Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1465300 | XP_003614503.2 | 99.194 | 124 | 1 | 0 | 1 | 124 | 1 | 124 | 4.13e-81 | 256 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1465300 | G7JYE2 | 99.194 | 124 | 1 | 0 | 1 | 124 | 1 | 124 | 1.97e-81 | 256 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0003700 | Msa1465300 | 0.810579 | 1.074659e-50 | -8.615850e-47 |
| Msa0011660 | Msa1465300 | -0.800403 | 1.465035e-48 | -8.615850e-47 |
| Msa0015390 | Msa1465300 | 0.828556 | 8.419752e-55 | -8.615850e-47 |
| Msa0017510 | Msa1465300 | 0.828357 | 9.401356e-55 | -8.615850e-47 |
| Msa0022750 | Msa1465300 | -0.804504 | 2.092458e-49 | -8.615850e-47 |
| Msa0026430 | Msa1465300 | 0.811861 | 5.664430e-51 | -8.615850e-47 |
| Msa0035150 | Msa1465300 | 0.827378 | 1.616826e-54 | -8.615850e-47 |
| Msa0036130 | Msa1465300 | 0.814073 | 1.855124e-51 | -8.615850e-47 |
| Msa0046100 | Msa1465300 | 0.816807 | 4.572183e-52 | -8.615850e-47 |
| Msa0051020 | Msa1465300 | 0.813570 | 2.393609e-51 | -8.615850e-47 |
| Msa0052680 | Msa1465300 | 0.809162 | 2.168311e-50 | -8.615850e-47 |
| Msa0052730 | Msa1465300 | 0.810159 | 1.323844e-50 | -8.615850e-47 |
| Msa0054530 | Msa1465300 | 0.801978 | 6.976051e-49 | -8.615850e-47 |
| Msa0058490 | Msa1465300 | 0.802810 | 4.701960e-49 | -8.615850e-47 |
| Msa0058510 | Msa1465300 | 0.805695 | 1.178970e-49 | -8.615850e-47 |
| Msa0061340 | Msa1465300 | 0.822003 | 2.987896e-53 | -8.615850e-47 |
| Msa0069330 | Msa1465300 | 0.830381 | 3.031976e-55 | -8.615850e-47 |
| Msa0091600 | Msa1465300 | 0.816243 | 6.114879e-52 | -8.615850e-47 |
| Msa0094850 | Msa1465300 | 0.802103 | 6.575466e-49 | -8.615850e-47 |
| Msa0097840 | Msa1465300 | 0.812533 | 4.040826e-51 | -8.615850e-47 |
| Msa0101270 | Msa1465300 | 0.807238 | 5.571808e-50 | -8.615850e-47 |
| Msa0104550 | Msa1465300 | 0.826502 | 2.618838e-54 | -8.615850e-47 |
| Msa0110970 | Msa1465300 | 0.802423 | 5.650131e-49 | -8.615850e-47 |
| Msa1346370 | Msa1465300 | 0.805205 | 1.493657e-49 | -8.615850e-47 |
| Msa1353470 | Msa1465300 | 0.851005 | 1.176370e-60 | -8.615850e-47 |
| Msa1357890 | Msa1465300 | 0.818968 | 1.485547e-52 | -8.615850e-47 |
| Msa1367590 | Msa1465300 | 0.805350 | 1.392569e-49 | -8.615850e-47 |
| Msa1372760 | Msa1465300 | 0.802427 | 5.639026e-49 | -8.615850e-47 |
| Msa1374040 | Msa1465300 | 0.800941 | 1.137870e-48 | -8.615850e-47 |
| Msa1398090 | Msa1465300 | 0.822297 | 2.553782e-53 | -8.615850e-47 |
| Msa1411700 | Msa1465300 | 0.803110 | 4.075163e-49 | -8.615850e-47 |
| Msa1418260 | Msa1465300 | 0.813689 | 2.254456e-51 | -8.615850e-47 |
| Msa1422580 | Msa1465300 | 0.827107 | 1.877504e-54 | -8.615850e-47 |
| Msa1423880 | Msa1465300 | 0.818338 | 2.065327e-52 | -8.615850e-47 |
| Msa1435270 | Msa1465300 | 0.810825 | 9.507796e-51 | -8.615850e-47 |
| Msa1439610 | Msa1465300 | 0.828243 | 1.001792e-54 | -8.615850e-47 |
| Msa1447150 | Msa1465300 | 0.806548 | 7.796120e-50 | -8.615850e-47 |
| Msa1448640 | Msa1465300 | 0.807302 | 5.400821e-50 | -8.615850e-47 |
| Msa1458610 | Msa1465300 | 0.812505 | 4.098622e-51 | -8.615850e-47 |
| Msa1459180 | Msa1465300 | 0.808829 | 2.555862e-50 | -8.615850e-47 |
| Msa0602870 | Msa1465300 | 0.805895 | 1.070269e-49 | -8.615850e-47 |
| Msa0638480 | Msa1465300 | 0.805032 | 1.623394e-49 | -8.615850e-47 |
| Msa0641210 | Msa1465300 | 0.804376 | 2.225574e-49 | -8.615850e-47 |
| Msa0642720 | Msa1465300 | 0.810101 | 1.362793e-50 | -8.615850e-47 |
| Msa0643890 | Msa1465300 | 0.821741 | 3.435476e-53 | -8.615850e-47 |
| Msa0657750 | Msa1465300 | 0.817513 | 3.171112e-52 | -8.615850e-47 |
| Msa0667050 | Msa1465300 | 0.806526 | 7.883273e-50 | -8.615850e-47 |
| Msa0669320 | Msa1465300 | 0.802887 | 4.533526e-49 | -8.615850e-47 |
| Msa0683730 | Msa1465300 | 0.851818 | 6.926964e-61 | -8.615850e-47 |
| Msa0685750 | Msa1465300 | 0.800531 | 1.379427e-48 | -8.615850e-47 |
| Msa0713820 | Msa1465300 | 0.812267 | 4.620042e-51 | -8.615850e-47 |
| Msa0720690 | Msa1465300 | 0.812879 | 3.394689e-51 | -8.615850e-47 |
| Msa0721280 | Msa1465300 | 0.820944 | 5.247343e-53 | -8.615850e-47 |
| Msa0729720 | Msa1465300 | 0.862219 | 5.916747e-64 | -8.615850e-47 |
| Msa0740510 | Msa1465300 | 0.812858 | 3.430766e-51 | -8.615850e-47 |
| Msa0740640 | Msa1465300 | 0.814627 | 1.399096e-51 | -8.615850e-47 |
