AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0896220


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0896220 MtrunA17_Chr6g0480631 91.583 499 10 2 1 467 1 499 0.0 925
Msa0896220 MtrunA17_Chr3g0109901 68.493 511 114 6 1 467 1 508 0.0 692
Msa0896220 MtrunA17_Chr8g0375301 66.892 444 114 3 12 422 9 452 0.0 605
Msa0896220 MtrunA17_Chr5g0433931 62.592 409 113 4 99 467 1 409 0.0 514
Msa0896220 MtrunA17_Chr5g0433921 79.000 100 18 1 1 100 1 97 4.50e-50 166
Msa0896220 MtrunA17_Chr5g0432961 51.471 68 33 0 344 411 14 81 1.26e-13 67.4
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0896220 AT2G02010.1 71.515 495 100 4 1 463 1 486 0.0 720
Msa0896220 AT2G02010.2 71.515 495 100 4 1 463 53 538 0.0 719
Msa0896220 AT5G17330.1 69.941 509 104 6 1 467 1 502 0.0 702
Msa0896220 AT3G17760.2 71.487 491 101 5 12 467 8 494 0.0 702
Msa0896220 AT3G17760.1 71.487 491 101 5 12 467 8 494 0.0 702
Msa0896220 AT1G65960.2 70.659 501 106 6 1 467 1 494 0.0 695
Msa0896220 AT2G02000.1 68.421 494 115 4 1 462 1 485 0.0 692
Msa0896220 AT1G65960.1 68.207 368 80 5 134 467 1 365 3.55e-170 483
Msa0896220 AT1G65960.3 68.207 368 80 5 134 467 1 365 3.55e-170 483
Msa0896220 AT1G65960.4 68.207 368 80 5 134 467 1 365 3.55e-170 483
Msa0896220 AT3G17720.1 64.881 168 44 3 94 249 27 191 2.27e-67 214

Find 102 sgRNAs with CRISPR-Local

Find 268 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CATCTGTGTTGCAGCCATTT+TGG 0.165886 6_1:-85973892 Msa0896220:CDS
TTCCATTGTTGCTTTATCTA+TGG 0.221404 6_1:-85972509 Msa0896220:three_prime_UTR
CTGGTATTGGTTGGGTTGTT+TGG 0.223066 6_1:-85973653 Msa0896220:CDS
CTCAATACTACCAATTTATA+CGG 0.248455 6_1:-85973343 Msa0896220:CDS
AGTTGAAGAAATCACCATTT+TGG 0.255929 6_1:+85976661 None:intergenic
ATCTGATATGCTGCATCTTT+TGG 0.270173 6_1:+85976448 None:intergenic
CCGTTCTCCGTGTGGTGATT+AGG 0.272745 6_1:-85972844 Msa0896220:CDS
TCCTGTCACCACTGAGCTTC+AGG 0.282193 6_1:-85976290 Msa0896220:intron
TTCATTCATTCATATCAATA+TGG 0.292094 6_1:+85972450 None:intergenic
TAACAAGAATTATGTTGATA+TGG 0.304779 6_1:-85976320 Msa0896220:CDS
AGACTCATGCTGAGATTCTT+AGG 0.307314 6_1:-85972664 Msa0896220:CDS
CGAAACCAAGCCGTATAAAT+TGG 0.310989 6_1:+85973333 None:intergenic
GATAAGCCTAACATAGTTAC+TGG 0.334663 6_1:-85975192 Msa0896220:CDS
CGTTCTCCGTGTGGTGATTA+GGG 0.343212 6_1:-85972843 Msa0896220:CDS
TTCTAGATACGTGCGTGAAC+AGG 0.356943 6_1:-85976591 Msa0896220:CDS
GAGGCATAAAGCTGACTTAC+CGG 0.359836 6_1:-85973631 Msa0896220:CDS
GGTCTTGTTTACCCTGGTAT+TGG 0.363471 6_1:-85973666 Msa0896220:CDS
ATGCTGAGATTCTTAGGTAT+TGG 0.366104 6_1:-85972658 Msa0896220:CDS
GGTCAGCGTTGAACCCAAAA+TGG 0.377604 6_1:+85973878 None:intergenic
