Alfalfa Gene Editing Database
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0357290 | XP_013459327.1 | 76.172 | 1578 | 287 | 10 | 37 | 1566 | 108 | 1644 | 0.0 | 2383 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0357290 | sp|O15050|TRNK1_HUMAN | 34.278 | 388 | 225 | 11 | 1179 | 1550 | 1305 | 1678 | 1.83e-44 | 181 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0357290 | G8A365 | 76.172 | 1578 | 287 | 10 | 37 | 1566 | 108 | 1644 | 0.0 | 2383 |
Gene ID | Type | Classification |
---|
Gene ID | Type | Classification |
---|
Co-expression Network
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
Msa0003700 | Msa0357290 | 0.811971 | 5.360251e-51 | -8.615850e-47 |
Msa0006110 | Msa0357290 | 0.804639 | 1.961347e-49 | -8.615850e-47 |
Msa0015390 | Msa0357290 | 0.809004 | 2.343993e-50 | -8.615850e-47 |
Msa0017510 | Msa0357290 | 0.846425 | 2.190111e-59 | -8.615850e-47 |
Msa0036140 | Msa0357290 | 0.820613 | 6.251918e-53 | -8.615850e-47 |
Msa0052680 | Msa0357290 | 0.807056 | 6.088983e-50 | -8.615850e-47 |
Msa0052730 | Msa0357290 | 0.825957 | 3.530640e-54 | -8.615850e-47 |
Msa0080090 | Msa0357290 | 0.804261 | 2.351145e-49 | -8.615850e-47 |
Msa0084080 | Msa0357290 | 0.811485 | 6.838925e-51 | -8.615850e-47 |
Msa0110970 | Msa0357290 | 0.804641 | 1.959204e-49 | -8.615850e-47 |
Msa0123300 | Msa0357290 | 0.809171 | 2.158847e-50 | -8.615850e-47 |
Msa0140780 | Msa0357290 | 0.802446 | 5.589865e-49 | -8.615850e-47 |
Msa0151180 | Msa0357290 | 0.802968 | 4.360636e-49 | -8.615850e-47 |
Msa0152400 | Msa0357290 | 0.804852 | 1.770082e-49 | -8.615850e-47 |
Msa0157290 | Msa0357290 | 0.846781 | 1.751089e-59 | -8.615850e-47 |
Msa0205510 | Msa0357290 | 0.818665 | 1.741382e-52 | -8.615850e-47 |
Msa0211150 | Msa0357290 | 0.812975 | 3.234909e-51 | -8.615850e-47 |
Msa0212990 | Msa0357290 | 0.833173 | 6.208272e-56 | -8.615850e-47 |
Msa0213520 | Msa0357290 | 0.824680 | 7.077551e-54 | -8.615850e-47 |
Msa0224780 | Msa0357290 | 0.825269 | 5.139472e-54 | -8.615850e-47 |
Msa0237070 | Msa0357290 | 0.806011 | 1.011688e-49 | -8.615850e-47 |
Msa0237310 | Msa0357290 | 0.827995 | 1.149873e-54 | -8.615850e-47 |
Msa0243100 | Msa0357290 | 0.829256 | 5.699708e-55 | -8.615850e-47 |
Msa0244860 | Msa0357290 | 0.800566 | 1.357125e-48 | -8.615850e-47 |
Msa0258310 | Msa0357290 | 0.837345 | 5.491850e-57 | -8.615850e-47 |
Msa0259500 | Msa0357290 | 0.812238 | 4.687683e-51 | -8.615850e-47 |
Msa0260780 | Msa0357290 | 0.820565 | 6.412137e-53 | -8.615850e-47 |
Msa0261340 | Msa0357290 | 0.813407 | 2.599781e-51 | -8.615850e-47 |
Msa0274730 | Msa0357290 | 0.828417 | 9.093228e-55 | -8.615850e-47 |
Msa0283450 | Msa0357290 | 0.812470 | 4.171688e-51 | -8.615850e-47 |
Msa0284410 | Msa0357290 | 0.807335 | 5.316238e-50 | -8.615850e-47 |
Msa0287410 | Msa0357290 | 0.810844 | 9.419621e-51 | -8.615850e-47 |
Msa0287650 | Msa0357290 | 0.827395 | 1.602316e-54 | -8.615850e-47 |
Msa0292930 | Msa0357290 | 0.810094 | 1.367570e-50 | -8.615850e-47 |
Msa0305700 | Msa0357290 | 0.805843 | 1.097436e-49 | -8.615850e-47 |
Msa0315530 | Msa0357290 | 0.829015 | 6.519705e-55 | -8.615850e-47 |
Msa0322690 | Msa0357290 | 0.807539 | 4.812244e-50 | -8.615850e-47 |
Msa0330340 | Msa0357290 | 0.845090 | 5.043540e-59 | -8.615850e-47 |
Msa0332000 | Msa0357290 | 0.802570 | 5.270581e-49 | -8.615850e-47 |
Msa0336320 | Msa0357290 | 0.804999 | 1.649159e-49 | -8.615850e-47 |
Msa0341540 | Msa0357290 | 0.826519 | 2.594130e-54 | -8.615850e-47 |
Msa0357290 | Msa0357320 | 0.872584 | 2.842557e-67 | -8.615850e-47 |
Msa0357290 | Msa0357340 | 0.858370 | 8.630450e-63 | -8.615850e-47 |
Msa0357290 | Msa0357350 | 0.911575 | 5.209407e-83 | -8.615850e-47 |
Msa0357290 | Msa0363790 | 0.822846 | 1.904135e-53 | -8.615850e-47 |
Msa0357290 | Msa0367870 | 0.812841 | 3.460878e-51 | -8.615850e-47 |
Msa0357290 | Msa0376350 | 0.824856 | 6.435592e-54 | -8.615850e-47 |
Msa0357290 | Msa0381610 | -0.817095 | 3.937988e-52 | -8.615850e-47 |
Msa0357290 | Msa0385840 | 0.802332 | 5.898434e-49 | -8.615850e-47 |
Msa0357290 | Msa0392510 | 0.818826 | 1.600688e-52 | -8.615850e-47 |
Msa0357290 | Msa0393080 | 0.807204 | 5.666856e-50 | -8.615850e-47 |
Msa0357290 | Msa0410650 | 0.848188 | 7.187497e-60 | -8.615850e-47 |
Msa0357290 | Msa0411390 | 0.822684 | 2.076219e-53 | -8.615850e-47 |
Msa0357290 | Msa0417270 | 0.809809 | 1.575178e-50 | -8.615850e-47 |
Msa0357290 | Msa0417880 | 0.804957 | 1.683052e-49 | -8.615850e-47 |
Msa0357290 | Msa0424790 | 0.812000 | 5.284270e-51 | -8.615850e-47 |
Msa0357290 | Msa0425170 | 0.802415 | 5.672869e-49 | -8.615850e-47 |
Msa0357290 | Msa0426640 | 0.801875 | 7.324207e-49 | -8.615850e-47 |
Msa0357290 | Msa0439970 | 0.826799 | 2.224224e-54 | -8.615850e-47 |
Msa0357290 | Msa0440750 | 0.812351 | 4.428478e-51 | -8.615850e-47 |
Msa0357290 | Msa0455760 | 0.813113 | 3.016499e-51 | -8.615850e-47 |
Msa0357290 | Msa0464680 | 0.836244 | 1.048596e-56 | -8.615850e-47 |
Msa0357290 | Msa0467060 | 0.805282 | 1.439050e-49 | -8.615850e-47 |
Msa0357290 | Msa0475790 | 0.826326 | 2.884874e-54 | -8.615850e-47 |
Msa0357290 | Msa0481530 | 0.814322 | 1.633962e-51 | -8.615850e-47 |
Msa0357290 | Msa0484650 | 0.800570 | 1.354430e-48 | -8.615850e-47 |
Msa0357290 | Msa0488560 | 0.827605 | 1.426351e-54 | -8.615850e-47 |
Msa0357290 | Msa0495320 | 0.808300 | 3.313779e-50 | -8.615850e-47 |
Msa0357290 | Msa0503060 | 0.808961 | 2.393823e-50 | -8.615850e-47 |
Msa0357290 | Msa0507680 | 0.844821 | 5.961359e-59 | -8.615850e-47 |
Msa0357290 | Msa0509610 | 0.801135 | 1.038453e-48 | -8.615850e-47 |
Msa0357290 | Msa0516170 | 0.820355 | 7.167655e-53 | -8.615850e-47 |
Msa0357290 | Msa0529890 | 0.814647 | 1.384945e-51 | -8.615850e-47 |
Msa0357290 | Msa0531180 | 0.815234 | 1.026095e-51 | -8.615850e-47 |
Msa0357290 | Msa0585300 | 0.805046 | 1.612979e-49 | -8.615850e-47 |
Msa0357290 | Msa0585560 | 0.819197 | 1.317847e-52 | -8.615850e-47 |
Msa0357290 | Msa0589510 | 0.801001 | 1.106353e-48 | -8.615850e-47 |
Msa0357290 | Msa0601750 | 0.811232 | 7.759849e-51 | -8.615850e-47 |
Msa0357290 | Msa0607910 | 0.801059 | 1.076441e-48 | -8.615850e-47 |
Msa0357290 | Msa0616070 | 0.815836 | 7.538908e-52 | -8.615850e-47 |
Msa0357290 | Msa0625720 | 0.815889 | 7.336284e-52 | -8.615850e-47 |
Msa0357290 | Msa0627450 | 0.808594 | 2.868958e-50 | -8.615850e-47 |
Msa0357290 | Msa0629450 | 0.801665 | 8.087489e-49 | -8.615850e-47 |
Msa0357290 | Msa0633700 | 0.821062 | 4.930367e-53 | -8.615850e-47 |
Msa0357290 | Msa0648880 | 0.813593 | 2.366384e-51 | -8.615850e-47 |
Msa0357290 | Msa0655560 | 0.803963 | 2.712591e-49 | -8.615850e-47 |
Msa0357290 | Msa0657970 | 0.811054 | 8.482452e-51 | -8.615850e-47 |
Msa0357290 | Msa0663390 | 0.819923 | 9.001235e-53 | -8.615850e-47 |
Msa0357290 | Msa0667050 | 0.802665 | 5.036000e-49 | -8.615850e-47 |
Msa0357290 | Msa0669320 | 0.845603 | 3.664317e-59 | -8.615850e-47 |
Msa0357290 | Msa0681250 | 0.805061 | 1.601250e-49 | -8.615850e-47 |
Msa0357290 | Msa0681270 | 0.811108 | 8.253951e-51 | -8.615850e-47 |
Msa0357290 | Msa0683510 | 0.802707 | 4.938424e-49 | -8.615850e-47 |
Msa0357290 | Msa0685750 | 0.821831 | 3.276104e-53 | -8.615850e-47 |
Msa0357290 | Msa0688070 | 0.814722 | 1.332967e-51 | -8.615850e-47 |
Msa0357290 | Msa0691380 | 0.811925 | 5.486919e-51 | -8.615850e-47 |
Msa0357290 | Msa0692040 | -0.824257 | 8.903865e-54 | -8.615850e-47 |
Msa0357290 | Msa0701900 | 0.816084 | 6.635606e-52 | -8.615850e-47 |
Msa0357290 | Msa0703050 | 0.812376 | 4.373962e-51 | -8.615850e-47 |
Msa0357290 | Msa0721280 | 0.807391 | 5.171428e-50 | -8.615850e-47 |
Msa0357290 | Msa0723990 | 0.811586 | 6.502265e-51 | -8.615850e-47 |
Msa0357290 | Msa0727710 | 0.801180 | 1.016975e-48 | -8.615850e-47 |
Msa0357290 | Msa0729720 | 0.801175 | 1.019099e-48 | -8.615850e-47 |
Msa0357290 | Msa0731940 | 0.800808 | 1.211288e-48 | -8.615850e-47 |
Msa0357290 | Msa0740510 | 0.823542 | 1.310007e-53 | -8.615850e-47 |
Msa0357290 | Msa0762970 | 0.820453 | 6.803189e-53 | -8.615850e-47 |
Msa0357290 | Msa0764570 | 0.822103 | 2.832735e-53 | -8.615850e-47 |
Msa0357290 | Msa0767300 | 0.807839 | 4.154962e-50 | -8.615850e-47 |
Msa0357290 | Msa0769920 | 0.806555 | 7.772786e-50 | -8.615850e-47 |
Msa0357290 | Msa0807930 | 0.803820 | 2.904009e-49 | -8.615850e-47 |
Msa0357290 | Msa0816710 | 0.830145 | 3.462634e-55 | -8.615850e-47 |
Msa0357290 | Msa0820770 | 0.823307 | 1.485927e-53 | -8.615850e-47 |
Msa0357290 | Msa0822870 | 0.811533 | 6.675508e-51 | -8.615850e-47 |
Msa0357290 | Msa0828560 | 0.801281 | 9.693804e-49 | -8.615850e-47 |
Msa0357290 | Msa0832340 | 0.842231 | 2.934233e-58 | -8.615850e-47 |
Msa0357290 | Msa0834770 | 0.810852 | 9.380853e-51 | -8.615850e-47 |
Msa0357290 | Msa0838580 | 0.814386 | 1.581679e-51 | -8.615850e-47 |
Msa0357290 | Msa0844490 | 0.805531 | 1.276376e-49 | -8.615850e-47 |
Msa0357290 | Msa0844570 | 0.812014 | 5.246838e-51 | -8.615850e-47 |
Msa0357290 | Msa0849100 | 0.802832 | 4.652067e-49 | -8.615850e-47 |
Msa0357290 | Msa0861090 | 0.824405 | 8.214995e-54 | -8.615850e-47 |
Msa0357290 | Msa0861870 | 0.800122 | 1.671265e-48 | -8.615850e-47 |
Msa0357290 | Msa0875290 | 0.807968 | 3.899911e-50 | -8.615850e-47 |
Msa0357290 | Msa0878290 | 0.805159 | 1.527252e-49 | -8.615850e-47 |
Msa0357290 | Msa0880140 | 0.841732 | 3.975153e-58 | -8.615850e-47 |
Msa0357290 | Msa0908050 | 0.809712 | 1.652637e-50 | -8.615850e-47 |
Msa0357290 | Msa0933100 | 0.816461 | 5.463893e-52 | -8.615850e-47 |
Msa0357290 | Msa0944030 | 0.802576 | 5.253989e-49 | -8.615850e-47 |
