Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1047980 | XP_024626042.2 | 98.193 | 498 | 9 | 0 | 1 | 498 | 1 | 498 | 0.0 | 1009 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1047980 | sp|Q9FLD5|ASD_ARATH | 61.987 | 463 | 163 | 6 | 1 | 456 | 4 | 460 | 0.0 | 577 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1047980 | A0A396GZ58 | 98.193 | 498 | 9 | 0 | 1 | 498 | 1 | 498 | 0.0 | 1009 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0000190 | Msa1047980 | 0.836784 | 7.638193e-57 | -8.615850e-47 |
| Msa0003700 | Msa1047980 | 0.836752 | 7.783534e-57 | -8.615850e-47 |
| Msa0007480 | Msa1047980 | 0.810735 | 9.944839e-51 | -8.615850e-47 |
| Msa0017510 | Msa1047980 | 0.833213 | 6.068929e-56 | -8.615850e-47 |
| Msa0024550 | Msa1047980 | 0.839988 | 1.139891e-57 | -8.615850e-47 |
| Msa0025630 | Msa1047980 | 0.805613 | 1.226764e-49 | -8.615850e-47 |
| Msa0028420 | Msa1047980 | 0.825611 | 4.265493e-54 | -8.615850e-47 |
| Msa0046100 | Msa1047980 | 0.800136 | 1.660671e-48 | -8.615850e-47 |
| Msa0053780 | Msa1047980 | 0.808613 | 2.841753e-50 | -8.615850e-47 |
| Msa0061340 | Msa1047980 | 0.802502 | 5.441068e-49 | -8.615850e-47 |
| Msa0069330 | Msa1047980 | 0.806701 | 7.239834e-50 | -8.615850e-47 |
| Msa0072370 | Msa1047980 | 0.808458 | 3.067322e-50 | -8.615850e-47 |
| Msa0075220 | Msa1047980 | 0.800751 | 1.244338e-48 | -8.615850e-47 |
| Msa0081520 | Msa1047980 | 0.818107 | 2.329320e-52 | -8.615850e-47 |
| Msa0087940 | Msa1047980 | 0.805187 | 1.506474e-49 | -8.615850e-47 |
| Msa0089630 | Msa1047980 | 0.808334 | 3.258798e-50 | -8.615850e-47 |
| Msa0092790 | Msa1047980 | 0.815561 | 8.681027e-52 | -8.615850e-47 |
| Msa0094850 | Msa1047980 | 0.812502 | 4.105262e-51 | -8.615850e-47 |
| Msa0104550 | Msa1047980 | 0.803363 | 3.612484e-49 | -8.615850e-47 |
| Msa0110970 | Msa1047980 | 0.838006 | 3.715119e-57 | -8.615850e-47 |
| Msa0112570 | Msa1047980 | 0.823029 | 1.725656e-53 | -8.615850e-47 |
| Msa0120400 | Msa1047980 | 0.850567 | 1.562564e-60 | -8.615850e-47 |
| Msa0626450 | Msa1047980 | 0.829529 | 4.890958e-55 | -8.615850e-47 |
| Msa0626490 | Msa1047980 | 0.826238 | 3.026682e-54 | -8.615850e-47 |
| Msa0637560 | Msa1047980 | 0.817534 | 3.136593e-52 | -8.615850e-47 |
| Msa0637580 | Msa1047980 | 0.815176 | 1.056923e-51 | -8.615850e-47 |
| Msa0638480 | Msa1047980 | 0.817955 | 2.520575e-52 | -8.615850e-47 |
| Msa0643080 | Msa1047980 | 0.809471 | 1.861241e-50 | -8.615850e-47 |
| Msa0662240 | Msa1047980 | 0.804239 | 2.376127e-49 | -8.615850e-47 |
| Msa0663300 | Msa1047980 | 0.807396 | 5.159959e-50 | -8.615850e-47 |
| Msa0664060 | Msa1047980 | 0.802928 | 4.444781e-49 | -8.615850e-47 |
| Msa0664600 | Msa1047980 | 0.827910 | 1.204772e-54 | -8.615850e-47 |
| Msa0677410 | Msa1047980 | 0.806582 | 7.669902e-50 | -8.615850e-47 |
| Msa0682330 | Msa1047980 | 0.802999 | 4.297181e-49 | -8.615850e-47 |
| Msa0683510 | Msa1047980 | 0.808638 | 2.807563e-50 | -8.615850e-47 |
| Msa0683570 | Msa1047980 | 0.825163 | 5.446133e-54 | -8.615850e-47 |
| Msa0702590 | Msa1047980 | 0.802794 | 4.736379e-49 | -8.615850e-47 |
| Msa0710800 | Msa1047980 | 0.804680 | 1.923341e-49 | -8.615850e-47 |
| Msa0722850 | Msa1047980 | 0.800910 | 1.154641e-48 | -8.615850e-47 |
| Msa0727930 | Msa1047980 | 0.840135 | 1.043334e-57 | -8.615850e-47 |
| Msa0729720 | Msa1047980 | 0.820178 | 7.868827e-53 | -8.615850e-47 |
| Msa0733390 | Msa1047980 | 0.807461 | 4.999067e-50 | -8.615850e-47 |
| Msa0741240 | Msa1047980 | 0.813243 | 2.824785e-51 | -8.615850e-47 |
| Msa0754520 | Msa1047980 | 0.803837 | 2.881480e-49 | -8.615850e-47 |
| Msa0769180 | Msa1047980 | 0.826125 | 3.220831e-54 | -8.615850e-47 |
| Msa0770080 | Msa1047980 | 0.802748 | 4.841410e-49 | -8.615850e-47 |
| Msa0780250 | Msa1047980 | 0.801461 | 8.907540e-49 | -8.615850e-47 |
| Msa0780270 | Msa1047980 | 0.811122 | 8.196651e-51 | -8.615850e-47 |
| Msa0785210 | Msa1047980 | 0.827040 | 1.948925e-54 | -8.615850e-47 |
| Msa0807930 | Msa1047980 | 0.811591 | 6.483949e-51 | -8.615850e-47 |
| Msa0821760 | Msa1047980 | 0.800978 | 1.118349e-48 | -8.615850e-47 |
| Msa0822870 | Msa1047980 | 0.822900 | 1.849850e-53 | -8.615850e-47 |
| Msa0823820 | Msa1047980 | 0.800564 | 1.358155e-48 | -8.615850e-47 |
| Msa0826130 | Msa1047980 | 0.841275 | 5.246335e-58 | -8.615850e-47 |
| Msa0828560 | Msa1047980 | 0.820697 | 5.980373e-53 | -8.615850e-47 |
| Msa0833220 | Msa1047980 | 0.813704 | 2.237286e-51 | -8.615850e-47 |
| Msa0124060 | Msa1047980 | 0.810083 | 1.374581e-50 | -8.615850e-47 |
| Msa0124280 | Msa1047980 | 0.809005 | 2.343077e-50 | -8.615850e-47 |
| Msa0134610 | Msa1047980 | 0.805656 | 1.201295e-49 | -8.615850e-47 |
| Msa0140780 | Msa1047980 | 0.807793 | 4.248396e-50 | -8.615850e-47 |
| Msa0146260 | Msa1047980 | 0.833767 | 4.412964e-56 | -8.615850e-47 |
| Msa0152400 | Msa1047980 | 0.814109 | 1.821244e-51 | -8.615850e-47 |
| Msa0157290 | Msa1047980 | 0.834534 | 2.834605e-56 | -8.615850e-47 |
| Msa0158600 | Msa1047980 | 0.814990 | 1.162690e-51 | -8.615850e-47 |
| Msa0164330 | Msa1047980 | 0.815073 | 1.114253e-51 | -8.615850e-47 |
| Msa0168500 | Msa1047980 | 0.815064 | 1.119173e-51 | -8.615850e-47 |
| Msa0168650 | Msa1047980 | 0.808294 | 3.323815e-50 | -8.615850e-47 |
| Msa0171290 | Msa1047980 | 0.804396 | 2.203863e-49 | -8.615850e-47 |
| Msa0173890 | Msa1047980 | 0.803772 | 2.972324e-49 | -8.615850e-47 |
| Msa0197420 | Msa1047980 | 0.825141 | 5.509064e-54 | -8.615850e-47 |