AATGATGAGTTGATGTTAGA+TGG 0.378531 6_1:-85976421 Msa0896220:CDS
CATCTATTCAATGCTCCTAT+TGG 0.381425 6_1:-85975333 Msa0896220:CDS
GCAGTTTCCTCTTCACCAAT+AGG 0.385794 6_1:+85975318 None:intergenic
CAGAACTCATCCAACCAAAA+TGG 0.395608 6_1:-85976675 Msa0896220:exon
ACCATTTCAACAGCTTTCAA+TGG 0.408300 6_1:+85973927 None:intergenic
TACTACCAATTTATACGGCT+TGG 0.417677 6_1:-85973338 Msa0896220:CDS
TTGTTTACCCTGGTATTGGT+TGG 0.425703 6_1:-85973662 Msa0896220:CDS
GCAGATCATCTGAGAAAATA+CGG 0.429926 6_1:-85972914 Msa0896220:CDS
AAAATACGGGTGGATAGTTC+CGG 0.431504 6_1:-85972900 Msa0896220:CDS
TGTTTACCCTGGTATTGGTT+GGG 0.431991 6_1:-85973661 Msa0896220:CDS
ACTATGTTAGGCTTATCATA+TGG 0.438480 6_1:+85975198 None:intergenic
AAGGAAGGAATTGAGAAAAC+AGG 0.440850 6_1:-85973025 Msa0896220:CDS
AACGCTGACCGGAGAGTTTG+AGG 0.448685 6_1:-85973865 Msa0896220:CDS
GTACTTTGAGGTTGAGCTAA+AGG 0.449977 6_1:-85973985 Msa0896220:intron
TGGAAAACCAAGGCTTAACT+TGG 0.451331 6_1:-85976401 Msa0896220:CDS
TTAGCTCCAGTAACTATGTT+AGG 0.451511 6_1:+85975186 None:intergenic
ATTTATACGGCTTGGTTTCG+AGG 0.462533 6_1:-85973330 Msa0896220:intron
GTATTGGTTGGGTTGTTTGG+AGG 0.473665 6_1:-85973650 Msa0896220:CDS
CAAGAGAGTTGGAGCATGCT+AGG 0.479668 6_1:-85972618 Msa0896220:exon
GCAGTAGGTGTTGGAACTGT+AGG 0.480901 6_1:-85975297 Msa0896220:CDS
TGAGGTTGAGCTAAAGGAAG+TGG 0.487043 6_1:-85973979 Msa0896220:intron
AAAGAAGCCAAGTTAAGCCT+TGG 0.490026 6_1:+85976394 None:intergenic
CAAACAACCCAACCAATACC+AGG 0.491052 6_1:+85973654 None:intergenic
CTCGCAGCATCTACATGAAT+CGG 0.494467 6_1:+85973783 None:intergenic
TCCATTGAAAGCTGTTGAAA+TGG 0.494508 6_1:-85973928 Msa0896220:CDS
GCATACATTTGATGTGTGTA+AGG 0.494596 6_1:-85972536 Msa0896220:three_prime_UTR
AAAGCAACTCACAACAATCA+AGG 0.494924 6_1:+85972567 None:intergenic
CATGTAGATGCTGCGAGTGG+CGG 0.508504 6_1:-85973777 Msa0896220:CDS
TGCGTCCGCTGGCATTGTGT+AGG 0.512284 6_1:+85972877 None:intergenic
CTTGTGGATGGCAAGAGAGT+TGG 0.513748 6_1:-85972629 Msa0896220:CDS
ACCTGAAGCTCAGTGGTGAC+AGG 0.517726 6_1:+85976289 None:intergenic
AAGGTTTAAAATTGTCTCCA+AGG 0.518110 6_1:-85973002 Msa0896220:CDS
TCCGCTGGCATTGTGTAGGC+CGG 0.520444 6_1:+85972881 None:intergenic
CAATGCTCCTATTGGTGAAG+AGG 0.522077 6_1:-85975325 Msa0896220:CDS
ACTGATCTTTGTGAAGATAG+AGG 0.525765 6_1:+85976741 None:intergenic
CTCCATAGATAAAGCAACAA+TGG 0.526759 6_1:+85972507 None:intergenic
TGAGTGTGATAAGCTTATCA+TGG 0.535116 6_1:-85976350 Msa0896220:CDS
GAGGAAACTGCAGTAGGTGT+TGG 0.536508 6_1:-85975306 Msa0896220:CDS
TTCAAAAGATGCTCATGTTG+CGG 0.538145 6_1:-85972732 Msa0896220:CDS
CCTAATCACCACACGGAGAA+CGG 0.540695 6_1:+85972844 None:intergenic
CAGTAGGTGTTGGAACTGTA+GGG 0.543728 6_1:-85975296 Msa0896220:CDS