Msa0357290 | Msa0945110 | 0.821097 | 4.838892e-53 | -8.615850e-47 |
Msa0357290 | Msa0947660 | 0.807905 | 4.021644e-50 | -8.615850e-47 |
Msa0357290 | Msa0952120 | 0.810587 | 1.070209e-50 | -8.615850e-47 |
Msa0357290 | Msa0964310 | 0.804506 | 2.090783e-49 | -8.615850e-47 |
Msa0357290 | Msa0965360 | 0.804898 | 1.732047e-49 | -8.615850e-47 |
Msa0357290 | Msa0967380 | 0.808348 | 3.236947e-50 | -8.615850e-47 |
Msa0357290 | Msa0969520 | 0.815636 | 8.352359e-52 | -8.615850e-47 |
Msa0357290 | Msa1004550 | 0.813763 | 2.170667e-51 | -8.615850e-47 |
Msa0357290 | Msa1004600 | 0.811605 | 6.440634e-51 | -8.615850e-47 |
Msa0357290 | Msa1005870 | 0.802399 | 5.714442e-49 | -8.615850e-47 |
Msa0357290 | Msa1016320 | 0.808043 | 3.760037e-50 | -8.615850e-47 |
Msa0357290 | Msa1019000 | 0.838080 | 3.555810e-57 | -8.615850e-47 |
Msa0357290 | Msa1030970 | 0.810012 | 1.424031e-50 | -8.615850e-47 |
Msa0357290 | Msa1041670 | 0.815238 | 1.024060e-51 | -8.615850e-47 |
Msa0357290 | Msa1043370 | 0.801391 | 9.204942e-49 | -8.615850e-47 |
Msa0357290 | Msa1075540 | 0.817870 | 2.635135e-52 | -8.615850e-47 |
Msa0357290 | Msa1081330 | 0.801010 | 1.101631e-48 | -8.615850e-47 |
Msa0357290 | Msa1082500 | 0.801820 | 7.518663e-49 | -8.615850e-47 |
Msa0357290 | Msa1085200 | 0.850782 | 1.358875e-60 | -8.615850e-47 |
Msa0357290 | Msa1100050 | 0.803369 | 3.602690e-49 | -8.615850e-47 |
Msa0357290 | Msa1108160 | 0.806095 | 9.713115e-50 | -8.615850e-47 |
Msa0357290 | Msa1121490 | 0.808007 | 3.825738e-50 | -8.615850e-47 |
Msa0357290 | Msa1131220 | 0.801500 | 8.746112e-49 | -8.615850e-47 |
Msa0357290 | Msa1137570 | 0.812414 | 4.290629e-51 | -8.615850e-47 |
Msa0357290 | Msa1147740 | 0.818521 | 1.877352e-52 | -8.615850e-47 |
Msa0357290 | Msa1151910 | 0.835910 | 1.274436e-56 | -8.615850e-47 |
Msa0357290 | Msa1154710 | 0.803934 | 2.750394e-49 | -8.615850e-47 |
Msa0357290 | Msa1166560 | 0.817384 | 3.391537e-52 | -8.615850e-47 |
Msa0357290 | Msa1173100 | 0.826164 | 3.152108e-54 | -8.615850e-47 |
Msa0357290 | Msa1189070 | 0.820440 | 6.851672e-53 | -8.615850e-47 |
Msa0357290 | Msa1196440 | 0.814938 | 1.193873e-51 | -8.615850e-47 |
Msa0357290 | Msa1199570 | 0.823578 | 1.284702e-53 | -8.615850e-47 |
Msa0357290 | Msa1199830 | -0.804250 | 2.364304e-49 | -8.615850e-47 |
Msa0357290 | Msa1209460 | 0.808102 | 3.652721e-50 | -8.615850e-47 |
Msa0357290 | Msa1212940 | 0.806001 | 1.016771e-49 | -8.615850e-47 |
Msa0357290 | Msa1224480 | 0.816143 | 6.435607e-52 | -8.615850e-47 |
Msa0357290 | Msa1243490 | 0.807193 | 5.696491e-50 | -8.615850e-47 |
Msa0357290 | Msa1279400 | 0.802712 | 4.925439e-49 | -8.615850e-47 |
Msa0357290 | Msa1283860 | 0.811391 | 7.167432e-51 | -8.615850e-47 |
Msa0357290 | Msa1284680 | 0.801141 | 1.035928e-48 | -8.615850e-47 |
Msa0357290 | Msa1297290 | 0.822756 | 1.997456e-53 | -8.615850e-47 |
Msa0357290 | Msa1299960 | 0.801702 | 7.949484e-49 | -8.615850e-47 |
Msa0357290 | Msa1308380 | 0.801058 | 1.076953e-48 | -8.615850e-47 |
Msa0357290 | Msa1322890 | 0.802326 | 5.915457e-49 | -8.615850e-47 |
Msa0357290 | Msa1324500 | 0.827508 | 1.504774e-54 | -8.615850e-47 |
Msa0357290 | Msa1327680 | 0.804936 | 1.700130e-49 | -8.615850e-47 |
Msa0357290 | Msa1328710 | 0.823770 | 1.157931e-53 | -8.615850e-47 |
Msa0357290 | Msa1331000 | 0.817051 | 4.028617e-52 | -8.615850e-47 |
Msa0357290 | Msa1353470 | 0.819996 | 8.659134e-53 | -8.615850e-47 |
Msa0357290 | Msa1353980 | 0.804845 | 1.776702e-49 | -8.615850e-47 |
Msa0357290 | Msa1357890 | 0.803233 | 3.843259e-49 | -8.615850e-47 |
Msa0357290 | Msa1359040 | 0.804507 | 2.089452e-49 | -8.615850e-47 |
Msa0357290 | Msa1370070 | -0.808381 | 3.185411e-50 | -8.615850e-47 |
Msa0357290 | Msa1372760 | 0.809568 | 1.774342e-50 | -8.615850e-47 |
Msa0357290 | Msa1374550 | 0.804837 | 1.782905e-49 | -8.615850e-47 |
Msa0357290 | Msa1377760 | 0.810915 | 9.091146e-51 | -8.615850e-47 |
Msa0357290 | Msa1385000 | 0.821175 | 4.643701e-53 | -8.615850e-47 |
Msa0357290 | Msa1392820 | 0.812043 | 5.171165e-51 | -8.615850e-47 |
Msa0357290 | Msa1398090 | 0.807484 | 4.942639e-50 | -8.615850e-47 |
Msa0357290 | Msa1402400 | 0.803481 | 3.414362e-49 | -8.615850e-47 |
Msa0357290 | Msa1409870 | 0.814420 | 1.554524e-51 | -8.615850e-47 |
Msa0357290 | Msa1410210 | 0.804129 | 2.505033e-49 | -8.615850e-47 |
Msa0357290 | Msa1423880 | 0.812241 | 4.679952e-51 | -8.615850e-47 |
Msa0357290 | Msa1438250 | 0.801968 | 7.008831e-49 | -8.615850e-47 |
Msa0357290 | Msa1444210 | 0.859952 | 2.897048e-63 | -8.615850e-47 |
Msa0357290 | Msa1448640 | 0.800044 | 1.733606e-48 | -8.615850e-47 |
Msa0357290 | Msa1452240 | 0.807359 | 5.252771e-50 | -8.615850e-47 |
Msa0357290 | Msa1460050 | 0.806758 | 7.042486e-50 | -8.615850e-47 |
Msa0357290 | Msa1465300 | 0.806135 | 9.526163e-50 | -8.615850e-47 |
Msa0357290 | Msa1466540 | 0.831539 | 1.576609e-55 | -8.615850e-47 |
PPI
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0357290 | MtrunA17_Chr8g0375181 | 49.144 | 1636 | 654 | 30 | 59 | 1564 | 179 | 1766 | 0.0 | 1428 |
Msa0357290 | MtrunA17_Chr8g0375191 | 48.804 | 1631 | 652 | 31 | 57 | 1564 | 119 | 1689 | 0.0 | 1419 |
Msa0357290 | MtrunA17_Chr3g0094211 | 74.232 | 912 | 216 | 6 | 37 | 947 | 108 | 1001 | 0.0 | 1389 |
Msa0357290 | MtrunA17_Chr8g0375151 | 47.770 | 1637 | 658 | 32 | 59 | 1564 | 75 | 1645 | 0.0 | 1364 |
Msa0357290 | MtrunA17_Chr3g0094221 | 81.346 | 654 | 73 | 3 | 960 | 1566 | 7 | 658 | 0.0 | 1024 |
Msa0357290 | MtrunA17_Chr3g0109541 | 40.000 | 805 | 400 | 17 | 63 | 808 | 116 | 896 | 1.10e-172 | 543 |
Msa0357290 | MtrunA17_Chr5g0433471 | 37.845 | 798 | 409 | 18 | 64 | 804 | 124 | 891 | 3.28e-153 | 491 |
Msa0357290 | MtrunA17_Chr5g0433371 | 35.879 | 825 | 425 | 17 | 64 | 821 | 118 | 905 | 1.77e-147 | 476 |
Msa0357290 | MtrunA17_Chr5g0433321 | 35.642 | 794 | 447 | 20 | 64 | 821 | 116 | 881 | 9.97e-147 | 473 |
Msa0357290 | MtrunA17_Chr5g0435821 | 42.700 | 637 | 232 | 13 | 701 | 1259 | 6 | 587 | 3.58e-143 | 452 |
Msa0357290 | MtrunA17_Chr5g0433361 | 37.436 | 780 | 402 | 18 | 64 | 809 | 140 | 867 | 3.25e-142 | 460 |
Msa0357290 | MtrunA17_Chr3g0109551 | 40.187 | 642 | 329 | 14 | 343 | 963 | 481 | 1088 | 9.11e-134 | 443 |
Msa0357290 | MtrunA17_Chr3g0109551 | 34.797 | 296 | 175 | 9 | 61 | 345 | 110 | 398 | 1.46e-39 | 160 |
Msa0357290 | MtrunA17_Chr8g0375871 | 42.114 | 596 | 237 | 11 | 1038 | 1564 | 663 | 1219 | 4.05e-131 | 447 |
Msa0357290 | MtrunA17_Chr8g0375871 | 41.414 | 594 | 309 | 12 | 19 | 592 | 85 | 659 | 5.09e-118 | 409 |
Msa0357290 | MtrunA17_Chr8g0375861 | 42.114 | 596 | 237 | 11 | 1038 | 1564 | 663 | 1219 | 6.00e-131 | 446 |
Msa0357290 | MtrunA17_Chr8g0375861 | 41.414 | 594 | 309 | 12 | 19 | 592 | 85 | 659 | 5.96e-118 | 409 |
Msa0357290 | MtrunA17_Chr5g0433421 | 49.275 | 345 | 165 | 4 | 481 | 822 | 653 | 990 | 1.26e-96 | 336 |
Msa0357290 | MtrunA17_Chr5g0433421 | 35.052 | 291 | 165 | 9 | 64 | 344 | 116 | 392 | 2.15e-32 | 137 |
Msa0357290 | MtrunA17_Chr5g0433511 | 41.514 | 436 | 215 | 8 | 369 | 802 | 492 | 889 | 7.72e-94 | 326 |
Msa0357290 | MtrunA17_Chr5g0433511 | 34.194 | 310 | 161 | 12 | 61 | 344 | 117 | 409 | 1.58e-30 | 131 |
Msa0357290 | MtrunA17_Chr5g0433341 | 50.000 | 184 | 91 | 1 | 487 | 669 | 5 | 188 | 4.50e-59 | 201 |
Msa0357290 | MtrunA17_Chr8g0343741 | 35.179 | 307 | 190 | 8 | 489 | 791 | 966 | 1267 | 6.56e-47 | 185 |
Msa0357290 | MtrunA17_Chr5g0422511 | 30.576 | 399 | 262 | 9 | 400 | 792 | 364 | 753 | 2.69e-43 | 171 |
Msa0357290 | MtrunA17_Chr5g0433331 | 51.825 | 137 | 66 | 0 | 671 | 807 | 1 | 137 | 4.90e-41 | 149 |
Msa0357290 | MtrunA17_Chr1g0173701 | 30.341 | 323 | 205 | 6 | 507 | 812 | 84 | 403 | 1.19e-40 | 155 |
Msa0357290 | MtrunA17_Chr2g0334291 | 37.063 | 286 | 162 | 7 | 519 | 790 | 1791 | 2072 | 1.81e-40 | 164 |
Msa0357290 | MtrunA17_Chr5g0433351 | 30.676 | 414 | 246 | 14 | 26 | 423 | 80 | 468 | 1.61e-38 | 151 |
Msa0357290 | MtrunA17_Chr5g0400101 | 38.060 | 268 | 147 | 6 | 519 | 778 | 641 | 897 | 3.42e-38 | 156 |
Msa0357290 | MtrunA17_Chr7g0257921 | 29.870 | 308 | 189 | 11 | 495 | 790 | 347 | 639 | 2.18e-24 | 110 |
Msa0357290 | MtrunA17_Chr5g0394941 | 28.863 | 343 | 185 | 14 | 482 | 781 | 489 | 815 | 8.40e-23 | 106 |
Msa0357290 | MtrunA17_Chr2g0304151 | 28.779 | 344 | 190 | 13 | 483 | 787 | 490 | 817 | 9.63e-23 | 105 |
Msa0357290 | MtrunA17_Chr1g0165651 | 27.134 | 328 | 212 | 9 | 483 | 794 | 621 | 937 | 1.85e-20 | 98.6 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0357290 | AT1G65810.1 | 38.427 | 903 | 498 | 21 | 70 | 956 | 128 | 988 | 0.0 | 573 |
Msa0357290 | AT1G65810.3 | 38.427 | 903 | 498 | 21 | 70 | 956 | 128 | 988 | 0.0 | 572 |
Msa0357290 | AT1G65810.2 | 37.251 | 902 | 476 | 21 | 70 | 956 | 128 | 954 | 1.08e-168 | 536 |
Msa0357290 | AT1G65780.1 | 37.128 | 940 | 504 | 22 | 65 | 962 | 108 | 1002 | 5.67e-162 | 519 |
Msa0357290 | AT5G37150.1 | 37.817 | 788 | 410 | 17 | 64 | 826 | 107 | 839 | 3.13e-149 | 478 |
Msa0357290 | AT5G52090.1 | 39.736 | 682 | 357 | 12 | 145 | 806 | 8 | 655 | 9.33e-149 | 471 |
Msa0357290 | AT5G37140.1 | 39.162 | 692 | 371 | 14 | 133 | 806 | 12 | 671 | 6.11e-145 | 461 |
Msa0357290 | AT4G05540.1 | 38.286 | 700 | 359 | 17 | 110 | 773 | 27 | 689 | 3.21e-137 | 440 |
Msa0357290 | AT5G37165.1 | 49.847 | 327 | 160 | 3 | 481 | 804 | 78 | 403 | 5.18e-103 | 337 |
Msa0357290 | AT5G37030.1 | 54.514 | 288 | 126 | 4 | 516 | 800 | 348 | 633 | 4.07e-93 | 316 |
Msa0357290 | AT5G37030.1 | 31.276 | 243 | 125 | 6 | 156 | 394 | 167 | 371 | 1.28e-20 | 99.0 |