| Msa0197930 | Msa1047980 | 0.827339 | 1.652524e-54 | -8.615850e-47 |
| Msa0200260 | Msa1047980 | 0.808326 | 3.271495e-50 | -8.615850e-47 |
| Msa0221290 | Msa1047980 | 0.811676 | 6.213790e-51 | -8.615850e-47 |
| Msa0225100 | Msa1047980 | 0.802817 | 4.686159e-49 | -8.615850e-47 |
| Msa0225460 | Msa1047980 | 0.805514 | 1.286813e-49 | -8.615850e-47 |
| Msa0225680 | Msa1047980 | 0.811505 | 6.769365e-51 | -8.615850e-47 |
| Msa0225860 | Msa1047980 | 0.801892 | 7.267591e-49 | -8.615850e-47 |
| Msa0376350 | Msa1047980 | 0.810299 | 1.235255e-50 | -8.615850e-47 |
| Msa0378720 | Msa1047980 | 0.804186 | 2.437466e-49 | -8.615850e-47 |
| Msa0388960 | Msa1047980 | 0.805398 | 1.361187e-49 | -8.615850e-47 |
| Msa0392420 | Msa1047980 | 0.864451 | 1.204251e-64 | -8.615850e-47 |
| Msa0392460 | Msa1047980 | 0.867220 | 1.607188e-65 | -8.615850e-47 |
| Msa0392490 | Msa1047980 | 0.864368 | 1.278360e-64 | -8.615850e-47 |
| Msa0392510 | Msa1047980 | 0.817484 | 3.219132e-52 | -8.615850e-47 |
| Msa0410500 | Msa1047980 | 0.829792 | 4.222383e-55 | -8.615850e-47 |
| Msa0410650 | Msa1047980 | 0.828849 | 7.151973e-55 | -8.615850e-47 |
| Msa0415320 | Msa1047980 | 0.805017 | 1.635487e-49 | -8.615850e-47 |
| Msa0417880 | Msa1047980 | 0.808822 | 2.563747e-50 | -8.615850e-47 |
| Msa0418190 | Msa1047980 | 0.803010 | 4.274231e-49 | -8.615850e-47 |
| Msa0422850 | Msa1047980 | 0.834932 | 2.251687e-56 | -8.615850e-47 |
| Msa0422930 | Msa1047980 | 0.837277 | 5.713992e-57 | -8.615850e-47 |
| Msa0450720 | Msa1047980 | 0.807063 | 6.068611e-50 | -8.615850e-47 |
| Msa0461630 | Msa1047980 | 0.831393 | 1.712214e-55 | -8.615850e-47 |
| Msa0464260 | Msa1047980 | 0.810091 | 1.369165e-50 | -8.615850e-47 |
| Msa0464680 | Msa1047980 | 0.806375 | 8.482256e-50 | -8.615850e-47 |
| Msa0467430 | Msa1047980 | 0.849979 | 2.283382e-60 | -8.615850e-47 |
| Msa0475790 | Msa1047980 | 0.843203 | 1.618832e-58 | -8.615850e-47 |
| Msa0996390 | Msa1047980 | 0.800893 | 1.163766e-48 | -8.615850e-47 |
| Msa1004550 | Msa1047980 | 0.804059 | 2.591097e-49 | -8.615850e-47 |
| Msa1004600 | Msa1047980 | 0.807820 | 4.193867e-50 | -8.615850e-47 |
| Msa1005870 | Msa1047980 | 0.900545 | 6.583328e-78 | -8.615850e-47 |
| Msa1007270 | Msa1047980 | 0.802238 | 6.168015e-49 | -8.615850e-47 |
| Msa1019430 | Msa1047980 | 0.819967 | 8.792231e-53 | -8.615850e-47 |
| Msa1019470 | Msa1047980 | 0.822760 | 1.993656e-53 | -8.615850e-47 |
| Msa1020670 | Msa1047980 | 0.803567 | 3.277289e-49 | -8.615850e-47 |
| Msa1021570 | Msa1047980 | 0.802785 | 4.756782e-49 | -8.615850e-47 |
| Msa1037910 | Msa1047980 | 0.818143 | 2.285609e-52 | -8.615850e-47 |
| Msa1043370 | Msa1047980 | 0.819337 | 1.224356e-52 | -8.615850e-47 |
| Msa1047980 | Msa1048920 | 0.802974 | 4.349166e-49 | -8.615850e-47 |
| Msa1047980 | Msa1050910 | 0.802872 | 4.564313e-49 | -8.615850e-47 |
| Msa1047980 | Msa1051830 | 0.811275 | 7.593943e-51 | -8.615850e-47 |
| Msa1047980 | Msa1080100 | 0.808051 | 3.743878e-50 | -8.615850e-47 |
| Msa1047980 | Msa1080240 | 0.803495 | 3.393112e-49 | -8.615850e-47 |
| Msa1047980 | Msa1085200 | 0.825371 | 4.861054e-54 | -8.615850e-47 |
| Msa1047980 | Msa1092010 | 0.902463 | 9.448320e-79 | -8.615850e-47 |
| Msa1047980 | Msa1123380 | 0.803069 | 4.156424e-49 | -8.615850e-47 |
| Msa1047980 | Msa1125000 | 0.825954 | 3.536843e-54 | -8.615850e-47 |
| Msa1047980 | Msa1129970 | 0.814479 | 1.508601e-51 | -8.615850e-47 |
| Msa1047980 | Msa1135390 | 0.884668 | 1.575628e-71 | -8.615850e-47 |
| Msa1047980 | Msa1140210 | 0.812260 | 4.637547e-51 | -8.615850e-47 |
| Msa1047980 | Msa1148940 | 0.806022 | 1.006431e-49 | -8.615850e-47 |
| Msa1047980 | Msa1151910 | 0.812661 | 3.788367e-51 | -8.615850e-47 |
| Msa1047980 | Msa1157870 | 0.813117 | 3.010752e-51 | -8.615850e-47 |
| Msa1047980 | Msa1167280 | 0.803992 | 2.675549e-49 | -8.615850e-47 |
| Msa1047980 | Msa1169710 | 0.809137 | 2.194919e-50 | -8.615850e-47 |
| Msa1047980 | Msa1172450 | 0.808914 | 2.450317e-50 | -8.615850e-47 |
| Msa1047980 | Msa1179940 | 0.806734 | 7.125253e-50 | -8.615850e-47 |
| Msa1047980 | Msa1179970 | 0.801073 | 1.069478e-48 | -8.615850e-47 |
| Msa1047980 | Msa1189070 | 0.807344 | 5.292322e-50 | -8.615850e-47 |
| Msa1047980 | Msa1192090 | 0.822529 | 2.256177e-53 | -8.615850e-47 |
| Msa1047980 | Msa1196440 | 0.833960 | 3.950228e-56 | -8.615850e-47 |
| Msa1047980 | Msa1199570 | 0.830270 | 3.227225e-55 | -8.615850e-47 |
| Msa1047980 | Msa1199830 | -0.808284 | 3.339699e-50 | -8.615850e-47 |
| Msa1047980 | Msa1213360 | 0.810133 | 1.341334e-50 | -8.615850e-47 |
| Msa1047980 | Msa1213420 | 0.816706 | 4.815176e-52 | -8.615850e-47 |
| Msa1047980 | Msa1218550 | 0.802364 | 5.810003e-49 | -8.615850e-47 |
| Msa1047980 | Msa1221060 | 0.802409 | 5.687510e-49 | -8.615850e-47 |
| Msa1047980 | Msa1224840 | 0.801587 | 8.391574e-49 | -8.615850e-47 |
| Msa1047980 | Msa1229500 | 0.809486 | 1.847472e-50 | -8.615850e-47 |
| Msa1047980 | Msa1242230 | 0.801076 | 1.067857e-48 | -8.615850e-47 |
| Msa1047980 | Msa1264710 | 0.828662 | 7.938316e-55 | -8.615850e-47 |
| Msa1047980 | Msa1269480 | 0.800528 | 1.381555e-48 | -8.615850e-47 |
| Msa1047980 | Msa1271990 | 0.814808 | 1.276098e-51 | -8.615850e-47 |
| Msa1047980 | Msa1276660 | 0.807276 | 5.471835e-50 | -8.615850e-47 |
| Msa1047980 | Msa1292340 | 0.800497 | 1.401756e-48 | -8.615850e-47 |
| Msa1047980 | Msa1303240 | 0.802880 | 4.548379e-49 | -8.615850e-47 |
| Msa1047980 | Msa1303250 | 0.814249 | 1.696575e-51 | -8.615850e-47 |