GGAAGATTTCAGCTGCAGCT+TGG 0.547015 6_1:-85972822 Msa0896220:CDS
AAATGTGATGGAAAATTGCT+TGG 0.550366 6_1:-85973065 Msa0896220:CDS
AATGTTAGCGGTCACAAGTA+CGG 0.552630 6_1:-85973687 Msa0896220:CDS
ATATATAGATGCATGGACAT+TGG 0.552779 6_1:+85972476 None:intergenic
CACAGAGGATTACTATGTGA+TGG 0.560082 6_1:-85973952 Msa0896220:CDS
CTTCACATCCTCAAACTCTC+CGG 0.561969 6_1:+85973857 None:intergenic
GCTGCTGTCTTTCAGAGAGA+AGG 0.565353 6_1:+85972958 None:intergenic
AAAAGAACAAGGAGACAGGA+TGG 0.565661 6_1:-85973812 Msa0896220:CDS
GTGAAAAGTATCAATGTTAG+CGG 0.565895 6_1:-85973699 Msa0896220:intron
TCAGAGGCAATAATGCTAGC+TGG 0.572476 6_1:-85975270 Msa0896220:CDS
AAGTGGCACACATATGTCCT+TGG 0.580103 6_1:+85972985 None:intergenic
TTCATCATAAATGTATGCAA+AGG 0.581572 6_1:+85972414 None:intergenic
CAAAATGGCTGCAACACAGA+TGG 0.582491 6_1:+85973893 None:intergenic
TGATCACTTATTCTAAGTAG+TGG 0.588952 6_1:-85976805 Msa0896220:five_prime_UTR
GGCGAACACAAGAATTCTGA+AGG 0.590261 6_1:-85973044 Msa0896220:CDS
CAGATCATCTGAGAAAATAC+GGG 0.592208 6_1:-85972913 Msa0896220:CDS
ATGGTTCATATATAGATGCA+TGG 0.593809 6_1:+85972469 None:intergenic
AAAGAACAAGGAGACAGGAT+GGG 0.595274 6_1:-85973811 Msa0896220:CDS
AACACAAGAATTCTGAAGGA+AGG 0.596220 6_1:-85973040 Msa0896220:CDS
AAGCAACTCACAACAATCAA+GGG 0.600601 6_1:+85972568 None:intergenic
TAGGTATTGGAAGAAACTTG+TGG 0.605147 6_1:-85972645 Msa0896220:CDS
AGTTACTGGAGCTAATGTGC+AGG 0.605359 6_1:-85975178 Msa0896220:intron
ATGATAAGCTTATCACACTC+AGG 0.609818 6_1:+85976352 None:intergenic
AGAAGCGAAAGTGCATGCTA+TGG 0.612340 6_1:+85976610 None:intergenic
AAGGAATTGAGAAAACAGGA+AGG 0.618569 6_1:-85973021 Msa0896220:CDS
TATTGGAAGAAACTTGTGGA+TGG 0.624449 6_1:-85972641 Msa0896220:CDS
TCTTTGATAACATTAAGTAG+TGG 0.626567 6_1:-85976765 Msa0896220:five_prime_UTR
AAGTACGGTCTTGTTTACCC+TGG 0.636562 6_1:-85973672 Msa0896220:CDS
ATCATCTGAGAAAATACGGG+TGG 0.643184 6_1:-85972910 Msa0896220:CDS
GGTGAAGAGGAAACTGCAGT+AGG 0.652830 6_1:-85975312 Msa0896220:CDS
TTCAGAGAGAAGGCTACAAG+TGG 0.654016 6_1:+85972968 None:intergenic
ACACATCGCCGTTCTCCGTG+TGG 0.662193 6_1:-85972852 Msa0896220:CDS
TGGAACTGTAGGGTCATCAG+AGG 0.671933 6_1:-85975286 Msa0896220:CDS
CAGACTAAGAGAAAATCAGA+AGG 0.687264 6_1:-85975225 Msa0896220:CDS
TGATGTTAGATGGAAAACCA+AGG 0.691803 6_1:-85976411 Msa0896220:CDS
TCCGGCCTACACAATGCCAG+CGG 0.698888 6_1:-85972882 Msa0896220:CDS
AAACAACCCAACCAATACCA+GGG 0.700278 6_1:+85973655 None:intergenic
TAAACAAACCTGAAGCTCAG+TGG 0.702836 6_1:+85976282 None:intergenic
ATTCATGTAGATGCTGCGAG+TGG 0.706666 6_1:-85973780 Msa0896220:CDS
AAAGGAAGTGGAACTCACAG+AGG 0.708224 6_1:-85973967 Msa0896220:CDS
TATCGCGAGTGAGACAAGTG+AGG 0.713496 6_1:-85972708 Msa0896220:CDS
