 | -8.615850e-47 |
| Msa0729720 | Msa1113170 | 0.800496 | 1.402609e-48 | -8.615850e-47 |
| Msa0729720 | Msa1115100 | 0.806824 | 6.819462e-50 | -8.615850e-47 |
| Msa0729720 | Msa1124110 | 0.816794 | 4.602471e-52 | -8.615850e-47 |
| Msa0729720 | Msa1125000 | 0.813828 | 2.100414e-51 | -8.615850e-47 |
| Msa0729720 | Msa1128600 | 0.802347 | 5.857728e-49 | -8.615850e-47 |
| Msa0729720 | Msa1134110 | 0.813653 | 2.295063e-51 | -8.615850e-47 |
| Msa0729720 | Msa1135390 | 0.802419 | 5.661876e-49 | -8.615850e-47 |
| Msa0729720 | Msa1135470 | 0.817490 | 3.209145e-52 | -8.615850e-47 |
| Msa0729720 | Msa1137570 | 0.847617 | 1.032796e-59 | -8.615850e-47 |
| Msa0729720 | Msa1140210 | 0.825841 | 3.762613e-54 | -8.615850e-47 |
| Msa0729720 | Msa1151910 | 0.823200 | 1.574003e-53 | -8.615850e-47 |
| Msa0729720 | Msa1154030 | 0.801378 | 9.263103e-49 | -8.615850e-47 |
| Msa0729720 | Msa1157870 | 0.803951 | 2.728222e-49 | -8.615850e-47 |
| Msa0729720 | Msa1162550 | -0.813062 | 3.095360e-51 | -8.615850e-47 |
| Msa0729720 | Msa1163650 | -0.814887 | 1.225344e-51 | -8.615850e-47 |
| Msa0729720 | Msa1168160 | 0.800813 | 1.208627e-48 | -8.615850e-47 |
| Msa0729720 | Msa1169550 | 0.802005 | 6.886310e-49 | -8.615850e-47 |
| Msa0729720 | Msa1173100 | 0.839253 | 1.769390e-57 | -8.615850e-47 |
| Msa0729720 | Msa1188710 | 0.803051 | 4.192177e-49 | -8.615850e-47 |
| Msa0729720 | Msa1189070 | 0.839320 | 1.700783e-57 | -8.615850e-47 |
| Msa0729720 | Msa1193290 | 0.823736 | 1.179786e-53 | -8.615850e-47 |
| Msa0729720 | Msa1199570 | 0.804879 | 1.748033e-49 | -8.615850e-47 |
| Msa0729720 | Msa1199990 | 0.817711 | 2.862612e-52 | -8.615850e-47 |
| Msa0729720 | Msa1210020 | 0.806632 | 7.485255e-50 | -8.615850e-47 |
| Msa0729720 | Msa1236100 | 0.806244 | 9.036006e-50 | -8.615850e-47 |
| Msa0729720 | Msa1243490 | 0.804776 | 1.836061e-49 | -8.615850e-47 |
| Msa0729720 | Msa1244600 | 0.813859 | 2.068291e-51 | -8.615850e-47 |
| Msa0729720 | Msa1244610 | 0.811539 | 6.657002e-51 | -8.615850e-47 |
| Msa0729720 | Msa1246450 | 0.807013 | 6.219887e-50 | -8.615850e-47 |
| Msa0729720 | Msa1250530 | 0.819106 | 1.382051e-52 | -8.615850e-47 |
| Msa0729720 | Msa1252140 | 0.803137 | 4.024836e-49 | -8.615850e-47 |
| Msa0729720 | Msa1253020 | 0.837890 | 3.980209e-57 | -8.615850e-47 |
| Msa0729720 | Msa1255190 | 0.826617 | 2.459299e-54 | -8.615850e-47 |
| Msa0729720 | Msa1256470 | 0.818171 | 2.252693e-52 | -8.615850e-47 |
| Msa0729720 | Msa1274520 | 0.800313 | 1.528548e-48 | -8.615850e-47 |
| Msa0729720 | Msa1275360 | 0.801770 | 7.696013e-49 | -8.615850e-47 |
| Msa0729720 | Msa1276660 | 0.815274 | 1.005261e-51 | -8.615850e-47 |
| Msa0729720 | Msa1279400 | 0.824910 | 6.248933e-54 | -8.615850e-47 |
| Msa0729720 | Msa1284040 | 0.800563 | 1.359363e-48 | -8.615850e-47 |
| Msa0729720 | Msa1284550 | 0.843820 | 1.107746e-58 | -8.615850e-47 |
| Msa0729720 | Msa1284680 | 0.810435 | 1.154558e-50 | -8.615850e-47 |
| Msa0729720 | Msa1286800 | 0.835364 | 1.751528e-56 | -8.615850e-47 |
| Msa0729720 | Msa1287190 | 0.807820 | 4.193256e-50 | -8.615850e-47 |
| Msa0729720 | Msa1287220 | 0.820583 | 6.354149e-53 | -8.615850e-47 |
| Msa0729720 | Msa1293510 | 0.802377 | 5.773663e-49 | -8.615850e-47 |
| Msa0729720 | Msa1295630 | 0.804086 | 2.556949e-49 | -8.615850e-47 |
| Msa0729720 | Msa1299950 | 0.807142 | 5.840597e-50 | -8.615850e-47 |
| Msa0729720 | Msa1303250 | 0.810497 | 1.119530e-50 | -8.615850e-47 |
| Msa0729720 | Msa1306860 | 0.802406 | 5.695996e-49 | -8.615850e-47 |
| Msa0729720 | Msa1310770 | -0.802298 | 5.993964e-49 | -8.615850e-47 |
| Msa0729720 | Msa1313320 | 0.804710 | 1.895576e-49 | -8.615850e-47 |
| Msa0729720 | Msa1323050 | 0.810757 | 9.835378e-51 | -8.615850e-47 |
| Msa0729720 | Msa1324500 | 0.826931 | 2.069381e-54 | -8.615850e-47 |
| Msa0729720 | Msa1328710 | 0.814256 | 1.690092e-51 | -8.615850e-47 |
| Msa0729720 | Msa1340650 | 0.806535 | 7.845870e-50 | -8.615850e-47 |
| Msa0729720 | Msa1346370 | 0.808386 | 3.176681e-50 | -8.615850e-47 |
| Msa0729720 | Msa1353460 | 0.830215 | 3.328445e-55 | -8.615850e-47 |
| Msa0729720 | Msa1353470 | 0.840629 | 7.748786e-58 | -8.615850e-47 |
| Msa0729720 | Msa1353980 | 0.812377 | 4.371863e-51 | -8.615850e-47 |
| Msa0729720 | Msa1357890 | 0.805749 | 1.148567e-49 | -8.615850e-47 |
| Msa0729720 | Msa1360440 | 0.829034 | 6.449320e-55 | -8.615850e-47 |
| Msa0729720 | Msa1367590 | 0.832729 | 8.005651e-56 | -8.615850e-47 |
| Msa0729720 | Msa1370070 | -0.833871 | 4.156517e-56 | -8.615850e-47 |
| Msa0729720 | Msa1372760 | 0.814551 | 1.454622e-51 | -8.615850e-47 |
| Msa0729720 | Msa1374040 | 0.802591 | 5.217988e-49 | -8.615850e-47 |
| Msa0729720 | Msa1374550 | 0.813092 | 3.048794e-51 | -8.615850e-47 |
| Msa0729720 | Msa1375560 | 0.811698 | 6.147791e-51 | -8.615850e-47 |
| Msa0729720 | Msa1382540 | 0.826159 | 3.160241e-54 | -8.615850e-47 |
| Msa0729720 | Msa1394500 | 0.801939 | 7.106870e-49 | -8.615850e-47 |
| Msa0729720 | Msa1398090 | 0.809964 | 1.458109e-50 | -8.615850e-47 |
| Msa0729720 | Msa1409880 | 0.808275 | 3.354784e-50 | -8.615850e-47 |
| Msa0729720 | Msa1411700 | 0.809556 | 1.784696e-50 | -8.615850e-47 |
| Msa0729720 | Msa1422580 | 0.836223 | 1.061419e-56 | -8.615850e-47 |
| Msa0729720 | Msa1433390 | 0.813850 | 2.076760e-51 | -8.615850e-47 |
| Msa0729720 | Msa1435270 | 0.811623 | 6.381685e-51 | -8.615850e-47 |
| Msa0729720 | Msa1448640 | 0.807666 | 4.520744e-50 | -8.615850e-47 |
| Msa0729720 | Msa1451160 | 0.820111 | 8.150950e-53 | -8.615850e-47 |
| Msa0729720 | Msa1451550 | 0.817096 | 3.935840e-52 | -8.615850e-47 |
| Msa0729720 | Msa1452240 | 0.832180 | 1.095181e-55 | -8.615850e-47 |
| Msa0729720 | Msa1458610 | 0.827027 | 1.962380e-54 | -8.615850e-47 |
| Msa0729720 | Msa1461300 | 0.815162 | 1.064764e-51 | -8.615850e-47 |
| Msa0729720 | Msa1465300 | 0.862219 | 5.916747e-64 | -8.615850e-47 |
| Msa0729720 | Msa1466540 | 0.805051 | 1.608668e-49 | -8.615850e-47 |