| Msa1047980 | Msa1313150 | 0.807969 | 3.899166e-50 | -8.615850e-47 |
| Msa1047980 | Msa1322860 | 0.801277 | 9.715662e-49 | -8.615850e-47 |
| Msa1047980 | Msa1328710 | 0.830762 | 2.446409e-55 | -8.615850e-47 |
| Msa1047980 | Msa1346370 | 0.801257 | 9.805535e-49 | -8.615850e-47 |
| Msa1047980 | Msa1361410 | 0.802631 | 5.119450e-49 | -8.615850e-47 |
| Msa1047980 | Msa1366340 | 0.824413 | 8.183017e-54 | -8.615850e-47 |
| Msa1047980 | Msa1369150 | 0.807561 | 4.759048e-50 | -8.615850e-47 |
| Msa1047980 | Msa1374040 | 0.840950 | 6.384648e-58 | -8.615850e-47 |
| Msa1047980 | Msa1374550 | 0.876707 | 1.127497e-68 | -8.615850e-47 |
| Msa1047980 | Msa1382540 | 0.800390 | 1.473768e-48 | -8.615850e-47 |
| Msa1047980 | Msa1430240 | 0.809403 | 1.924731e-50 | -8.615850e-47 |
| Msa1047980 | Msa1436570 | 0.803660 | 3.136015e-49 | -8.615850e-47 |
| Msa1047980 | Msa1437940 | 0.800585 | 1.344982e-48 | -8.615850e-47 |
| Msa1047980 | Msa1439610 | 0.809747 | 1.624239e-50 | -8.615850e-47 |
| Msa1047980 | Msa1440960 | 0.818631 | 1.771851e-52 | -8.615850e-47 |
| Msa1047980 | Msa1445190 | 0.821926 | 3.113728e-53 | -8.615850e-47 |
| Msa1047980 | Msa1452120 | 0.815354 | 9.652365e-52 | -8.615850e-47 |
| Msa1047980 | Msa1459180 | 0.805375 | 1.375771e-49 | -8.615850e-47 |
| Msa1047980 | Msa1465300 | 0.824583 | 7.463252e-54 | -8.615850e-47 |
| Msa0239030 | Msa1047980 | 0.807273 | 5.479187e-50 | -8.615850e-47 |
| Msa0239190 | Msa1047980 | 0.826974 | 2.020170e-54 | -8.615850e-47 |
| Msa0239570 | Msa1047980 | 0.806360 | 8.543860e-50 | -8.615850e-47 |
| Msa0243100 | Msa1047980 | 0.813914 | 2.011162e-51 | -8.615850e-47 |
| Msa0255090 | Msa1047980 | 0.814305 | 1.648449e-51 | -8.615850e-47 |
| Msa0259380 | Msa1047980 | 0.811272 | 7.606991e-51 | -8.615850e-47 |
| Msa0259500 | Msa1047980 | 0.809186 | 2.143178e-50 | -8.615850e-47 |
| Msa0261340 | Msa1047980 | 0.809129 | 2.203575e-50 | -8.615850e-47 |
| Msa0267110 | Msa1047980 | 0.812068 | 5.106180e-51 | -8.615850e-47 |
| Msa0274680 | Msa1047980 | 0.805494 | 1.299558e-49 | -8.615850e-47 |
| Msa0276740 | Msa1047980 | 0.813093 | 3.047256e-51 | -8.615850e-47 |
| Msa0277180 | Msa1047980 | 0.834641 | 2.664877e-56 | -8.615850e-47 |
| Msa0287650 | Msa1047980 | 0.824957 | 6.089580e-54 | -8.615850e-47 |
| Msa0287740 | Msa1047980 | 0.805807 | 1.116665e-49 | -8.615850e-47 |
| Msa0292400 | Msa1047980 | 0.814261 | 1.685822e-51 | -8.615850e-47 |
| Msa0297790 | Msa1047980 | 0.812596 | 3.915393e-51 | -8.615850e-47 |
| Msa0300270 | Msa1047980 | 0.811442 | 6.987695e-51 | -8.615850e-47 |
| Msa0300320 | Msa1047980 | 0.811542 | 6.646175e-51 | -8.615850e-47 |
| Msa0300690 | Msa1047980 | 0.822839 | 1.910576e-53 | -8.615850e-47 |
| Msa0305700 | Msa1047980 | 0.820285 | 7.434497e-53 | -8.615850e-47 |
| Msa0316810 | Msa1047980 | 0.837351 | 5.472578e-57 | -8.615850e-47 |
| Msa0317280 | Msa1047980 | 0.822665 | 2.097957e-53 | -8.615850e-47 |
| Msa0317340 | Msa1047980 | 0.802576 | 5.254499e-49 | -8.615850e-47 |
| Msa0318700 | Msa1047980 | 0.803909 | 2.782929e-49 | -8.615850e-47 |
| Msa0341540 | Msa1047980 | 0.820688 | 6.010816e-53 | -8.615850e-47 |
| Msa0344570 | Msa1047980 | 0.847036 | 1.490946e-59 | -8.615850e-47 |
| Msa0345330 | Msa1047980 | 0.829656 | 4.555446e-55 | -8.615850e-47 |
| Msa0345410 | Msa1047980 | 0.824930 | 6.181229e-54 | -8.615850e-47 |
| Msa0348880 | Msa1047980 | 0.809451 | 1.879907e-50 | -8.615850e-47 |
| Msa0363070 | Msa1047980 | 0.815224 | 1.031256e-51 | -8.615850e-47 |
| Msa0363200 | Msa1047980 | 0.817856 | 2.654091e-52 | -8.615850e-47 |
| Msa0487570 | Msa1047980 | 0.867642 | 1.177782e-65 | -8.615850e-47 |
| Msa0487630 | Msa1047980 | 0.874647 | 5.735115e-68 | -8.615850e-47 |
| Msa0495320 | Msa1047980 | 0.816228 | 6.162713e-52 | -8.615850e-47 |
| Msa0498060 | Msa1047980 | 0.813294 | 2.753301e-51 | -8.615850e-47 |
| Msa0507680 | Msa1047980 | 0.823513 | 1.330061e-53 | -8.615850e-47 |
| Msa0513160 | Msa1047980 | 0.820709 | 5.943097e-53 | -8.615850e-47 |
| Msa0516170 | Msa1047980 | 0.801050 | 1.080981e-48 | -8.615850e-47 |
| Msa0527550 | Msa1047980 | 0.815880 | 7.369106e-52 | -8.615850e-47 |
| Msa0527860 | Msa1047980 | 0.817351 | 3.450308e-52 | -8.615850e-47 |
| Msa0535040 | Msa1047980 | 0.800091 | 1.695764e-48 | -8.615850e-47 |
| Msa0546680 | Msa1047980 | 0.803684 | 3.099684e-49 | -8.615850e-47 |
| Msa0547230 | Msa1047980 | 0.815213 | 1.037059e-51 | -8.615850e-47 |
| Msa0574890 | Msa1047980 | 0.852390 | 4.763290e-61 | -8.615850e-47 |
| Msa0582450 | Msa1047980 | 0.810313 | 1.226823e-50 | -8.615850e-47 |
| Msa0586190 | Msa1047980 | 0.807484 | 4.942068e-50 | -8.615850e-47 |
| Msa0589510 | Msa1047980 | 0.803434 | 3.493471e-49 | -8.615850e-47 |
| Msa0594660 | Msa1047980 | 0.800505 | 1.396332e-48 | -8.615850e-47 |
| Msa0597790 | Msa1047980 | 0.821676 | 3.557245e-53 | -8.615850e-47 |
| Msa0600930 | Msa1047980 | 0.823252 | 1.530559e-53 | -8.615850e-47 |
| Msa0843220 | Msa1047980 | 0.830179 | 3.396814e-55 | -8.615850e-47 |
| Msa0847540 | Msa1047980 | 0.840147 | 1.035613e-57 | -8.615850e-47 |
| Msa0849100 | Msa1047980 | 0.813817 | 2.112288e-51 | -8.615850e-47 |
| Msa0861510 | Msa1047980 | 0.839505 | 1.522077e-57 | -8.615850e-47 |
| Msa0861530 | Msa1047980 | 0.827058 | 1.929147e-54 | -8.615850e-47 |
| Msa0861600 | Msa1047980 | 0.834938 | 2.243606e-56 | -8.615850e-47 |
| Msa0861870 | Msa1047980 | 0.820135 | 8.049386e-53 | -8.615850e-47 |
| Msa0863010 | Msa1047980 | 0.801951 | 7.065239e-49 | -8.615850e-47 |