AATCTTCCCTAATCACCACA+CGG 0.728104 6_1:+85972837 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TCAAAATCTAATTTTTTAAT+CGG + chr6_1:85973569-85973588 None:intergenic 10.0%
!! CAATCTATCATAATAAAAAA+AGG + chr6_1:85973629-85973648 None:intergenic 15.0%
!! TGGAATTTACTTAATAATAT+CGG - chr6_1:85976173-85976192 Msa0896220:intron 15.0%
!! TCAAAGAAAAAAGAAAAAAG+AGG + chr6_1:85972555-85972574 None:intergenic 20.0%
!! TAACAAGAATTATGTTGATA+TGG - chr6_1:85973013-85973032 Msa0896220:CDS 20.0%
!!! TTGATCAAGATTTTAAATTG+TGG - chr6_1:85973089-85973108 Msa0896220:intron 20.0%
!!! GCGAAAATATCATTTTTTAA+TGG - chr6_1:85973731-85973750 Msa0896220:intron 20.0%
!!! TAAGTATCAAATTTTGATTG+TGG + chr6_1:85973761-85973780 None:intergenic 20.0%
!!! ATTATTAGATCTTTTCTGTT+TGG - chr6_1:85973787-85973806 Msa0896220:CDS 20.0%
!!! AATATTTAGAAGTGTATGTT+TGG - chr6_1:85974259-85974278 Msa0896220:intron 20.0%
!!! AAATTCTTGATTTTACCTAA+AGG + chr6_1:85974493-85974512 None:intergenic 20.0%
!! GATGAAACAATAAATTTAGT+GGG + chr6_1:85974834-85974853 None:intergenic 20.0%
!! TGATGAAACAATAAATTTAG+TGG + chr6_1:85974835-85974854 None:intergenic 20.0%
!!! AATTTTGATTCTACAATACT+AGG + chr6_1:85974956-85974975 None:intergenic 20.0%
!! GAAAAATTTAATGTGAAAGT+TGG + chr6_1:85975769-85975788 None:intergenic 20.0%
!!! TTCACATTAAATTTTTCCAA+AGG - chr6_1:85975772-85975791 Msa0896220:intron 20.0%
!! TAATTAAATTCTTAAGCATG+TGG - chr6_1:85975817-85975836 Msa0896220:intron 20.0%
!! TTATGAGTATAATTCTTGTT+AGG + chr6_1:85975897-85975916 None:intergenic 20.0%
!! AAATACAAACCAACATTAAA+GGG + chr6_1:85975942-85975961 None:intergenic 20.0%
!!! TTTTTCTGTTTTTAGTCATA+TGG - chr6_1:85976153-85976172 Msa0896220:intron 20.0%
!! TTCATTCATTCATATCAATA+TGG + chr6_1:85976886-85976905 None:intergenic 20.0%
!! TCTTTGATAACATTAAGTAG+TGG - chr6_1:85972568-85972587 Msa0896220:three_prime_UTR 25.0%
!!! ACCTAGTTTTTTTTGTAATG+AGG - chr6_1:85972806-85972825 Msa0896220:CDS 25.0%
! ACCTCATTACAAAAAAAACT+AGG + chr6_1:85972810-85972829 None:intergenic 25.0%
! CTATATCAACACATAAACAT+AGG + chr6_1:85972840-85972859 None:intergenic 25.0%
!! CTATGTTTATGTGTTGATAT+AGG - chr6_1:85972838-85972857 Msa0896220:CDS 25.0%
!! GGATCAAATTTTAAACTAGA+AGG - chr6_1:85973449-85973468 Msa0896220:intron 25.0%
!! ATGAATGAGGGTATAATTTA+GGG - chr6_1:85973527-85973546 Msa0896220:intron 25.0%
!!! CTAATTTTTTAATCGGAAAC+CGG + chr6_1:85973562-85973581 None:intergenic 25.0%
!!! TAGATTTTGAAACAACCTAA+TGG - chr6_1:85973579-85973598 Msa0896220:CDS 25.0%
!!! ATGATAGTTTTAAGGAGTAA+AGG + chr6_1:85973682-85973701 None:intergenic 25.0%
!! TATTTTCGCTTTCTTCAAAA+AGG + chr6_1:85973720-85973739 None:intergenic 25.0%