| Msa0124060 | Msa0729720 | 0.802901 | 4.501590e-49 | -8.615850e-47 |
| Msa0126920 | Msa0729720 | -0.801802 | 7.583466e-49 | -8.615850e-47 |
| Msa0127650 | Msa0729720 | 0.801298 | 9.619434e-49 | -8.615850e-47 |
| Msa0127800 | Msa0729720 | 0.812417 | 4.284936e-51 | -8.615850e-47 |
| Msa0137840 | Msa0729720 | 0.803753 | 2.998837e-49 | -8.615850e-47 |
| Msa0140780 | Msa0729720 | 0.807645 | 4.569019e-50 | -8.615850e-47 |
| Msa0145580 | Msa0729720 | 0.828316 | 9.619787e-55 | -8.615850e-47 |
| Msa0148100 | Msa0729720 | 0.812655 | 3.801152e-51 | -8.615850e-47 |
| Msa0152400 | Msa0729720 | 0.800842 | 1.191887e-48 | -8.615850e-47 |
| Msa0157290 | Msa0729720 | 0.848532 | 5.774235e-60 | -8.615850e-47 |
| Msa0168500 | Msa0729720 | 0.808343 | 3.245013e-50 | -8.615850e-47 |
| Msa0171290 | Msa0729720 | 0.810660 | 1.032357e-50 | -8.615850e-47 |
| Msa0182620 | Msa0729720 | -0.800245 | 1.577337e-48 | -8.615850e-47 |
| Msa0184040 | Msa0729720 | 0.809991 | 1.439212e-50 | -8.615850e-47 |
| Msa0195630 | Msa0729720 | 0.837866 | 4.036324e-57 | -8.615850e-47 |
| Msa0195980 | Msa0729720 | 0.824125 | 9.560224e-54 | -8.615850e-47 |
| Msa0200260 | Msa0729720 | 0.809482 | 1.851865e-50 | -8.615850e-47 |
| Msa0204960 | Msa0729720 | 0.813802 | 2.128481e-51 | -8.615850e-47 |
| Msa0205510 | Msa0729720 | 0.815520 | 8.865461e-52 | -8.615850e-47 |
| Msa0209350 | Msa0729720 | 0.804613 | 1.986285e-49 | -8.615850e-47 |
| Msa0211150 | Msa0729720 | 0.831908 | 1.278365e-55 | -8.615850e-47 |
| Msa0212990 | Msa0729720 | 0.800211 | 1.603141e-48 | -8.615850e-47 |
| Msa0214550 | Msa0729720 | 0.803680 | 3.105015e-49 | -8.615850e-47 |
| Msa0216240 | Msa0729720 | 0.802270 | 6.075336e-49 | -8.615850e-47 |
| Msa0218780 | Msa0729720 | 0.805729 | 1.159624e-49 | -8.615850e-47 |
| Msa0218810 | Msa0729720 | 0.810858 | 9.352105e-51 | -8.615850e-47 |
| Msa0220250 | Msa0729720 | 0.810861 | 9.338194e-51 | -8.615850e-47 |
| Msa0220740 | Msa0729720 | 0.826331 | 2.876021e-54 | -8.615850e-47 |
| Msa0224780 | Msa0729720 | 0.824309 | 8.655827e-54 | -8.615850e-47 |
| Msa0231980 | Msa0729720 | 0.814189 | 1.748409e-51 | -8.615850e-47 |
| Msa0232050 | Msa0729720 | 0.818805 | 1.618226e-52 | -8.615850e-47 |
| Msa0236510 | Msa0729720 | -0.806446 | 8.194156e-50 | -8.615850e-47 |
| Msa0237410 | Msa0729720 | 0.834943 | 2.236984e-56 | -8.615850e-47 |
| Msa0367870 | Msa0729720 | 0.802789 | 4.748147e-49 | -8.615850e-47 |
| Msa0376300 | Msa0729720 | 0.804208 | 2.412296e-49 | -8.615850e-47 |
| Msa0376310 | Msa0729720 | 0.819905 | 9.086117e-53 | -8.615850e-47 |
| Msa0376350 | Msa0729720 | 0.820089 | 8.247174e-53 | -8.615850e-47 |
| Msa0379640 | Msa0729720 | 0.801128 | 1.041865e-48 | -8.615850e-47 |
| Msa0388960 | Msa0729720 | 0.801521 | 8.656750e-49 | -8.615850e-47 |
| Msa0390400 | Msa0729720 | -0.816878 | 4.405883e-52 | -8.615850e-47 |
| Msa0391430 | Msa0729720 | 0.802117 | 6.532616e-49 | -8.615850e-47 |
| Msa0393080 | Msa0729720 | 0.824529 | 7.685157e-54 | -8.615850e-47 |
| Msa0395790 | Msa0729720 | 0.802503 | 5.439868e-49 | -8.615850e-47 |
| Msa0395820 | Msa0729720 | 0.806419 | 8.303953e-50 | -8.615850e-47 |
| Msa0405570 | Msa0729720 | 0.802934 | 4.431594e-49 | -8.615850e-47 |
| Msa0410650 | Msa0729720 | 0.850151 | 2.043968e-60 | -8.615850e-47 |
| Msa0416300 | Msa0729720 | 0.802013 | 6.862326e-49 | -8.615850e-47 |
| Msa0417270 | Msa0729720 | 0.805884 | 1.076227e-49 | -8.615850e-47 |
| Msa0422850 | Msa0729720 | 0.848558 | 5.676823e-60 | -8.615850e-47 |
| Msa0422930 | Msa0729720 | 0.849449 | 3.210123e-60 | -8.615850e-47 |
| Msa0424790 | Msa0729720 | 0.807195 | 5.691864e-50 | -8.615850e-47 |
| Msa0428590 | Msa0729720 | 0.804378 | 2.223138e-49 | -8.615850e-47 |
| Msa0428930 | Msa0729720 | 0.800270 | 1.559380e-48 | -8.615850e-47 |
| Msa0436490 | Msa0729720 | -0.804949 | 1.689692e-49 | -8.615850e-47 |
| Msa0440750 | Msa0729720 | 0.841001 | 6.191137e-58 | -8.615850e-47 |
| Msa0453350 | Msa0729720 | 0.831679 | 1.455809e-55 | -8.615850e-47 |
| Msa0453680 | Msa0729720 | 0.806056 | 9.902594e-50 | -8.615850e-47 |
| Msa0464680 | Msa0729720 | 0.812717 | 3.683979e-51 | -8.615850e-47 |
| Msa0467060 | Msa0729720 | 0.800246 | 1.576590e-48 | -8.615850e-47 |
| Msa0471550 | Msa0729720 | 0.804414 | 2.184780e-49 | -8.615850e-47 |
| Msa0471580 | Msa0729720 | 0.806376 | 8.477005e-50 | -8.615850e-47 |
| Msa0479170 | Msa0729720 | 0.809597 | 1.748949e-50 | -8.615850e-47 |
| Msa0479970 | Msa0729720 | 0.809224 | 2.102704e-50 | -8.615850e-47 |
| Msa0243100 | Msa0729720 | 0.807648 | 4.562230e-50 | -8.615850e-47 |
| Msa0244960 | Msa0729720 | 0.824870 | 6.384250e-54 | -8.615850e-47 |
| Msa0249860 | Msa0729720 | 0.823151 | 1.616107e-53 | -8.615850e-47 |
| Msa0257460 | Msa0729720 | 0.815730 | 7.958827e-52 | -8.615850e-47 |
| Msa0258310 | Msa0729720 | 0.804950 | 1.688910e-49 | -8.615850e-47 |
| Msa0259500 | Msa0729720 | 0.846181 | 2.552697e-59 | -8.615850e-47 |
| Msa0261550 | Msa0729720 | 0.823496 | 1.342740e-53 | -8.615850e-47 |
| Msa0276630 | Msa0729720 | 0.805810 | 1.115432e-49 | -8.615850e-47 |
| Msa0277850 | Msa0729720 | 0.800770 | 1.232974e-48 | -8.615850e-47 |
| Msa0281530 | Msa0729720 | 0.806482 | 8.050091e-50 | -8.615850e-47 |
| Msa0282250 | Msa0729720 | 0.808493 | 3.014127e-50 | -8.615850e-47 |
| Msa0287650 | Msa0729720 | 0.831580 | 1.539685e-55 | -8.615850e-47 |
| Msa0296740 | Msa0729720 | 0.801538 | 8.589050e-49 | -8.615850e-47 |
| Msa0297790 | Msa0729720 | 0.802820 | 4.679683e-49 | -8.615850e-47 |
| Msa0300690 | Msa0729720 | 0.828794 | 7.373033e-55 | -8.615850e-47 |
| Msa0304510 | Msa0729720 | 0.829977 | 3.806075e-55 | -8.615850e-47 |
| Msa0305700 | Msa0729720 | 0.828296 | 9.729251e-55 | -8.615850e-47 |
| Msa0306210 | Msa0729720 | -0.813294 | 2.752408e-51 | -8.615850e-47 |
| Msa0311700 | Msa0729720 | 0.801569 | 8.465888e-49 | -8.615850e-47 |
| Msa0326480 | Msa0729720 | 0.806653 | 7.411707e-50 | -8.615850e-47 |
| Msa0334360 | Msa0729720 | 0.824457 | 7.988486e-54 | -8.615850e-47 |