| Msa0876190 | Msa1047980 | 0.802124 | 6.509228e-49 | -8.615850e-47 |
| Msa0880140 | Msa1047980 | 0.829673 | 4.513138e-55 | -8.615850e-47 |
| Msa0896540 | Msa1047980 | 0.814805 | 1.277941e-51 | -8.615850e-47 |
| Msa0896970 | Msa1047980 | 0.837736 | 4.359596e-57 | -8.615850e-47 |
| Msa0908050 | Msa1047980 | 0.805446 | 1.330046e-49 | -8.615850e-47 |
| Msa0910430 | Msa1047980 | 0.824257 | 8.904670e-54 | -8.615850e-47 |
| Msa0930780 | Msa1047980 | 0.830880 | 2.289076e-55 | -8.615850e-47 |
| Msa0936340 | Msa1047980 | 0.810948 | 8.943563e-51 | -8.615850e-47 |
| Msa0936410 | Msa1047980 | 0.819234 | 1.292850e-52 | -8.615850e-47 |
| Msa0945110 | Msa1047980 | 0.820965 | 5.189072e-53 | -8.615850e-47 |
| Msa0948290 | Msa1047980 | 0.840518 | 8.284029e-58 | -8.615850e-47 |
| Msa0961690 | Msa1047980 | 0.823535 | 1.314818e-53 | -8.615850e-47 |
| Msa0967380 | Msa1047980 | 0.853953 | 1.699187e-61 | -8.615850e-47 |
| Msa0967870 | Msa1047980 | 0.806610 | 7.566632e-50 | -8.615850e-47 |
| Msa0969200 | Msa1047980 | 0.806559 | 7.756702e-50 | -8.615850e-47 |
| Msa0973250 | Msa1047980 | 0.805712 | 1.169189e-49 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1047980 | MtrunA17_Chr7g0215951 | 98.193 | 498 | 9 | 0 | 1 | 498 | 1 | 498 | 0.0 | 1009 |
| Msa1047980 | MtrunA17_Chr6g0452391 | 66.523 | 463 | 146 | 4 | 1 | 460 | 3 | 459 | 0.0 | 630 |
| Msa1047980 | MtrunA17_Chr6g0452371 | 67.171 | 463 | 143 | 4 | 1 | 460 | 5 | 461 | 0.0 | 627 |
| Msa1047980 | MtrunA17_Chr4g0059811 | 58.893 | 506 | 196 | 5 | 1 | 495 | 6 | 510 | 0.0 | 603 |
| Msa1047980 | MtrunA17_Chr1g0155131 | 61.602 | 487 | 161 | 8 | 2 | 485 | 4 | 467 | 0.0 | 593 |
| Msa1047980 | MtrunA17_Chr6g0452451 | 63.248 | 468 | 159 | 4 | 1 | 459 | 5 | 468 | 0.0 | 583 |
| Msa1047980 | MtrunA17_Chr2g0292561 | 59.623 | 478 | 172 | 6 | 2 | 477 | 7 | 465 | 0.0 | 578 |
| Msa1047980 | MtrunA17_Chr6g0452401 | 63.778 | 450 | 147 | 5 | 23 | 460 | 3 | 448 | 0.0 | 566 |
| Msa1047980 | MtrunA17_Chr6g0466811 | 60.659 | 455 | 153 | 6 | 8 | 460 | 21 | 451 | 0.0 | 543 |
| Msa1047980 | MtrunA17_Chr1g0155121 | 52.371 | 464 | 212 | 4 | 1 | 459 | 1 | 460 | 2.93e-174 | 499 |
| Msa1047980 | MtrunA17_Chr6g0452411 | 64.054 | 370 | 119 | 4 | 101 | 460 | 1 | 366 | 4.65e-162 | 465 |
| Msa1047980 | MtrunA17_Chr6g0452361 | 61.149 | 296 | 78 | 3 | 209 | 489 | 1 | 274 | 3.38e-118 | 348 |
| Msa1047980 | MtrunA17_Chr4g0072491 | 42.637 | 455 | 232 | 10 | 1 | 440 | 1 | 441 | 3.70e-118 | 357 |
| Msa1047980 | MtrunA17_Chr5g0404651 | 39.752 | 483 | 244 | 10 | 2 | 472 | 11 | 458 | 6.29e-117 | 353 |
| Msa1047980 | MtrunA17_Chr2g0315921 | 38.723 | 470 | 246 | 8 | 10 | 471 | 14 | 449 | 7.22e-111 | 336 |
| Msa1047980 | MtrunA17_Chr2g0308991 | 38.641 | 471 | 256 | 9 | 1 | 464 | 4 | 448 | 1.10e-110 | 338 |
| Msa1047980 | MtrunA17_Chr2g0315991 | 38.922 | 501 | 238 | 11 | 8 | 487 | 13 | 466 | 1.70e-110 | 336 |
| Msa1047980 | MtrunA17_Chr6g0452481 | 63.043 | 276 | 76 | 5 | 188 | 460 | 2 | 254 | 3.59e-110 | 329 |
| Msa1047980 | MtrunA17_Chr2g0315911 | 40.471 | 467 | 231 | 10 | 10 | 468 | 16 | 443 | 6.02e-109 | 331 |
| Msa1047980 | MtrunA17_Chr2g0315971 | 39.875 | 479 | 237 | 11 | 8 | 477 | 7 | 443 | 1.58e-106 | 333 |
| Msa1047980 | MtrunA17_Chr2g0315971 | 50.190 | 263 | 105 | 3 | 198 | 460 | 467 | 703 | 2.47e-80 | 265 |
| Msa1047980 | MtrunA17_Chr8g0372701 | 37.576 | 495 | 262 | 8 | 9 | 487 | 28 | 491 | 2.61e-105 | 323 |
| Msa1047980 | MtrunA17_Chr2g0315981 | 38.289 | 491 | 247 | 12 | 8 | 487 | 7 | 452 | 1.62e-103 | 317 |
| Msa1047980 | MtrunA17_Chr2g0316041 | 40.143 | 421 | 209 | 8 | 61 | 473 | 1 | 386 | 8.34e-100 | 307 |
| Msa1047980 | MtrunA17_Chr5g0404661 | 36.626 | 486 | 262 | 9 | 5 | 472 | 25 | 482 | 2.87e-94 | 294 |
| Msa1047980 | MtrunA17_Chr2g0316021 | 34.894 | 470 | 225 | 11 | 8 | 469 | 7 | 403 | 1.86e-85 | 270 |
| Msa1047980 | MtrunA17_Chr3g0134831 | 43.322 | 307 | 149 | 4 | 156 | 460 | 4 | 287 | 9.08e-82 | 256 |
| Msa1047980 | MtrunA17_Chr7g0276031 | 34.595 | 370 | 182 | 10 | 93 | 460 | 94 | 405 | 4.86e-64 | 215 |
| Msa1047980 | MtrunA17_Chr8g0346371 | 30.064 | 469 | 258 | 12 | 39 | 485 | 38 | 458 | 4.52e-62 | 210 |
| Msa1047980 | MtrunA17_Chr3g0127381 | 32.258 | 372 | 194 | 8 | 95 | 460 | 95 | 414 | 3.29e-60 | 205 |
| Msa1047980 | MtrunA17_Chr1g0148871 | 64.885 | 131 | 43 | 1 | 332 | 459 | 3 | 133 | 1.18e-50 | 171 |
| Msa1047980 | MtrunA17_Chr6g0452351 | 53.913 | 115 | 52 | 1 | 7 | 120 | 20 | 134 | 1.17e-35 | 129 |
| Msa1047980 | MtrunA17_Chr5g0404671 | 51.852 | 108 | 47 | 2 | 355 | 460 | 1 | 105 | 1.85e-30 | 116 |
| Msa1047980 | MtrunA17_Chr5g0404681 | 43.443 | 122 | 59 | 1 | 142 | 263 | 41 | 152 | 2.04e-27 | 107 |
| Msa1047980 | MtrunA17_Chr1g0211521 | 54.455 | 101 | 43 | 2 | 388 | 485 | 5 | 105 | 1.03e-24 | 99.0 |
| Msa1047980 | MtrunA17_Chr5g0404691 | 35.393 | 178 | 75 | 4 | 288 | 460 | 7 | 149 | 7.27e-21 | 89.4 |
| Msa1047980 | MtrunA17_Chr2g0315961 | 55.769 | 52 | 23 | 0 | 388 | 439 | 1 | 52 | 3.79e-11 | 59.3 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1047980 | AT5G40010.1 | 61.987 | 463 | 163 | 6 | 1 | 456 | 4 | 460 | 0.0 | 577 |
| Msa1047980 | AT3G28580.1 | 60.652 | 460 | 169 | 6 | 1 | 456 | 4 | 455 | 0.0 | 558 |
| Msa1047980 | AT3G28580.2 | 56.957 | 460 | 164 | 7 | 1 | 456 | 4 | 433 | 1.82e-180 | 515 |
| Msa1047980 | AT3G28510.1 | 55.076 | 463 | 197 | 5 | 4 | 463 | 7 | 461 | 2.71e-179 | 514 |