| Msa0756060 | Msa1465300 | 0.829322 | 5.493199e-55 | -8.615850e-47 |
| Msa0759060 | Msa1465300 | 0.811398 | 7.143535e-51 | -8.615850e-47 |
| Msa0770080 | Msa1465300 | 0.846148 | 2.605883e-59 | -8.615850e-47 |
| Msa0807930 | Msa1465300 | 0.824002 | 1.022015e-53 | -8.615850e-47 |
| Msa0820770 | Msa1465300 | 0.807213 | 5.642214e-50 | -8.615850e-47 |
| Msa0826130 | Msa1465300 | 0.819287 | 1.257468e-52 | -8.615850e-47 |
| Msa0828560 | Msa1465300 | 0.805105 | 1.567541e-49 | -8.615850e-47 |
| Msa0828920 | Msa1465300 | 0.818337 | 2.066696e-52 | -8.615850e-47 |
| Msa0832340 | Msa1465300 | 0.826888 | 2.118536e-54 | -8.615850e-47 |
| Msa0141570 | Msa1465300 | 0.823875 | 1.094344e-53 | -8.615850e-47 |
| Msa0144360 | Msa1465300 | 0.805188 | 1.506249e-49 | -8.615850e-47 |
| Msa0145580 | Msa1465300 | 0.825228 | 5.256948e-54 | -8.615850e-47 |
| Msa0148100 | Msa1465300 | 0.802232 | 6.184629e-49 | -8.615850e-47 |
| Msa0152400 | Msa1465300 | 0.827274 | 1.712200e-54 | -8.615850e-47 |
| Msa0157290 | Msa1465300 | 0.828702 | 7.762885e-55 | -8.615850e-47 |
| Msa0195630 | Msa1465300 | 0.826766 | 2.266022e-54 | -8.615850e-47 |
| Msa0201500 | Msa1465300 | 0.800358 | 1.496580e-48 | -8.615850e-47 |
| Msa0205510 | Msa1465300 | 0.806920 | 6.506144e-50 | -8.615850e-47 |
| Msa0212990 | Msa1465300 | 0.800271 | 1.558929e-48 | -8.615850e-47 |
| Msa0218810 | Msa1465300 | 0.825591 | 4.312911e-54 | -8.615850e-47 |
| Msa0237310 | Msa1465300 | 0.808281 | 3.346103e-50 | -8.615850e-47 |
| Msa0237410 | Msa1465300 | 0.822792 | 1.959576e-53 | -8.615850e-47 |
| Msa1236100 | Msa1465300 | 0.813098 | 3.038990e-51 | -8.615850e-47 |
| Msa1250530 | Msa1465300 | 0.827260 | 1.726063e-54 | -8.615850e-47 |
| Msa1255190 | Msa1465300 | 0.822364 | 2.463921e-53 | -8.615850e-47 |
| Msa1270630 | Msa1465300 | 0.802378 | 5.773213e-49 | -8.615850e-47 |
| Msa1276660 | Msa1465300 | 0.812595 | 3.917319e-51 | -8.615850e-47 |
| Msa1284040 | Msa1465300 | 0.803427 | 3.504611e-49 | -8.615850e-47 |
| Msa1286800 | Msa1465300 | 0.820004 | 8.622710e-53 | -8.615850e-47 |
| Msa1287190 | Msa1465300 | 0.804663 | 1.939043e-49 | -8.615850e-47 |
| Msa1287220 | Msa1465300 | 0.806617 | 7.539032e-50 | -8.615850e-47 |
| Msa1295630 | Msa1465300 | 0.814514 | 1.482166e-51 | -8.615850e-47 |
| Msa1306850 | Msa1465300 | 0.804234 | 2.381768e-49 | -8.615850e-47 |
| Msa1313150 | Msa1465300 | 0.813004 | 3.187439e-51 | -8.615850e-47 |
| Msa1323050 | Msa1465300 | 0.810385 | 1.183363e-50 | -8.615850e-47 |
| Msa1328640 | Msa1465300 | 0.809891 | 1.512551e-50 | -8.615850e-47 |
| Msa1328710 | Msa1465300 | 0.814890 | 1.223754e-51 | -8.615850e-47 |
| Msa0376350 | Msa1465300 | 0.806466 | 8.115403e-50 | -8.615850e-47 |
| Msa0388960 | Msa1465300 | 0.820315 | 7.318669e-53 | -8.615850e-47 |
| Msa0392510 | Msa1465300 | 0.805276 | 1.443638e-49 | -8.615850e-47 |
| Msa0393080 | Msa1465300 | 0.805551 | 1.264268e-49 | -8.615850e-47 |
| Msa0395790 | Msa1465300 | 0.800874 | 1.174537e-48 | -8.615850e-47 |
| Msa0410500 | Msa1465300 | 0.820494 | 6.657592e-53 | -8.615850e-47 |
| Msa0410650 | Msa1465300 | 0.808611 | 2.844567e-50 | -8.615850e-47 |
| Msa0417880 | Msa1465300 | 0.800721 | 1.261809e-48 | -8.615850e-47 |
| Msa0422850 | Msa1465300 | 0.815419 | 9.334692e-52 | -8.615850e-47 |
| Msa0422930 | Msa1465300 | 0.818129 | 2.303116e-52 | -8.615850e-47 |
| Msa0433610 | Msa1465300 | 0.808289 | 3.332559e-50 | -8.615850e-47 |
| Msa0439970 | Msa1465300 | 0.807860 | 4.111377e-50 | -8.615850e-47 |
| Msa0440750 | Msa1465300 | 0.806555 | 7.769702e-50 | -8.615850e-47 |
| Msa0452960 | Msa1465300 | 0.810286 | 1.243210e-50 | -8.615850e-47 |
| Msa0464680 | Msa1465300 | 0.802175 | 6.355621e-49 | -8.615850e-47 |
| Msa0467430 | Msa1465300 | 0.811714 | 6.096916e-51 | -8.615850e-47 |
| Msa0475790 | Msa1465300 | 0.819732 | 9.951004e-53 | -8.615850e-47 |
| Msa0982240 | Msa1465300 | 0.805427 | 1.341829e-49 | -8.615850e-47 |
| Msa0997970 | Msa1465300 | 0.811517 | 6.728749e-51 | -8.615850e-47 |
| Msa1004010 | Msa1465300 | 0.801780 | 7.660824e-49 | -8.615850e-47 |
| Msa1004550 | Msa1465300 | 0.800513 | 1.391603e-48 | -8.615850e-47 |
| Msa1004600 | Msa1465300 | 0.800665 | 1.295558e-48 | -8.615850e-47 |
| Msa1005870 | Msa1465300 | 0.831493 | 1.618181e-55 | -8.615850e-47 |
| Msa1009750 | Msa1465300 | 0.801663 | 8.096840e-49 | -8.615850e-47 |