! CTGTTACAATTGAAATATCT+TGG - chr6_1:85973860-85973879 Msa0896220:CDS 25.0%
!! TGTACATCTAAAATGATTTC+GGG + chr6_1:85974432-85974451 None:intergenic 25.0%
!! GTGTACATCTAAAATGATTT+CGG + chr6_1:85974433-85974452 None:intergenic 25.0%
!! ACACAAAAGCTTAATTTTTC+TGG + chr6_1:85974458-85974477 None:intergenic 25.0%
! TTAAACGACATTAAACATAG+AGG + chr6_1:85975292-85975311 None:intergenic 25.0%
! ACTTCTTACTAAAAAGAACA+AGG - chr6_1:85975510-85975529 Msa0896220:intron 25.0%
!! GTTTTTCACATCAATTATCT+TGG - chr6_1:85975733-85975752 Msa0896220:intron 25.0%
! GAAATACAAACCAACATTAA+AGG + chr6_1:85975943-85975962 None:intergenic 25.0%
! CTCAATACTACCAATTTATA+CGG - chr6_1:85975990-85976009 Msa0896220:intron 25.0%
! TAAGTATGTACTTGATTTCT+AGG - chr6_1:85976071-85976090 Msa0896220:intron 25.0%
!!! TGTTATTTTTCTTGCTCTAA+GGG - chr6_1:85976239-85976258 Msa0896220:intron 25.0%
!!! TCTTTTGAAATGATAGAACT+TGG + chr6_1:85976590-85976609 None:intergenic 25.0%
! TTCATCATAAATGTATGCAA+AGG + chr6_1:85976922-85976941 None:intergenic 25.0%
TGATCACTTATTCTAAGTAG+TGG - chr6_1:85972528-85972547 Msa0896220:three_prime_UTR 30.0%
! AGTTGAAGAAATCACCATTT+TGG + chr6_1:85972675-85972694 None:intergenic 30.0%
GAAGAAAAAGACACTTACTT+AGG + chr6_1:85972770-85972789 None:intergenic 30.0%
!!! CTAGGTGTGATGTTTTTTTA+AGG + chr6_1:85972792-85972811 None:intergenic 30.0%
! TCTTTTGGTATAGAATTCTC+TGG + chr6_1:85972873-85972892 None:intergenic 30.0%
!! AATGATGAGTTGATGTTAGA+TGG - chr6_1:85972912-85972931 Msa0896220:CDS 30.0%
AATAAGACTAAGTGCATGTT+TGG - chr6_1:85973158-85973177 Msa0896220:intron 30.0%
! ATTTTGCAAAAGCTACATCA+GGG + chr6_1:85973219-85973238 None:intergenic 30.0%
ATCCATCAATTTAGTCCTAA+TGG - chr6_1:85973490-85973509 Msa0896220:intron 30.0%
TACCATTAGGACTAAATTGA+TGG + chr6_1:85973495-85973514 None:intergenic 30.0%
TCAATTTGAGCTATACCATT+AGG + chr6_1:85973508-85973527 None:intergenic 30.0%
ATAGCTCAAATTGATGAATG+AGG - chr6_1:85973514-85973533 Msa0896220:intron 30.0%
TAGCTCAAATTGATGAATGA+GGG - chr6_1:85973515-85973534 Msa0896220:intron 30.0%
! GATGAATGAGGGTATAATTT+AGG - chr6_1:85973526-85973545 Msa0896220:intron 30.0%
CTAATGGTATAGCTCAAATT+GGG - chr6_1:85973506-85973525 Msa0896220:intron 30.0%
TAATGGTATAGCTCAAATTG+GGG - chr6_1:85973507-85973526 Msa0896220:intron 30.0%
!! AGCAGAGAATGATAGTTTTA+AGG + chr6_1:85973690-85973709 None:intergenic 30.0%
! ATTAGATCTTTTCTGTTTGG+TGG - chr6_1:85973790-85973809 Msa0896220:CDS 30.0%
!! TCAGTACTTTCAAGTTTCAA+TGG + chr6_1:85973921-85973940 None:intergenic 30.0%
TTTGTTCAATTACGCAGAAT+CGG - chr6_1:85973959-85973978 Msa0896220:CDS 30.0%
!!! TAGCTGGTTTAGCTTTTAAA+AGG - chr6_1:85974079-85974098 Msa0896220:intron 30.0%