| Msa1047980 | AT3G28610.1 | 52.352 | 489 | 192 | 10 | 8 | 481 | 6 | 468 | 4.99e-171 | 491 |
| Msa1047980 | AT3G28600.1 | 52.282 | 482 | 188 | 8 | 8 | 474 | 7 | 461 | 5.46e-170 | 488 |
| Msa1047980 | AT3G28540.2 | 53.947 | 456 | 202 | 4 | 4 | 458 | 7 | 455 | 1.84e-169 | 488 |
| Msa1047980 | AT3G28540.1 | 53.947 | 456 | 202 | 4 | 4 | 458 | 7 | 455 | 2.76e-169 | 488 |
| Msa1047980 | AT5G40000.1 | 49.084 | 491 | 202 | 12 | 1 | 474 | 4 | 463 | 4.45e-157 | 455 |
| Msa1047980 | AT3G28520.1 | 50.725 | 483 | 210 | 6 | 12 | 477 | 1 | 472 | 2.59e-153 | 446 |
| Msa1047980 | AT3G28600.2 | 48.133 | 482 | 169 | 7 | 8 | 474 | 7 | 422 | 8.11e-148 | 430 |
| Msa1047980 | AT3G28570.1 | 46.502 | 486 | 200 | 9 | 6 | 472 | 7 | 451 | 1.73e-144 | 422 |
| Msa1047980 | AT3G28570.2 | 46.502 | 486 | 200 | 9 | 6 | 472 | 14 | 458 | 1.86e-144 | 422 |
| Msa1047980 | AT5G57480.1 | 38.241 | 489 | 269 | 10 | 1 | 473 | 1 | 472 | 5.45e-115 | 349 |
| Msa1047980 | AT4G25835.1 | 39.873 | 474 | 264 | 11 | 1 | 468 | 1 | 459 | 1.45e-113 | 345 |
| Msa1047980 | AT3G50930.1 | 39.588 | 485 | 252 | 8 | 16 | 484 | 73 | 532 | 2.36e-112 | 344 |
| Msa1047980 | AT3G50940.1 | 38.803 | 451 | 232 | 7 | 20 | 463 | 31 | 444 | 5.78e-110 | 334 |
| Msa1047980 | AT2G18193.1 | 37.500 | 488 | 266 | 8 | 9 | 492 | 19 | 471 | 6.17e-107 | 328 |
| Msa1047980 | AT4G30250.1 | 38.174 | 482 | 269 | 9 | 1 | 468 | 1 | 467 | 1.92e-105 | 325 |
| Msa1047980 | AT4G30250.2 | 38.174 | 482 | 269 | 9 | 1 | 468 | 3 | 469 | 2.08e-105 | 325 |
| Msa1047980 | AT4G05380.1 | 38.155 | 477 | 261 | 7 | 1 | 472 | 12 | 459 | 1.40e-104 | 320 |
| Msa1047980 | AT5G17740.1 | 35.818 | 483 | 267 | 10 | 2 | 472 | 11 | 462 | 3.09e-98 | 306 |
| Msa1047980 | AT5G17760.1 | 40.141 | 426 | 199 | 9 | 64 | 468 | 72 | 462 | 5.81e-97 | 302 |
| Msa1047980 | AT2G18190.1 | 35.443 | 474 | 270 | 7 | 2 | 471 | 13 | 454 | 8.53e-97 | 301 |
| Msa1047980 | AT1G43910.1 | 38.302 | 483 | 255 | 10 | 1 | 468 | 1 | 455 | 8.67e-96 | 298 |
| Msa1047980 | AT5G17730.1 | 34.746 | 472 | 262 | 7 | 6 | 465 | 11 | 448 | 1.71e-93 | 292 |
| Msa1047980 | AT5G17750.1 | 38.859 | 368 | 182 | 7 | 71 | 426 | 55 | 391 | 7.65e-83 | 262 |
| Msa1047980 | AT2G46620.1 | 32.043 | 465 | 262 | 8 | 1 | 460 | 1 | 416 | 1.48e-74 | 243 |
| Msa1047980 | AT5G17760.2 | 39.695 | 262 | 130 | 5 | 64 | 308 | 72 | 322 | 4.70e-54 | 185 |
| Msa1047980 | AT3G29800.1 | 31.389 | 360 | 185 | 9 | 103 | 457 | 75 | 377 | 2.57e-49 | 175 |
| Msa1047980 | AT3G28560.1 | 39.908 | 218 | 111 | 5 | 4 | 213 | 7 | 212 | 2.16e-45 | 160 |
| Msa1047980 | AT4G05340.1 | 50.000 | 92 | 39 | 1 | 328 | 412 | 2 | 93 | 3.16e-20 | 85.9 |
Find 64 sgRNAs with CRISPR-Local
Find 158 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AAACGCGGTTATTTACTTTA+TGG | 0.206027 | 7_2:+9224222 | Msa1047980:CDS |
| AATAGTAAGGTAACTTTATC+TGG | 0.207637 | 7_2:+9224534 | Msa1047980:CDS |
| GGTTCTTGTTAAGAATTATT+TGG | 0.226983 | 7_2:+9224716 | Msa1047980:CDS |
| GACTTCAGCTTTGAGTCTTT+TGG | 0.239776 | 7_2:-9223752 | None:intergenic |
| TTTCATTGTGACAGTGAAAA+AGG | 0.267935 | 7_2:+9224968 | Msa1047980:CDS |
| GTCTTTCACCTGAGAATTCA+TGG | 0.273148 | 7_2:-9223666 | None:intergenic |
| CATGATTTGTTTGATCAAAT+TGG | 0.278428 | 7_2:+9224750 | Msa1047980:CDS |
| GAACATTATGGTGGCTAGTA+TGG | 0.297567 | 7_2:-9223536 | None:intergenic |
| AGCTAAGTATGAGTGAACTA+TGG | 0.321937 | 7_2:+9223500 | None:intergenic |
| AACTTGATCCTGCTCTTATT+AGG | 0.329188 | 7_2:+9224637 | Msa1047980:CDS |
| AGAATTCATGGAAAGTGATT+TGG | 0.342817 | 7_2:-9223654 | None:intergenic |
| ATAGTAGATTTACCTGTTCC+TGG | 0.352380 | 7_2:-9224249 | None:intergenic |
| GTGGAAGATGTGAAGGAAAA+TGG | 0.360536 | 7_2:+9224945 | Msa1047980:CDS |
| TATGGCATACATGAACATTA+TGG | 0.377040 | 7_2:-9223548 | None:intergenic |
| ATGGTTACAAACAATCAAAA+TGG | 0.386452 | 7_2:+9224064 | Msa1047980:CDS |
| TAACCATACCAACCACTACT+TGG | 0.406082 | 7_2:-9224048 | None:intergenic |
| AATTTCAAGGTGTTAAGCTT+TGG | 0.409358 | 7_2:+9223836 | Msa1047980:CDS |
| CTTTATGGTCCTCCAGGAAC+AGG | 0.413204 | 7_2:+9224237 | Msa1047980:CDS |
| TCTTGAATTAACCGCTGTTA+AGG | 0.413878 | 7_2:+9224314 | Msa1047980:CDS |
| ATCTACTATGATTGCCGCTA+TGG | 0.424544 | 7_2:+9224263 | Msa1047980:CDS |
| TGATGAAGAAGACTCATTCA+TGG | 0.426724 | 7_2:+9224458 | Msa1047980:CDS |
| TGGAAAGTGATTTGGATGTA+AGG | 0.435023 | 7_2:-9223646 | None:intergenic |
| ATCACTTTCCATGAATTCTC+AGG | 0.451974 | 7_2:+9223658 | Msa1047980:CDS |
| GCAAGTGTCTCAAAAGTTGC+AGG | 0.465004 | 7_2:-9224108 | None:intergenic |
| TTTGAAGTTTAGAAATGGTA+AGG | 0.467899 | 7_2:+9224170 | Msa1047980:CDS |
| TTCAAGGTGTTAAGCTTTGG+TGG | 0.472961 | 7_2:+9223839 | Msa1047980:CDS |
| TGATCAAATTGGTGATTTGT+TGG | 0.479236 | 7_2:+9224761 | Msa1047980:CDS |
| GAAGTCACAGATGAATTTCA+AGG | 0.493727 | 7_2:+9223823 | Msa1047980:CDS |
| TATTTACTTTATGGTCCTCC+AGG | 0.495610 | 7_2:+9224231 | Msa1047980:CDS |
| AATCCAAGTAGTGGTTGGTA+TGG | 0.518519 | 7_2:+9224045 | Msa1047980:CDS |
| GTATCTCTTATAATTAGAAA+AGG | 0.519504 | 7_2:-9223902 | None:intergenic |
| AAATTCTCAGCAACATCAGC+AGG | 0.526229 | 7_2:-9224801 | None:intergenic |
| CTTCCTGTCCTAATAAGAGC+AGG | 0.535295 | 7_2:-9224645 | None:intergenic |
| GGAAAGTGATTTGGATGTAA+GGG | 0.538609 | 7_2:-9223645 | None:intergenic |
| CAAATAATCCAAGTAGTGGT+TGG | 0.539028 | 7_2:+9224040 | Msa1047980:CDS |
| AAAAGATAGTCAAAATCCAT+TGG | 0.544634 | 7_2:+9223777 | Msa1047980:CDS |
| GATCCTGCTCTTATTAGGAC+AGG | 0.549073 | 7_2:+9224642 | Msa1047980:CDS |
| ATCGGTAAGGCTTGGAAACG+CGG | 0.549524 | 7_2:+9224207 | Msa1047980:CDS |