Msa0357290 | AT2G19120.1 | 36.808 | 307 | 185 | 8 | 489 | 791 | 746 | 1047 | 3.04e-48 | 189 |
Msa0357290 | AT4G30100.2 | 36.667 | 300 | 176 | 7 | 495 | 788 | 916 | 1207 | 2.64e-45 | 180 |
Msa0357290 | AT4G30100.1 | 36.667 | 300 | 176 | 7 | 495 | 788 | 916 | 1207 | 2.64e-45 | 180 |
Msa0357290 | AT4G15570.2 | 31.962 | 316 | 210 | 5 | 479 | 792 | 357 | 669 | 1.41e-44 | 174 |
Msa0357290 | AT4G15570.4 | 31.962 | 316 | 210 | 5 | 479 | 792 | 357 | 669 | 1.41e-44 | 174 |
Msa0357290 | AT4G15570.3 | 31.962 | 316 | 210 | 5 | 479 | 792 | 446 | 758 | 2.15e-44 | 175 |
Msa0357290 | AT4G15570.1 | 31.962 | 316 | 210 | 5 | 479 | 792 | 446 | 758 | 2.15e-44 | 175 |
Msa0357290 | AT1G16800.3 | 35.842 | 279 | 159 | 6 | 519 | 784 | 1649 | 1920 | 2.94e-38 | 158 |
Msa0357290 | AT1G16800.2 | 35.842 | 279 | 159 | 6 | 519 | 784 | 1719 | 1990 | 3.01e-38 | 158 |
Msa0357290 | AT1G16800.1 | 35.842 | 279 | 159 | 6 | 519 | 784 | 1607 | 1878 | 3.25e-38 | 157 |
Msa0357290 | AT5G47010.1 | 33.828 | 337 | 187 | 9 | 453 | 778 | 598 | 909 | 4.72e-38 | 156 |
Msa0357290 | AT5G37160.1 | 31.855 | 248 | 141 | 6 | 135 | 354 | 181 | 428 | 5.14e-31 | 129 |
Msa0357290 | AT2G03270.1 | 29.688 | 320 | 189 | 13 | 491 | 794 | 339 | 638 | 1.04e-23 | 108 |
Msa0357290 | AT1G05460.2 | 28.788 | 330 | 190 | 11 | 483 | 778 | 491 | 809 | 7.11e-22 | 103 |
Msa0357290 | AT5G35970.1 | 30.094 | 319 | 190 | 12 | 492 | 791 | 638 | 942 | 1.28e-21 | 102 |
Msa0357290 | AT1G05460.1 | 28.788 | 330 | 190 | 11 | 483 | 778 | 491 | 809 | 1.78e-21 | 102 |
Msa0357290 | AT1G08840.2 | 28.195 | 266 | 161 | 9 | 520 | 769 | 1037 | 1288 | 1.35e-14 | 80.1 |
Msa0357290 | AT1G08840.4 | 28.195 | 266 | 161 | 9 | 520 | 769 | 1050 | 1301 | 1.36e-14 | 80.1 |
Msa0357290 | AT1G08840.3 | 28.195 | 266 | 161 | 9 | 520 | 769 | 1053 | 1304 | 1.48e-14 | 80.1 |
Msa0357290 | AT1G08840.1 | 28.195 | 266 | 161 | 9 | 520 | 769 | 1018 | 1269 | 1.52e-14 | 80.1 |
Find 245 sgRNAs with CRISPR-Local
Find 387 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
TTCTCTTCTTGATAAGTTTC+TGG | 0.062862 | 3_1:-38976149 | None:intergenic |
ATTCTACAATAAAGCTTATT+TGG | 0.079007 | 3_1:+38975443 | Msa0357290:CDS |
AAAGATTCTAAAACAATTTA+AGG | 0.080813 | 3_1:+38977898 | Msa0357290:CDS |
TAGGCATTGTTTATGGATTT+TGG | 0.099052 | 3_1:+38977352 | Msa0357290:intron |
GCTATTCGTGATTGTCTTTC+TGG | 0.100211 | 3_1:+38975403 | Msa0357290:CDS |
TTTGGAAACAAGCTTATTTC+TGG | 0.135032 | 3_1:-38976662 | None:intergenic |
GTGGAGACTAGTTTGGTTTA+TGG | 0.141597 | 3_1:+38979839 | Msa0357290:CDS |
CCTCCGAATCTGATGATTTA+TGG | 0.150983 | 3_1:+38975326 | Msa0357290:CDS |
GTGCAAGGGCCTTCAATTTA+AGG | 0.163196 | 3_1:+38980054 | Msa0357290:CDS |
TGCAAATCATTCACTGATTC+AGG | 0.178217 | 3_1:-38974586 | None:intergenic |
TTTGAAAGGTTAAGTTTATT+TGG | 0.184568 | 3_1:+38976599 | Msa0357290:CDS |
TCATTGCTAGGCATTGTTTA+TGG | 0.202173 | 3_1:+38977345 | Msa0357290:intron |
CTCGAGTTTCTTCCAATAAA+TGG | 0.204479 | 3_1:-38974337 | None:intergenic |
TTATACACACACACATTTCT+AGG | 0.213334 | 3_1:-38974076 | None:intergenic |
TCTAGAAGATATTTCAAAAT+TGG | 0.224789 | 3_1:+38978009 | Msa0357290:CDS |
ATCTTACAAATACCATTTAT+TGG | 0.237606 | 3_1:+38974325 | Msa0357290:CDS |
TTCTACAATAAAGCTTATTT+GGG | 0.242111 | 3_1:+38975444 | Msa0357290:CDS |
ATTTGTATCTTAACTCATTA+AGG | 0.242316 | 3_1:-38974720 | None:intergenic |
AAGGCCCTTGCACTCTAAAA+TGG | 0.255682 | 3_1:-38980044 | None:intergenic |
GTTTGTAATGAAGCTGGTTT+TGG | 0.261210 | 3_1:+38976566 | Msa0357290:CDS |
AACAAAACAAATCGCCAATT+TGG | 0.267389 | 3_1:-38975621 | None:intergenic |
AACATTACCTGGAGATGTTT+TGG | 0.273184 | 3_1:+38974546 | Msa0357290:CDS |
GTGGCTGTTGAAAGCGTTTA+TGG | 0.276768 | 3_1:+38978732 | Msa0357290:CDS |
TGGGAACATTGGAGGGTTTA+GGG | 0.280701 | 3_1:+38979940 | Msa0357290:CDS |
CTCATTCAGGTTGAGAAGAT+TGG | 0.290156 | 3_1:+38974269 | Msa0357290:intron |
GTGGGAACATTGGAGGGTTT+AGG | 0.295908 | 3_1:+38979939 | Msa0357290:CDS |
CTGAAGAGAAGTTCTGTAAT+TGG | 0.300387 | 3_1:-38977178 | None:intergenic |
TGCAGAGATTTGGAAGGTTT+TGG | 0.306462 | 3_1:+38974605 | Msa0357290:CDS |
GCACAACTTCTACTTCCTTT+AGG | 0.312309 | 3_1:+38976292 | Msa0357290:CDS |
GTGAATGATTTGCAGAGATT+TGG | 0.313705 | 3_1:+38974595 | Msa0357290:CDS |
GAAATAATGTCACATATAAA+AGG | 0.314158 | 3_1:+38979236 | Msa0357290:intron |
AAACTCGGTAATAAACGTTT+TGG | 0.317849 | 3_1:+38977811 | Msa0357290:CDS |
AAAGATAGCTTTAGCCATTT+CGG | 0.322684 | 3_1:-38977471 | None:intergenic |
ACACATTTCTAGGACCGTTT+TGG | 0.323846 | 3_1:-38974066 | None:intergenic |
TTGTTGGTGACGTTGAGTTC+TGG | 0.325902 | 3_1:+38978822 | Msa0357290:CDS |
ATTGTTTGCTGCAAAGAAAA+AGG | 0.328726 | 3_1:+38978076 | Msa0357290:CDS |
TGTGTTCATTGATGAAGTTC+AGG | 0.340598 | 3_1:+38979490 | Msa0357290:CDS |
AGATTGATCTAATTCTTTCA+TGG | 0.343502 | 3_1:-38977498 | None:intergenic |
GAATCACTTTGTGGCCAAAT+TGG | 0.349067 | 3_1:+38975607 | Msa0357290:CDS |
CGGAAGAAGTTATAAGAATA+TGG | 0.354427 | 3_1:+38976823 | Msa0357290:CDS |
AACTCTGTCAAGTGAATGTT+TGG | 0.355195 | 3_1:-38976199 | None:intergenic |
ATACTACCTTTACAACTTCC+AGG | 0.359585 | 3_1:+38976390 | Msa0357290:CDS |
TGAGTGTCAACTTTCTTCTA+TGG | 0.366111 | 3_1:+38976440 | Msa0357290:CDS |
TATTCTTTCATAAATGTTGC+CGG | 0.367566 | 3_1:+38976776 | Msa0357290:CDS |
CTCCGAATCTGATGATTTAT+GGG | 0.370064 | 3_1:+38975327 | Msa0357290:CDS |
GCTGCTGTTTACACAACCTT+TGG | 0.373018 | 3_1:-38977781 | None:intergenic |
GAAGAAATCGTGCGCCTTGT+TGG | 0.377349 | 3_1:+38980001 | Msa0357290:CDS |
TACAGTAGGCAATATCTTCC+AGG | 0.381051 | 3_1:+38976737 | Msa0357290:CDS |
TTTAGTACTTGTCCAGCATA+TGG | 0.382651 | 3_1:-38977033 | None:intergenic |
TGTTCATTTGTTAACTCAAA+TGG | 0.386474 | 3_1:-38978600 | None:intergenic |
CTGTAGCATGTTTGAACATT+CGG | 0.391528 | 3_1:-38976719 | None:intergenic |
TCTCTTCTTGATAAGTTTCT+GGG | 0.391767 | 3_1:-38976148 | None:intergenic |
CTGATGTTTGATTTGACATT+GGG | 0.392100 | 3_1:+38979074 | Msa0357290:CDS |
ATCTTTCAATTGCAATGCTC+TGG | 0.395556 | 3_1:-38975923 | None:intergenic |
TAATGCCAGAGGATTCTTCT+TGG | 0.397792 | 3_1:+38976106 | Msa0357290:CDS |
CTCATACACCAAGCACCTTA+TGG | 0.398328 | 3_1:+38974383 | Msa0357290:CDS |
TCCTTGATTGCAATGTTTGT+TGG | 0.398449 | 3_1:-38975553 | None:intergenic |
GTTGAAGGTGGAGACTAGTT+TGG | 0.400621 | 3_1:+38979832 | Msa0357290:CDS |
GAGTCCATCACTCACTATCT+TGG | 0.400903 | 3_1:+38974302 | Msa0357290:CDS |
ATTTGGGGTCCTCCTGGGAC+TGG | 0.401612 | 3_1:+38975460 | Msa0357290:CDS |
CCAGGTGATATGCTGTTGTT+TGG | 0.401768 | 3_1:+38975646 | Msa0357290:CDS |
AATGATAGACTTGATGTTAG+AGG | 0.405269 | 3_1:+38975673 | Msa0357290:CDS |
TGACAATGTTTGGAAGAGTT+TGG | 0.411964 | 3_1:+38977400 | Msa0357290:CDS |
GGCAACATTTATGAAAGAAT+AGG | 0.415373 | 3_1:-38976774 | None:intergenic |
AAGCTTATTTGGGGTCCTCC+TGG | 0.417322 | 3_1:+38975454 | Msa0357290:CDS |
GTGAATGTGAAATCAATTGA+TGG | 0.418723 | 3_1:+38977108 | Msa0357290:CDS |
AAGAAATCGTGCGCCTTGTT+GGG | 0.421241 | 3_1:+38980002 | Msa0357290:CDS |
ACCATGTTTCTTCTTTCAAA+AGG | 0.425023 | 3_1:+38978865 | Msa0357290:CDS |
TAGGGAAGATCAAGTAATCT+TGG | 0.425862 | 3_1:+38979958 | Msa0357290:CDS |
CATGAAGGAAAATAATTTGT+TGG | 0.426320 | 3_1:+38980232 | Msa0357290:CDS |
TTGCTTCTTCTCCTTTGAAA+AGG | 0.426422 | 3_1:+38980186 | Msa0357290:CDS |
TTCTCCTTTGAAAAGGCGAT+GGG | 0.427960 | 3_1:+38980193 | Msa0357290:CDS |
ATTCACTTGACAGAGTTGAT+TGG | 0.429132 | 3_1:+38976205 | Msa0357290:CDS |
TTCTGGAGTTTCTGAGAGAA+AGG | 0.429666 | 3_1:+38975893 | Msa0357290:CDS |
GGACTGGAGGTGCTACGTTC+AGG | 0.431216 | 3_1:+38977961 | Msa0357290:CDS |
CCTAGGAGTACATTTGTACT+AGG | 0.432067 | 3_1:+38978642 | Msa0357290:CDS |
CGGCCAGTACGTGTGTAATC+TGG | 0.432524 | 3_1:-38978555 | None:intergenic |
GTGAATTACAGTGGCGATGA+TGG | 0.434161 | 3_1:+38977078 | Msa0357290:CDS |
AGAATGGCGTGATTGATTCC+TGG | 0.437136 | 3_1:-38976408 | None:intergenic |
TTTAAGGTTTGTAATGAAGC+TGG | 0.440489 | 3_1:+38976560 | Msa0357290:intron |
TCCAACAAACATTGCAATCA+AGG | 0.441330 | 3_1:+38975552 | Msa0357290:CDS |
AGAAGATTGATCTTACATCT+TGG | 0.442831 | 3_1:-38979628 | None:intergenic |
GCGCTTCCTGGCCAGCTCAA+TGG | 0.443131 | 3_1:-38978393 | None:intergenic |
GCAACATTTATGAAAGAATA+GGG | 0.443437 | 3_1:-38976773 | None:intergenic |
AAGGCGCACGATTTCTTCCT+TGG | 0.446342 | 3_1:-38979996 | None:intergenic |
GAATTTCCATTGAGCTGGCC+AGG | 0.447514 | 3_1:+38978387 | Msa0357290:CDS |
CTAGAGCAAGGAAGAGGTTG+TGG | 0.447577 | 3_1:+38980345 | Msa0357290:CDS |
TTGTGAAATGTTATCACAAG+TGG | 0.453309 | 3_1:-38979044 | None:intergenic |
ATCAATCACGCCATTCTTGT+TGG | 0.455018 | 3_1:+38976414 | Msa0357290:CDS |
CTTCTCCTTTGAAAAGGCGA+TGG | 0.455090 | 3_1:+38980192 | Msa0357290:CDS |
AGTCCTGCAACCTTGCCATA+AGG | 0.458867 | 3_1:-38974398 | None:intergenic |
AGAGCTACATTTGTTCTTTG+CGG | 0.460542 | 3_1:-38977213 | None:intergenic |
ATTCTAAAACAATTTAAGGT+TGG | 0.461529 | 3_1:+38977902 | Msa0357290:CDS |
AGCTTATTTGGGGTCCTCCT+GGG | 0.462087 | 3_1:+38975455 | Msa0357290:CDS |
GGGGATACAGCTCAAACAAT+TGG | 0.465389 | 3_1:+38979584 | Msa0357290:CDS |
TTCATAGATTGTATAACAAT+AGG | 0.467858 | 3_1:-38979869 | None:intergenic |
GGCATAGTTTCTCCATATGC+TGG | 0.469815 | 3_1:+38977021 | Msa0357290:CDS |
ATCCCATAAATCATCAGATT+CGG | 0.471434 | 3_1:-38975329 | None:intergenic |
AATTAAACCATTCTCACCTA+TGG | 0.472466 | 3_1:-38978973 | None:intergenic |
AGAACATAACTATAGGTACT+TGG | 0.473489 | 3_1:+38975990 | Msa0357290:CDS |
TCTGATGTTTGATTTGACAT+TGG | 0.474682 | 3_1:+38979073 | Msa0357290:CDS |
TTCAAGAGACGTTGTTTCAA+GGG | 0.474769 | 3_1:+38976040 | Msa0357290:CDS |
AAATTCAATTGACATGTTGA+AGG | 0.475198 | 3_1:+38979817 | Msa0357290:CDS |