!!! GTTTAGCTTTTAAAAGGAAG+TGG - chr6_1:85974085-85974104 Msa0896220:intron 30.0%
ACTATGTTAGGCTTATCATA+TGG + chr6_1:85974138-85974157 None:intergenic 30.0%
TGTATGTTTGGATAAGTAGT+GGG - chr6_1:85974271-85974290 Msa0896220:intron 30.0%
! TTTTGACAAAAGCTACACTT+TGG + chr6_1:85974337-85974356 None:intergenic 30.0%
TAAGAAACTACACATGACTT+TGG + chr6_1:85974539-85974558 None:intergenic 30.0%
ACAATATGCAAAACCACATA+CGG + chr6_1:85974573-85974592 None:intergenic 30.0%
TTGTTATGAAATGCAATAGC+AGG - chr6_1:85974589-85974608 Msa0896220:intron 30.0%
ACACTTCTGATCAAAATTGT+CGG - chr6_1:85974710-85974729 Msa0896220:intron 30.0%
ACAGAATTCATAAGCTATCA+TGG + chr6_1:85975135-85975154 None:intergenic 30.0%
! TAGAGGTATAATGATCTGTT+TGG + chr6_1:85975275-85975294 None:intergenic 30.0%
GTCGTTTAAATATACTACAC+AGG - chr6_1:85975303-85975322 Msa0896220:CDS 30.0%
AATATACTACACAGGTTTGT+TGG - chr6_1:85975311-85975330 Msa0896220:CDS 30.0%
! ATATACTACACAGGTTTGTT+GGG - chr6_1:85975312-85975331 Msa0896220:CDS 30.0%
! ACATTGATACTTTTCACCAA+CGG + chr6_1:85975631-85975650 None:intergenic 30.0%
!! GTGAAAAGTATCAATGTTAG+CGG - chr6_1:85975634-85975653 Msa0896220:intron 30.0%
ATGTGAAAAACAAGATCATC+CGG + chr6_1:85975724-85975743 None:intergenic 30.0%
TCAATCACATGTATTACCTT+TGG + chr6_1:85975791-85975810 None:intergenic 30.0%
! GTTTTTCTTCCCTTTAATGT+TGG - chr6_1:85975930-85975949 Msa0896220:intron 30.0%
CTTAGAGCAAGAAAAATAAC+AGG + chr6_1:85976240-85976259 None:intergenic 30.0%
!!! CTGTTATTTTTCTTGCTCTA+AGG - chr6_1:85976238-85976257 Msa0896220:intron 30.0%
! AAATGTGATGGAAAATTGCT+TGG - chr6_1:85976268-85976287 Msa0896220:intron 30.0%
! AAGGTTTAAAATTGTCTCCA+AGG - chr6_1:85976331-85976350 Msa0896220:CDS 30.0%
AGAAAAAGTTGTGAATCTCT+TGG - chr6_1:85976556-85976575 Msa0896220:intron 30.0%
!! TTCCATTGTTGCTTTATCTA+TGG - chr6_1:85976824-85976843 Msa0896220:five_prime_UTR 30.0%
ATATATAGATGCATGGACAT+TGG + chr6_1:85976860-85976879 None:intergenic 30.0%
ATGGTTCATATATAGATGCA+TGG + chr6_1:85976867-85976886 None:intergenic 30.0%
TGTGAGACATGAAAAATGTG+AGG - chr6_1:85972481-85972500 Msa0896220:three_prime_UTR 35.0%
ACATGAAAAATGTGAGGCAA+TGG - chr6_1:85972487-85972506 Msa0896220:three_prime_UTR 35.0%
ACTGATCTTTGTGAAGATAG+AGG + chr6_1:85972595-85972614 None:intergenic 35.0%
!! GAAGAAATCACCATTTTGGT+TGG + chr6_1:85972671-85972690 None:intergenic 35.0%
! ATCTGATATGCTGCATCTTT+TGG + chr6_1:85972888-85972907 None:intergenic 35.0%
TGATGTTAGATGGAAAACCA+AGG - chr6_1:85972922-85972941 Msa0896220:CDS 35.0%
! TTCTTTTGTGACTACTTGGA+TGG - chr6_1:85972956-85972975 Msa0896220:CDS 35.0%
ATGATAAGCTTATCACACTC+AGG + chr6_1:85972984-85973003 None:intergenic 35.0%
TGAGTGTGATAAGCTTATCA+TGG - chr6_1:85972983-85973002 Msa0896220:CDS 35.0%