| TCAAGGTGTTAAGCTTTGGT+GGG | 0.552548 | 7_2:+9223840 | Msa1047980:CDS |
| ACATCTTCATTCACAGACTT+AGG | 0.556783 | 7_2:-9224828 | None:intergenic |
| AAAAGGATATAGTTCTGTGA+TGG | 0.559391 | 7_2:+9224985 | Msa1047980:CDS |
| TCATCAATGCTAAGAACCAA+TGG | 0.561072 | 7_2:-9223793 | None:intergenic |
| ACAAGAAGTAGAAGAAGACA+AGG | 0.563981 | 7_2:+9224905 | Msa1047980:CDS |
| TATACAAATAATCCAAGTAG+TGG | 0.565102 | 7_2:+9224036 | Msa1047980:CDS |
| GCTAAGTATGAGTGAACTAT+GGG | 0.567082 | 7_2:+9223501 | None:intergenic |
| AGACTATCACGAAATGAAGA+TGG | 0.578620 | 7_2:-9223586 | None:intergenic |
| ATTTGATTCAAGCACTTGAG+AGG | 0.587639 | 7_2:+9224868 | Msa1047980:CDS |
| CTGCTCTTATTAGGACAGGA+AGG | 0.593973 | 7_2:+9224646 | Msa1047980:CDS |
| TCTTATTAGGACAGGAAGGA+TGG | 0.597653 | 7_2:+9224650 | Msa1047980:CDS |
| GAAGACAAGGAAGATAGTGT+AGG | 0.600054 | 7_2:+9224918 | Msa1047980:CDS |
| TCAAGCACTTGAGAGGAAGA+AGG | 0.600486 | 7_2:+9224875 | Msa1047980:CDS |
| AAAATTGAAACTTCATCACA+TGG | 0.601556 | 7_2:+9223871 | Msa1047980:CDS |
| CTCAGTATTATCCTTAACAG+CGG | 0.613915 | 7_2:-9224325 | None:intergenic |
| AGTGAACTATGGGCACAACT+AGG | 0.614578 | 7_2:+9223511 | Msa1047980:CDS |
| AGGAACTGTGGAAGATGTGA+AGG | 0.615776 | 7_2:+9224938 | Msa1047980:CDS |
| GGAAGATAGTGTAGGAACTG+TGG | 0.624422 | 7_2:+9224926 | Msa1047980:CDS |
| GGTCTGCGTGTGGAGGAGAG+AGG | 0.632828 | 7_2:+9224583 | Msa1047980:CDS |
| GATGGAATTTGGTCTGCGTG+TGG | 0.633363 | 7_2:+9224573 | Msa1047980:CDS |
| TTGCAATGAGAAATAGACAA+AGG | 0.635194 | 7_2:+9224007 | Msa1047980:CDS |
| GGAATTTGGTCTGCGTGTGG+AGG | 0.648173 | 7_2:+9224576 | Msa1047980:CDS |
| AGCACTTGAGAGGAAGAAGG+TGG | 0.649097 | 7_2:+9224878 | Msa1047980:CDS |
| GGCATACATGAACATTATGG+TGG | 0.652895 | 7_2:-9223545 | None:intergenic |
| GTTCATGAAATTCGCCATAG+CGG | 0.682175 | 7_2:-9224277 | None:intergenic |
| GTAGATTTACCTGTTCCTGG+AGG | 0.701492 | 7_2:-9224246 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AACAAAAAGATTATTATCAT+AGG | + | chr7_2:9224481-9224500 | Msa1047980:CDS | 15.0% |
| !! | GAATAATAGTAAAAATAGTA+AGG | + | chr7_2:9224521-9224540 | Msa1047980:CDS | 15.0% |
| !! | AACAAAAAGATTATTATCAT+AGG | + | chr7_2:9224481-9224500 | Msa1047980:CDS | 15.0% |
| !! | GAATAATAGTAAAAATAGTA+AGG | + | chr7_2:9224521-9224540 | Msa1047980:CDS | 15.0% |
| !! | GTATCTCTTATAATTAGAAA+AGG | - | chr7_2:9223905-9223924 | None:intergenic | 20.0% |
| !!! | GGTTTATTGAATTTTATTGA+TGG | + | chr7_2:9224555-9224574 | Msa1047980:CDS | 20.0% |
| !!! | TGAATTTTATTGATGGAATT+TGG | + | chr7_2:9224562-9224581 | Msa1047980:CDS | 20.0% |
| !! | GTATCTCTTATAATTAGAAA+AGG | - | chr7_2:9223905-9223924 | None:intergenic | 20.0% |
| !!! | GGTTTATTGAATTTTATTGA+TGG | + | chr7_2:9224555-9224574 | Msa1047980:CDS | 20.0% |
| !!! | TGAATTTTATTGATGGAATT+TGG | + | chr7_2:9224562-9224581 | Msa1047980:CDS | 20.0% |
| ! | TGGTAAAAAACGTTCAATTA+TGG | - | chr7_2:9223569-9223588 | None:intergenic | 25.0% |
| ! | AAAAGATAGTCAAAATCCAT+TGG | + | chr7_2:9223777-9223796 | Msa1047980:CDS | 25.0% |
| ! | AAAATTGAAACTTCATCACA+TGG | + | chr7_2:9223871-9223890 | Msa1047980:CDS | 25.0% |
| ! | TATACAAATAATCCAAGTAG+TGG | + | chr7_2:9224036-9224055 | Msa1047980:CDS | 25.0% |
| ! | ATGGTTACAAACAATCAAAA+TGG | + | chr7_2:9224064-9224083 | Msa1047980:CDS | 25.0% |
| !!! | GATCTTTTGAAGTTTAGAAA+TGG | + | chr7_2:9224165-9224184 | Msa1047980:CDS | 25.0% |
| !! | TTTGAAGTTTAGAAATGGTA+AGG | + | chr7_2:9224170-9224189 | Msa1047980:CDS | 25.0% |
| ! | AAGGACTATTATGCAAAAAT+CGG | + | chr7_2:9224189-9224208 | Msa1047980:CDS | 25.0% |
| !! | CATTTTTATTAATCTTCCTC+TGG | - | chr7_2:9224431-9224450 | None:intergenic | 25.0% |
| ! | AATAGTAAGGTAACTTTATC+TGG | + | chr7_2:9224534-9224553 | Msa1047980:CDS | 25.0% |
| !!! | TTGTTGTTTTGAAGCTTTTA+AGG | + | chr7_2:9224695-9224714 | Msa1047980:CDS | 25.0% |
| ! | GGTTCTTGTTAAGAATTATT+TGG | + | chr7_2:9224716-9224735 | Msa1047980:CDS | 25.0% |
| !!! | CATGATTTGTTTGATCAAAT+TGG | + | chr7_2:9224750-9224769 | Msa1047980:CDS | 25.0% |
| ! | TGGTAAAAAACGTTCAATTA+TGG | - | chr7_2:9223569-9223588 | None:intergenic | 25.0% |
| ! | AAAAGATAGTCAAAATCCAT+TGG | + | chr7_2:9223777-9223796 | Msa1047980:CDS | 25.0% |
| ! | AAAATTGAAACTTCATCACA+TGG | + | chr7_2:9223871-9223890 | Msa1047980:CDS | 25.0% |
| ! | TATACAAATAATCCAAGTAG+TGG | + | chr7_2:9224036-9224055 | Msa1047980:CDS | 25.0% |
| ! | ATGGTTACAAACAATCAAAA+TGG | + | chr7_2:9224064-9224083 | Msa1047980:CDS | 25.0% |
| !!! | GATCTTTTGAAGTTTAGAAA+TGG | + | chr7_2:9224165-9224184 | Msa1047980:CDS | 25.0% |
| !! | TTTGAAGTTTAGAAATGGTA+AGG | + | chr7_2:9224170-9224189 | Msa1047980:CDS | 25.0% |
| ! | AAGGACTATTATGCAAAAAT+CGG | + | chr7_2:9224189-9224208 | Msa1047980:CDS | 25.0% |
| !! | CATTTTTATTAATCTTCCTC+TGG | - | chr7_2:9224431-9224450 | None:intergenic | 25.0% |
| ! | AATAGTAAGGTAACTTTATC+TGG | + | chr7_2:9224534-9224553 | Msa1047980:CDS | 25.0% |
| !!! | TTGTTGTTTTGAAGCTTTTA+AGG | + | chr7_2:9224695-9224714 | Msa1047980:CDS | 25.0% |
| ! | GGTTCTTGTTAAGAATTATT+TGG | + | chr7_2:9224716-9224735 | Msa1047980:CDS | 25.0% |
| !!! | CATGATTTGTTTGATCAAAT+TGG | + | chr7_2:9224750-9224769 | Msa1047980:CDS | 25.0% |
| TATGGCATACATGAACATTA+TGG | - | chr7_2:9223551-9223570 | None:intergenic | 30.0% | |
| AGAATTCATGGAAAGTGATT+TGG | - | chr7_2:9223657-9223676 | None:intergenic | 30.0% | |
| ! | AATTTCAAGGTGTTAAGCTT+TGG | + | chr7_2:9223836-9223855 | Msa1047980:CDS | 30.0% |