| Msa1019000 | Msa1465300 | 0.803777 | 2.964568e-49 | -8.615850e-47 |
| Msa1019470 | Msa1465300 | 0.803057 | 4.179339e-49 | -8.615850e-47 |
| Msa1033210 | Msa1465300 | 0.814006 | 1.919009e-51 | -8.615850e-47 |
| Msa1041670 | Msa1465300 | 0.803051 | 4.191503e-49 | -8.615850e-47 |
| Msa1045200 | Msa1465300 | 0.817866 | 2.641049e-52 | -8.615850e-47 |
| Msa1047980 | Msa1465300 | 0.824583 | 7.463252e-54 | -8.615850e-47 |
| Msa1050910 | Msa1465300 | 0.823557 | 1.299267e-53 | -8.615850e-47 |
| Msa1050960 | Msa1465300 | 0.800506 | 1.396149e-48 | -8.615850e-47 |
| Msa1059960 | Msa1465300 | 0.808286 | 3.336720e-50 | -8.615850e-47 |
| Msa1081330 | Msa1465300 | 0.800035 | 1.740950e-48 | -8.615850e-47 |
| Msa1085200 | Msa1465300 | 0.810172 | 1.315420e-50 | -8.615850e-47 |
| Msa1092010 | Msa1465300 | 0.828155 | 1.051970e-54 | -8.615850e-47 |
| Msa0244960 | Msa1465300 | 0.820949 | 5.234088e-53 | -8.615850e-47 |
| Msa0258310 | Msa1465300 | 0.808063 | 3.723190e-50 | -8.615850e-47 |
| Msa0259500 | Msa1465300 | 0.850479 | 1.653634e-60 | -8.615850e-47 |
| Msa0274730 | Msa1465300 | 0.807455 | 5.011632e-50 | -8.615850e-47 |
| Msa0277420 | Msa1465300 | 0.800927 | 1.145379e-48 | -8.615850e-47 |
| Msa0281360 | Msa1465300 | 0.806601 | 7.598795e-50 | -8.615850e-47 |
| Msa0287650 | Msa1465300 | 0.808239 | 3.414128e-50 | -8.615850e-47 |
| Msa0297790 | Msa1465300 | 0.804493 | 2.103646e-49 | -8.615850e-47 |
| Msa0300690 | Msa1465300 | 0.829456 | 5.096168e-55 | -8.615850e-47 |
| Msa0305700 | Msa1465300 | 0.836943 | 6.957212e-57 | -8.615850e-47 |
| Msa0311700 | Msa1465300 | 0.800570 | 1.354711e-48 | -8.615850e-47 |
| Msa0315530 | Msa1465300 | 0.805295 | 1.430218e-49 | -8.615850e-47 |
| Msa0330340 | Msa1465300 | 0.805919 | 1.057828e-49 | -8.615850e-47 |
| Msa0333920 | Msa1465300 | 0.818256 | 2.154967e-52 | -8.615850e-47 |
| Msa0334040 | Msa1465300 | 0.824022 | 1.010880e-53 | -8.615850e-47 |
| Msa0335800 | Msa1465300 | 0.818732 | 1.680851e-52 | -8.615850e-47 |
| Msa0341540 | Msa1465300 | 0.856473 | 3.141969e-62 | -8.615850e-47 |
| Msa0357290 | Msa1465300 | 0.806135 | 9.526163e-50 | -8.615850e-47 |
| Msa0357340 | Msa1465300 | 0.806483 | 8.048897e-50 | -8.615850e-47 |
| Msa0359030 | Msa1465300 | 0.812098 | 5.029440e-51 | -8.615850e-47 |
| Msa1135390 | Msa1465300 | 0.810961 | 8.882993e-51 | -8.615850e-47 |
| Msa1137570 | Msa1465300 | 0.848447 | 6.092222e-60 | -8.615850e-47 |
| Msa1147740 | Msa1465300 | 0.803532 | 3.333269e-49 | -8.615850e-47 |
| Msa1151910 | Msa1465300 | 0.825546 | 4.420281e-54 | -8.615850e-47 |
| Msa1154030 | Msa1465300 | 0.801922 | 7.162684e-49 | -8.615850e-47 |
| Msa1162550 | Msa1465300 | -0.808329 | 3.267688e-50 | -8.615850e-47 |
| Msa1173100 | Msa1465300 | 0.811745 | 6.002221e-51 | -8.615850e-47 |
| Msa1179940 | Msa1465300 | 0.817821 | 2.702896e-52 | -8.615850e-47 |
| Msa1179970 | Msa1465300 | 0.820208 | 7.742912e-53 | -8.615850e-47 |
| Msa1179990 | Msa1465300 | 0.803548 | 3.308074e-49 | -8.615850e-47 |
| Msa1188710 | Msa1465300 | 0.842161 | 3.062762e-58 | -8.615850e-47 |
| Msa1189070 | Msa1465300 | 0.800667 | 1.294362e-48 | -8.615850e-47 |
| Msa1193290 | Msa1465300 | 0.813288 | 2.760859e-51 | -8.615850e-47 |
| Msa1196440 | Msa1465300 | 0.804242 | 2.373285e-49 | -8.615850e-47 |
| Msa1199570 | Msa1465300 | 0.813873 | 2.052912e-51 | -8.615850e-47 |
| Msa1208160 | Msa1465300 | 0.802725 | 4.895333e-49 | -8.615850e-47 |
| Msa1221050 | Msa1465300 | 0.800279 | 1.553105e-48 | -8.615850e-47 |
| Msa0488560 | Msa1465300 | 0.825725 | 4.007453e-54 | -8.615850e-47 |
| Msa0495320 | Msa1465300 | 0.815691 | 8.117923e-52 | -8.615850e-47 |
| Msa0495330 | Msa1465300 | 0.810646 | 1.039492e-50 | -8.615850e-47 |
| Msa0507680 | Msa1465300 | 0.804371 | 2.230894e-49 | -8.615850e-47 |
| Msa0523460 | Msa1465300 | 0.812883 | 3.388080e-51 | -8.615850e-47 |
| Msa0547890 | Msa1465300 | 0.815071 | 1.115441e-51 | -8.615850e-47 |
| Msa0574390 | Msa1465300 | 0.801048 | 1.082108e-48 | -8.615850e-47 |
| Msa0574890 | Msa1465300 | 0.825868 | 3.705799e-54 | -8.615850e-47 |
| Msa0589510 | Msa1465300 | 0.822618 | 2.151648e-53 | -8.615850e-47 |
| Msa0601530 | Msa1465300 | 0.808300 | 3.313782e-50 | -8.615850e-47 |
| Msa0601750 | Msa1465300 | 0.805510 | 1.289342e-49 | -8.615850e-47 |