| Msa0335800 | Msa0729720 | 0.806583 | 7.664829e-50 | -8.615850e-47 |
| Msa0341540 | Msa0729720 | 0.842419 | 2.616644e-58 | -8.615850e-47 |
| Msa0342310 | Msa0729720 | 0.817320 | 3.506215e-52 | -8.615850e-47 |
| Msa0343850 | Msa0729720 | 0.831956 | 1.243843e-55 | -8.615850e-47 |
| Msa0345970 | Msa0729720 | 0.827137 | 1.847194e-54 | -8.615850e-47 |
| Msa0357290 | Msa0729720 | 0.801175 | 1.019099e-48 | -8.615850e-47 |
| Msa0357340 | Msa0729720 | 0.805886 | 1.074903e-49 | -8.615850e-47 |
| Msa0359030 | Msa0729720 | 0.807317 | 5.363366e-50 | -8.615850e-47 |
| Msa0488560 | Msa0729720 | 0.813203 | 2.882387e-51 | -8.615850e-47 |
| Msa0495320 | Msa0729720 | 0.810458 | 1.141354e-50 | -8.615850e-47 |
| Msa0507680 | Msa0729720 | 0.846470 | 2.128706e-59 | -8.615850e-47 |
| Msa0516170 | Msa0729720 | 0.814410 | 1.562976e-51 | -8.615850e-47 |
| Msa0516440 | Msa0729720 | 0.806421 | 8.295601e-50 | -8.615850e-47 |
| Msa0523460 | Msa0729720 | 0.843610 | 1.260691e-58 | -8.615850e-47 |
| Msa0524500 | Msa0729720 | 0.819371 | 1.203072e-52 | -8.615850e-47 |
| Msa0529040 | Msa0729720 | 0.800582 | 1.347144e-48 | -8.615850e-47 |
| Msa0547160 | Msa0729720 | 0.813259 | 2.802820e-51 | -8.615850e-47 |
| Msa0547890 | Msa0729720 | 0.862698 | 4.214240e-64 | -8.615850e-47 |
| Msa0556060 | Msa0729720 | 0.820404 | 6.982419e-53 | -8.615850e-47 |
| Msa0574890 | Msa0729720 | 0.834573 | 2.771856e-56 | -8.615850e-47 |
| Msa0589510 | Msa0729720 | 0.812994 | 3.203663e-51 | -8.615850e-47 |
| Msa0594660 | Msa0729720 | 0.821566 | 3.771909e-53 | -8.615850e-47 |
| Msa0600430 | Msa0729720 | 0.815231 | 1.027728e-51 | -8.615850e-47 |
| Msa0602460 | Msa0729720 | 0.800489 | 1.407260e-48 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0729720 | MtrunA17_Chr5g0422761 | 94.041 | 386 | 4 | 1 | 1 | 386 | 125 | 491 | 0.0 | 731 |
| Msa0729720 | MtrunA17_Chr1g0210161 | 82.124 | 386 | 47 | 2 | 1 | 386 | 131 | 494 | 0.0 | 635 |
| Msa0729720 | MtrunA17_Chr3g0090051 | 27.523 | 327 | 180 | 8 | 26 | 340 | 262 | 543 | 4.99e-27 | 112 |
| Msa0729720 | MtrunA17_Chr4g0061051 | 70.769 | 65 | 16 | 1 | 322 | 386 | 1 | 62 | 2.75e-24 | 94.7 |
| Msa0729720 | MtrunA17_Chr7g0275761 | 67.692 | 65 | 18 | 1 | 322 | 386 | 1 | 62 | 5.49e-23 | 91.3 |
| Msa0729720 | MtrunA17_Chr6g0460811 | 28.111 | 217 | 146 | 4 | 126 | 340 | 207 | 415 | 1.10e-20 | 93.2 |
| Msa0729720 | MtrunA17_Chr7g0254111 | 30.041 | 243 | 153 | 5 | 126 | 366 | 222 | 449 | 1.35e-20 | 93.2 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0729720 | AT1G25500.2 | 76.267 | 375 | 69 | 2 | 1 | 374 | 131 | 486 | 0.0 | 533 |
| Msa0729720 | AT1G25500.3 | 76.267 | 375 | 69 | 2 | 1 | 374 | 73 | 428 | 0.0 | 533 |
| Msa0729720 | AT1G25500.1 | 75.786 | 318 | 57 | 2 | 1 | 317 | 5 | 303 | 2.75e-164 | 462 |
| Msa0729720 | AT5G13760.1 | 26.984 | 315 | 197 | 4 | 26 | 340 | 252 | 533 | 9.83e-29 | 118 |
| Msa0729720 | AT3G04440.2 | 26.437 | 261 | 173 | 6 | 126 | 380 | 208 | 455 | 1.20e-17 | 84.7 |
| Msa0729720 | AT3G04440.1 | 26.437 | 261 | 173 | 6 | 126 | 380 | 231 | 478 | 1.50e-17 | 84.7 |
| Msa0729720 | AT3G03700.1 | 26.437 | 261 | 173 | 6 | 126 | 380 | 231 | 478 | 1.71e-17 | 84.3 |
Find 100 sgRNAs with CRISPR-Local
Find 254 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TCCTCTCTGTAAGCTTATTT+TGG | 0.132127 | 5_1:+37653048 | Msa0729720:CDS |
| CCCTTGAAGATTGGTGTTTA+TGG | 0.163569 | 5_1:+37653623 | Msa0729720:intron |
| GAGAGTCGCATATGCGTTTA+TGG | 0.163908 | 5_1:+37652804 | Msa0729720:CDS |
| TTATGGCTGTCATGCTCTTA+TGG | 0.229988 | 5_1:+37652821 | Msa0729720:CDS |
| TTTAGTGATTCCTCAAATTT+AGG | 0.231192 | 5_1:-37654497 | None:intergenic |
| GTAGTAGCTTTGAGCTATAT+TGG | 0.258275 | 5_1:+37654668 | Msa0729720:three_prime_UTR |
| TGCAGAACCAACATTGTAAA+TGG | 0.266173 | 5_1:-37652742 | None:intergenic |
| AGTTATCAGCCCACCTAAAA+TGG | 0.267123 | 5_1:-37653753 | None:intergenic |
| CTGGAACTTGCTCTGGTGTT+TGG | 0.293203 | 5_1:+37653774 | Msa0729720:CDS |
| TCCCATCTCTGAATCAATAA+TGG | 0.300289 | 5_1:-37654358 | None:intergenic |
| CATTATTCACAGCTGCTATT+AGG | 0.318508 | 5_1:+37653234 | Msa0729720:CDS |
| TGGAACTTGCTCTGGTGTTT+GGG | 0.323340 | 5_1:+37653775 | Msa0729720:CDS |
| TTTGATTCGTTTCAGATAAG+AGG | 0.327931 | 5_1:+37653354 | Msa0729720:intron |
| CCATTCTTTGGAACTATTCA+AGG | 0.328417 | 5_1:-37654755 | None:intergenic |
| CAAGATAAGTGGTAAGAATA+TGG | 0.340491 | 5_1:-37651066 | None:intergenic |
| CTAACAAGATGCATCAAATA+TGG | 0.340891 | 5_1:+37654696 | Msa0729720:three_prime_UTR |
| TATGCTCATGGGCATGATAT+TGG | 0.343150 | 5_1:+37653844 | Msa0729720:CDS |
| AAATTTGAGGAATCACTAAA+TGG | 0.358261 | 5_1:+37654500 | Msa0729720:exon |
| TGGATGGCATTGTGGTCATT+TGG | 0.361862 | 5_1:+37652841 | Msa0729720:CDS |
| TTCCGCATAACAGATATATA+TGG | 0.362458 | 5_1:-37654332 | None:intergenic |
| TATGCTTTAACAACATCTTT+TGG | 0.373372 | 5_1:+37653194 | Msa0729720:CDS |
| TACAATGTTGGTTCTGCAAA+AGG | 0.380351 | 5_1:+37652747 | Msa0729720:CDS |
| TTCATTCTGTCTGTTCATGT+TGG | 0.384121 | 5_1:+37652943 | Msa0729720:CDS |
| GGTGCAATGTTTCGGAAATC+TGG | 0.390267 | 5_1:-37654396 | None:intergenic |
| CCAGAAAACGCCTAAATTTG+AGG | 0.402709 | 5_1:+37654487 | Msa0729720:exon |
| ACAGTACATGTCATAGTGTC+TGG | 0.405736 | 5_1:+37653092 | Msa0729720:CDS |
| AAGTCGCTGGTGCAATGTTT+CGG | 0.405815 | 5_1:-37654404 | None:intergenic |
| TAGTAGCTTTGAGCTATATT+GGG | 0.407631 | 5_1:+37654669 | Msa0729720:three_prime_UTR |
| TTCAGGTGCTGTGCTGTTGA+TGG | 0.407659 | 5_1:+37653727 | Msa0729720:CDS |
| TTGTGGTCATTTGGAGCTGC+TGG | 0.409399 | 5_1:+37652850 | Msa0729720:CDS |
| CTTGCTCTGGTGTTTGGGCA+TGG | 0.410854 | 5_1:+37653780 | Msa0729720:CDS |
| TTGCGAGGCTGCATCAGTTC+CGG | 0.412997 | 5_1:+37653145 | Msa0729720:CDS |
| GGTGGCTTCTTGTGGTGAGC+TGG | 0.428043 | 5_1:+37652908 | Msa0729720:CDS |
| CCCATCTCTGAATCAATAAT+GGG | 0.437239 | 5_1:-37654357 | None:intergenic |
| CTGATAACTGGAACTTGCTC+TGG | 0.440852 | 5_1:+37653767 | Msa0729720:CDS |
| ACCGTTCTGCTAGAGATGCC+TGG | 0.442652 | 5_1:+37653657 | Msa0729720:CDS |