AAGATCAAGTAATCTTGGTA+AGG | 0.476025 | 3_1:+38979963 | Msa0357290:CDS |
ACAAGTGGATAAATGTTAGT+TGG | 0.476468 | 3_1:-38979029 | None:intergenic |
TGCAGGTCCATAGGTGAGAA+TGG | 0.477793 | 3_1:+38978966 | Msa0357290:intron |
TATCTTCCAGGGCCAATGTA+TGG | 0.483128 | 3_1:+38976749 | Msa0357290:CDS |
AGAAACTTTGTGCAGCCTAA+AGG | 0.488611 | 3_1:-38976307 | None:intergenic |
CCTAGTACAAATGTACTCCT+AGG | 0.488986 | 3_1:-38978642 | None:intergenic |
TTTCAAGAGACGTTGTTTCA+AGG | 0.489965 | 3_1:+38976039 | Msa0357290:CDS |
ACCGGTGTTACGGCAATTGT+TGG | 0.491504 | 3_1:+38978806 | Msa0357290:CDS |
AGATCAAGAGACCGGTGTTA+CGG | 0.491548 | 3_1:+38978796 | Msa0357290:CDS |
TTGCAAATGGGTGGAGACCT+AGG | 0.492496 | 3_1:+38977840 | Msa0357290:CDS |
TTATGCACTCATTTACCAAT+GGG | 0.496233 | 3_1:+38975958 | Msa0357290:CDS |
TTCTGTGCTGCATGTTGAGA+AGG | 0.497973 | 3_1:-38976634 | None:intergenic |
GAACAAATGTAGCTCTTACA+AGG | 0.498795 | 3_1:+38977220 | Msa0357290:CDS |
GTTGAGACAATGAAGGTTGA+AGG | 0.499098 | 3_1:+38980464 | Msa0357290:CDS |
ATCAATCTCTTCTCTTCCAC+CGG | 0.499780 | 3_1:-38976795 | None:intergenic |
GTTAGTTGGAAGATCAGAAA+AGG | 0.499830 | 3_1:-38979015 | None:intergenic |
TGCAAATGGGTGGAGACCTA+GGG | 0.503466 | 3_1:+38977841 | Msa0357290:CDS |
ATAGAGAATGGCCAGCTCAA+TGG | 0.504299 | 3_1:-38978330 | None:intergenic |
CTCCTTTGAAAAGGCGATGG+GGG | 0.507076 | 3_1:+38980195 | Msa0357290:CDS |
TGGTAGAATTTCCATTGAGC+TGG | 0.507474 | 3_1:+38978319 | Msa0357290:CDS |
TGGTAGAATTTCCATTGAGC+TGG | 0.507474 | 3_1:+38978382 | Msa0357290:CDS |
ACACTCATCGCCAACAAGAA+TGG | 0.508254 | 3_1:-38976424 | None:intergenic |
TGTAGCATGGCTTGCTACAA+AGG | 0.508780 | 3_1:+38976984 | Msa0357290:intron |
TTGGGAGAAGCTTATTTGAA+AGG | 0.508811 | 3_1:+38976585 | Msa0357290:CDS |
GAGGAGTTAAGAATAGAGAA+TGG | 0.509056 | 3_1:-38978342 | None:intergenic |
CAAGAGCTTGTTTCCCAACA+AGG | 0.511125 | 3_1:-38980015 | None:intergenic |
TCATGGAGAACGAGATGATA+AGG | 0.512190 | 3_1:+38975830 | Msa0357290:CDS |
TTATTTCCTTGCAGGTCCAT+AGG | 0.512817 | 3_1:+38978957 | Msa0357290:intron |
TGAACTAAAACAACTGTATG+TGG | 0.514070 | 3_1:+38980316 | Msa0357290:CDS |
TTGATTCCTGGAAGTTGTAA+AGG | 0.516880 | 3_1:-38976396 | None:intergenic |
GTACTAGGTCGGTCAGGTAC+AGG | 0.517698 | 3_1:+38978657 | Msa0357290:CDS |
GTTATGCACTCATTTACCAA+TGG | 0.517745 | 3_1:+38975957 | Msa0357290:CDS |
GGTTACAACGGTGGGAACAT+TGG | 0.518954 | 3_1:+38979929 | Msa0357290:CDS |
ACAACCTTTGGAATGATCTA+CGG | 0.519590 | 3_1:-38977769 | None:intergenic |
CAACCTTGCCATAAGGTGCT+TGG | 0.520426 | 3_1:-38974391 | None:intergenic |
TAGGGACCATACATTGGCCC+TGG | 0.522828 | 3_1:-38976755 | None:intergenic |
ATCGTTAGAGAATCACTTTG+TGG | 0.523252 | 3_1:+38975598 | Msa0357290:CDS |
CAATAGAGATAGTGAAGGAC+TGG | 0.523411 | 3_1:+38977945 | Msa0357290:CDS |
GCCAAAACCAAAACATCTCC+AGG | 0.525677 | 3_1:-38974553 | None:intergenic |
AAATACCAAGAAGAATCCTC+TGG | 0.527799 | 3_1:-38976111 | None:intergenic |
ACAACGGTGGGAACATTGGA+GGG | 0.527945 | 3_1:+38979933 | Msa0357290:CDS |
TGCTGATAAAGACACCGAAA+TGG | 0.529238 | 3_1:+38977457 | Msa0357290:CDS |
ATCTTAACTCATTAAGGTCA+AGG | 0.534430 | 3_1:-38974714 | None:intergenic |
TACAACGGTGGGAACATTGG+AGG | 0.535147 | 3_1:+38979932 | Msa0357290:CDS |
GCAGAAATGGTTACAACGGT+GGG | 0.538108 | 3_1:+38979921 | Msa0357290:CDS |
TGTTTCTGATTATCACGTCA+TGG | 0.538639 | 3_1:+38975813 | Msa0357290:CDS |
TGTTCTAAAATGTGACCCAT+TGG | 0.539138 | 3_1:-38975973 | None:intergenic |
TTCTCTAGTTGAGACAATGA+AGG | 0.539182 | 3_1:+38980457 | Msa0357290:CDS |
CTTTAACTAGAGCAAGGAAG+AGG | 0.541846 | 3_1:+38980339 | Msa0357290:CDS |
TCACCAGATTACACACGTAC+TGG | 0.545198 | 3_1:+38978552 | Msa0357290:CDS |
ACAACCGTGTTCAACAGCTC+AGG | 0.547925 | 3_1:+38975722 | Msa0357290:CDS |
TTCAATTGACATGTTGAAGG+TGG | 0.552139 | 3_1:+38979820 | Msa0357290:CDS |
TTGATCTCCATCGTAGGTTG+AGG | 0.553047 | 3_1:+38979435 | Msa0357290:CDS |
ACGTTCAGGTTCTCAAGATG+TGG | 0.553409 | 3_1:+38977975 | Msa0357290:CDS |
ACATTTGTACTAGGTCGGTC+AGG | 0.555065 | 3_1:+38978651 | Msa0357290:CDS |
TGCTGTTGAGATCAAGAGAC+CGG | 0.556431 | 3_1:+38978788 | Msa0357290:CDS |
ATTGTTATACAATCTATGAA+TGG | 0.556649 | 3_1:+38979872 | Msa0357290:CDS |
GAGCCGTATAAAACATTACC+TGG | 0.556713 | 3_1:+38974535 | Msa0357290:CDS |
TGATATCTCGTTCACCACCT+TGG | 0.558113 | 3_1:-38977134 | None:intergenic |
CGTCTCTTGAAATGAGTCAA+GGG | 0.569100 | 3_1:-38976028 | None:intergenic |
TGGAAAGGCTTGCAAATGGG+TGG | 0.571283 | 3_1:+38977831 | Msa0357290:CDS |
AACAAATGTAGCTCTTACAA+GGG | 0.571720 | 3_1:+38977221 | Msa0357290:CDS |
GGCAGAAATGGTTACAACGG+TGG | 0.572779 | 3_1:+38979920 | Msa0357290:CDS |
AGCATAAAAGCAGCTGAGAG+TGG | 0.574731 | 3_1:+38979260 | Msa0357290:CDS |
GTGCATGATTCCAAGAATCG+TGG | 0.576697 | 3_1:+38977422 | Msa0357290:CDS |
ATTTCGACACTACGTCCCCT+AGG | 0.576847 | 3_1:-38977857 | None:intergenic |
ATTTGTAGAAATGTTGAAGA+GGG | 0.580895 | 3_1:+38979548 | Msa0357290:CDS |
TTGAAGAGACTAGGAACGAA+AGG | 0.581501 | 3_1:+38975853 | Msa0357290:CDS |
GAAGAGGTTGTGGATTTGTG+AGG | 0.581622 | 3_1:+38980355 | Msa0357290:CDS |
CTTCAGAAATACAATGTGGA+AGG | 0.583032 | 3_1:+38977550 | Msa0357290:CDS |
AAATCAATTGATGGTTTCCA+AGG | 0.583335 | 3_1:+38977117 | Msa0357290:CDS |
AAATATCTTCTAGAGGCACT+AGG | 0.584691 | 3_1:-38978000 | None:intergenic |
GTAAAATAGTTACCTTCCCT+AGG | 0.586024 | 3_1:+38978625 | Msa0357290:CDS |
AGATCAAGTAATCTTGGTAA+GGG | 0.588630 | 3_1:+38979964 | Msa0357290:CDS |
TACAGCTCAAACAATTGGAA+GGG | 0.590099 | 3_1:+38979589 | Msa0357290:CDS |
TCAATTGATGGTTTCCAAGG+TGG | 0.591753 | 3_1:+38977120 | Msa0357290:CDS |
ACAAAGGAGAAAGTATCCAT+TGG | 0.592137 | 3_1:+38977000 | Msa0357290:CDS |
ATGATTTGCAGAGATTTGGA+AGG | 0.593297 | 3_1:+38974599 | Msa0357290:CDS |
AGCAACTCTATGCTCAAGCA+TGG | 0.595501 | 3_1:+38974358 | Msa0357290:CDS |
CTGTAATCTAATAATGCCAG+AGG | 0.597320 | 3_1:+38976095 | Msa0357290:CDS |
CTAGTACAAATGTACTCCTA+GGG | 0.598368 | 3_1:-38978641 | None:intergenic |
GGAGTACATTTGTACTAGGT+CGG | 0.598595 | 3_1:+38978646 | Msa0357290:CDS |
ACCAACAATTGCCGTAACAC+CGG | 0.598855 | 3_1:-38978807 | None:intergenic |
AAAGAATAGGGACCATACAT+TGG | 0.600931 | 3_1:-38976761 | None:intergenic |
CCAAACAACAGCATATCACC+TGG | 0.607452 | 3_1:-38975646 | None:intergenic |
ACGTCTCTTGAAATGAGTCA+AGG | 0.607988 | 3_1:-38976029 | None:intergenic |
AGATCCAAGATAGTGAGTGA+TGG | 0.608358 | 3_1:-38974306 | None:intergenic |
ATGACTGTAGATATCCAAAA+CGG | 0.609246 | 3_1:+38974052 | Msa0357290:CDS |
GGTGATTTAGTTGAGTCTGA+AGG | 0.610182 | 3_1:+38978462 | Msa0357290:CDS |
ATAGTGAGTGATGGACTCAA+AGG | 0.612036 | 3_1:-38974297 | None:intergenic |
GAGGTTGTGGATTTGTGAGG+AGG | 0.612974 | 3_1:+38980358 | Msa0357290:CDS |
ACAGTAGGCAATATCTTCCA+GGG | 0.614126 | 3_1:+38976738 | Msa0357290:CDS |
CAACCGTGTTCAACAGCTCA+GGG | 0.615676 | 3_1:+38975723 | Msa0357290:CDS |
TCTACAATAAAGCTTATTTG+GGG | 0.616573 | 3_1:+38975445 | Msa0357290:CDS |
ATGTTCAAACATGCTACAGT+AGG | 0.617819 | 3_1:+38976723 | Msa0357290:CDS |
TTGTAATTGATCTCCATCGT+AGG | 0.618294 | 3_1:+38979429 | Msa0357290:CDS |
GAGTGGTAAGCTGAGTCGTG+AGG | 0.620826 | 3_1:+38979277 | Msa0357290:CDS |
ACAGCTCAAACAATTGGAAG+GGG | 0.621908 | 3_1:+38979590 | Msa0357290:CDS |
ATGTAGCTCTTACAAGGGCT+AGG | 0.622397 | 3_1:+38977226 | Msa0357290:CDS |
CATTTGTAGAAATGTTGAAG+AGG | 0.622542 | 3_1:+38979547 | Msa0357290:CDS |
GGAAGAGAAGAGATTGATGA+CGG | 0.622607 | 3_1:+38976800 | Msa0357290:CDS |
ATTCCCTGAGCTGTTGAACA+CGG | 0.622825 | 3_1:-38975726 | None:intergenic |
ATACAGCTCAAACAATTGGA+AGG | 0.624276 | 3_1:+38979588 | Msa0357290:CDS |
ATGATAAGGTTGAAGAGACT+AGG | 0.628362 | 3_1:+38975844 | Msa0357290:CDS |
AGTTGGTACTACTAATACAA+CGG | 0.629327 | 3_1:+38978437 | Msa0357290:CDS |
TTTCGGTCCTCAACCTACGA+TGG | 0.629683 | 3_1:-38979442 | None:intergenic |
ATGTGGCTTTAACTAGAGCA+AGG | 0.630690 | 3_1:+38980333 | Msa0357290:CDS |
GGTACTACTAATACAACGGA+GGG | 0.631396 | 3_1:+38978441 | Msa0357290:CDS |
AGTGGACTCTACATCACTGA+TGG | 0.631720 | 3_1:+38974793 | Msa0357290:CDS |
TCTCCTTTGAAAAGGCGATG+GGG | 0.633135 | 3_1:+38980194 | Msa0357290:CDS |
TACAAATGTACTCCTAGGGA+AGG | 0.633656 | 3_1:-38978637 | None:intergenic |
ATATGGAGAAACTATGCCAA+TGG | 0.634266 | 3_1:-38977016 | None:intergenic |
TTTGGCAGAAATGGTTACAA+CGG | 0.635872 | 3_1:+38979917 | Msa0357290:CDS |
ACACCAAGCACCTTATGGCA+AGG | 0.637539 | 3_1:+38974388 | Msa0357290:CDS |
TTTGTGCAACGACGATGATG+GGG | 0.637784 | 3_1:+38974840 | Msa0357290:CDS |
CGTTCAGGTTCTCAAGATGT+GGG | 0.638090 | 3_1:+38977976 | Msa0357290:CDS |
AATTCAAGAGAAACTAGCAA+GGG | 0.638178 | 3_1:+38977056 | Msa0357290:CDS |
CCATAAATCATCAGATTCGG+AGG | 0.638599 | 3_1:-38975326 | None:intergenic |
GATTATATATGAGTACATGA+AGG | 0.640035 | 3_1:+38980217 | Msa0357290:CDS |
AATTCCGTAGATCATTCCAA+AGG | 0.644231 | 3_1:+38977765 | Msa0357290:CDS |
TGAGAACGATGGTGAGAACG+TGG | 0.645019 | 3_1:+38974657 | Msa0357290:CDS |
TCTTTCATAAATGTTGCCGG+TGG | 0.646964 | 3_1:+38976779 | Msa0357290:CDS |
AAATTCAAGAGAAACTAGCA+AGG | 0.647839 | 3_1:+38977055 | Msa0357290:CDS |
TGGCCGTGATGATATTGAAG+TGG | 0.647843 | 3_1:+38978572 | Msa0357290:CDS |
TAGAGATAGTGAAGGACTGG+AGG | 0.648090 | 3_1:+38977948 | Msa0357290:CDS |
AAATGAGAAAATACACCATG+TGG | 0.657753 | 3_1:+38978713 | Msa0357290:CDS |
AAACGCTTTCAACAGCCACA+TGG | 0.667918 | 3_1:-38978728 | None:intergenic |
AATCCACTTCAATATCATCA+CGG | 0.668379 | 3_1:-38978575 | None:intergenic |
ACGTGTGTAATCTGGTGAGA+TGG | 0.674427 | 3_1:-38978547 | None:intergenic |
AGAGAAGAGATTGATGACGG+CGG | 0.675042 | 3_1:+38976803 | Msa0357290:CDS |
ATACTAAAGAATTTGCACAA+AGG | 0.677166 | 3_1:+38976869 | Msa0357290:CDS |