| !!! | ATCAAGCATGTTTTGAAAGA+AGG | + | chr7_2:9223976-9223995 | Msa1047980:CDS | 30.0% |
| !!! | TCAAGCATGTTTTGAAAGAA+GGG | + | chr7_2:9223977-9223996 | Msa1047980:CDS | 30.0% |
| TTGCAATGAGAAATAGACAA+AGG | + | chr7_2:9224007-9224026 | Msa1047980:CDS | 30.0% | |
| CTATTATGCAAAAATCGGTA+AGG | + | chr7_2:9224194-9224213 | Msa1047980:CDS | 30.0% | |
| AAACGCGGTTATTTACTTTA+TGG | + | chr7_2:9224222-9224241 | Msa1047980:CDS | 30.0% | |
| ! | AATTTTCACGACGAATTTTG+TGG | + | chr7_2:9224611-9224630 | Msa1047980:CDS | 30.0% |
| ! | TGATCAAATTGGTGATTTGT+TGG | + | chr7_2:9224761-9224780 | Msa1047980:CDS | 30.0% |
| TTTCATTGTGACAGTGAAAA+AGG | + | chr7_2:9224968-9224987 | Msa1047980:CDS | 30.0% | |
| TATGGCATACATGAACATTA+TGG | - | chr7_2:9223551-9223570 | None:intergenic | 30.0% | |
| AGAATTCATGGAAAGTGATT+TGG | - | chr7_2:9223657-9223676 | None:intergenic | 30.0% | |
| ! | AATTTCAAGGTGTTAAGCTT+TGG | + | chr7_2:9223836-9223855 | Msa1047980:CDS | 30.0% |
| !!! | ATCAAGCATGTTTTGAAAGA+AGG | + | chr7_2:9223976-9223995 | Msa1047980:CDS | 30.0% |
| !!! | TCAAGCATGTTTTGAAAGAA+GGG | + | chr7_2:9223977-9223996 | Msa1047980:CDS | 30.0% |
| TTGCAATGAGAAATAGACAA+AGG | + | chr7_2:9224007-9224026 | Msa1047980:CDS | 30.0% | |
| CTATTATGCAAAAATCGGTA+AGG | + | chr7_2:9224194-9224213 | Msa1047980:CDS | 30.0% | |
| AAACGCGGTTATTTACTTTA+TGG | + | chr7_2:9224222-9224241 | Msa1047980:CDS | 30.0% | |
| ! | AATTTTCACGACGAATTTTG+TGG | + | chr7_2:9224611-9224630 | Msa1047980:CDS | 30.0% |
| ! | TGATCAAATTGGTGATTTGT+TGG | + | chr7_2:9224761-9224780 | Msa1047980:CDS | 30.0% |
| TTTCATTGTGACAGTGAAAA+AGG | + | chr7_2:9224968-9224987 | Msa1047980:CDS | 30.0% | |
| AGACTATCACGAAATGAAGA+TGG | - | chr7_2:9223589-9223608 | None:intergenic | 35.0% | |
| ! | GGAAAGTGATTTGGATGTAA+GGG | - | chr7_2:9223648-9223667 | None:intergenic | 35.0% |
| ! | TGGAAAGTGATTTGGATGTA+AGG | - | chr7_2:9223649-9223668 | None:intergenic | 35.0% |
| ATCACTTTCCATGAATTCTC+AGG | + | chr7_2:9223658-9223677 | Msa1047980:CDS | 35.0% | |
| ! | AGATGAGTTTTCACTTAGGT+AGG | - | chr7_2:9223725-9223744 | None:intergenic | 35.0% |
| ! | GTTGAGATGAGTTTTCACTT+AGG | - | chr7_2:9223729-9223748 | None:intergenic | 35.0% |
| TCATCAATGCTAAGAACCAA+TGG | - | chr7_2:9223796-9223815 | None:intergenic | 35.0% | |
| GAAGTCACAGATGAATTTCA+AGG | + | chr7_2:9223823-9223842 | Msa1047980:CDS | 35.0% | |
| CAAATAATCCAAGTAGTGGT+TGG | + | chr7_2:9224040-9224059 | Msa1047980:CDS | 35.0% | |
| !!! | AACTTTTGAGACACTTGCAT+TGG | + | chr7_2:9224113-9224132 | Msa1047980:CDS | 35.0% |
| TATTTACTTTATGGTCCTCC+AGG | + | chr7_2:9224231-9224250 | Msa1047980:CDS | 35.0% | |
| ATAGTAGATTTACCTGTTCC+TGG | - | chr7_2:9224252-9224271 | None:intergenic | 35.0% | |
| TCTTGAATTAACCGCTGTTA+AGG | + | chr7_2:9224314-9224333 | Msa1047980:CDS | 35.0% | |
| CTCAGTATTATCCTTAACAG+CGG | - | chr7_2:9224328-9224347 | None:intergenic | 35.0% | |
| TGATGAAGAAGACTCATTCA+TGG | + | chr7_2:9224458-9224477 | Msa1047980:CDS | 35.0% | |
| AACTTGATCCTGCTCTTATT+AGG | + | chr7_2:9224637-9224656 | Msa1047980:CDS | 35.0% | |
| ACATCTTCATTCACAGACTT+AGG | - | chr7_2:9224831-9224850 | None:intergenic | 35.0% | |
| ATTTGATTCAAGCACTTGAG+AGG | + | chr7_2:9224868-9224887 | Msa1047980:CDS | 35.0% | |
| ACAAGAAGTAGAAGAAGACA+AGG | + | chr7_2:9224905-9224924 | Msa1047980:CDS | 35.0% | |
| AGACTATCACGAAATGAAGA+TGG | - | chr7_2:9223589-9223608 | None:intergenic | 35.0% | |
| ! | GGAAAGTGATTTGGATGTAA+GGG | - | chr7_2:9223648-9223667 | None:intergenic | 35.0% |
| ! | TGGAAAGTGATTTGGATGTA+AGG | - | chr7_2:9223649-9223668 | None:intergenic | 35.0% |
| ATCACTTTCCATGAATTCTC+AGG | + | chr7_2:9223658-9223677 | Msa1047980:CDS | 35.0% | |
| ! | AGATGAGTTTTCACTTAGGT+AGG | - | chr7_2:9223725-9223744 | None:intergenic | 35.0% |
| ! | GTTGAGATGAGTTTTCACTT+AGG | - | chr7_2:9223729-9223748 | None:intergenic | 35.0% |
| TCATCAATGCTAAGAACCAA+TGG | - | chr7_2:9223796-9223815 | None:intergenic | 35.0% | |
| GAAGTCACAGATGAATTTCA+AGG | + | chr7_2:9223823-9223842 | Msa1047980:CDS | 35.0% | |
| CAAATAATCCAAGTAGTGGT+TGG | + | chr7_2:9224040-9224059 | Msa1047980:CDS | 35.0% | |
| !!! | AACTTTTGAGACACTTGCAT+TGG | + | chr7_2:9224113-9224132 | Msa1047980:CDS | 35.0% |
| TATTTACTTTATGGTCCTCC+AGG | + | chr7_2:9224231-9224250 | Msa1047980:CDS | 35.0% | |
| ATAGTAGATTTACCTGTTCC+TGG | - | chr7_2:9224252-9224271 | None:intergenic | 35.0% | |
| TCTTGAATTAACCGCTGTTA+AGG | + | chr7_2:9224314-9224333 | Msa1047980:CDS | 35.0% | |
| CTCAGTATTATCCTTAACAG+CGG | - | chr7_2:9224328-9224347 | None:intergenic | 35.0% | |
| TGATGAAGAAGACTCATTCA+TGG | + | chr7_2:9224458-9224477 | Msa1047980:CDS | 35.0% | |
| AACTTGATCCTGCTCTTATT+AGG | + | chr7_2:9224637-9224656 | Msa1047980:CDS | 35.0% | |
| ACATCTTCATTCACAGACTT+AGG | - | chr7_2:9224831-9224850 | None:intergenic | 35.0% | |
| ATTTGATTCAAGCACTTGAG+AGG | + | chr7_2:9224868-9224887 | Msa1047980:CDS | 35.0% | |
| ACAAGAAGTAGAAGAAGACA+AGG | + | chr7_2:9224905-9224924 | Msa1047980:CDS | 35.0% | |
| GAACATTATGGTGGCTAGTA+TGG | - | chr7_2:9223539-9223558 | None:intergenic | 40.0% | |
| GGCATACATGAACATTATGG+TGG | - | chr7_2:9223548-9223567 | None:intergenic | 40.0% | |
| GTCTTTCACCTGAGAATTCA+TGG | - | chr7_2:9223669-9223688 | None:intergenic | 40.0% | |
| !!! | GACTTCAGCTTTGAGTCTTT+TGG | - | chr7_2:9223755-9223774 | None:intergenic | 40.0% |
| ! | TTCAAGGTGTTAAGCTTTGG+TGG | + | chr7_2:9223839-9223858 | Msa1047980:CDS | 40.0% |