! GATTTTGCAAAAGCTACATC+AGG + chr6_1:85973220-85973239 None:intergenic 35.0%
! GATGTAGCTTTTGCAAAATC+AGG - chr6_1:85973220-85973239 Msa0896220:intron 35.0%
!! TTTATGGTGTTGCAGCTTTA+TGG - chr6_1:85973357-85973376 Msa0896220:CDS 35.0%
TCTCTCTCTAATTCTAACGA+TGG - chr6_1:85973406-85973425 Msa0896220:intron 35.0%
CTAATTCTAACGATGGTCTA+CGG - chr6_1:85973413-85973432 Msa0896220:intron 35.0%
! TAATTTAGGGACTAACTTGC+CGG - chr6_1:85973540-85973559 Msa0896220:intron 35.0%
CCAATTTGAGCTATACCATT+AGG + chr6_1:85973597-85973616 None:intergenic 35.0%
CCTAATGGTATAGCTCAAAT+TGG - chr6_1:85973505-85973524 Msa0896220:intron 35.0%
!! TTTTCTGTTTGGTGGTTAGA+TGG - chr6_1:85973798-85973817 Msa0896220:CDS 35.0%
! TTGGTGGTTAGATGGAAATT+TGG - chr6_1:85973806-85973825 Msa0896220:CDS 35.0%
CATCTATTCAATGCTCCTAT+TGG - chr6_1:85974000-85974019 Msa0896220:intron 35.0%
CAGACTAAGAGAAAATCAGA+AGG - chr6_1:85974108-85974127 Msa0896220:intron 35.0%
GATAAGCCTAACATAGTTAC+TGG - chr6_1:85974141-85974160 Msa0896220:intron 35.0%
TTAGCTCCAGTAACTATGTT+AGG + chr6_1:85974150-85974169 None:intergenic 35.0%
GTGTATGTTTGGATAAGTAG+TGG - chr6_1:85974270-85974289 Msa0896220:intron 35.0%
CAGTGAGATTGACAAAATCA+CGG + chr6_1:85974372-85974391 None:intergenic 35.0%
TGTTGTCTAATGTGTCCTTT+AGG - chr6_1:85974475-85974494 Msa0896220:intron 35.0%
!! ATTTTGATCAGAAGTGTGTG+TGG + chr6_1:85974707-85974726 None:intergenic 35.0%
GCACAGACAAATTTGATCAA+AGG + chr6_1:85974774-85974793 None:intergenic 35.0%
CAAATTTGTCTGTGCTTCAT+AGG - chr6_1:85974779-85974798 Msa0896220:intron 35.0%
TTAGTGGGATATGTATGTAG+TGG + chr6_1:85974819-85974838 None:intergenic 35.0%
!! ATGAACAAAGCTTTGAGACA+GGG + chr6_1:85974888-85974907 None:intergenic 35.0%
!! AATGAACAAAGCTTTGAGAC+AGG + chr6_1:85974889-85974908 None:intergenic 35.0%
!! TCAAAGCTTTGTTCATTCTC+AGG - chr6_1:85974892-85974911 Msa0896220:intron 35.0%
!! CAAAGCTTTGTTCATTCTCA+GGG - chr6_1:85974893-85974912 Msa0896220:intron 35.0%
!! AAAGCTTTGTTCATTCTCAG+GGG - chr6_1:85974894-85974913 Msa0896220:intron 35.0%
TTGATTCTACAATACTAGGC+TGG + chr6_1:85974952-85974971 None:intergenic 35.0%
AAACAGTTTCACAAGTGTCT+AGG + chr6_1:85975069-85975088 None:intergenic 35.0%
TAGACACTTGTGAAACTGTT+TGG - chr6_1:85975068-85975087 Msa0896220:intron 35.0%
AGACACTTGTGAAACTGTTT+GGG - chr6_1:85975069-85975088 Msa0896220:intron 35.0%
TTTGTTGGGAAAAATTTGCC+AGG - chr6_1:85975326-85975345 Msa0896220:CDS 35.0%
AAAATTTGCCAGGTACTTTG+AGG - chr6_1:85975336-85975355 Msa0896220:CDS 35.0%
TCCATTGAAAGCTGTTGAAA+TGG - chr6_1:85975405-85975424 Msa0896220:intron 35.0%
ACCATTTCAACAGCTTTCAA+TGG + chr6_1:85975409-85975428 None:intergenic 35.0%