| Msa0849100 | Msa1465300 | 0.856489 | 3.107902e-62 | -8.615850e-47 |
| Msa0861090 | Msa1465300 | 0.812364 | 4.400975e-51 | -8.615850e-47 |
| Msa0861540 | Msa1465300 | 0.811656 | 6.278614e-51 | -8.615850e-47 |
| Msa0861600 | Msa1465300 | 0.800436 | 1.442704e-48 | -8.615850e-47 |
| Msa0880140 | Msa1465300 | 0.830009 | 3.737428e-55 | -8.615850e-47 |
| Msa0896220 | Msa1465300 | 0.811964 | 5.379914e-51 | -8.615850e-47 |
| Msa0908050 | Msa1465300 | 0.813386 | 2.627694e-51 | -8.615850e-47 |
| Msa0930780 | Msa1465300 | 0.811794 | 5.859440e-51 | -8.615850e-47 |
| Msa0934890 | Msa1465300 | 0.817324 | 3.498167e-52 | -8.615850e-47 |
| Msa0944030 | Msa1465300 | 0.801961 | 7.031521e-49 | -8.615850e-47 |
| Msa0969520 | Msa1465300 | 0.821099 | 4.833191e-53 | -8.615850e-47 |
| Msa0974060 | Msa1465300 | 0.831196 | 1.913924e-55 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1465300 | MtrunA17_Chr5g0422761 | 99.194 | 124 | 1 | 0 | 1 | 124 | 1 | 124 | 3.80e-85 | 256 |
| Msa1465300 | MtrunA17_Chr1g0210161 | 69.792 | 96 | 29 | 0 | 29 | 124 | 35 | 130 | 7.49e-28 | 106 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1465300 | AT1G25500.2 | 55.172 | 116 | 49 | 1 | 9 | 124 | 18 | 130 | 1.24e-37 | 132 |
| Msa1465300 | AT1G25500.3 | 67.273 | 55 | 18 | 0 | 70 | 124 | 18 | 72 | 5.50e-19 | 81.6 |
Find 45 sgRNAs with CRISPR-Local
Find 174 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GTCATCAACTAACTTTAAAA+TGG | 0.145187 | tig0045123:-1911 | Msa1465300:intergenic |
| CTATTATTCGTTACAGCTTT+TGG | 0.231291 | tig0045123:+2121 | Msa1465300:five_prime_UTR |
| TTGTGATTCTTGGCGTTAAC+AGG | 0.271164 | tig0045123:+3291 | Msa1465300:CDS |
| AAGCAGAGAGAGAGATGATT+TGG | 0.290037 | tig0045123:-1998 | Msa1465300:intergenic |
| GGCGTTGGCACGATGTATTC+TGG | 0.294547 | tig0045123:+3225 | Msa1465300:CDS |
| CTGGTTTGACAGAGGATTAC+TGG | 0.297174 | tig0045123:+3375 | Msa1465300:CDS |
| TCATCAACTAACTTTAAAAT+GGG | 0.343416 | tig0045123:-1910 | Msa1465300:intergenic |
| TATGCTGTCGCTGGCGGCGT+TGG | 0.349719 | tig0045123:+3404 | Msa1465300:CDS |
| ATGCTGTCGCTGGCGGCGTT+GGG | 0.354756 | tig0045123:+3405 | Msa1465300:CDS |
| ACGAAAATAGATTAGATAGA+AGG | 0.379012 | tig0045123:-2059 | Msa1465300:intergenic |
| GGCGGCGTTGGGACTGCTCT+TGG | 0.380288 | tig0045123:+3416 | Msa1465300:CDS |
| AAAAGCATTGCACAGCTTGT+TGG | 0.384385 | tig0045123:-2207 | Msa1465300:intergenic |
| GAGATGAAGTAGGAATAAAA+AGG | 0.387744 | tig0045123:-2181 | Msa1465300:intergenic |
| ATGGAGTTGGTTGTTGCTGT+TGG | 0.393555 | tig0045123:+3439 | Msa1465300:CDS |
| TTGAATGTAAGAAAAGAAAA+AGG | 0.402017 | tig0045123:-2144 | Msa1465300:intergenic |
| CAAAACCCACGCCAATCAAC+TGG | 0.407766 | tig0045123:-3284 | Msa1465300:intergenic |
| CTATTTGTGATCCAGTTGAT+TGG | 0.417906 | tig0045123:+3254 | Msa1465300:CDS |
| TAAGTACACGTACCGGTTCA+TGG | 0.432396 | tig0045123:+3343 | Msa1465300:CDS |
| GGACTGCTCTTGGATGGAGT+TGG | 0.442052 | tig0045123:+3426 | Msa1465300:CDS |
| TACCTGATTGTTGGTGGCAG+TGG | 0.442191 | tig0045123:-2264 | Msa1465300:intergenic |
| TGGAGTTGGTTGTTGCTGTT+GGG | 0.445429 | tig0045123:+3440 | Msa1465300:CDS |
| GCGTTGGGACTGCTCTTGGA+TGG | 0.476999 | tig0045123:+3420 | Msa1465300:CDS |
| TTCCACTGCCACCAACAATC+AGG | 0.481194 | tig0045123:+2262 | Msa1465300:CDS |
| TCTTATGACAATTACCATCA+TGG | 0.483049 | tig0045123:+2235 | Msa1465300:exon |
| GCATGGCAACGTTACAATCA+TGG | 0.485605 | tig0045123:+1952 | Msa1465300:five_prime_UTR |
| CAGCCTCATTCTCCATGAAC+CGG | 0.504266 | tig0045123:-3374 | Msa1465300:intergenic |
| TGGCCACTCTATGCTGTCGC+TGG | 0.505383 | tig0045123:+3395 | Msa1465300:CDS |
| CGGTTCATGGAGAATGAGGC+TGG | 0.519033 | tig0045123:+3356 | Msa1465300:CDS |
| CATCAGTGAAGTGGTGAACA+TGG | 0.529486 | tig0045123:+3193 | Msa1465300:CDS |
| TTGAAGTACCTGATTGTTGG+TGG | 0.559667 | tig0045123:-2270 | Msa1465300:intergenic |
| GTGATCCAGTTGATTGGCGT+GGG | 0.570702 | tig0045123:+3260 | Msa1465300:CDS |
| GATGACAACACAACACAAGA+TGG | 0.586305 | tig0045123:+1928 | Msa1465300:five_prime_UTR |
| TGTGATCCAGTTGATTGGCG+TGG | 0.597398 | tig0045123:+3259 | Msa1465300:CDS |
| GTACCGGTTCATGGAGAATG+AGG | 0.606474 | tig0045123:+3352 | Msa1465300:CDS |
| CCACTCTATGCTGTCGCTGG+CGG | 0.608339 | tig0045123:+3398 | Msa1465300:CDS |
| CATCAACTAACTTTAAAATG+GGG | 0.611406 | tig0045123:-1909 | Msa1465300:intergenic |