| ! | TCAAGGTGTTAAGCTTTGGT+GGG | + | chr7_2:9223840-9223859 | Msa1047980:CDS | 40.0% |
| ! | AATCCAAGTAGTGGTTGGTA+TGG | + | chr7_2:9224045-9224064 | Msa1047980:CDS | 40.0% |
| TAACCATACCAACCACTACT+TGG | - | chr7_2:9224051-9224070 | None:intergenic | 40.0% | |
| ATGCAAAAATCGGTAAGGCT+TGG | + | chr7_2:9224199-9224218 | Msa1047980:CDS | 40.0% | |
| ATCTACTATGATTGCCGCTA+TGG | + | chr7_2:9224263-9224282 | Msa1047980:CDS | 40.0% | |
| GTTCATGAAATTCGCCATAG+CGG | - | chr7_2:9224280-9224299 | None:intergenic | 40.0% | |
| ! | CACTTGATTTTACTAGCCAG+AGG | + | chr7_2:9224412-9224431 | Msa1047980:CDS | 40.0% |
| TCTTATTAGGACAGGAAGGA+TGG | + | chr7_2:9224650-9224669 | Msa1047980:CDS | 40.0% | |
| AAATTCTCAGCAACATCAGC+AGG | - | chr7_2:9224804-9224823 | None:intergenic | 40.0% | |
| GAAGACAAGGAAGATAGTGT+AGG | + | chr7_2:9224918-9224937 | Msa1047980:CDS | 40.0% | |
| GTGGAAGATGTGAAGGAAAA+TGG | + | chr7_2:9224945-9224964 | Msa1047980:CDS | 40.0% | |
| GAACATTATGGTGGCTAGTA+TGG | - | chr7_2:9223539-9223558 | None:intergenic | 40.0% | |
| GGCATACATGAACATTATGG+TGG | - | chr7_2:9223548-9223567 | None:intergenic | 40.0% | |
| GTCTTTCACCTGAGAATTCA+TGG | - | chr7_2:9223669-9223688 | None:intergenic | 40.0% | |
| !!! | GACTTCAGCTTTGAGTCTTT+TGG | - | chr7_2:9223755-9223774 | None:intergenic | 40.0% |
| ! | TTCAAGGTGTTAAGCTTTGG+TGG | + | chr7_2:9223839-9223858 | Msa1047980:CDS | 40.0% |
| ! | TCAAGGTGTTAAGCTTTGGT+GGG | + | chr7_2:9223840-9223859 | Msa1047980:CDS | 40.0% |
| ! | AATCCAAGTAGTGGTTGGTA+TGG | + | chr7_2:9224045-9224064 | Msa1047980:CDS | 40.0% |
| TAACCATACCAACCACTACT+TGG | - | chr7_2:9224051-9224070 | None:intergenic | 40.0% | |
| ATGCAAAAATCGGTAAGGCT+TGG | + | chr7_2:9224199-9224218 | Msa1047980:CDS | 40.0% | |
| ATCTACTATGATTGCCGCTA+TGG | + | chr7_2:9224263-9224282 | Msa1047980:CDS | 40.0% | |
| GTTCATGAAATTCGCCATAG+CGG | - | chr7_2:9224280-9224299 | None:intergenic | 40.0% | |
| ! | CACTTGATTTTACTAGCCAG+AGG | + | chr7_2:9224412-9224431 | Msa1047980:CDS | 40.0% |
| TCTTATTAGGACAGGAAGGA+TGG | + | chr7_2:9224650-9224669 | Msa1047980:CDS | 40.0% | |
| AAATTCTCAGCAACATCAGC+AGG | - | chr7_2:9224804-9224823 | None:intergenic | 40.0% | |
| GAAGACAAGGAAGATAGTGT+AGG | + | chr7_2:9224918-9224937 | Msa1047980:CDS | 40.0% | |
| GTGGAAGATGTGAAGGAAAA+TGG | + | chr7_2:9224945-9224964 | Msa1047980:CDS | 40.0% | |
| AGTGAACTATGGGCACAACT+AGG | + | chr7_2:9223511-9223530 | Msa1047980:CDS | 45.0% | |
| GCAAGTGTCTCAAAAGTTGC+AGG | - | chr7_2:9224111-9224130 | None:intergenic | 45.0% | |
| GTAGATTTACCTGTTCCTGG+AGG | - | chr7_2:9224249-9224268 | None:intergenic | 45.0% | |
| GATCCTGCTCTTATTAGGAC+AGG | + | chr7_2:9224642-9224661 | Msa1047980:CDS | 45.0% | |
| CTTCCTGTCCTAATAAGAGC+AGG | - | chr7_2:9224648-9224667 | None:intergenic | 45.0% | |
| CTGCTCTTATTAGGACAGGA+AGG | + | chr7_2:9224646-9224665 | Msa1047980:CDS | 45.0% | |
| TCAAGCACTTGAGAGGAAGA+AGG | + | chr7_2:9224875-9224894 | Msa1047980:CDS | 45.0% | |
| GGAAGATAGTGTAGGAACTG+TGG | + | chr7_2:9224926-9224945 | Msa1047980:CDS | 45.0% | |
| AGGAACTGTGGAAGATGTGA+AGG | + | chr7_2:9224938-9224957 | Msa1047980:CDS | 45.0% | |
| AGTGAACTATGGGCACAACT+AGG | + | chr7_2:9223511-9223530 | Msa1047980:CDS | 45.0% | |
| GCAAGTGTCTCAAAAGTTGC+AGG | - | chr7_2:9224111-9224130 | None:intergenic | 45.0% | |
| GTAGATTTACCTGTTCCTGG+AGG | - | chr7_2:9224249-9224268 | None:intergenic | 45.0% | |
| GATCCTGCTCTTATTAGGAC+AGG | + | chr7_2:9224642-9224661 | Msa1047980:CDS | 45.0% | |
| CTTCCTGTCCTAATAAGAGC+AGG | - | chr7_2:9224648-9224667 | None:intergenic | 45.0% | |
| CTGCTCTTATTAGGACAGGA+AGG | + | chr7_2:9224646-9224665 | Msa1047980:CDS | 45.0% | |
| TCAAGCACTTGAGAGGAAGA+AGG | + | chr7_2:9224875-9224894 | Msa1047980:CDS | 45.0% | |
| GGAAGATAGTGTAGGAACTG+TGG | + | chr7_2:9224926-9224945 | Msa1047980:CDS | 45.0% | |
| AGGAACTGTGGAAGATGTGA+AGG | + | chr7_2:9224938-9224957 | Msa1047980:CDS | 45.0% | |
| ATCGGTAAGGCTTGGAAACG+CGG | + | chr7_2:9224207-9224226 | Msa1047980:CDS | 50.0% | |
| CTTTATGGTCCTCCAGGAAC+AGG | + | chr7_2:9224237-9224256 | Msa1047980:CDS | 50.0% | |
| GATGGAATTTGGTCTGCGTG+TGG | + | chr7_2:9224573-9224592 | Msa1047980:CDS | 50.0% | |
| AGCACTTGAGAGGAAGAAGG+TGG | + | chr7_2:9224878-9224897 | Msa1047980:CDS | 50.0% | |
| ATCGGTAAGGCTTGGAAACG+CGG | + | chr7_2:9224207-9224226 | Msa1047980:CDS | 50.0% | |
| CTTTATGGTCCTCCAGGAAC+AGG | + | chr7_2:9224237-9224256 | Msa1047980:CDS | 50.0% | |
| GATGGAATTTGGTCTGCGTG+TGG | + | chr7_2:9224573-9224592 | Msa1047980:CDS | 50.0% | |
| AGCACTTGAGAGGAAGAAGG+TGG | + | chr7_2:9224878-9224897 | Msa1047980:CDS | 50.0% | |
| GGAATTTGGTCTGCGTGTGG+AGG | + | chr7_2:9224576-9224595 | Msa1047980:CDS | 55.0% | |
| GGAATTTGGTCTGCGTGTGG+AGG | + | chr7_2:9224576-9224595 | Msa1047980:CDS | 55.0% | |
| GGTCTGCGTGTGGAGGAGAG+AGG | + | chr7_2:9224583-9224602 | Msa1047980:CDS | 65.0% | |
| GGTCTGCGTGTGGAGGAGAG+AGG | + | chr7_2:9224583-9224602 | Msa1047980:CDS | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7_2 | gene | 9223508 | 9225004 | 9223508 | ID=Msa1047980;Name=Msa1047980 |
| chr7_2 | mRNA | 9223508 | 9225004 | 9223508 | ID=Msa1047980-mRNA-1;Parent=Msa1047980;Name=Msa1047980-mRNA-1;_AED=0.01;_eAED=0.01;_QI=0|-1|0|1|-1|1|1|0|498 |
| chr7_2 | exon | 9223508 | 9225004 | 9223508 | ID=Msa1047980-mRNA-1:exon:2434;Parent=Msa1047980-mRNA-1 |
| chr7_2 | CDS | 9223508 | 9225004 | 9223508 | ID=Msa1047980-mRNA-1:cds;Parent=Msa1047980-mRNA-1 |
| Gene Sequence |
| Protein sequence |