| TGGGAGTTATTTCAATCAAC+GGG | 0.445833 | 5_1:+37653677 | Msa0729720:CDS |
| AGAGGAATCCGGTCAAAGAT+AGG | 0.447023 | 5_1:+37653372 | Msa0729720:CDS |
| CAGACTTCCATTTACAATGT+TGG | 0.448036 | 5_1:+37652735 | Msa0729720:intron |
| ATACTGTAAAGATTTCATTA+TGG | 0.449302 | 5_1:-37653174 | None:intergenic |
| ATCTTGTGGAGACTCTTGTC+AGG | 0.452670 | 5_1:+37653436 | Msa0729720:CDS |
| CATTCTTGCCTATCTTTGAC+CGG | 0.452929 | 5_1:-37653380 | None:intergenic |
| TCTGTTCATGTTGGATTCGT+TGG | 0.457257 | 5_1:+37652952 | Msa0729720:CDS |
| GGTTGGAGCGGCAATGGTTG+TGG | 0.459158 | 5_1:+37654291 | Msa0729720:intron |
| GTGTTTGGGCATGGATGAAA+TGG | 0.463121 | 5_1:+37653789 | Msa0729720:CDS |
| AATGAAACTAAAAGATGTAA+AGG | 0.463613 | 5_1:-37654572 | None:intergenic |
| CTTGTGGCGTATGATTGTTC+AGG | 0.468254 | 5_1:+37653710 | Msa0729720:CDS |
| CGTTTCAGATAAGAGGAATC+CGG | 0.479860 | 5_1:+37653361 | Msa0729720:intron |
| CCCATTATTGATTCAGAGAT+GGG | 0.480499 | 5_1:+37654357 | Msa0729720:CDS |
| ATATTATATCTGTCATAGAT+AGG | 0.482146 | 5_1:+37651173 | Msa0729720:CDS |
| CTGATTCGTGTTAGTATCCA+TGG | 0.482289 | 5_1:+37653119 | Msa0729720:CDS |
| ATGAAACTAAAAGATGTAAA+GGG | 0.483111 | 5_1:-37654571 | None:intergenic |
| GATTTCATTATGGAGTTAGC+CGG | 0.484194 | 5_1:-37653164 | None:intergenic |
| AGCTCCTATGTTGAAGTCGC+TGG | 0.491841 | 5_1:-37654417 | None:intergenic |
| TGCTATTAGGACACTGCGAT+GGG | 0.492171 | 5_1:+37653247 | Msa0729720:CDS |
| TGGATCTACATCTATGCTCA+TGG | 0.499343 | 5_1:+37653832 | Msa0729720:CDS |
| AACATAGGAGCTCGCGTGCA+AGG | 0.501996 | 5_1:+37654428 | Msa0729720:CDS |
| GAAAATGTGTTTGATGTTGA+GGG | 0.502240 | 5_1:+37654646 | Msa0729720:three_prime_UTR |
| ACCCATTATTGATTCAGAGA+TGG | 0.503313 | 5_1:+37654356 | Msa0729720:CDS |
| AGAAAATGTGTTTGATGTTG+AGG | 0.508848 | 5_1:+37654645 | Msa0729720:three_prime_UTR |
| TCAGGTGCTGTGCTGTTGAT+GGG | 0.509873 | 5_1:+37653728 | Msa0729720:CDS |
| GGCTGTCATGCTCTTATGGA+TGG | 0.510990 | 5_1:+37652825 | Msa0729720:CDS |
| GAGTCTCCACAAGATGGAAA+AGG | 0.511964 | 5_1:-37653428 | None:intergenic |
| GCATGGGCGACGGCGGACGC+TGG | 0.520916 | 5_1:+37652887 | Msa0729720:CDS |
| TCTGCAAAAGGCTGTTAAGA+TGG | 0.525636 | 5_1:+37652759 | Msa0729720:CDS |
| CCGTTCTGCTAGAGATGCCT+GGG | 0.526826 | 5_1:+37653658 | Msa0729720:CDS |
| AAAAGGCTGTTAAGATGGTA+TGG | 0.531876 | 5_1:+37652764 | Msa0729720:CDS |
| TATGCGACTCTCATAACCTC+TGG | 0.532254 | 5_1:-37652793 | None:intergenic |
| ACTTTCATATAGCAACAAGT+TGG | 0.533973 | 5_1:+37654619 | Msa0729720:three_prime_UTR |
| CTGGGAGTTATTTCAATCAA+CGG | 0.546389 | 5_1:+37653676 | Msa0729720:CDS |
| TAACAAGTATGCTTATGTCC+AGG | 0.548708 | 5_1:+37653464 | Msa0729720:CDS |
| CTGCTATTAGGACACTGCGA+TGG | 0.551628 | 5_1:+37653246 | Msa0729720:CDS |
| ACTGATCACAGCAAGATAAG+TGG | 0.552209 | 5_1:-37651077 | None:intergenic |
| TGGGCGACGGCGGACGCTGG+TGG | 0.554770 | 5_1:+37652890 | Msa0729720:CDS |
| TGCTCTTATGGATGGCATTG+TGG | 0.555214 | 5_1:+37652833 | Msa0729720:CDS |
| TGCACCAGCGACTTCAACAT+AGG | 0.555754 | 5_1:+37654413 | Msa0729720:CDS |
| TGACAAGAGTCTCCACAAGA+TGG | 0.562607 | 5_1:-37653434 | None:intergenic |
| TACGAGAATCAAGGTGATCG+TGG | 0.569177 | 5_1:-37654462 | None:intergenic |
| AACGGGAGTTGAAGCACTTG+TGG | 0.573101 | 5_1:+37653694 | Msa0729720:CDS |
| CAGTACATGTCATAGTGTCT+GGG | 0.574385 | 5_1:+37653093 | Msa0729720:CDS |
| GGATCTACATCTATGCTCAT+GGG | 0.586213 | 5_1:+37653833 | Msa0729720:CDS |
| ACATAGGAGCTCGCGTGCAA+GGG | 0.586817 | 5_1:+37654429 | Msa0729720:CDS |
| CGGACGCTGGTGGCTTCTTG+TGG | 0.590851 | 5_1:+37652900 | Msa0729720:CDS |
| GTAGCTTCAAGCATGGGCGA+CGG | 0.591048 | 5_1:+37652877 | Msa0729720:CDS |
| TGGTGTTGTAGCTTCAAGCA+TGG | 0.591952 | 5_1:+37652870 | Msa0729720:CDS |
| TGGAGCGGCAATGGTTGTGG+TGG | 0.610073 | 5_1:+37654294 | Msa0729720:CDS |
| TTTCTGGTATACGAGAATCA+AGG | 0.610752 | 5_1:-37654471 | None:intergenic |
| ATCCATATATATCTGTTATG+CGG | 0.615901 | 5_1:+37654330 | Msa0729720:CDS |
| GGTGTTGTAGCTTCAAGCAT+GGG | 0.620790 | 5_1:+37652871 | Msa0729720:CDS |
| CGTTGATTGAAATAACTCCC+AGG | 0.625002 | 5_1:-37653675 | None:intergenic |
| ATGCAGCCTCGCAACCACCA+TGG | 0.625809 | 5_1:-37653136 | None:intergenic |
| ACGAGAATCAAGGTGATCGT+GGG | 0.626896 | 5_1:-37654461 | None:intergenic |
| GCTTCAAGCATGGGCGACGG+CGG | 0.627340 | 5_1:+37652880 | Msa0729720:CDS |
| CCCAGGCATCTCTAGCAGAA+CGG | 0.629817 | 5_1:-37653658 | None:intergenic |
| AAGGGTTGACATATATATCG+TGG | 0.633356 | 5_1:-37654553 | None:intergenic |
| TATTAGGACACTGCGATGGG+AGG | 0.654899 | 5_1:+37653250 | Msa0729720:CDS |
| TAGTATCCATGGTGGTTGCG+AGG | 0.664174 | 5_1:+37653130 | Msa0729720:CDS |
| GATGGTATGGAATCTTCCAG+AGG | 0.689240 | 5_1:+37652777 | Msa0729720:CDS |
| TCCAAAATAAGCTTACAGAG+AGG | 0.747140 | 5_1:-37653049 | None:intergenic |
| ATTCGTGTTAGTATCCATGG+TGG | 0.768648 | 5_1:+37653122 | Msa0729720:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TTTAAGTAAATAAATTAAAC+AGG | - | chr5_1:37651793-37651812 | None:intergenic | 10.0% |
| !!! | TTTGCTTTATATAATTATTT+TGG | + | chr5_1:37652669-37652688 | Msa0729720:intron | 10.0% |
| !! | TCAAATAAATCAATTCAAAT+AGG | + | chr5_1:37651554-37651573 | Msa0729720:intron | 15.0% |
| !! | TAAATATTTAATCTAATGAG+AGG | + | chr5_1:37651712-37651731 | Msa0729720:intron | 15.0% |
| !! | AATAAATCAATTCATGTATT+GGG | - | chr5_1:37651953-37651972 | None:intergenic | 15.0% |
| !! | TAATAAATCAATTCATGTAT+TGG | - | chr5_1:37651954-37651973 | None:intergenic | 15.0% |
| !!! | AATAGAAATCGTTTAATTTT+TGG | + | chr5_1:37652287-37652306 | Msa0729720:intron | 15.0% |
| !!! | TATGTATTGTAGAATAATTT+TGG | - | chr5_1:37652360-37652379 | None:intergenic | 15.0% |
| !! | ATTATTCTACAATACATATT+TGG | + | chr5_1:37652362-37652381 | Msa0729720:intron | 15.0% |
| !! | ATTATATAAAGCAAATAGAA+GGG | - | chr5_1:37652664-37652683 | None:intergenic | 15.0% |
| !! | AATTATATAAAGCAAATAGA+AGG | - | chr5_1:37652665-37652684 | None:intergenic | 15.0% |
| !! | TCAAAAGTAATAAAAAATCA+AGG | - | chr5_1:37653884-37653903 | None:intergenic | 15.0% |