ATGTTTGGCAATTTCCAATG+CGG | 0.677835 | 3_1:-38976184 | None:intergenic |
GAACTTTAGTACTCATGCCG+AGG | 0.678831 | 3_1:+38979745 | Msa0357290:CDS |
GGTAAGGGATGATTCTACCA+AGG | 0.679324 | 3_1:+38979979 | Msa0357290:CDS |
GTGTTCAATAGAGATAGTGA+AGG | 0.681869 | 3_1:+38977940 | Msa0357290:CDS |
TGAAGTTCAGGATCTAACAA+TGG | 0.689609 | 3_1:+38979502 | Msa0357290:CDS |
GCAAATGGGTGGAGACCTAG+GGG | 0.697076 | 3_1:+38977842 | Msa0357290:CDS |
TGGTACTACTAATACAACGG+AGG | 0.701416 | 3_1:+38978440 | Msa0357290:CDS |
TCATCTTCAGAAATACAATG+TGG | 0.705420 | 3_1:+38977546 | Msa0357290:CDS |
CTAGCAAGGGTGAATTACAG+TGG | 0.708854 | 3_1:+38977069 | Msa0357290:CDS |
GAAAACAGGTTTATTCATCG+AGG | 0.710932 | 3_1:+38974511 | Msa0357290:intron |
TGGACAGGAGATGAGAACGA+TGG | 0.785264 | 3_1:+38974646 | Msa0357290:CDS |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!!! | TGATTTTATTTTATGTATGA+TGG | + | chr3_1:38975274-38975293 | Msa0357290:intron | 15.0% |
!!! | GATTTTATTTTATGTATGAT+GGG | + | chr3_1:38975275-38975294 | Msa0357290:intron | 15.0% |
!! | TTGCTATAAAAATATGAATT+TGG | - | chr3_1:38976683-38976702 | None:intergenic | 15.0% |
!!! | TTTTTTTTTAAATCATTGCT+AGG | + | chr3_1:38977333-38977352 | Msa0357290:intron | 15.0% |
!!! | AAAGATTCTAAAACAATTTA+AGG | + | chr3_1:38977898-38977917 | Msa0357290:CDS | 15.0% |
!!! | TTAAATTTTAGTTACAGTTA+TGG | + | chr3_1:38978162-38978181 | Msa0357290:intron | 15.0% |
!! | AGGAAATAAATTAAATTATG+AGG | - | chr3_1:38978946-38978965 | None:intergenic | 15.0% |
!!! | TTTTAAAAACCTTAAATTGA+AGG | - | chr3_1:38980066-38980085 | None:intergenic | 15.0% |
!! | GTGTATAAAATTGATATTGT+TGG | + | chr3_1:38974091-38974110 | Msa0357290:intron | 20.0% |
!! | AATAGATAGACACAAAATTA+AGG | - | chr3_1:38974246-38974265 | None:intergenic | 20.0% |
!! | ATCTTACAAATACCATTTAT+TGG | + | chr3_1:38974325-38974344 | Msa0357290:CDS | 20.0% |
!! | AAACCATTTAACAACAAAAA+CGG | + | chr3_1:38974431-38974450 | Msa0357290:intron | 20.0% |
!!! | TTATACAGTTTATTTTTGGA+CGG | - | chr3_1:38974472-38974491 | None:intergenic | 20.0% |
!!! | CAAGTTATACAGTTTATTTT+TGG | - | chr3_1:38974476-38974495 | None:intergenic | 20.0% |
!! | ATTTGTATCTTAACTCATTA+AGG | - | chr3_1:38974723-38974742 | None:intergenic | 20.0% |
!! | TTGGATCTTATAGAAAAATA+TGG | + | chr3_1:38974770-38974789 | Msa0357290:CDS | 20.0% |
!! | AGTATATAAGTGAAACTATT+TGG | - | chr3_1:38974955-38974974 | None:intergenic | 20.0% |
!! | ATTCTACAATAAAGCTTATT+TGG | + | chr3_1:38975443-38975462 | Msa0357290:CDS | 20.0% |
!! | TTCTACAATAAAGCTTATTT+GGG | + | chr3_1:38975444-38975463 | Msa0357290:CDS | 20.0% |
!!! | ACATTTTAGAACATAACTAT+AGG | + | chr3_1:38975983-38976002 | Msa0357290:CDS | 20.0% |
!! | TCACAAATGACAAATAAAAA+TGG | - | chr3_1:38976529-38976548 | None:intergenic | 20.0% |
!! | TTTGAAAGGTTAAGTTTATT+TGG | + | chr3_1:38976599-38976618 | Msa0357290:CDS | 20.0% |
!! | TGTACTTCATAAATTATATG+CGG | - | chr3_1:38976938-38976957 | None:intergenic | 20.0% |
!!! | ATTCTAAAACAATTTAAGGT+TGG | + | chr3_1:38977902-38977921 | Msa0357290:CDS | 20.0% |
!!! | AATTTTGAAATATCTTCTAG+AGG | - | chr3_1:38978010-38978029 | None:intergenic | 20.0% |
!! | TCTAGAAGATATTTCAAAAT+TGG | + | chr3_1:38978009-38978028 | Msa0357290:CDS | 20.0% |
!! | TCTACAATAATCTCATAATT+TGG | + | chr3_1:38978897-38978916 | Msa0357290:intron | 20.0% |
!!! | AATTTAATTTATTTCCTTGC+AGG | + | chr3_1:38978949-38978968 | Msa0357290:intron | 20.0% |
!! | GAAATAATGTCACATATAAA+AGG | + | chr3_1:38979236-38979255 | Msa0357290:intron | 20.0% |
!! | TTCATAGATTGTATAACAAT+AGG | - | chr3_1:38979872-38979891 | None:intergenic | 20.0% |
!! | ATTGTTATACAATCTATGAA+TGG | + | chr3_1:38979872-38979891 | Msa0357290:CDS | 20.0% |
!!! | CAATGTTTTATGTTTTTTTC+CGG | + | chr3_1:38980131-38980150 | Msa0357290:intron | 20.0% |
!! | ATGACCATAATTTTGAATTC+TGG | + | chr3_1:38974123-38974142 | Msa0357290:intron | 25.0% |
! | TCTATCTATTTATCTCATTC+AGG | + | chr3_1:38974256-38974275 | Msa0357290:intron | 25.0% |
!!! | TTACCGTTTTTGTTGTTAAA+TGG | - | chr3_1:38974437-38974456 | None:intergenic | 25.0% |
!!! | TATACAGTTTATTTTTGGAC+GGG | - | chr3_1:38974471-38974490 | None:intergenic | 25.0% |
! | CTGTATAACTTGAATATTGA+AGG | + | chr3_1:38974484-38974503 | Msa0357290:intron | 25.0% |
! | TCTTATAGAAAAATATGGAG+TGG | + | chr3_1:38974775-38974794 | Msa0357290:CDS | 25.0% |
! | TACTAAAACTGTAACAACAA+AGG | - | chr3_1:38975061-38975080 | None:intergenic | 25.0% |
! | TCTACAATAAAGCTTATTTG+GGG | + | chr3_1:38975445-38975464 | Msa0357290:CDS | 25.0% |
! | ACTGGAAAAACAAAAACTTT+AGG | + | chr3_1:38975478-38975497 | Msa0357290:CDS | 25.0% |
!! | AGATATCGAAGATATTTTCT+TGG | + | chr3_1:38975699-38975718 | Msa0357290:CDS | 25.0% |
!! | AAATGAATTTTTATCCGCAT+TGG | + | chr3_1:38976170-38976189 | Msa0357290:CDS | 25.0% |
!!! | TGTGATTGTTGTTTGTTTTA+AGG | + | chr3_1:38976544-38976563 | Msa0357290:intron | 25.0% |
! | GCAACATTTATGAAAGAATA+GGG | - | chr3_1:38976776-38976795 | None:intergenic | 25.0% |
! | TATTCTTTCATAAATGTTGC+CGG | + | chr3_1:38976776-38976795 | Msa0357290:CDS | 25.0% |
! | ATACTAAAGAATTTGCACAA+AGG | + | chr3_1:38976869-38976888 | Msa0357290:CDS | 25.0% |
!!! | TGACATATACTTACTTTTCT+TGG | + | chr3_1:38976960-38976979 | Msa0357290:intron | 25.0% |
!!! | AACATTGTCATTTTTAGCTA+GGG | - | chr3_1:38977390-38977409 | None:intergenic | 25.0% |
!!! | AAACATTGTCATTTTTAGCT+AGG | - | chr3_1:38977391-38977410 | None:intergenic | 25.0% |
! | TAGCTAAAAATGACAATGTT+TGG | + | chr3_1:38977390-38977409 | Msa0357290:CDS | 25.0% |
! | AGATTGATCTAATTCTTTCA+TGG | - | chr3_1:38977501-38977520 | None:intergenic | 25.0% |
! | TGCTGAAAAATCAATGATTA+AGG | + | chr3_1:38978497-38978516 | Msa0357290:CDS | 25.0% |
!! | TGTTCATTTGTTAACTCAAA+TGG | - | chr3_1:38978603-38978622 | None:intergenic | 25.0% |
! | ATCAATTGGGAATTAAAATG+AGG | - | chr3_1:38979185-38979204 | None:intergenic | 25.0% |
!! | ATCCAACTTTTTGATCAATT+GGG | - | chr3_1:38979198-38979217 | None:intergenic | 25.0% |
!! | AATCCAACTTTTTGATCAAT+TGG | - | chr3_1:38979199-38979218 | None:intergenic | 25.0% |
! | ACTATGAAAAAATGAAGATG+CGG | + | chr3_1:38979381-38979400 | Msa0357290:CDS | 25.0% |
! | ATTTGTAGAAATGTTGAAGA+GGG | + | chr3_1:38979548-38979567 | Msa0357290:CDS | 25.0% |
!! | AGAATCTAAAAGTCAGTTTT+TGG | + | chr3_1:38979667-38979686 | Msa0357290:CDS | 25.0% |
! | AAAAAGAATGAGAAGATGAA+AGG | + | chr3_1:38979692-38979711 | Msa0357290:CDS | 25.0% |
! | AAATTCAATTGACATGTTGA+AGG | + | chr3_1:38979817-38979836 | Msa0357290:CDS | 25.0% |
!!! | GTTTTTTTCCGGAATATTTT+AGG | + | chr3_1:38980142-38980161 | Msa0357290:intron | 25.0% |
! | TAACACATCCTAAAATATTC+CGG | - | chr3_1:38980153-38980172 | None:intergenic | 25.0% |
! | GATTATATATGAGTACATGA+AGG | + | chr3_1:38980217-38980236 | Msa0357290:CDS | 25.0% |
!! | CATGAAGGAAAATAATTTGT+TGG | + | chr3_1:38980232-38980251 | Msa0357290:CDS | 25.0% |
!! | TTTTCCCAATAAGAAAACAT+GGG | - | chr3_1:38980404-38980423 | None:intergenic | 25.0% |
ATGACTGTAGATATCCAAAA+CGG | + | chr3_1:38974052-38974071 | Msa0357290:CDS | 30.0% | |
TTATACACACACACATTTCT+AGG | - | chr3_1:38974079-38974098 | None:intergenic | 30.0% | |
ATAACTTGAATATTGAAGGC+TGG | + | chr3_1:38974488-38974507 | Msa0357290:intron | 30.0% | |
TAACTTGAATATTGAAGGCT+GGG | + | chr3_1:38974489-38974508 | Msa0357290:intron | 30.0% | |
! | TCTCCAGGTAATGTTTTATA+CGG | - | chr3_1:38974541-38974560 | None:intergenic | 30.0% |
!!! | GGTGTTTTTTGACAATTGTA+TGG | + | chr3_1:38974626-38974645 | Msa0357290:CDS | 30.0% |
! | TTTTTGACAATTGTATGGAC+AGG | + | chr3_1:38974631-38974650 | Msa0357290:CDS | 30.0% |
ATCTTAACTCATTAAGGTCA+AGG | - | chr3_1:38974717-38974736 | None:intergenic | 30.0% | |
!! | GTTGTTTTCTTGACAAATGT+TGG | + | chr3_1:38974751-38974770 | Msa0357290:CDS | 30.0% |
TAAAACTGTAACAACAAAGG+TGG | - | chr3_1:38975058-38975077 | None:intergenic | 30.0% | |
TAGAGTCAAATAATCTGCAT+AGG | + | chr3_1:38975158-38975177 | Msa0357290:intron | 30.0% | |
!! | GAACTAGTTGATGATGAAAT+TGG | + | chr3_1:38975242-38975261 | Msa0357290:intron | 30.0% |
!! | TTTTATGTATGATGGGAAAC+AGG | + | chr3_1:38975282-38975301 | Msa0357290:intron | 30.0% |
ATCCCATAAATCATCAGATT+CGG | - | chr3_1:38975332-38975351 | None:intergenic | 30.0% | |
AACAAAACAAATCGCCAATT+TGG | - | chr3_1:38975624-38975643 | None:intergenic | 30.0% | |
AATGATAGACTTGATGTTAG+AGG | + | chr3_1:38975673-38975692 | Msa0357290:CDS | 30.0% | |
!! | GAATGTTTTTCGACTTATAC+TGG | + | chr3_1:38975745-38975764 | Msa0357290:CDS | 30.0% |
TTATGCACTCATTTACCAAT+GGG | + | chr3_1:38975958-38975977 | Msa0357290:CDS | 30.0% | |
AGAACATAACTATAGGTACT+TGG | + | chr3_1:38975990-38976009 | Msa0357290:CDS | 30.0% | |
!! | TCTTCTTGGTATTTTGAGAA+TGG | + | chr3_1:38976120-38976139 | Msa0357290:CDS | 30.0% |
TCTCTTCTTGATAAGTTTCT+GGG | - | chr3_1:38976151-38976170 | None:intergenic | 30.0% | |
TTCTCTTCTTGATAAGTTTC+TGG | - | chr3_1:38976152-38976171 | None:intergenic | 30.0% | |
! | TATGAAGCCAATGAACTTTT+TGG | + | chr3_1:38976329-38976348 | Msa0357290:CDS | 30.0% |
! | TTTAAGGTTTGTAATGAAGC+TGG | + | chr3_1:38976560-38976579 | Msa0357290:intron | 30.0% |
!!! | TTTGTAATGAAGCTGGTTTT+GGG | + | chr3_1:38976567-38976586 | Msa0357290:CDS | 30.0% |
TTTGGAAACAAGCTTATTTC+TGG | - | chr3_1:38976665-38976684 | None:intergenic | 30.0% | |
GGCAACATTTATGAAAGAAT+AGG | - | chr3_1:38976777-38976796 | None:intergenic | 30.0% | |
CGGAAGAAGTTATAAGAATA+TGG | + | chr3_1:38976823-38976842 | Msa0357290:CDS | 30.0% | |
AAATTCAAGAGAAACTAGCA+AGG | + | chr3_1:38977055-38977074 | Msa0357290:CDS | 30.0% | |