| ACATTGATAAGTACACGTAC+CGG | 0.624419 | tig0045123:+3336 | Msa1465300:CDS |
| CAACAACAACATCAGTGAAG+TGG | 0.626519 | tig0045123:+3184 | Msa1465300:CDS |
| ACACAACACAAGATGGCGCA+TGG | 0.628515 | tig0045123:+1935 | Msa1465300:five_prime_UTR |
| GAATGAGGCTGGTTTGACAG+AGG | 0.635745 | tig0045123:+3367 | Msa1465300:CDS |
| CCGCCAGCGACAGCATAGAG+TGG | 0.636241 | tig0045123:-3417 | Msa1465300:intergenic |
| TTGTTGGAGAGAGATGAAGT+AGG | 0.639616 | tig0045123:-2191 | Msa1465300:intergenic |
| AACGTTACAATCATGGCGCG+TGG | 0.643009 | tig0045123:+1959 | Msa1465300:five_prime_UTR |
| GGCAGTGGAAGAATCCATGA+TGG | 0.691125 | tig0045123:-2249 | Msa1465290:intergenic |
| TGTTAACGCCAAGAATCACA+AGG | 0.715028 | tig0045123:-3308 | Msa1465290:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAAAGATAAAAAAAAATTGT+GGG | - | tig0045123:2306-2325 | Msa1465300:intergenic | 10.0% |
| !! | AAAAGATAAAAAAAAATTGT+GGG | - | tig0045123:2306-2325 | Msa1465300:intergenic | 10.0% |
| !! | GAAAAGATAAAAAAAAATTG+TGG | - | tig0045123:2307-2326 | Msa1465300:intergenic | 15.0% |
| !!! | TTCATTTTTTTTCTTTCTAT+TGG | + | tig0045123:2380-2399 | Msa1465300:intron | 15.0% |
| !!! | ATAAAAATCATTGATTATGA+AGG | + | tig0045123:2637-2656 | Msa1465300:intron | 15.0% |
| !!! | GGATTCTATTTTTTTTTTTT+TGG | - | tig0045123:2795-2814 | Msa1465300:intergenic | 15.0% |
| !!! | AAAAAAAATAGAATCCATTT+TGG | + | tig0045123:2799-2818 | Msa1465300:intron | 15.0% |
| !!! | AACATTTCTAAAATCAATTT+TGG | + | tig0045123:2855-2874 | Msa1465300:intron | 15.0% |
| !! | TAATTGAATTATTGTATGTT+TGG | - | tig0045123:2898-2917 | Msa1465300:intergenic | 15.0% |
| !! | TAAAAAAATGTTAAGCTATA+AGG | - | tig0045123:2921-2940 | Msa1465300:intergenic | 15.0% |
| !! | AATATGAAATGACATAAAAA+CGG | - | tig0045123:2999-3018 | Msa1465300:intergenic | 15.0% |
| !! | GAAAAGATAAAAAAAAATTG+TGG | - | tig0045123:2307-2326 | Msa1465300:intergenic | 15.0% |
| !!! | TTCATTTTTTTTCTTTCTAT+TGG | + | tig0045123:2380-2399 | Msa1465300:intron | 15.0% |
| !!! | ATAAAAATCATTGATTATGA+AGG | + | tig0045123:2637-2656 | Msa1465300:intron | 15.0% |
| !!! | GGATTCTATTTTTTTTTTTT+TGG | - | tig0045123:2795-2814 | Msa1465300:intergenic | 15.0% |
| !!! | AAAAAAAATAGAATCCATTT+TGG | + | tig0045123:2799-2818 | Msa1465300:intron | 15.0% |
| !!! | AACATTTCTAAAATCAATTT+TGG | + | tig0045123:2855-2874 | Msa1465300:intron | 15.0% |
| !! | TAATTGAATTATTGTATGTT+TGG | - | tig0045123:2898-2917 | Msa1465300:intergenic | 15.0% |
| !! | TAAAAAAATGTTAAGCTATA+AGG | - | tig0045123:2921-2940 | Msa1465300:intergenic | 15.0% |
| !! | AATATGAAATGACATAAAAA+CGG | - | tig0045123:2999-3018 | Msa1465300:intergenic | 15.0% |
| !!! | TCATCAACTAACTTTAAAAT+GGG | - | tig0045123:1913-1932 | None:intergenic | 20.0% |
| !! | TTGAATGTAAGAAAAGAAAA+AGG | - | tig0045123:2147-2166 | Msa1465300:intergenic | 20.0% |
| !!! | TGATTTTTATTCAGTTTTTG+TGG | - | tig0045123:2607-2626 | Msa1465300:intergenic | 20.0% |
| !! | TTCCAAGTAAAATAGTAAAA+TGG | - | tig0045123:2947-2966 | Msa1465300:intergenic | 20.0% |
| !!! | TCATCAACTAACTTTAAAAT+GGG | - | tig0045123:1913-1932 | Msa1465300:intergenic | 20.0% |
| !! | TTGAATGTAAGAAAAGAAAA+AGG | - | tig0045123:2147-2166 | Msa1465300:intergenic | 20.0% |
| !!! | TGATTTTTATTCAGTTTTTG+TGG | - | tig0045123:2607-2626 | Msa1465300:intergenic | 20.0% |
| !! | TTCCAAGTAAAATAGTAAAA+TGG | - | tig0045123:2947-2966 | Msa1465300:intergenic | 20.0% |
| !!! | CATCAACTAACTTTAAAATG+GGG | - | tig0045123:1912-1931 | None:intergenic | 25.0% |
| !! | GTCATCAACTAACTTTAAAA+TGG | - | tig0045123:1914-1933 | None:intergenic | 25.0% |
| ! | ACGAAAATAGATTAGATAGA+AGG | - | tig0045123:2062-2081 | Msa1465300:intergenic | 25.0% |
| !! | TTGAACTTGTGTTCTTTTAT+AGG | + | tig0045123:2410-2429 | Msa1465300:intron | 25.0% |
| ! | TAAGCTAATAAGTGTATGAT+TGG | + | tig0045123:2573-2592 | Msa1465300:intron | 25.0% |
| !!! | TAATTGATTGTTTTGAAGCT+GGG | - | tig0045123:2768-2787 | Msa1465300:intergenic | 25.0% |
| !!! | ATAATTGATTGTTTTGAAGC+TGG | - | tig0045123:2769-2788 | Msa1465300:intergenic | 25.0% |
| !! | AAAAATAGAATCCATTTTGG+AGG | + | tig0045123:2802-2821 | Msa1465300:intron | 25.0% |
| !! | CTCCATTTTACTATTTTACT+TGG | + | tig0045123:2942-2961 | Msa1465300:intron | 25.0% |
| !!! | CATCAACTAACTTTAAAATG+GGG | - | tig0045123:1912-1931 | Msa1465300:intergenic | 25.0% |