| !! | ATATTATATCTGTCATAGAT+AGG | + | chr5_1:37651173-37651192 | Msa0729720:CDS | 20.0% |
| !!! | ATTGATGTTATTTTAAGCAT+TGG | + | chr5_1:37651264-37651283 | Msa0729720:intron | 20.0% |
| !! | AAATTAAACAGGTTAAATCA+AGG | - | chr5_1:37651782-37651801 | None:intergenic | 20.0% |
| !! | CAATTACCTAGATATAAATT+AGG | + | chr5_1:37652072-37652091 | Msa0729720:intron | 20.0% |
| !!! | TTTTAAATGAAACTTCTTAC+AGG | - | chr5_1:37652115-37652134 | None:intergenic | 20.0% |
| !!! | TAATAACTTTAGGTTTAGTT+TGG | + | chr5_1:37652154-37652173 | Msa0729720:intron | 20.0% |
| !!! | AATAACTTTAGGTTTAGTTT+GGG | + | chr5_1:37652155-37652174 | Msa0729720:intron | 20.0% |
| !!! | TATTGTAGAATAATTTTGGA+GGG | - | chr5_1:37652356-37652375 | None:intergenic | 20.0% |
| !! | ATACTGTAAAGATTTCATTA+TGG | - | chr5_1:37653177-37653196 | None:intergenic | 20.0% |
| !! | AAAGTAATAAAAAATCAAGG+AGG | - | chr5_1:37653881-37653900 | None:intergenic | 20.0% |
| !!! | TCCTAACAATATAGATATTT+TGG | + | chr5_1:37653904-37653923 | Msa0729720:intron | 20.0% |
| !!! | CCTAACAATATAGATATTTT+GGG | + | chr5_1:37653905-37653924 | Msa0729720:intron | 20.0% |
| !!! | CTAACAATATAGATATTTTG+GGG | + | chr5_1:37653906-37653925 | Msa0729720:intron | 20.0% |
| !! | CTTCTCTAAATTTAGATATT+AGG | - | chr5_1:37654093-37654112 | None:intergenic | 20.0% |
| !! | ATGAAACTAAAAGATGTAAA+GGG | - | chr5_1:37654574-37654593 | None:intergenic | 20.0% |
| !! | AATGAAACTAAAAGATGTAA+AGG | - | chr5_1:37654575-37654594 | None:intergenic | 20.0% |
| ! | CATAAAATGTAGTCTAAGAA+AGG | - | chr5_1:37651210-37651229 | None:intergenic | 25.0% |
| ! | AGAAAACAACATCAAATCAA+AGG | - | chr5_1:37651236-37651255 | None:intergenic | 25.0% |
| ! | ATTACGTTGTTAATACAAAC+AGG | - | chr5_1:37651329-37651348 | None:intergenic | 25.0% |
| !! | ATAACTTGTGAAAGATCATA+AGG | + | chr5_1:37651449-37651468 | Msa0729720:intron | 25.0% |
| !!! | CAAATTTTAAAGAGCAAGAA+AGG | - | chr5_1:37651595-37651614 | None:intergenic | 25.0% |
| ! | AATTTCATGTTCACACAAAA+GGG | - | chr5_1:37651636-37651655 | None:intergenic | 25.0% |
| ! | TATTTAATCTAATGAGAGGT+AGG | + | chr5_1:37651716-37651735 | Msa0729720:intron | 25.0% |
| ! | ATTTAATCTAATGAGAGGTA+GGG | + | chr5_1:37651717-37651736 | Msa0729720:intron | 25.0% |
| ! | GAAATTGAAAGGATTGTATT+AGG | - | chr5_1:37651901-37651920 | None:intergenic | 25.0% |
| !! | AGTTGAATTTTTATAATGCG+TGG | + | chr5_1:37652024-37652043 | Msa0729720:intron | 25.0% |
| ! | AAAATATCACAGTTTGTCTA+TGG | + | chr5_1:37652131-37652150 | Msa0729720:intron | 25.0% |
| ! | TTGTCTATGGTAATAACTTT+AGG | + | chr5_1:37652144-37652163 | Msa0729720:intron | 25.0% |
| !! | TTTGGAGTATTATAACAACA+TGG | + | chr5_1:37652305-37652324 | Msa0729720:intron | 25.0% |
| !! | GTATTGTAGAATAATTTTGG+AGG | - | chr5_1:37652357-37652376 | None:intergenic | 25.0% |
| ! | ATGTTGCGAATATTCTTAAA+AGG | - | chr5_1:37652545-37652564 | None:intergenic | 25.0% |
| !!! | TTTTAAGAATATTCGCAACA+TGG | + | chr5_1:37652544-37652563 | Msa0729720:intron | 25.0% |
| !! | CATGGATACTTTCATTTTAT+TGG | + | chr5_1:37652562-37652581 | Msa0729720:intron | 25.0% |
| !!! | ACTTTCATTTTATTGGTGAT+CGG | + | chr5_1:37652569-37652588 | Msa0729720:intron | 25.0% |
| !! | TATGCTTTAACAACATCTTT+TGG | + | chr5_1:37653194-37653213 | Msa0729720:CDS | 25.0% |
| ! | CCCAAAATATCTATATTGTT+AGG | - | chr5_1:37653908-37653927 | None:intergenic | 25.0% |
| !! | GTAAAACATTTTTACGTTGT+AGG | + | chr5_1:37654013-37654032 | Msa0729720:intron | 25.0% |
| ! | GATATAACGCATACTTAATA+TGG | - | chr5_1:37654194-37654213 | None:intergenic | 25.0% |
| ! | ATCCATATATATCTGTTATG+CGG | + | chr5_1:37654330-37654349 | Msa0729720:CDS | 25.0% |
| ! | TTTAGTGATTCCTCAAATTT+AGG | - | chr5_1:37654500-37654519 | None:intergenic | 25.0% |
| ! | AAATTTGAGGAATCACTAAA+TGG | + | chr5_1:37654500-37654519 | Msa0729720:exon | 25.0% |
| CAAGATAAGTGGTAAGAATA+TGG | - | chr5_1:37651069-37651088 | None:intergenic | 30.0% | |
| !!! | TACATACTTTTGAGACTGTT+TGG | - | chr5_1:37651519-37651538 | None:intergenic | 30.0% |
| CAATTTCATGTTCACACAAA+AGG | - | chr5_1:37651637-37651656 | None:intergenic | 30.0% | |
| TATAGAATAGGATAAGTAGG+TGG | - | chr5_1:37651874-37651893 | None:intergenic | 30.0% | |
| GGATATAGAATAGGATAAGT+AGG | - | chr5_1:37651877-37651896 | None:intergenic | 30.0% | |
| GTATTAGGAGGATATAGAAT+AGG | - | chr5_1:37651886-37651905 | None:intergenic | 30.0% | |
| ATTGAAAGGATTGTATTAGG+AGG | - | chr5_1:37651898-37651917 | None:intergenic | 30.0% | |
| !! | AGATTCTCTCTGAAATTGAA+AGG | - | chr5_1:37651912-37651931 | None:intergenic | 30.0% |
| AGACGTCCTAATTTATATCT+AGG | - | chr5_1:37652081-37652100 | None:intergenic | 30.0% | |
| AATTGCTCTATCAAATAAGG+TGG | - | chr5_1:37652238-37652257 | None:intergenic | 30.0% | |
| ! | CCTTATTTGATAGAGCAATT+CGG | + | chr5_1:37652238-37652257 | Msa0729720:intron | 30.0% |
| AATACAAAATCCCCCTAATT+TGG | - | chr5_1:37652395-37652414 | None:intergenic | 30.0% | |
| AAGAAAAATAAACTCCCCAA+AGG | + | chr5_1:37652418-37652437 | Msa0729720:intron | 30.0% | |
| !! | GTCATTAAGTTGATTTCTGT+TGG | + | chr5_1:37652691-37652710 | Msa0729720:intron | 30.0% |
| CATGAGAAATGAATACGTAA+AGG | - | chr5_1:37653321-37653340 | None:intergenic | 30.0% | |
| ! | TTTGATTCGTTTCAGATAAG+AGG | + | chr5_1:37653354-37653373 | Msa0729720:intron | 30.0% |
| ! | AGTGATAGAGCTTTTATGAT+TGG | + | chr5_1:37653812-37653831 | Msa0729720:CDS | 30.0% |
| ! | ATTCTCACTGTAAAGGTTTT+AGG | - | chr5_1:37653970-37653989 | None:intergenic | 30.0% |
| TGATGTGTATATGGAATGTT+GGG | - | chr5_1:37654121-37654140 | None:intergenic | 30.0% | |
| TTCCGCATAACAGATATATA+TGG | - | chr5_1:37654335-37654354 | None:intergenic | 30.0% | |
| AAATCTGGTTGAAAAACTCA+TGG | - | chr5_1:37654384-37654403 | None:intergenic | 30.0% | |
| ACTTTCATATAGCAACAAGT+TGG | + | chr5_1:37654619-37654638 | Msa0729720:three_prime_UTR | 30.0% | |
| AGAAAATGTGTTTGATGTTG+AGG | + | chr5_1:37654645-37654664 | Msa0729720:three_prime_UTR | 30.0% | |