AATTCAAGAGAAACTAGCAA+GGG | + | chr3_1:38977056-38977075 | Msa0357290:CDS | 30.0% | |
GTGAATGTGAAATCAATTGA+TGG | + | chr3_1:38977108-38977127 | Msa0357290:CDS | 30.0% | |
! | AAATCAATTGATGGTTTCCA+AGG | + | chr3_1:38977117-38977136 | Msa0357290:CDS | 30.0% |
AACAAATGTAGCTCTTACAA+GGG | + | chr3_1:38977221-38977240 | Msa0357290:CDS | 30.0% | |
GTAAGCATATTGAAACAGTT+CGG | + | chr3_1:38977289-38977308 | Msa0357290:intron | 30.0% | |
!! | TAGGCATTGTTTATGGATTT+TGG | + | chr3_1:38977352-38977371 | Msa0357290:intron | 30.0% |
!! | AGGCATTGTTTATGGATTTT+GGG | + | chr3_1:38977353-38977372 | Msa0357290:intron | 30.0% |
AAAGAAAAATCCACGATTCT+TGG | - | chr3_1:38977435-38977454 | None:intergenic | 30.0% | |
!! | AAAGATAGCTTTAGCCATTT+CGG | - | chr3_1:38977474-38977493 | None:intergenic | 30.0% |
TCATCTTCAGAAATACAATG+TGG | + | chr3_1:38977546-38977565 | Msa0357290:CDS | 30.0% | |
ATAAACTTCTACACTTCTTC+AGG | + | chr3_1:38977727-38977746 | Msa0357290:intron | 30.0% | |
! | AAACTCGGTAATAAACGTTT+TGG | + | chr3_1:38977811-38977830 | Msa0357290:CDS | 30.0% |
! | ATTGTTTGCTGCAAAGAAAA+AGG | + | chr3_1:38978076-38978095 | Msa0357290:CDS | 30.0% |
!! | TGCAAAGAAAAAGGTTTTGA+TGG | + | chr3_1:38978085-38978104 | Msa0357290:CDS | 30.0% |
!! | GCAAAGAAAAAGGTTTTGAT+GGG | + | chr3_1:38978086-38978105 | Msa0357290:CDS | 30.0% |
ATCCAAAAACTTAAGAGAGT+TGG | + | chr3_1:38978420-38978439 | Msa0357290:CDS | 30.0% | |
! | TACCAACTCTCTTAAGTTTT+TGG | - | chr3_1:38978425-38978444 | None:intergenic | 30.0% |
! | AGTTGGTACTACTAATACAA+CGG | + | chr3_1:38978437-38978456 | Msa0357290:CDS | 30.0% |
!! | TGATTTTTCAGCAGCATTAT+TGG | - | chr3_1:38978490-38978509 | None:intergenic | 30.0% |
AATCCACTTCAATATCATCA+CGG | - | chr3_1:38978578-38978597 | None:intergenic | 30.0% | |
AAATGAGAAAATACACCATG+TGG | + | chr3_1:38978713-38978732 | Msa0357290:CDS | 30.0% | |
ACCATGTTTCTTCTTTCAAA+AGG | + | chr3_1:38978865-38978884 | Msa0357290:CDS | 30.0% | |
!! | ACCTTTTGAAAGAAGAAACA+TGG | - | chr3_1:38978869-38978888 | None:intergenic | 30.0% |
! | TTCTTCTTTCAAAAGGTATG+CGG | + | chr3_1:38978872-38978891 | Msa0357290:intron | 30.0% |
AATTAAACCATTCTCACCTA+TGG | - | chr3_1:38978976-38978995 | None:intergenic | 30.0% | |
ACAAGTGGATAAATGTTAGT+TGG | - | chr3_1:38979032-38979051 | None:intergenic | 30.0% | |
TTGTGAAATGTTATCACAAG+TGG | - | chr3_1:38979047-38979066 | None:intergenic | 30.0% | |
!! | TCTGATGTTTGATTTGACAT+TGG | + | chr3_1:38979073-38979092 | Msa0357290:CDS | 30.0% |
!! | CTGATGTTTGATTTGACATT+GGG | + | chr3_1:38979074-38979093 | Msa0357290:CDS | 30.0% |
TTCCCAATTGATCAAAAAGT+TGG | + | chr3_1:38979193-38979212 | Msa0357290:intron | 30.0% | |
! | TACATCACCCTTGTATTTTT+CGG | - | chr3_1:38979462-38979481 | None:intergenic | 30.0% |
CATTTGTAGAAATGTTGAAG+AGG | + | chr3_1:38979547-38979566 | Msa0357290:CDS | 30.0% | |
AGAAGATTGATCTTACATCT+TGG | - | chr3_1:38979631-38979650 | None:intergenic | 30.0% | |
! | AATCCGATTCTGACAATTTT+TGG | + | chr3_1:38979899-38979918 | Msa0357290:CDS | 30.0% |
AAGATCAAGTAATCTTGGTA+AGG | + | chr3_1:38979963-38979982 | Msa0357290:CDS | 30.0% | |
AGATCAAGTAATCTTGGTAA+GGG | + | chr3_1:38979964-38979983 | Msa0357290:CDS | 30.0% | |
!!! | TTTAACCATTTTAGAGTGCA+AGG | + | chr3_1:38980039-38980058 | Msa0357290:CDS | 30.0% |
!!! | TTAACCATTTTAGAGTGCAA+GGG | + | chr3_1:38980040-38980059 | Msa0357290:CDS | 30.0% |
TGAACTAAAACAACTGTATG+TGG | + | chr3_1:38980316-38980335 | Msa0357290:CDS | 30.0% | |
! | TAAGCCCATGTTTTCTTATT+GGG | + | chr3_1:38980397-38980416 | Msa0357290:CDS | 30.0% |
! | CTTTTCCCAATAAGAAAACA+TGG | - | chr3_1:38980405-38980424 | None:intergenic | 30.0% |
GGTGCCAGAATTCAAAATTA+TGG | - | chr3_1:38974130-38974149 | None:intergenic | 35.0% | |
GCACCAATATAACTGTTTCA+GGG | + | chr3_1:38974145-38974164 | Msa0357290:intron | 35.0% | |
CACCAATATAACTGTTTCAG+GGG | + | chr3_1:38974146-38974165 | Msa0357290:intron | 35.0% | |
AACCCCTGAAACAGTTATAT+TGG | - | chr3_1:38974151-38974170 | None:intergenic | 35.0% | |
CTCGAGTTTCTTCCAATAAA+TGG | - | chr3_1:38974340-38974359 | None:intergenic | 35.0% | |
GAAAACAGGTTTATTCATCG+AGG | + | chr3_1:38974511-38974530 | Msa0357290:intron | 35.0% | |
! | AACATTACCTGGAGATGTTT+TGG | + | chr3_1:38974546-38974565 | Msa0357290:CDS | 35.0% |
!! | TGCAAATCATTCACTGATTC+AGG | - | chr3_1:38974589-38974608 | None:intergenic | 35.0% |
! | GTGAATGATTTGCAGAGATT+TGG | + | chr3_1:38974595-38974614 | Msa0357290:CDS | 35.0% |
! | ATGATTTGCAGAGATTTGGA+AGG | + | chr3_1:38974599-38974618 | Msa0357290:CDS | 35.0% |
AGTTAAGTCTCAGATGAGTT+GGG | - | chr3_1:38974998-38975017 | None:intergenic | 35.0% | |
TAGTTAAGTCTCAGATGAGT+TGG | - | chr3_1:38974999-38975018 | None:intergenic | 35.0% | |
CTCCGAATCTGATGATTTAT+GGG | + | chr3_1:38975327-38975346 | Msa0357290:CDS | 35.0% | |
TCCAACAAACATTGCAATCA+AGG | + | chr3_1:38975552-38975571 | Msa0357290:CDS | 35.0% | |
TCCTTGATTGCAATGTTTGT+TGG | - | chr3_1:38975556-38975575 | None:intergenic | 35.0% | |
ATCGTTAGAGAATCACTTTG+TGG | + | chr3_1:38975598-38975617 | Msa0357290:CDS | 35.0% | |
!! | GTTTTTCGACTTATACTGGA+TGG | + | chr3_1:38975749-38975768 | Msa0357290:CDS | 35.0% |
! | TGTTTCTGATTATCACGTCA+TGG | + | chr3_1:38975813-38975832 | Msa0357290:CDS | 35.0% |
ATGATAAGGTTGAAGAGACT+AGG | + | chr3_1:38975844-38975863 | Msa0357290:CDS | 35.0% | |
ATCTTTCAATTGCAATGCTC+TGG | - | chr3_1:38975926-38975945 | None:intergenic | 35.0% | |
GTTATGCACTCATTTACCAA+TGG | + | chr3_1:38975957-38975976 | Msa0357290:CDS | 35.0% | |
!! | TGTTCTAAAATGTGACCCAT+TGG | - | chr3_1:38975976-38975995 | None:intergenic | 35.0% |
! | TTTCAAGAGACGTTGTTTCA+AGG | + | chr3_1:38976039-38976058 | Msa0357290:CDS | 35.0% |
! | TTCAAGAGACGTTGTTTCAA+GGG | + | chr3_1:38976040-38976059 | Msa0357290:CDS | 35.0% |
CTGTAATCTAATAATGCCAG+AGG | + | chr3_1:38976095-38976114 | Msa0357290:CDS | 35.0% | |
AAATACCAAGAAGAATCCTC+TGG | - | chr3_1:38976114-38976133 | None:intergenic | 35.0% | |
ATGTTTGGCAATTTCCAATG+CGG | - | chr3_1:38976187-38976206 | None:intergenic | 35.0% | |
AACTCTGTCAAGTGAATGTT+TGG | - | chr3_1:38976202-38976221 | None:intergenic | 35.0% | |
! | ATTCACTTGACAGAGTTGAT+TGG | + | chr3_1:38976205-38976224 | Msa0357290:CDS | 35.0% |
TCGATCACCAAAAAGTTCAT+TGG | - | chr3_1:38976339-38976358 | None:intergenic | 35.0% | |
ATACTACCTTTACAACTTCC+AGG | + | chr3_1:38976390-38976409 | Msa0357290:CDS | 35.0% | |
TTGATTCCTGGAAGTTGTAA+AGG | - | chr3_1:38976399-38976418 | None:intergenic | 35.0% | |
TGAGTGTCAACTTTCTTCTA+TGG | + | chr3_1:38976440-38976459 | Msa0357290:CDS | 35.0% | |
!! | GTTTGTAATGAAGCTGGTTT+TGG | + | chr3_1:38976566-38976585 | Msa0357290:CDS | 35.0% |
TTGGGAGAAGCTTATTTGAA+AGG | + | chr3_1:38976585-38976604 | Msa0357290:CDS | 35.0% | |
! | TGCATGTTGAGAAGGTTTTT+CGG | - | chr3_1:38976629-38976648 | None:intergenic | 35.0% |
CTGTAGCATGTTTGAACATT+CGG | - | chr3_1:38976722-38976741 | None:intergenic | 35.0% | |
ATGTTCAAACATGCTACAGT+AGG | + | chr3_1:38976723-38976742 | Msa0357290:CDS | 35.0% | |
AAAGAATAGGGACCATACAT+TGG | - | chr3_1:38976764-38976783 | None:intergenic | 35.0% | |
CATGTGAGAAATTGCGAAAA+AGG | - | chr3_1:38976900-38976919 | None:intergenic | 35.0% | |
! | TACTTTTCTTGGTTGTAGCA+TGG | + | chr3_1:38976971-38976990 | Msa0357290:intron | 35.0% |
!! | ACAAAGGAGAAAGTATCCAT+TGG | + | chr3_1:38977000-38977019 | Msa0357290:CDS | 35.0% |
ATATGGAGAAACTATGCCAA+TGG | - | chr3_1:38977019-38977038 | None:intergenic | 35.0% | |
TTTAGTACTTGTCCAGCATA+TGG | - | chr3_1:38977036-38977055 | None:intergenic | 35.0% | |
CTGAAGAGAAGTTCTGTAAT+TGG | - | chr3_1:38977181-38977200 | None:intergenic | 35.0% | |
AGAGCTACATTTGTTCTTTG+CGG | - | chr3_1:38977216-38977235 | None:intergenic | 35.0% | |
GAACAAATGTAGCTCTTACA+AGG | + | chr3_1:38977220-38977239 | Msa0357290:CDS | 35.0% | |
! | TCATTGCTAGGCATTGTTTA+TGG | + | chr3_1:38977345-38977364 | Msa0357290:intron | 35.0% |
! | GGCATTGTTTATGGATTTTG+GGG | + | chr3_1:38977354-38977373 | Msa0357290:intron | 35.0% |
TGACAATGTTTGGAAGAGTT+TGG | + | chr3_1:38977400-38977419 | Msa0357290:CDS | 35.0% | |
CTTCAGAAATACAATGTGGA+AGG | + | chr3_1:38977550-38977569 | Msa0357290:CDS | 35.0% | |
AATTCCGTAGATCATTCCAA+AGG | + | chr3_1:38977765-38977784 | Msa0357290:CDS | 35.0% | |
!! | ACAACCTTTGGAATGATCTA+CGG | - | chr3_1:38977772-38977791 | None:intergenic | 35.0% |
!!! | CGGTAATAAACGTTTTGGAA+AGG | + | chr3_1:38977816-38977835 | Msa0357290:CDS | 35.0% |
!! | TTTTGGAAAGGCTTGCAAAT+GGG | + | chr3_1:38977828-38977847 | Msa0357290:CDS | 35.0% |
GTGTTCAATAGAGATAGTGA+AGG | + | chr3_1:38977940-38977959 | Msa0357290:CDS | 35.0% | |
!! | AAATATCTTCTAGAGGCACT+AGG | - | chr3_1:38978003-38978022 | None:intergenic | 35.0% |
CCAAATCATGGATTCAATTG+AGG | - | chr3_1:38978233-38978252 | None:intergenic | 35.0% | |
CCTCAATTGAATCCATGATT+TGG | + | chr3_1:38978230-38978249 | Msa0357290:intron | 35.0% | |
!! | TTGAATCCATGATTTGGTTG+TGG | + | chr3_1:38978236-38978255 | Msa0357290:intron | 35.0% |
AGAGAATAGAGTCATAGTTC+TGG | - | chr3_1:38978268-38978287 | None:intergenic | 35.0% | |
! | ACTCCTCTTTCTTTTTGAAC+AGG | + | chr3_1:38978295-38978314 | Msa0357290:intron | 35.0% |
CATCCTGTTCAAAAAGAAAG+AGG | - | chr3_1:38978301-38978320 | None:intergenic | 35.0% | |
! | CTCTTTCTTTTTGAACAGGA+TGG | + | chr3_1:38978299-38978318 | Msa0357290:intron | 35.0% |
GAGGAGTTAAGAATAGAGAA+TGG | - | chr3_1:38978282-38978301 | None:intergenic | 35.0% | |
! | ACTCCTCTTTCTTTTTGAAC+AGG | + | chr3_1:38978295-38978314 | Msa0357290:intron | 35.0% |