| !! | GTCATCAACTAACTTTAAAA+TGG | - | tig0045123:1914-1933 | Msa1465300:intergenic | 25.0% |
| ! | ACGAAAATAGATTAGATAGA+AGG | - | tig0045123:2062-2081 | Msa1465300:intergenic | 25.0% |
| !! | TTGAACTTGTGTTCTTTTAT+AGG | + | tig0045123:2410-2429 | Msa1465300:intron | 25.0% |
| ! | TAAGCTAATAAGTGTATGAT+TGG | + | tig0045123:2573-2592 | Msa1465300:intron | 25.0% |
| !!! | TAATTGATTGTTTTGAAGCT+GGG | - | tig0045123:2768-2787 | Msa1465300:intergenic | 25.0% |
| !!! | ATAATTGATTGTTTTGAAGC+TGG | - | tig0045123:2769-2788 | Msa1465300:intergenic | 25.0% |
| !! | AAAAATAGAATCCATTTTGG+AGG | + | tig0045123:2802-2821 | Msa1465300:intron | 25.0% |
| !! | CTCCATTTTACTATTTTACT+TGG | + | tig0045123:2942-2961 | Msa1465300:intron | 25.0% |
| ! | CTATTATTCGTTACAGCTTT+TGG | + | tig0045123:2121-2140 | Msa1465300:five_prime_UTR | 30.0% |
| GAGATGAAGTAGGAATAAAA+AGG | - | tig0045123:2184-2203 | Msa1465300:intergenic | 30.0% | |
| TCTTATGACAATTACCATCA+TGG | + | tig0045123:2235-2254 | Msa1465300:exon | 30.0% | |
| !! | TTTGATTTTTACCCTCTCTA+AGG | + | tig0045123:2338-2357 | Msa1465300:intron | 30.0% |
| TATCAAACGAGCTCAAAATA+TGG | - | tig0045123:2451-2470 | Msa1465300:intergenic | 30.0% | |
| ATGCTAAGGGGAAAAAATAA+TGG | - | tig0045123:3109-3128 | Msa1465300:intergenic | 30.0% | |
| ATGATATACTCAGATGCTAA+GGG | - | tig0045123:3122-3141 | Msa1465300:intergenic | 30.0% | |
| TATGATATACTCAGATGCTA+AGG | - | tig0045123:3123-3142 | Msa1465300:intergenic | 30.0% | |
| TAGCATCTGAGTATATCATA+TGG | + | tig0045123:3123-3142 | Msa1465300:intron | 30.0% | |
| ! | ATGGATTTTTGACAATATGC+AGG | + | tig0045123:3142-3161 | Msa1465300:intron | 30.0% |
| ! | CTATTATTCGTTACAGCTTT+TGG | + | tig0045123:2121-2140 | Msa1465300:five_prime_UTR | 30.0% |
| GAGATGAAGTAGGAATAAAA+AGG | - | tig0045123:2184-2203 | Msa1465300:intergenic | 30.0% | |
| TCTTATGACAATTACCATCA+TGG | + | tig0045123:2235-2254 | Msa1465300:exon | 30.0% | |
| !! | TTTGATTTTTACCCTCTCTA+AGG | + | tig0045123:2338-2357 | Msa1465300:intron | 30.0% |
| TATCAAACGAGCTCAAAATA+TGG | - | tig0045123:2451-2470 | Msa1465300:intergenic | 30.0% | |
| ATGCTAAGGGGAAAAAATAA+TGG | - | tig0045123:3109-3128 | Msa1465300:intergenic | 30.0% | |
| ATGATATACTCAGATGCTAA+GGG | - | tig0045123:3122-3141 | Msa1465300:intergenic | 30.0% | |
| TATGATATACTCAGATGCTA+AGG | - | tig0045123:3123-3142 | Msa1465300:intergenic | 30.0% | |
| TAGCATCTGAGTATATCATA+TGG | + | tig0045123:3123-3142 | Msa1465300:intron | 30.0% | |
| ! | ATGGATTTTTGACAATATGC+AGG | + | tig0045123:3142-3161 | Msa1465300:intron | 30.0% |
| !!! | GTTTTGAAGTACCTGATTGT+TGG | - | tig0045123:2276-2295 | Msa1465300:intergenic | 35.0% |
| AAAACCTCATACCTTAGAGA+GGG | - | tig0045123:2352-2371 | Msa1465300:intergenic | 35.0% | |
| ! | TGTTTGGTTTCACTTCTAGA+GGG | - | tig0045123:2882-2901 | Msa1465300:intergenic | 35.0% |
| ! | ATGTTTGGTTTCACTTCTAG+AGG | - | tig0045123:2883-2902 | Msa1465300:intergenic | 35.0% |
| CTGATAAGCTAGGGTTATAA+TGG | - | tig0045123:3082-3101 | Msa1465300:intergenic | 35.0% | |
| AATGGATAGCTGATAAGCTA+GGG | - | tig0045123:3091-3110 | Msa1465300:intergenic | 35.0% | |
| ! | TAATGGATAGCTGATAAGCT+AGG | - | tig0045123:3092-3111 | Msa1465300:intergenic | 35.0% |
| TGATATACTCAGATGCTAAG+GGG | - | tig0045123:3121-3140 | Msa1465300:intergenic | 35.0% | |
| ! | CAGGAGAAGTATAGAAAAAG+TGG | + | tig0045123:3161-3180 | Msa1465300:intron | 35.0% |
| CTATTTGTGATCCAGTTGAT+TGG | + | tig0045123:3254-3273 | Msa1465300:CDS | 35.0% | |
| ACAGGTTCAAGAAAAAGAAC+AGG | + | tig0045123:3309-3328 | Msa1465300:CDS | 35.0% | |
| ACATTGATAAGTACACGTAC+CGG | + | tig0045123:3336-3355 | Msa1465300:CDS | 35.0% | |
| !!! | GTTTTGAAGTACCTGATTGT+TGG | - | tig0045123:2276-2295 | Msa1465300:intergenic | 35.0% |
| AAAACCTCATACCTTAGAGA+GGG | - | tig0045123:2352-2371 | Msa1465300:intergenic | 35.0% | |
| ! | TGTTTGGTTTCACTTCTAGA+GGG | - | tig0045123:2882-2901 | Msa1465300:intergenic | 35.0% |
| ! | ATGTTTGGTTTCACTTCTAG+AGG | - | tig0045123:2883-2902 | Msa1465300:intergenic | 35.0% |
| CTGATAAGCTAGGGTTATAA+TGG | - | tig0045123:3082-3101 | Msa1465300:intergenic | 35.0% | |
| AATGGATAGCTGATAAGCTA+GGG | - | tig0045123:3091-3110 | Msa1465300:intergenic | 35.0% | |
| ! | TAATGGATAGCTGATAAGCT+AGG | - | tig0045123:3092-3111 | Msa1465300:intergenic | 35.0% |
| TGATATACTCAGATGCTAAG+GGG | - | tig0045123:3121-3140 | Msa1465300:intergenic | 35.0% | |