| GAAAATGTGTTTGATGTTGA+GGG | + | chr5_1:37654646-37654665 | Msa0729720:three_prime_UTR | 30.0% | |
| !! | TAGTAGCTTTGAGCTATATT+GGG | + | chr5_1:37654669-37654688 | Msa0729720:three_prime_UTR | 30.0% |
| CTAACAAGATGCATCAAATA+TGG | + | chr5_1:37654696-37654715 | Msa0729720:three_prime_UTR | 30.0% | |
| ! | TGATCAGTGTTTTGTGTTTC+TGG | + | chr5_1:37651092-37651111 | Msa0729720:CDS | 35.0% |
| ! | GATCAGTGTTTTGTGTTTCT+GGG | + | chr5_1:37651093-37651112 | Msa0729720:CDS | 35.0% |
| ACAGGTTCTCATAACTCTTA+AGG | - | chr5_1:37651311-37651330 | None:intergenic | 35.0% | |
| CAAGAAAGGTAATCAATCTC+TGG | - | chr5_1:37651581-37651600 | None:intergenic | 35.0% | |
| CAAACGTAATGTTCATCTTC+AGG | + | chr5_1:37651821-37651840 | Msa0729720:intron | 35.0% | |
| AGGTGGAGCTGTTAAAATAT+TGG | - | chr5_1:37651857-37651876 | None:intergenic | 35.0% | |
| ATTCATGTATTGGGAACTCA+GGG | - | chr5_1:37651944-37651963 | None:intergenic | 35.0% | |
| AATTCATGTATTGGGAACTC+AGG | - | chr5_1:37651945-37651964 | None:intergenic | 35.0% | |
| !! | TTAGGTTTAGTTTGGGAGTT+TGG | + | chr5_1:37652162-37652181 | Msa0729720:intron | 35.0% |
| CCGAATTGCTCTATCAAATA+AGG | - | chr5_1:37652241-37652260 | None:intergenic | 35.0% | |
| TTCTATGCATCTCCATGAAA+CGG | - | chr5_1:37652511-37652530 | None:intergenic | 35.0% | |
| AAGCAAATAGAAGGGAATGA+AGG | - | chr5_1:37652656-37652675 | None:intergenic | 35.0% | |
| !! | AAGTTGATTTCTGTTGGCTT+TGG | + | chr5_1:37652697-37652716 | Msa0729720:intron | 35.0% |
| CAACATTGTAAATGGAAGTC+TGG | - | chr5_1:37652737-37652756 | None:intergenic | 35.0% | |
| CAGACTTCCATTTACAATGT+TGG | + | chr5_1:37652735-37652754 | Msa0729720:intron | 35.0% | |
| TGCAGAACCAACATTGTAAA+TGG | - | chr5_1:37652745-37652764 | None:intergenic | 35.0% | |
| !! | TACAATGTTGGTTCTGCAAA+AGG | + | chr5_1:37652747-37652766 | Msa0729720:CDS | 35.0% |
| AAAAGGCTGTTAAGATGGTA+TGG | + | chr5_1:37652764-37652783 | Msa0729720:CDS | 35.0% | |
| TTCATTCTGTCTGTTCATGT+TGG | + | chr5_1:37652943-37652962 | Msa0729720:CDS | 35.0% | |
| TCAGCTTATGCTTATCTCAT+TGG | + | chr5_1:37652999-37653018 | Msa0729720:intron | 35.0% | |
| ! | TTGCTATTATGCATGTATGC+AGG | + | chr5_1:37653025-37653044 | Msa0729720:intron | 35.0% |
| ! | TCCTCTCTGTAAGCTTATTT+TGG | + | chr5_1:37653048-37653067 | Msa0729720:CDS | 35.0% |
| TCCAAAATAAGCTTACAGAG+AGG | - | chr5_1:37653052-37653071 | None:intergenic | 35.0% | |
| !!! | TCTGTAAGCTTATTTTGGAC+AGG | + | chr5_1:37653053-37653072 | Msa0729720:CDS | 35.0% |
| GATTTCATTATGGAGTTAGC+CGG | - | chr5_1:37653167-37653186 | None:intergenic | 35.0% | |
| !! | TCTTTTGGCAGCATTTGTTA+TGG | + | chr5_1:37653209-37653228 | Msa0729720:CDS | 35.0% |
| CATTATTCACAGCTGCTATT+AGG | + | chr5_1:37653234-37653253 | Msa0729720:CDS | 35.0% | |
| ! | TGATTTCCTTTTCCATCTTG+TGG | + | chr5_1:37653422-37653441 | Msa0729720:CDS | 35.0% |
| TAACAAGTATGCTTATGTCC+AGG | + | chr5_1:37653464-37653483 | Msa0729720:CDS | 35.0% | |
| TGATTGTTGAGATGCACAAT+GGG | - | chr5_1:37653493-37653512 | None:intergenic | 35.0% | |
| TTGATTGTTGAGATGCACAA+TGG | - | chr5_1:37653494-37653513 | None:intergenic | 35.0% | |
| CCATAAACACCAATCTTCAA+GGG | - | chr5_1:37653626-37653645 | None:intergenic | 35.0% | |
| ACCATAAACACCAATCTTCA+AGG | - | chr5_1:37653627-37653646 | None:intergenic | 35.0% | |
| ! | CTGGGAGTTATTTCAATCAA+CGG | + | chr5_1:37653676-37653695 | Msa0729720:CDS | 35.0% |
| ! | TGGGAGTTATTTCAATCAAC+GGG | + | chr5_1:37653677-37653696 | Msa0729720:CDS | 35.0% |
| AGCACCTATTGTAGAAAAGA+TGG | + | chr5_1:37653930-37653949 | Msa0729720:intron | 35.0% | |
| ACCTATTGTAGAAAAGATGG+TGG | + | chr5_1:37653933-37653952 | Msa0729720:intron | 35.0% | |
| ! | TCCACCATCTTTTCTACAAT+AGG | - | chr5_1:37653937-37653956 | None:intergenic | 35.0% |
| ATCTCTCATTCTCACTGTAA+AGG | - | chr5_1:37653977-37653996 | None:intergenic | 35.0% | |
| TACAGTGAGAATGAGAGATA+TGG | + | chr5_1:37653978-37653997 | Msa0729720:intron | 35.0% | |
| ! | ATTTTTACGTTGTAGGTGCA+TGG | + | chr5_1:37654020-37654039 | Msa0729720:intron | 35.0% |
| TAGATATTAGGACTTCAGAG+AGG | - | chr5_1:37654081-37654100 | None:intergenic | 35.0% | |
| GTGATGTGTATATGGAATGT+TGG | - | chr5_1:37654122-37654141 | None:intergenic | 35.0% | |
| GTTCATTTCCATCACATCTT+AGG | + | chr5_1:37654149-37654168 | Msa0729720:intron | 35.0% | |
| !!! | TGACGTGTGAATTTTTAGGT+TGG | + | chr5_1:37654274-37654293 | Msa0729720:intron | 35.0% |
| !!! | TGTGAATTTTTAGGTTGGAG+CGG | + | chr5_1:37654279-37654298 | Msa0729720:intron | 35.0% |
| !! | ACCCATTATTGATTCAGAGA+TGG | + | chr5_1:37654356-37654375 | Msa0729720:CDS | 35.0% |
| CCCATCTCTGAATCAATAAT+GGG | - | chr5_1:37654360-37654379 | None:intergenic | 35.0% | |
| !! | CCCATTATTGATTCAGAGAT+GGG | + | chr5_1:37654357-37654376 | Msa0729720:CDS | 35.0% |
| TCCCATCTCTGAATCAATAA+TGG | - | chr5_1:37654361-37654380 | None:intergenic | 35.0% | |
| ! | TTTCTGGTATACGAGAATCA+AGG | - | chr5_1:37654474-37654493 | None:intergenic | 35.0% |
| AAGGGTTGACATATATATCG+TGG | - | chr5_1:37654556-37654575 | None:intergenic | 35.0% | |
| !! | GTAGTAGCTTTGAGCTATAT+TGG | + | chr5_1:37654668-37654687 | Msa0729720:three_prime_UTR | 35.0% |
| ACTGATCACAGCAAGATAAG+TGG | - | chr5_1:37651080-37651099 | None:intergenic | 40.0% | |
| !!! | CTTTTGAGACTGTTTGGAAG+AGG | - | chr5_1:37651513-37651532 | None:intergenic | 40.0% |
| !! | GTTTAGTTTGGGAGTTTGGA+GGG | + | chr5_1:37652166-37652185 | Msa0729720:intron | 40.0% |
| !! | TTTAGTTTGGGAGTTTGGAG+GGG | + | chr5_1:37652167-37652186 | Msa0729720:intron | 40.0% |
| ! | ATTTGGAGTCCCACCAAATT+AGG | + | chr5_1:37652379-37652398 | Msa0729720:intron | 40.0% |
| ! | TTTGGAGTCCCACCAAATTA+GGG | + | chr5_1:37652380-37652399 | Msa0729720:intron | 40.0% |
| CAAAATCCCCCTAATTTGGT+GGG | - | chr5_1:37652391-37652410 | None:intergenic | 40.0% | |
| ACAAAATCCCCCTAATTTGG+TGG | - | chr5_1:37652392-37652411 | None:intergenic | 40.0% | |
| TCTGCAAAAGGCTGTTAAGA+TGG | + | chr5_1:37652759-37652778 | Msa0729720:CDS | 40.0% | |