CATCCTGTTCAAAAAGAAAG+AGG | - | chr3_1:38978301-38978320 | None:intergenic | 35.0% | |
! | CTCTTTCTTTTTGAACAGGA+TGG | + | chr3_1:38978299-38978318 | Msa0357290:intron | 35.0% |
GTAAAATAGTTACCTTCCCT+AGG | + | chr3_1:38978625-38978644 | Msa0357290:CDS | 35.0% | |
CTAGTACAAATGTACTCCTA+GGG | - | chr3_1:38978644-38978663 | None:intergenic | 35.0% | |
! | CTCATTTTGAATCAGCTTAG+TGG | - | chr3_1:38978700-38978719 | None:intergenic | 35.0% |
GTTAGTTGGAAGATCAGAAA+AGG | - | chr3_1:38979018-38979037 | None:intergenic | 35.0% | |
! | GATTTTCTGATCTCGAGAAT+CGG | + | chr3_1:38979114-38979133 | Msa0357290:intron | 35.0% |
TGAAAAAATGAAGATGCGGA+AGG | + | chr3_1:38979385-38979404 | Msa0357290:CDS | 35.0% | |
GAAAAAATGAAGATGCGGAA+GGG | + | chr3_1:38979386-38979405 | Msa0357290:CDS | 35.0% | |
TTGTAATTGATCTCCATCGT+AGG | + | chr3_1:38979429-38979448 | Msa0357290:CDS | 35.0% | |
TTGAGGACCGAAAAATACAA+GGG | + | chr3_1:38979452-38979471 | Msa0357290:CDS | 35.0% | |
TGTGTTCATTGATGAAGTTC+AGG | + | chr3_1:38979490-38979509 | Msa0357290:CDS | 35.0% | |
TGAAGTTCAGGATCTAACAA+TGG | + | chr3_1:38979502-38979521 | Msa0357290:CDS | 35.0% | |
!! | AAGAGGGTTTTGTGTTTTGT+GGG | + | chr3_1:38979564-38979583 | Msa0357290:CDS | 35.0% |
ATACAGCTCAAACAATTGGA+AGG | + | chr3_1:38979588-38979607 | Msa0357290:CDS | 35.0% | |
TACAGCTCAAACAATTGGAA+GGG | + | chr3_1:38979589-38979608 | Msa0357290:CDS | 35.0% | |
!! | TTGTGACAATTTTAGCACCT+CGG | - | chr3_1:38979765-38979784 | None:intergenic | 35.0% |
TTCAATTGACATGTTGAAGG+TGG | + | chr3_1:38979820-38979839 | Msa0357290:CDS | 35.0% | |
CTGCCAAAAATTGTCAGAAT+CGG | - | chr3_1:38979905-38979924 | None:intergenic | 35.0% | |
!!! | CTGACAATTTTTGGCAGAAA+TGG | + | chr3_1:38979908-38979927 | Msa0357290:CDS | 35.0% |
TTTGGCAGAAATGGTTACAA+CGG | + | chr3_1:38979917-38979936 | Msa0357290:CDS | 35.0% | |
TAGGGAAGATCAAGTAATCT+TGG | + | chr3_1:38979958-38979977 | Msa0357290:CDS | 35.0% | |
! | TTGCTTCTTCTCCTTTGAAA+AGG | + | chr3_1:38980186-38980205 | Msa0357290:CDS | 35.0% |
! | CTAAGCCCATGTTTTCTTAT+TGG | + | chr3_1:38980396-38980415 | Msa0357290:CDS | 35.0% |
TTCTCTAGTTGAGACAATGA+AGG | + | chr3_1:38980457-38980476 | Msa0357290:CDS | 35.0% | |
!!! | ACACATTTCTAGGACCGTTT+TGG | - | chr3_1:38974069-38974088 | None:intergenic | 40.0% |
GGCACCAATATAACTGTTTC+AGG | + | chr3_1:38974144-38974163 | Msa0357290:intron | 40.0% | |
!! | CTCATTCAGGTTGAGAAGAT+TGG | + | chr3_1:38974269-38974288 | Msa0357290:intron | 40.0% |
!! | ATAGTGAGTGATGGACTCAA+AGG | - | chr3_1:38974300-38974319 | None:intergenic | 40.0% |
AGATCCAAGATAGTGAGTGA+TGG | - | chr3_1:38974309-38974328 | None:intergenic | 40.0% | |
ATATTGAAGGCTGGGAAAAC+AGG | + | chr3_1:38974497-38974516 | Msa0357290:intron | 40.0% | |
GAGCCGTATAAAACATTACC+TGG | + | chr3_1:38974535-38974554 | Msa0357290:CDS | 40.0% | |
!!! | ACCTGGAGATGTTTTGGTTT+TGG | + | chr3_1:38974552-38974571 | Msa0357290:CDS | 40.0% |
! | TGCAGAGATTTGGAAGGTTT+TGG | + | chr3_1:38974605-38974624 | Msa0357290:CDS | 40.0% |
! | ATTTTGTGCAACGACGATGA+TGG | + | chr3_1:38974838-38974857 | Msa0357290:CDS | 40.0% |
! | TTTTGTGCAACGACGATGAT+GGG | + | chr3_1:38974839-38974858 | Msa0357290:CDS | 40.0% |
CCATAAATCATCAGATTCGG+AGG | - | chr3_1:38975329-38975348 | None:intergenic | 40.0% | |
CCTCCGAATCTGATGATTTA+TGG | + | chr3_1:38975326-38975345 | Msa0357290:CDS | 40.0% | |
GCTATTCGTGATTGTCTTTC+TGG | + | chr3_1:38975403-38975422 | Msa0357290:CDS | 40.0% | |
!!! | GTTTTTGTTTTTCCAGTCCC+AGG | - | chr3_1:38975475-38975494 | None:intergenic | 40.0% |
GAATCACTTTGTGGCCAAAT+TGG | + | chr3_1:38975607-38975626 | Msa0357290:CDS | 40.0% | |
TCATGGAGAACGAGATGATA+AGG | + | chr3_1:38975830-38975849 | Msa0357290:CDS | 40.0% | |
TTGAAGAGACTAGGAACGAA+AGG | + | chr3_1:38975853-38975872 | Msa0357290:CDS | 40.0% | |
! | TTTTCAGCAGAAGTCGTTTC+TGG | + | chr3_1:38975876-38975895 | Msa0357290:CDS | 40.0% |
!! | TTCTGGAGTTTCTGAGAGAA+AGG | + | chr3_1:38975893-38975912 | Msa0357290:CDS | 40.0% |
CGTCTCTTGAAATGAGTCAA+GGG | - | chr3_1:38976031-38976050 | None:intergenic | 40.0% | |
ACGTCTCTTGAAATGAGTCA+AGG | - | chr3_1:38976032-38976051 | None:intergenic | 40.0% | |
TAATGCCAGAGGATTCTTCT+TGG | + | chr3_1:38976106-38976125 | Msa0357290:CDS | 40.0% | |
GCACAACTTCTACTTCCTTT+AGG | + | chr3_1:38976292-38976311 | Msa0357290:CDS | 40.0% | |
AGAAACTTTGTGCAGCCTAA+AGG | - | chr3_1:38976310-38976329 | None:intergenic | 40.0% | |
ATCAATCACGCCATTCTTGT+TGG | + | chr3_1:38976414-38976433 | Msa0357290:CDS | 40.0% | |
! | GCATGTTGAGAAGGTTTTTC+GGG | - | chr3_1:38976628-38976647 | None:intergenic | 40.0% |
TACAGTAGGCAATATCTTCC+AGG | + | chr3_1:38976737-38976756 | Msa0357290:CDS | 40.0% | |
ACAGTAGGCAATATCTTCCA+GGG | + | chr3_1:38976738-38976757 | Msa0357290:CDS | 40.0% | |
TCTTTCATAAATGTTGCCGG+TGG | + | chr3_1:38976779-38976798 | Msa0357290:CDS | 40.0% | |
ATCAATCTCTTCTCTTCCAC+CGG | - | chr3_1:38976798-38976817 | None:intergenic | 40.0% | |
GGAAGAGAAGAGATTGATGA+CGG | + | chr3_1:38976800-38976819 | Msa0357290:CDS | 40.0% | |
! | TCAATTGATGGTTTCCAAGG+TGG | + | chr3_1:38977120-38977139 | Msa0357290:CDS | 40.0% |
TGCTGATAAAGACACCGAAA+TGG | + | chr3_1:38977457-38977476 | Msa0357290:CDS | 40.0% | |
ACAGCAGCAAAGCAAAAACT+CGG | + | chr3_1:38977796-38977815 | Msa0357290:CDS | 40.0% | |
!!! | GTTTTGGAAAGGCTTGCAAA+TGG | + | chr3_1:38977827-38977846 | Msa0357290:CDS | 40.0% |
CAATAGAGATAGTGAAGGAC+TGG | + | chr3_1:38977945-38977964 | Msa0357290:CDS | 40.0% | |
!! | AATCCATGATTTGGTTGTGG+AGG | + | chr3_1:38978239-38978258 | Msa0357290:intron | 40.0% |
!! | GAATAGAGTCATAGTTCTGG+AGG | - | chr3_1:38978265-38978284 | None:intergenic | 40.0% |
TGGTAGAATTTCCATTGAGC+TGG | + | chr3_1:38978319-38978338 | Msa0357290:CDS | 40.0% | |
TGGTAGAATTTCCATTGAGC+TGG | + | chr3_1:38978319-38978338 | Msa0357290:CDS | 40.0% | |
! | TTTTGGATATTTGCGCTTCC+TGG | - | chr3_1:38978408-38978427 | None:intergenic | 40.0% |
TGGTACTACTAATACAACGG+AGG | + | chr3_1:38978440-38978459 | Msa0357290:CDS | 40.0% | |
GGTACTACTAATACAACGGA+GGG | + | chr3_1:38978441-38978460 | Msa0357290:CDS | 40.0% | |
GGTGATTTAGTTGAGTCTGA+AGG | + | chr3_1:38978462-38978481 | Msa0357290:CDS | 40.0% | |
TACAAATGTACTCCTAGGGA+AGG | - | chr3_1:38978640-38978659 | None:intergenic | 40.0% | |
CCTAGTACAAATGTACTCCT+AGG | - | chr3_1:38978645-38978664 | None:intergenic | 40.0% | |
! | CCTAGGAGTACATTTGTACT+AGG | + | chr3_1:38978642-38978661 | Msa0357290:CDS | 40.0% |
GGAGTACATTTGTACTAGGT+CGG | + | chr3_1:38978646-38978665 | Msa0357290:CDS | 40.0% | |
ATGAGGCGAAAGATTTCGTT+CGG | - | chr3_1:38978929-38978948 | None:intergenic | 40.0% | |
TTATTTCCTTGCAGGTCCAT+AGG | + | chr3_1:38978957-38978976 | Msa0357290:intron | 40.0% | |
GTTGAGGACCGAAAAATACA+AGG | + | chr3_1:38979451-38979470 | Msa0357290:CDS | 40.0% | |
!! | GAAGAGGGTTTTGTGTTTTG+TGG | + | chr3_1:38979563-38979582 | Msa0357290:CDS | 40.0% |
!! | AGAGGGTTTTGTGTTTTGTG+GGG | + | chr3_1:38979565-38979584 | Msa0357290:CDS | 40.0% |
ACAGCTCAAACAATTGGAAG+GGG | + | chr3_1:38979590-38979609 | Msa0357290:CDS | 40.0% | |
!! | GTGGAGACTAGTTTGGTTTA+TGG | + | chr3_1:38979839-38979858 | Msa0357290:CDS | 40.0% |
! | TTCTCCTTTGAAAAGGCGAT+GGG | + | chr3_1:38980193-38980212 | Msa0357290:CDS | 40.0% |
!! | ATGTGGCTTTAACTAGAGCA+AGG | + | chr3_1:38980333-38980352 | Msa0357290:CDS | 40.0% |
CTTTAACTAGAGCAAGGAAG+AGG | + | chr3_1:38980339-38980358 | Msa0357290:CDS | 40.0% | |
GTTGAGACAATGAAGGTTGA+AGG | + | chr3_1:38980464-38980483 | Msa0357290:CDS | 40.0% | |
GAGTCCATCACTCACTATCT+TGG | + | chr3_1:38974302-38974321 | Msa0357290:CDS | 45.0% | |
AGCAACTCTATGCTCAAGCA+TGG | + | chr3_1:38974358-38974377 | Msa0357290:CDS | 45.0% | |
CTCATACACCAAGCACCTTA+TGG | + | chr3_1:38974383-38974402 | Msa0357290:CDS | 45.0% | |
CAAGGTTGCAGGACTTAAAC+TGG | + | chr3_1:38974406-38974425 | Msa0357290:intron | 45.0% | |
GCCAAAACCAAAACATCTCC+AGG | - | chr3_1:38974556-38974575 | None:intergenic | 45.0% | |
! | AGTGGACTCTACATCACTGA+TGG | + | chr3_1:38974793-38974812 | Msa0357290:CDS | 45.0% |
TTTGTGCAACGACGATGATG+GGG | + | chr3_1:38974840-38974859 | Msa0357290:CDS | 45.0% | |
!! | ACGATGATGGGGTAAGAAAC+TGG | + | chr3_1:38974851-38974870 | Msa0357290:intron | 45.0% |
!! | TTTGTTTTTCCAGTCCCAGG+AGG | - | chr3_1:38975472-38975491 | None:intergenic | 45.0% |
!!! | GGCGATTTGTTTTGTTCTCC+AGG | + | chr3_1:38975628-38975647 | Msa0357290:CDS | 45.0% |
CCAAACAACAGCATATCACC+TGG | - | chr3_1:38975649-38975668 | None:intergenic | 45.0% | |
CCAGGTGATATGCTGTTGTT+TGG | + | chr3_1:38975646-38975665 | Msa0357290:CDS | 45.0% | |
ATTCCCTGAGCTGTTGAACA+CGG | - | chr3_1:38975729-38975748 | None:intergenic | 45.0% | |
! | AGAATGGCGTGATTGATTCC+TGG | - | chr3_1:38976411-38976430 | None:intergenic | 45.0% |
ACACTCATCGCCAACAAGAA+TGG | - | chr3_1:38976427-38976446 | None:intergenic | 45.0% | |
TTCTGTGCTGCATGTTGAGA+AGG | - | chr3_1:38976637-38976656 | None:intergenic | 45.0% | |
TATCTTCCAGGGCCAATGTA+TGG | + | chr3_1:38976749-38976768 | Msa0357290:CDS | 45.0% | |
!! | AGAGAAGAGATTGATGACGG+CGG | + | chr3_1:38976803-38976822 | Msa0357290:CDS | 45.0% |
!! | TGTAGCATGGCTTGCTACAA+AGG | + | chr3_1:38976984-38977003 | Msa0357290:intron | 45.0% |
GGCATAGTTTCTCCATATGC+TGG | + | chr3_1:38977021-38977040 | Msa0357290:CDS | 45.0% | |
CTAGCAAGGGTGAATTACAG+TGG | + | chr3_1:38977069-38977088 | Msa0357290:CDS | 45.0% | |
GTGAATTACAGTGGCGATGA+TGG | + | chr3_1:38977078-38977097 | Msa0357290:CDS | 45.0% | |
TGATATCTCGTTCACCACCT+TGG | - | chr3_1:38977137-38977156 | None:intergenic | 45.0% | |