| ! | CAGGAGAAGTATAGAAAAAG+TGG | + | tig0045123:3161-3180 | Msa1465300:intron | 35.0% |
| CTATTTGTGATCCAGTTGAT+TGG | + | tig0045123:3254-3273 | Msa1465300:CDS | 35.0% | |
| ACAGGTTCAAGAAAAAGAAC+AGG | + | tig0045123:3309-3328 | Msa1465300:CDS | 35.0% | |
| ACATTGATAAGTACACGTAC+CGG | + | tig0045123:3336-3355 | Msa1465300:CDS | 35.0% | |
| GATGACAACACAACACAAGA+TGG | + | tig0045123:1928-1947 | Msa1465300:five_prime_UTR | 40.0% | |
| AAGCAGAGAGAGAGATGATT+TGG | - | tig0045123:2001-2020 | Msa1465300:intergenic | 40.0% | |
| TTGTTGGAGAGAGATGAAGT+AGG | - | tig0045123:2194-2213 | Msa1465300:intergenic | 40.0% | |
| !! | AAAAGCATTGCACAGCTTGT+TGG | - | tig0045123:2210-2229 | Msa1465300:intergenic | 40.0% |
| ! | TTGAAGTACCTGATTGTTGG+TGG | - | tig0045123:2273-2292 | Msa1465300:intergenic | 40.0% |
| !! | TTTACCCTCTCTAAGGTATG+AGG | + | tig0045123:2345-2364 | Msa1465300:intron | 40.0% |
| GAAAACCTCATACCTTAGAG+AGG | - | tig0045123:2353-2372 | Msa1465300:intergenic | 40.0% | |
| !! | TGCTGATTTAGCCTCCAAAA+TGG | - | tig0045123:2816-2835 | Msa1465300:intergenic | 40.0% |
| CAACAACAACATCAGTGAAG+TGG | + | tig0045123:3184-3203 | Msa1465300:CDS | 40.0% | |
| TGGTGAACATGGAGCAAAAA+AGG | + | tig0045123:3204-3223 | Msa1465300:CDS | 40.0% | |
| !! | GGTTTTGTCCTTGTGATTCT+TGG | + | tig0045123:3281-3300 | Msa1465300:CDS | 40.0% |
| TGTTAACGCCAAGAATCACA+AGG | - | tig0045123:3292-3311 | Msa1465300:intergenic | 40.0% | |
| TTGTGATTCTTGGCGTTAAC+AGG | + | tig0045123:3291-3310 | Msa1465300:CDS | 40.0% | |
| GATGACAACACAACACAAGA+TGG | + | tig0045123:1928-1947 | Msa1465300:five_prime_UTR | 40.0% | |
| AAGCAGAGAGAGAGATGATT+TGG | - | tig0045123:2001-2020 | Msa1465300:intergenic | 40.0% | |
| TTGTTGGAGAGAGATGAAGT+AGG | - | tig0045123:2194-2213 | Msa1465300:intergenic | 40.0% | |
| !! | AAAAGCATTGCACAGCTTGT+TGG | - | tig0045123:2210-2229 | Msa1465300:intergenic | 40.0% |
| ! | TTGAAGTACCTGATTGTTGG+TGG | - | tig0045123:2273-2292 | Msa1465300:intergenic | 40.0% |
| !! | TTTACCCTCTCTAAGGTATG+AGG | + | tig0045123:2345-2364 | Msa1465300:intron | 40.0% |
| GAAAACCTCATACCTTAGAG+AGG | - | tig0045123:2353-2372 | Msa1465300:intergenic | 40.0% | |
| !! | TGCTGATTTAGCCTCCAAAA+TGG | - | tig0045123:2816-2835 | Msa1465300:intergenic | 40.0% |
| CAACAACAACATCAGTGAAG+TGG | + | tig0045123:3184-3203 | Msa1465300:CDS | 40.0% | |
| TGGTGAACATGGAGCAAAAA+AGG | + | tig0045123:3204-3223 | Msa1465300:CDS | 40.0% | |
| !! | GGTTTTGTCCTTGTGATTCT+TGG | + | tig0045123:3281-3300 | Msa1465300:CDS | 40.0% |
| TGTTAACGCCAAGAATCACA+AGG | - | tig0045123:3292-3311 | Msa1465300:intergenic | 40.0% | |
| TTGTGATTCTTGGCGTTAAC+AGG | + | tig0045123:3291-3310 | Msa1465300:CDS | 40.0% | |
| GCATGGCAACGTTACAATCA+TGG | + | tig0045123:1952-1971 | Msa1465300:five_prime_UTR | 45.0% | |
| CATCAGTGAAGTGGTGAACA+TGG | + | tig0045123:3193-3212 | Msa1465300:CDS | 45.0% | |
| ! | ACATGGAGCAAAAAAGGCGT+TGG | + | tig0045123:3210-3229 | Msa1465300:CDS | 45.0% |
| !! | TAAGTACACGTACCGGTTCA+TGG | + | tig0045123:3343-3362 | Msa1465300:CDS | 45.0% |
| ! | CTGGTTTGACAGAGGATTAC+TGG | + | tig0045123:3375-3394 | Msa1465300:CDS | 45.0% |
| ! | ATGGAGTTGGTTGTTGCTGT+TGG | + | tig0045123:3439-3458 | Msa1465300:CDS | 45.0% |
| ! | TGGAGTTGGTTGTTGCTGTT+GGG | + | tig0045123:3440-3459 | Msa1465300:CDS | 45.0% |
| GCATGGCAACGTTACAATCA+TGG | + | tig0045123:1952-1971 | Msa1465300:five_prime_UTR | 45.0% | |
| CATCAGTGAAGTGGTGAACA+TGG | + | tig0045123:3193-3212 | Msa1465300:CDS | 45.0% | |
| ! | ACATGGAGCAAAAAAGGCGT+TGG | + | tig0045123:3210-3229 | Msa1465300:CDS | 45.0% |
| !! | TAAGTACACGTACCGGTTCA+TGG | + | tig0045123:3343-3362 | Msa1465300:CDS | 45.0% |
| ! | CTGGTTTGACAGAGGATTAC+TGG | + | tig0045123:3375-3394 | Msa1465300:CDS | 45.0% |
| ! | ATGGAGTTGGTTGTTGCTGT+TGG | + | tig0045123:3439-3458 | Msa1465300:CDS | 45.0% |
| ! | TGGAGTTGGTTGTTGCTGTT+GGG | + | tig0045123:3440-3459 | Msa1465300:CDS | 45.0% |
| ACACAACACAAGATGGCGCA+TGG | + | tig0045123:1935-1954 | Msa1465300:five_prime_UTR | 50.0% | |
| AACGTTACAATCATGGCGCG+TGG | + | tig0045123:1959-1978 | Msa1465300:five_prime_UTR | 50.0% | |
| GGCAGTGGAAGAATCCATGA+TGG | - | tig0045123:2252-2271 | Msa1465300:intergenic | 50.0% | |
| TTCCACTGCCACCAACAATC+AGG | + | tig0045123:2262-2281 | Msa1465300:CDS | 50.0% | |