| TTATGGCTGTCATGCTCTTA+TGG | + | chr5_1:37652821-37652840 | Msa0729720:CDS | 40.0% | |
| TCTGTTCATGTTGGATTCGT+TGG | + | chr5_1:37652952-37652971 | Msa0729720:CDS | 40.0% | |
| ! | GGATTCGTTGGTTACGTATA+CGG | + | chr5_1:37652964-37652983 | Msa0729720:intron | 40.0% |
| ACAGTACATGTCATAGTGTC+TGG | + | chr5_1:37653092-37653111 | Msa0729720:CDS | 40.0% | |
| CAGTACATGTCATAGTGTCT+GGG | + | chr5_1:37653093-37653112 | Msa0729720:CDS | 40.0% | |
| ! | CTGATTCGTGTTAGTATCCA+TGG | + | chr5_1:37653119-37653138 | Msa0729720:CDS | 40.0% |
| ATTCGTGTTAGTATCCATGG+TGG | + | chr5_1:37653122-37653141 | Msa0729720:CDS | 40.0% | |
| CGTTTCAGATAAGAGGAATC+CGG | + | chr5_1:37653361-37653380 | Msa0729720:intron | 40.0% | |
| CATTCTTGCCTATCTTTGAC+CGG | - | chr5_1:37653383-37653402 | None:intergenic | 40.0% | |
| ! | CCCTTGAAGATTGGTGTTTA+TGG | + | chr5_1:37653623-37653642 | Msa0729720:intron | 40.0% |
| ! | CGTTGATTGAAATAACTCCC+AGG | - | chr5_1:37653678-37653697 | None:intergenic | 40.0% |
| !! | CTGTTGATGGGAACCATTTT+AGG | + | chr5_1:37653740-37653759 | Msa0729720:CDS | 40.0% |
| ! | TTGATGGGAACCATTTTAGG+TGG | + | chr5_1:37653743-37653762 | Msa0729720:CDS | 40.0% |
| !! | TGATGGGAACCATTTTAGGT+GGG | + | chr5_1:37653744-37653763 | Msa0729720:CDS | 40.0% |
| AGTTATCAGCCCACCTAAAA+TGG | - | chr5_1:37653756-37653775 | None:intergenic | 40.0% | |
| !!! | ATTTTAGGTGGGCTGATAAC+TGG | + | chr5_1:37653755-37653774 | Msa0729720:CDS | 40.0% |
| TGGATCTACATCTATGCTCA+TGG | + | chr5_1:37653832-37653851 | Msa0729720:CDS | 40.0% | |
| GGATCTACATCTATGCTCAT+GGG | + | chr5_1:37653833-37653852 | Msa0729720:CDS | 40.0% | |
| TATGCTCATGGGCATGATAT+TGG | + | chr5_1:37653844-37653863 | Msa0729720:CDS | 40.0% | |
| CCTGAGATGTGATGTGTATA+TGG | - | chr5_1:37654130-37654149 | None:intergenic | 40.0% | |
| CCATATACACATCACATCTC+AGG | + | chr5_1:37654127-37654146 | Msa0729720:intron | 40.0% | |
| CTGAATATGCATCCGAACAT+AGG | + | chr5_1:37654249-37654268 | Msa0729720:intron | 40.0% | |
| ! | GGCATGACGTGTGAATTTTT+AGG | + | chr5_1:37654270-37654289 | Msa0729720:intron | 40.0% |
| ! | CCTCAAATTTAGGCGTTTTC+TGG | - | chr5_1:37654490-37654509 | None:intergenic | 40.0% |
| CCAGAAAACGCCTAAATTTG+AGG | + | chr5_1:37654487-37654506 | Msa0729720:exon | 40.0% | |
| AAGCAACACCCCAGAAAAAC+TGG | - | chr5_1:37651123-37651142 | None:intergenic | 45.0% | |
| !!! | TGGGGTGTTGCTTTTGCTAT+TGG | + | chr5_1:37651130-37651149 | Msa0729720:CDS | 45.0% |
| TGAGACTGTTTGGAAGAGGT+TGG | - | chr5_1:37651509-37651528 | None:intergenic | 45.0% | |
| ! | TGAGAGGTAGGGCTTTTAAG+AGG | + | chr5_1:37651728-37651747 | Msa0729720:intron | 45.0% |
| !! | GGTTTAGTTTGGGAGTTTGG+AGG | + | chr5_1:37652165-37652184 | Msa0729720:intron | 45.0% |
| TTGGAGTCCCACCAAATTAG+GGG | + | chr5_1:37652381-37652400 | Msa0729720:intron | 45.0% | |
| CCATGAAACGGAGACAGTTA+GGG | - | chr5_1:37652499-37652518 | None:intergenic | 45.0% | |
| TCCATGAAACGGAGACAGTT+AGG | - | chr5_1:37652500-37652519 | None:intergenic | 45.0% | |
| GATGGTATGGAATCTTCCAG+AGG | + | chr5_1:37652777-37652796 | Msa0729720:CDS | 45.0% | |
| TATGCGACTCTCATAACCTC+TGG | - | chr5_1:37652796-37652815 | None:intergenic | 45.0% | |
| GAGAGTCGCATATGCGTTTA+TGG | + | chr5_1:37652804-37652823 | Msa0729720:CDS | 45.0% | |
| TGCTCTTATGGATGGCATTG+TGG | + | chr5_1:37652833-37652852 | Msa0729720:CDS | 45.0% | |
| TGGATGGCATTGTGGTCATT+TGG | + | chr5_1:37652841-37652860 | Msa0729720:CDS | 45.0% | |
| !! | TGGTGTTGTAGCTTCAAGCA+TGG | + | chr5_1:37652870-37652889 | Msa0729720:CDS | 45.0% |
| ! | GGTGTTGTAGCTTCAAGCAT+GGG | + | chr5_1:37652871-37652890 | Msa0729720:CDS | 45.0% |
| TGCTATTAGGACACTGCGAT+GGG | + | chr5_1:37653247-37653266 | Msa0729720:CDS | 45.0% | |
| AGAGGAATCCGGTCAAAGAT+AGG | + | chr5_1:37653372-37653391 | Msa0729720:CDS | 45.0% | |
| GAGTCTCCACAAGATGGAAA+AGG | - | chr5_1:37653431-37653450 | None:intergenic | 45.0% | |
| TGACAAGAGTCTCCACAAGA+TGG | - | chr5_1:37653437-37653456 | None:intergenic | 45.0% | |
| ATCTTGTGGAGACTCTTGTC+AGG | + | chr5_1:37653436-37653455 | Msa0729720:CDS | 45.0% | |
| CACCAATCTTCAAGGGACAT+GGG | - | chr5_1:37653619-37653638 | None:intergenic | 45.0% | |
| ACACCAATCTTCAAGGGACA+TGG | - | chr5_1:37653620-37653639 | None:intergenic | 45.0% | |
| CTTGTGGCGTATGATTGTTC+AGG | + | chr5_1:37653710-37653729 | Msa0729720:CDS | 45.0% | |
| ! | CTGATAACTGGAACTTGCTC+TGG | + | chr5_1:37653767-37653786 | Msa0729720:CDS | 45.0% |
| ! | TGGAACTTGCTCTGGTGTTT+GGG | + | chr5_1:37653775-37653794 | Msa0729720:CDS | 45.0% |
| GTGTTTGGGCATGGATGAAA+TGG | + | chr5_1:37653789-37653808 | Msa0729720:CDS | 45.0% | |
| GACATGCACCTAAGATGTGA+TGG | - | chr5_1:37654160-37654179 | None:intergenic | 45.0% | |
| GCATATTCAGCAATGCGAGT+TGG | - | chr5_1:37654239-37654258 | None:intergenic | 45.0% | |
| TCACACGTCATGCCTATGTT+CGG | - | chr5_1:37654264-37654283 | None:intergenic | 45.0% | |
| !!! | TTTTTAGGTTGGAGCGGCAA+TGG | + | chr5_1:37654285-37654304 | Msa0729720:intron | 45.0% |
| GGTGCAATGTTTCGGAAATC+TGG | - | chr5_1:37654399-37654418 | None:intergenic | 45.0% | |
| AAGTCGCTGGTGCAATGTTT+CGG | - | chr5_1:37654407-37654426 | None:intergenic | 45.0% | |
| ACGAGAATCAAGGTGATCGT+GGG | - | chr5_1:37654464-37654483 | None:intergenic | 45.0% | |
| TACGAGAATCAAGGTGATCG+TGG | - | chr5_1:37654465-37654484 | None:intergenic | 45.0% | |
| ! | TCTGGGCTCACCAGTTTTTC+TGG | + | chr5_1:37651110-37651129 | Msa0729720:CDS | 50.0% |
| ! | CTGGGCTCACCAGTTTTTCT+GGG | + | chr5_1:37651111-37651130 | Msa0729720:CDS | 50.0% |
| ! | TGGGCTCACCAGTTTTTCTG+GGG | + | chr5_1:37651112-37651131 | Msa0729720:CDS | 50.0% |
| ! | AAGCGGTGGACTTTGTTGAG+AGG | + | chr5_1:37652194-37652213 | Msa0729720:intron | 50.0% |
| ! | AGCGGTGGACTTTGTTGAGA+GGG | + | chr5_1:37652195-37652214 | Msa0729720:intron | 50.0% |
| TGGAGTCCCACCAAATTAGG+GGG | + | chr5_1:37652382-37652401 | Msa0729720:intron | 50.0% | |
| TGGAAGGAAAGGAGGGCTTT+GGG | - | chr5_1:37652452-37652471 | None:intergenic | 50.0% | |