ATGTAGCTCTTACAAGGGCT+AGG | + | chr3_1:38977226-38977245 | Msa0357290:CDS | 45.0% | |
GTGCATGATTCCAAGAATCG+TGG | + | chr3_1:38977422-38977441 | Msa0357290:CDS | 45.0% | |
! | GCTGCTGTTTACACAACCTT+TGG | - | chr3_1:38977784-38977803 | None:intergenic | 45.0% |
TAGAGATAGTGAAGGACTGG+AGG | + | chr3_1:38977948-38977967 | Msa0357290:CDS | 45.0% | |
! | ACGTTCAGGTTCTCAAGATG+TGG | + | chr3_1:38977975-38977994 | Msa0357290:CDS | 45.0% |
! | CGTTCAGGTTCTCAAGATGT+GGG | + | chr3_1:38977976-38977995 | Msa0357290:CDS | 45.0% |
GGATTCAATTGAGGCTGCAT+CGG | - | chr3_1:38978224-38978243 | None:intergenic | 45.0% | |
ATAGAGAATGGCCAGCTCAA+TGG | - | chr3_1:38978333-38978352 | None:intergenic | 45.0% | |
ACGTGTGTAATCTGGTGAGA+TGG | - | chr3_1:38978550-38978569 | None:intergenic | 45.0% | |
TCACCAGATTACACACGTAC+TGG | + | chr3_1:38978552-38978571 | Msa0357290:CDS | 45.0% | |
TGGCCGTGATGATATTGAAG+TGG | + | chr3_1:38978572-38978591 | Msa0357290:CDS | 45.0% | |
ACATTTGTACTAGGTCGGTC+AGG | + | chr3_1:38978651-38978670 | Msa0357290:CDS | 45.0% | |
AAACGCTTTCAACAGCCACA+TGG | - | chr3_1:38978731-38978750 | None:intergenic | 45.0% | |
!! | GTGGCTGTTGAAAGCGTTTA+TGG | + | chr3_1:38978732-38978751 | Msa0357290:CDS | 45.0% |
TGCTGTTGAGATCAAGAGAC+CGG | + | chr3_1:38978788-38978807 | Msa0357290:CDS | 45.0% | |
! | AGATCAAGAGACCGGTGTTA+CGG | + | chr3_1:38978796-38978815 | Msa0357290:CDS | 45.0% |
ACCAACAATTGCCGTAACAC+CGG | - | chr3_1:38978810-38978829 | None:intergenic | 45.0% | |
!! | TTGTTGGTGACGTTGAGTTC+TGG | + | chr3_1:38978822-38978841 | Msa0357290:CDS | 45.0% |
TCTCGAGAATCGGAAGAAGA+AGG | + | chr3_1:38979124-38979143 | Msa0357290:intron | 45.0% | |
AGCATAAAAGCAGCTGAGAG+TGG | + | chr3_1:38979260-38979279 | Msa0357290:CDS | 45.0% | |
TTGATCTCCATCGTAGGTTG+AGG | + | chr3_1:38979435-38979454 | Msa0357290:CDS | 45.0% | |
GGGGATACAGCTCAAACAAT+TGG | + | chr3_1:38979584-38979603 | Msa0357290:CDS | 45.0% | |
GAACTTTAGTACTCATGCCG+AGG | + | chr3_1:38979745-38979764 | Msa0357290:CDS | 45.0% | |
! | GTTGAAGGTGGAGACTAGTT+TGG | + | chr3_1:38979832-38979851 | Msa0357290:CDS | 45.0% |
GCAGAAATGGTTACAACGGT+GGG | + | chr3_1:38979921-38979940 | Msa0357290:CDS | 45.0% | |
TGGGAACATTGGAGGGTTTA+GGG | + | chr3_1:38979940-38979959 | Msa0357290:CDS | 45.0% | |
GGTAAGGGATGATTCTACCA+AGG | + | chr3_1:38979979-38979998 | Msa0357290:CDS | 45.0% | |
! | AAGAAATCGTGCGCCTTGTT+GGG | + | chr3_1:38980002-38980021 | Msa0357290:CDS | 45.0% |
! | CAAGAGCTTGTTTCCCAACA+AGG | - | chr3_1:38980018-38980037 | None:intergenic | 45.0% |
! | AAGGCCCTTGCACTCTAAAA+TGG | - | chr3_1:38980047-38980066 | None:intergenic | 45.0% |
GTGCAAGGGCCTTCAATTTA+AGG | + | chr3_1:38980054-38980073 | Msa0357290:CDS | 45.0% | |
! | CTTCTCCTTTGAAAAGGCGA+TGG | + | chr3_1:38980192-38980211 | Msa0357290:CDS | 45.0% |
! | TCTCCTTTGAAAAGGCGATG+GGG | + | chr3_1:38980194-38980213 | Msa0357290:CDS | 45.0% |
GAAGAGGTTGTGGATTTGTG+AGG | + | chr3_1:38980355-38980374 | Msa0357290:CDS | 45.0% | |
ACACCAAGCACCTTATGGCA+AGG | + | chr3_1:38974388-38974407 | Msa0357290:CDS | 50.0% | |
! | CAACCTTGCCATAAGGTGCT+TGG | - | chr3_1:38974394-38974413 | None:intergenic | 50.0% |
AGTCCTGCAACCTTGCCATA+AGG | - | chr3_1:38974401-38974420 | None:intergenic | 50.0% | |
TGGACAGGAGATGAGAACGA+TGG | + | chr3_1:38974646-38974665 | Msa0357290:CDS | 50.0% | |
TGAGAACGATGGTGAGAACG+TGG | + | chr3_1:38974657-38974676 | Msa0357290:CDS | 50.0% | |
! | TCAGATGAGTTGGGTCTCAG+GGG | - | chr3_1:38974989-38975008 | None:intergenic | 50.0% |
! | CTCAGATGAGTTGGGTCTCA+GGG | - | chr3_1:38974990-38975009 | None:intergenic | 50.0% |
! | TCTCAGATGAGTTGGGTCTC+AGG | - | chr3_1:38974991-38975010 | None:intergenic | 50.0% |
! | AAGCTTATTTGGGGTCCTCC+TGG | + | chr3_1:38975454-38975473 | Msa0357290:CDS | 50.0% |
! | AGCTTATTTGGGGTCCTCCT+GGG | + | chr3_1:38975455-38975474 | Msa0357290:CDS | 50.0% |
ACAACCGTGTTCAACAGCTC+AGG | + | chr3_1:38975722-38975741 | Msa0357290:CDS | 50.0% | |
CAACCGTGTTCAACAGCTCA+GGG | + | chr3_1:38975723-38975742 | Msa0357290:CDS | 50.0% | |
TGGAAAGGCTTGCAAATGGG+TGG | + | chr3_1:38977831-38977850 | Msa0357290:CDS | 50.0% | |
TTGCAAATGGGTGGAGACCT+AGG | + | chr3_1:38977840-38977859 | Msa0357290:CDS | 50.0% | |
TGCAAATGGGTGGAGACCTA+GGG | + | chr3_1:38977841-38977860 | Msa0357290:CDS | 50.0% | |
ATTTCGACACTACGTCCCCT+AGG | - | chr3_1:38977860-38977879 | None:intergenic | 50.0% | |
AGGCCTCCACAACCAAATCA+TGG | - | chr3_1:38978245-38978264 | None:intergenic | 50.0% | |
GAATTTCCATTGAGCTGGCC+AGG | + | chr3_1:38978324-38978343 | Msa0357290:CDS | 50.0% | |
!! | ACCGGTGTTACGGCAATTGT+TGG | + | chr3_1:38978806-38978825 | Msa0357290:CDS | 50.0% |
TTCTCACCTATGGACCTGCA+AGG | - | chr3_1:38978966-38978985 | None:intergenic | 50.0% | |
TGCAGGTCCATAGGTGAGAA+TGG | + | chr3_1:38978966-38978985 | Msa0357290:intron | 50.0% | |
TTTCGGTCCTCAACCTACGA+TGG | - | chr3_1:38979445-38979464 | None:intergenic | 50.0% | |
GGCAGAAATGGTTACAACGG+TGG | + | chr3_1:38979920-38979939 | Msa0357290:CDS | 50.0% | |
GGTTACAACGGTGGGAACAT+TGG | + | chr3_1:38979929-38979948 | Msa0357290:CDS | 50.0% | |
TACAACGGTGGGAACATTGG+AGG | + | chr3_1:38979932-38979951 | Msa0357290:CDS | 50.0% | |
ACAACGGTGGGAACATTGGA+GGG | + | chr3_1:38979933-38979952 | Msa0357290:CDS | 50.0% | |
GTGGGAACATTGGAGGGTTT+AGG | + | chr3_1:38979939-38979958 | Msa0357290:CDS | 50.0% | |
AAGGCGCACGATTTCTTCCT+TGG | - | chr3_1:38979999-38980018 | None:intergenic | 50.0% | |
GAAGAAATCGTGCGCCTTGT+TGG | + | chr3_1:38980001-38980020 | Msa0357290:CDS | 50.0% | |
! | CTCCTTTGAAAAGGCGATGG+GGG | + | chr3_1:38980195-38980214 | Msa0357290:CDS | 50.0% |
! | ATCCCCCATCGCCTTTTCAA+AGG | - | chr3_1:38980200-38980219 | None:intergenic | 50.0% |
CTAGAGCAAGGAAGAGGTTG+TGG | + | chr3_1:38980345-38980364 | Msa0357290:CDS | 50.0% | |
GAGGTTGTGGATTTGTGAGG+AGG | + | chr3_1:38980358-38980377 | Msa0357290:CDS | 50.0% | |
GCACCTTATGGCAAGGTTGC+AGG | + | chr3_1:38974395-38974414 | Msa0357290:intron | 55.0% | |
TAGGGACCATACATTGGCCC+TGG | - | chr3_1:38976758-38976777 | None:intergenic | 55.0% | |
GCAAATGGGTGGAGACCTAG+GGG | + | chr3_1:38977842-38977861 | Msa0357290:CDS | 55.0% | |
CGGCCAGTACGTGTGTAATC+TGG | - | chr3_1:38978558-38978577 | None:intergenic | 55.0% | |
GTACTAGGTCGGTCAGGTAC+AGG | + | chr3_1:38978657-38978676 | Msa0357290:CDS | 55.0% | |
GAGTGGTAAGCTGAGTCGTG+AGG | + | chr3_1:38979277-38979296 | Msa0357290:CDS | 55.0% | |
! | ATTTGGGGTCCTCCTGGGAC+TGG | + | chr3_1:38975460-38975479 | Msa0357290:CDS | 60.0% |
!! | GGACTGGAGGTGCTACGTTC+AGG | + | chr3_1:38977961-38977980 | Msa0357290:CDS | 60.0% |
GCGCTTCCTGGCCAGCTCAA+TGG | - | chr3_1:38978396-38978415 | None:intergenic | 65.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr3_1 | gene | 38974052 | 38980490 | 38974052 | ID=Msa0357290;Name=Msa0357290 |
chr3_1 | mRNA | 38974052 | 38980490 | 38974052 | ID=Msa0357290-mRNA-1;Parent=Msa0357290;Name=Msa0357290-mRNA-1;_AED=0.06;_eAED=0.09;_QI=0|0.36|0|0.91|1|1|12|0|1566 |
chr3_1 | exon | 38974052 | 38974086 | 38974052 | ID=Msa0357290-mRNA-1:exon:6997;Parent=Msa0357290-mRNA-1 |
chr3_1 | exon | 38974278 | 38974409 | 38974278 | ID=Msa0357290-mRNA-1:exon:6998;Parent=Msa0357290-mRNA-1 |
chr3_1 | exon | 38974519 | 38974861 | 38974519 | ID=Msa0357290-mRNA-1:exon:6999;Parent=Msa0357290-mRNA-1 |
chr3_1 | exon | 38975304 | 38976473 | 38975304 | ID=Msa0357290-mRNA-1:exon:7000;Parent=Msa0357290-mRNA-1 |
chr3_1 | exon | 38976566 | 38976890 | 38976566 | ID=Msa0357290-mRNA-1:exon:7001;Parent=Msa0357290-mRNA-1 |
chr3_1 | exon | 38976989 | 38977247 | 38976989 | ID=Msa0357290-mRNA-1:exon:7002;Parent=Msa0357290-mRNA-1 |
chr3_1 | exon | 38977355 | 38977571 | 38977355 | ID=Msa0357290-mRNA-1:exon:7003;Parent=Msa0357290-mRNA-1 |
chr3_1 | exon | 38977749 | 38978107 | 38977749 | ID=Msa0357290-mRNA-1:exon:7004;Parent=Msa0357290-mRNA-1 |
chr3_1 | exon | 38978317 | 38978886 | 38978317 | ID=Msa0357290-mRNA-1:exon:7005;Parent=Msa0357290-mRNA-1 |
chr3_1 | exon | 38978971 | 38979095 | 38978971 | ID=Msa0357290-mRNA-1:exon:7006;Parent=Msa0357290-mRNA-1 |
chr3_1 | exon | 38979237 | 38980075 | 38979237 | ID=Msa0357290-mRNA-1:exon:7007;Parent=Msa0357290-mRNA-1 |
chr3_1 | exon | 38980164 | 38980490 | 38980164 | ID=Msa0357290-mRNA-1:exon:7008;Parent=Msa0357290-mRNA-1 |
chr3_1 | CDS | 38974052 | 38974086 | 38974052 | ID=Msa0357290-mRNA-1:cds;Parent=Msa0357290-mRNA-1 |
chr3_1 | CDS | 38974278 | 38974409 | 38974278 | ID=Msa0357290-mRNA-1:cds;Parent=Msa0357290-mRNA-1 |
chr3_1 | CDS | 38974519 | 38974861 | 38974519 | ID=Msa0357290-mRNA-1:cds;Parent=Msa0357290-mRNA-1 |
chr3_1 | CDS | 38975304 | 38976473 | 38975304 | ID=Msa0357290-mRNA-1:cds;Parent=Msa0357290-mRNA-1 |
chr3_1 | CDS | 38976566 | 38976890 | 38976566 | ID=Msa0357290-mRNA-1:cds;Parent=Msa0357290-mRNA-1 |
chr3_1 | CDS | 38976989 | 38977247 | 38976989 | ID=Msa0357290-mRNA-1:cds;Parent=Msa0357290-mRNA-1 |
chr3_1 | CDS | 38977355 | 38977571 | 38977355 | ID=Msa0357290-mRNA-1:cds;Parent=Msa0357290-mRNA-1 |
chr3_1 | CDS | 38977749 | 38978107 | 38977749 | ID=Msa0357290-mRNA-1:cds;Parent=Msa0357290-mRNA-1 |
chr3_1 | CDS | 38978317 | 38978886 | 38978317 | ID=Msa0357290-mRNA-1:cds;Parent=Msa0357290-mRNA-1 |
chr3_1 | CDS | 38978971 | 38979095 | 38978971 | ID=Msa0357290-mRNA-1:cds;Parent=Msa0357290-mRNA-1 |
chr3_1 | CDS | 38979237 | 38980075 | 38979237 | ID=Msa0357290-mRNA-1:cds;Parent=Msa0357290-mRNA-1 |
chr3_1 | CDS | 38980164 | 38980490 | 38980164 | ID=Msa0357290-mRNA-1:cds;Parent=Msa0357290-mRNA-1 |
Gene Sequence |
Protein sequence |