| !! | TACCTGATTGTTGGTGGCAG+TGG | - | tig0045123:2267-2286 | Msa1465300:intergenic | 50.0% |
| TGTGATCCAGTTGATTGGCG+TGG | + | tig0045123:3259-3278 | Msa1465300:CDS | 50.0% | |
| GTGATCCAGTTGATTGGCGT+GGG | + | tig0045123:3260-3279 | Msa1465300:CDS | 50.0% | |
| CAAAACCCACGCCAATCAAC+TGG | - | tig0045123:3268-3287 | Msa1465300:intergenic | 50.0% | |
| !! | GTACCGGTTCATGGAGAATG+AGG | + | tig0045123:3352-3371 | Msa1465300:CDS | 50.0% |
| CAGCCTCATTCTCCATGAAC+CGG | - | tig0045123:3358-3377 | Msa1465300:intergenic | 50.0% | |
| !! | GAATGAGGCTGGTTTGACAG+AGG | + | tig0045123:3367-3386 | Msa1465300:CDS | 50.0% |
| ACACAACACAAGATGGCGCA+TGG | + | tig0045123:1935-1954 | Msa1465300:five_prime_UTR | 50.0% | |
| AACGTTACAATCATGGCGCG+TGG | + | tig0045123:1959-1978 | Msa1465300:five_prime_UTR | 50.0% | |
| GGCAGTGGAAGAATCCATGA+TGG | - | tig0045123:2252-2271 | Msa1465300:intergenic | 50.0% | |
| TTCCACTGCCACCAACAATC+AGG | + | tig0045123:2262-2281 | Msa1465300:CDS | 50.0% | |
| !! | TACCTGATTGTTGGTGGCAG+TGG | - | tig0045123:2267-2286 | Msa1465300:intergenic | 50.0% |
| TGTGATCCAGTTGATTGGCG+TGG | + | tig0045123:3259-3278 | Msa1465300:CDS | 50.0% | |
| GTGATCCAGTTGATTGGCGT+GGG | + | tig0045123:3260-3279 | Msa1465300:CDS | 50.0% | |
| CAAAACCCACGCCAATCAAC+TGG | - | tig0045123:3268-3287 | Msa1465300:intergenic | 50.0% | |
| !! | GTACCGGTTCATGGAGAATG+AGG | + | tig0045123:3352-3371 | Msa1465300:CDS | 50.0% |
| CAGCCTCATTCTCCATGAAC+CGG | - | tig0045123:3358-3377 | Msa1465300:intergenic | 50.0% | |
| !! | GAATGAGGCTGGTTTGACAG+AGG | + | tig0045123:3367-3386 | Msa1465300:CDS | 50.0% |
| !! | GGCGTTGGCACGATGTATTC+TGG | + | tig0045123:3225-3244 | Msa1465300:CDS | 55.0% |
| CGGTTCATGGAGAATGAGGC+TGG | + | tig0045123:3356-3375 | Msa1465300:CDS | 55.0% | |
| GGACTGCTCTTGGATGGAGT+TGG | + | tig0045123:3426-3445 | Msa1465300:CDS | 55.0% | |
| GCGCGCAATCCAGATGATGA+AGG | + | tig0045123:3466-3485 | Msa1465300:CDS | 55.0% | |
| !! | GGCGTTGGCACGATGTATTC+TGG | + | tig0045123:3225-3244 | Msa1465300:CDS | 55.0% |
| CGGTTCATGGAGAATGAGGC+TGG | + | tig0045123:3356-3375 | Msa1465300:CDS | 55.0% | |
| GGACTGCTCTTGGATGGAGT+TGG | + | tig0045123:3426-3445 | Msa1465300:CDS | 55.0% | |
| GCGCGCAATCCAGATGATGA+AGG | + | tig0045123:3466-3485 | Msa1465300:CDS | 55.0% | |
| TGGCCACTCTATGCTGTCGC+TGG | + | tig0045123:3395-3414 | Msa1465300:CDS | 60.0% | |
| CCACTCTATGCTGTCGCTGG+CGG | + | tig0045123:3398-3417 | Msa1465300:CDS | 60.0% | |
| GCGTTGGGACTGCTCTTGGA+TGG | + | tig0045123:3420-3439 | Msa1465300:CDS | 60.0% | |
| TGGCCACTCTATGCTGTCGC+TGG | + | tig0045123:3395-3414 | Msa1465300:CDS | 60.0% | |
| CCACTCTATGCTGTCGCTGG+CGG | + | tig0045123:3398-3417 | Msa1465300:CDS | 60.0% | |
| GCGTTGGGACTGCTCTTGGA+TGG | + | tig0045123:3420-3439 | Msa1465300:CDS | 60.0% | |
| CCGCCAGCGACAGCATAGAG+TGG | - | tig0045123:3401-3420 | Msa1465300:intergenic | 65.0% | |
| TATGCTGTCGCTGGCGGCGT+TGG | + | tig0045123:3404-3423 | Msa1465300:CDS | 65.0% | |
| ATGCTGTCGCTGGCGGCGTT+GGG | + | tig0045123:3405-3424 | Msa1465300:CDS | 65.0% | |
| CCGCCAGCGACAGCATAGAG+TGG | - | tig0045123:3401-3420 | Msa1465300:intergenic | 65.0% | |
| TATGCTGTCGCTGGCGGCGT+TGG | + | tig0045123:3404-3423 | Msa1465300:CDS | 65.0% | |
| ATGCTGTCGCTGGCGGCGTT+GGG | + | tig0045123:3405-3424 | Msa1465300:CDS | 65.0% | |
| ! | GGCGGCGTTGGGACTGCTCT+TGG | + | tig0045123:3416-3435 | Msa1465300:CDS | 70.0% |
| ! | GGCGGCGTTGGGACTGCTCT+TGG | + | tig0045123:3416-3435 | Msa1465300:CDS | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| tig0045123 | gene | 1890 | 3490 | 1890 | ID=Msa1465300;Name=Msa1465300 |
| tig0045123 | mRNA | 1890 | 3490 | 1890 | ID=Msa1465300-mRNA-1;Parent=Msa1465300;Name=Msa1465300-mRNA-1;_AED=0.00;_eAED=0.00;_QI=349|1|1|1|1|1|2|0|124 |
| tig0045123 | exon | 1890 | 2283 | 1890 | ID=Msa1465300-mRNA-1:exon:24747;Parent=Msa1465300-mRNA-1 |
| tig0045123 | exon | 3164 | 3490 | 3164 | ID=Msa1465300-mRNA-1:exon:24748;Parent=Msa1465300-mRNA-1 |
| tig0045123 | five_prime_UTR | 1890 | 2238 | 1890 | ID=Msa1465300-mRNA-1:five_prime_utr;Parent=Msa1465300-mRNA-1 |
| tig0045123 | CDS | 2239 | 2283 | 2239 | ID=Msa1465300-mRNA-1:cds;Parent=Msa1465300-mRNA-1 |
| tig0045123 | CDS | 3164 | 3490 | 3164 | ID=Msa1465300-mRNA-1:cds;Parent=Msa1465300-mRNA-1 |
| Gene Sequence |
| Protein sequence |