| GAGGAAGTGGAAGGAAAGGA+GGG | - | chr5_1:37652459-37652478 | None:intergenic | 50.0% | |
| TCAGGAGGAAGTGGAAGGAA+AGG | - | chr5_1:37652463-37652482 | None:intergenic | 50.0% | |
| GAAGTTCAGGAGGAAGTGGA+AGG | - | chr5_1:37652468-37652487 | None:intergenic | 50.0% | |
| TCTGGAAGTTCAGGAGGAAG+TGG | - | chr5_1:37652472-37652491 | None:intergenic | 50.0% | |
| TAGGGTCTGTCTGGAAGTTC+AGG | - | chr5_1:37652481-37652500 | None:intergenic | 50.0% | |
| CCCTAACTGTCTCCGTTTCA+TGG | + | chr5_1:37652496-37652515 | Msa0729720:intron | 50.0% | |
| GGCTGTCATGCTCTTATGGA+TGG | + | chr5_1:37652825-37652844 | Msa0729720:CDS | 50.0% | |
| ! | TTGTGGTCATTTGGAGCTGC+TGG | + | chr5_1:37652850-37652869 | Msa0729720:CDS | 50.0% |
| TAGTATCCATGGTGGTTGCG+AGG | + | chr5_1:37653130-37653149 | Msa0729720:CDS | 50.0% | |
| CTGCTATTAGGACACTGCGA+TGG | + | chr5_1:37653246-37653265 | Msa0729720:CDS | 50.0% | |
| TATTAGGACACTGCGATGGG+AGG | + | chr5_1:37653250-37653269 | Msa0729720:CDS | 50.0% | |
| CTCCCATGTCCCTTGAAGAT+TGG | + | chr5_1:37653614-37653633 | Msa0729720:intron | 50.0% | |
| ! | AACGGGAGTTGAAGCACTTG+TGG | + | chr5_1:37653694-37653713 | Msa0729720:CDS | 50.0% |
| ! | TTCAGGTGCTGTGCTGTTGA+TGG | + | chr5_1:37653727-37653746 | Msa0729720:CDS | 50.0% |
| ! | TCAGGTGCTGTGCTGTTGAT+GGG | + | chr5_1:37653728-37653747 | Msa0729720:CDS | 50.0% |
| ! | CTGGAACTTGCTCTGGTGTT+TGG | + | chr5_1:37653774-37653793 | Msa0729720:CDS | 50.0% |
| TGCACCAGCGACTTCAACAT+AGG | + | chr5_1:37654413-37654432 | Msa0729720:CDS | 50.0% | |
| AGCTCCTATGTTGAAGTCGC+TGG | - | chr5_1:37654420-37654439 | None:intergenic | 50.0% | |
| GTTTGGGAGTTTGGAGGGGT+CGG | + | chr5_1:37652171-37652190 | Msa0729720:intron | 55.0% | |
| TTTGGGAGGGACAGCCTTTG+GGG | - | chr5_1:37652435-37652454 | None:intergenic | 55.0% | |
| ! | CTTTGGGAGGGACAGCCTTT+GGG | - | chr5_1:37652436-37652455 | None:intergenic | 55.0% |
| !! | AGGAAAGGAGGGCTTTGGGA+GGG | - | chr5_1:37652448-37652467 | None:intergenic | 55.0% |
| !! | AAGGAAAGGAGGGCTTTGGG+AGG | - | chr5_1:37652449-37652468 | None:intergenic | 55.0% |
| GTGGAAGGAAAGGAGGGCTT+TGG | - | chr5_1:37652453-37652472 | None:intergenic | 55.0% | |
| GGAGGAAGTGGAAGGAAAGG+AGG | - | chr5_1:37652460-37652479 | None:intergenic | 55.0% | |
| GGTCTGTCTGGAAGTTCAGG+AGG | - | chr5_1:37652478-37652497 | None:intergenic | 55.0% | |
| GGAGACAGTTAGGGTCTGTC+TGG | - | chr5_1:37652490-37652509 | None:intergenic | 55.0% | |
| GTAGCTTCAAGCATGGGCGA+CGG | + | chr5_1:37652877-37652896 | Msa0729720:CDS | 55.0% | |
| TTGCGAGGCTGCATCAGTTC+CGG | + | chr5_1:37653145-37653164 | Msa0729720:CDS | 55.0% | |
| !! | GAGATGCACAATGGGCTACC+TGG | - | chr5_1:37653485-37653504 | None:intergenic | 55.0% |
| ACCGTTCTGCTAGAGATGCC+TGG | + | chr5_1:37653657-37653676 | Msa0729720:CDS | 55.0% | |
| CCCAGGCATCTCTAGCAGAA+CGG | - | chr5_1:37653661-37653680 | None:intergenic | 55.0% | |
| CCGTTCTGCTAGAGATGCCT+GGG | + | chr5_1:37653658-37653677 | Msa0729720:CDS | 55.0% | |
| CTTGCTCTGGTGTTTGGGCA+TGG | + | chr5_1:37653780-37653799 | Msa0729720:CDS | 55.0% | |
| AACATAGGAGCTCGCGTGCA+AGG | + | chr5_1:37654428-37654447 | Msa0729720:CDS | 55.0% | |
| ACATAGGAGCTCGCGTGCAA+GGG | + | chr5_1:37654429-37654448 | Msa0729720:CDS | 55.0% | |
| GAGTTTGGAGGGGTCGGAAG+CGG | + | chr5_1:37652177-37652196 | Msa0729720:intron | 60.0% | |
| !! | GCTTTGGGAGGGACAGCCTT+TGG | - | chr5_1:37652437-37652456 | None:intergenic | 60.0% |
| GGTGGCTTCTTGTGGTGAGC+TGG | + | chr5_1:37652908-37652927 | Msa0729720:CDS | 60.0% | |
| ATGCAGCCTCGCAACCACCA+TGG | - | chr5_1:37653139-37653158 | None:intergenic | 60.0% | |
| GGTTGGAGCGGCAATGGTTG+TGG | + | chr5_1:37654291-37654310 | Msa0729720:intron | 60.0% | |
| TGGAGCGGCAATGGTTGTGG+TGG | + | chr5_1:37654294-37654313 | Msa0729720:CDS | 60.0% | |
| TTTGGAGGGGTCGGAAGCGG+TGG | + | chr5_1:37652180-37652199 | Msa0729720:intron | 65.0% | |
| GCTTCAAGCATGGGCGACGG+CGG | + | chr5_1:37652880-37652899 | Msa0729720:CDS | 65.0% | |
| CGGACGCTGGTGGCTTCTTG+TGG | + | chr5_1:37652900-37652919 | Msa0729720:CDS | 65.0% | |
| ! | GCATGGGCGACGGCGGACGC+TGG | + | chr5_1:37652887-37652906 | Msa0729720:CDS | 80.0% |
| ! | TGGGCGACGGCGGACGCTGG+TGG | + | chr5_1:37652890-37652909 | Msa0729720:CDS | 80.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr5_1 | gene | 37651061 | 37654768 | 37651061 | ID=Msa0729720;Name=Msa0729720 |
| chr5_1 | mRNA | 37651061 | 37654768 | 37651061 | ID=Msa0729720-mRNA-1;Parent=Msa0729720;Name=Msa0729720-mRNA-1;_AED=0.02;_eAED=0.02;_QI=0|0.8|0.83|1|1|1|6|267|386 |
| chr5_1 | exon | 37651061 | 37651194 | 37651061 | ID=Msa0729720-mRNA-1:exon:11335;Parent=Msa0729720-mRNA-1 |
| chr5_1 | exon | 37652738 | 37652978 | 37652738 | ID=Msa0729720-mRNA-1:exon:11336;Parent=Msa0729720-mRNA-1 |
| chr5_1 | exon | 37653047 | 37653271 | 37653047 | ID=Msa0729720-mRNA-1:exon:11337;Parent=Msa0729720-mRNA-1 |
| chr5_1 | exon | 37653369 | 37653485 | 37653369 | ID=Msa0729720-mRNA-1:exon:11338;Parent=Msa0729720-mRNA-1 |
| chr5_1 | exon | 37653632 | 37653865 | 37653632 | ID=Msa0729720-mRNA-1:exon:11339;Parent=Msa0729720-mRNA-1 |
| chr5_1 | exon | 37654292 | 37654768 | 37654292 | ID=Msa0729720-mRNA-1:exon:11340;Parent=Msa0729720-mRNA-1 |
| chr5_1 | CDS | 37651061 | 37651194 | 37651061 | ID=Msa0729720-mRNA-1:cds;Parent=Msa0729720-mRNA-1 |
| chr5_1 | CDS | 37652738 | 37652978 | 37652738 | ID=Msa0729720-mRNA-1:cds;Parent=Msa0729720-mRNA-1 |
| chr5_1 | CDS | 37653047 | 37653271 | 37653047 | ID=Msa0729720-mRNA-1:cds;Parent=Msa0729720-mRNA-1 |
| chr5_1 | CDS | 37653369 | 37653485 | 37653369 | ID=Msa0729720-mRNA-1:cds;Parent=Msa0729720-mRNA-1 |
| chr5_1 | CDS | 37653632 | 37653865 | 37653632 | ID=Msa0729720-mRNA-1:cds;Parent=Msa0729720-mRNA-1 |
| chr5_1 | CDS | 37654292 | 37654501 | 37654292 | ID=Msa0729720-mRNA-1:cds;Parent=Msa0729720-mRNA-1 |
| chr5_1 | three_prime_UTR | 37654502 | 37654768 | 37654502 | ID=Msa0729720-mRNA-1:three_prime_utr;Parent=Msa0729720-mRNA-1 |
| Gene Sequence |
| Protein sequence |