ACTAAAAAGAACAAGGAGAC+AGG - chr6_1:85975517-85975536 Msa0896220:intron 35.0%
!! ATGATTTGACTTGATCCTGT+CGG + chr6_1:85975968-85975987 None:intergenic 35.0%
TACTACCAATTTATACGGCT+TGG - chr6_1:85975995-85976014 Msa0896220:intron 35.0%
TAAGGGCTACAAAAATGTGA+TGG - chr6_1:85976256-85976275 Msa0896220:intron 35.0%
! AACACAAGAATTCTGAAGGA+AGG - chr6_1:85976293-85976312 Msa0896220:CDS 35.0%
AAGGAAGGAATTGAGAAAAC+AGG - chr6_1:85976308-85976327 Msa0896220:CDS 35.0%
AAGGAATTGAGAAAACAGGA+AGG - chr6_1:85976312-85976331 Msa0896220:CDS 35.0%
GCAGATCATCTGAGAAAATA+CGG - chr6_1:85976419-85976438 Msa0896220:CDS 35.0%
CAGATCATCTGAGAAAATAC+GGG - chr6_1:85976420-85976439 Msa0896220:CDS 35.0%
TTCAAAAGATGCTCATGTTG+CGG - chr6_1:85976601-85976620 Msa0896220:CDS 35.0%
ATGCTGAGATTCTTAGGTAT+TGG - chr6_1:85976675-85976694 Msa0896220:exon 35.0%
!! TAGGTATTGGAAGAAACTTG+TGG - chr6_1:85976688-85976707 Msa0896220:five_prime_UTR 35.0%
TATTGGAAGAAACTTGTGGA+TGG - chr6_1:85976692-85976711 Msa0896220:five_prime_UTR 35.0%
AAGCAACTCACAACAATCAA+GGG + chr6_1:85976768-85976787 None:intergenic 35.0%
AAAGCAACTCACAACAATCA+AGG + chr6_1:85976769-85976788 None:intergenic 35.0%
GCATACATTTGATGTGTGTA+AGG - chr6_1:85976797-85976816 Msa0896220:five_prime_UTR 35.0%
CTCCATAGATAAAGCAACAA+TGG + chr6_1:85976829-85976848 None:intergenic 35.0%
CAGAACTCATCCAACCAAAA+TGG - chr6_1:85972658-85972677 Msa0896220:CDS 40.0%
!! ATGGTCTCGTTTTGTTCATC+TGG + chr6_1:85972707-85972726 None:intergenic 40.0%
TGGAAAACCAAGGCTTAACT+TGG - chr6_1:85972932-85972951 Msa0896220:CDS 40.0%
AAAGAAGCCAAGTTAAGCCT+TGG + chr6_1:85972942-85972961 None:intergenic 40.0%
! TGGCTTCTTTTGTGACTACT+TGG - chr6_1:85972952-85972971 Msa0896220:CDS 40.0%
TAAACAAACCTGAAGCTCAG+TGG + chr6_1:85973054-85973073 None:intergenic 40.0%
ACAAAATCACGATACTGTCG+TGG + chr6_1:85974307-85974326 None:intergenic 40.0%
TGCCAATCCAAACATGCTTT+GGG - chr6_1:85974390-85974409 Msa0896220:intron 40.0%
ATTTCCTCCCAAAGCATGTT+TGG + chr6_1:85974400-85974419 None:intergenic 40.0%
! TTTGGAAGCACACATTCGAA+CGG + chr6_1:85974521-85974540 None:intergenic 40.0%
TAGAAAAGTTGCTCCGTATG+TGG - chr6_1:85974557-85974576 Msa0896220:intron 40.0%
AACATCATCCATTTCGTGTC+CGG + chr6_1:85974679-85974698 None:intergenic 40.0%
! AATTTGATCAAAGGCGTGTG+CGG + chr6_1:85974765-85974784 None:intergenic 40.0%
GCTTTATGATTCACATTGCC+TGG - chr6_1:85974924-85974943 Msa0896220:intron 40.0%
! GCGATTGATGTGTCGTATTT+TGG - chr6_1:85974989-85975008 Msa0896220:intron 40.0%
TCAAATAAACCAGTCCAAGC+CGG + chr6_1:85975032-85975051 None:intergenic 40.0%
AAGCTATCATGGAGAGCTTA+TGG + chr6_1:85975124-85975143 None:intergenic 40.0%
!! GTACTTTGAGGTTGAGCTAA+AGG - chr6_1:85975348-85975367 Msa0896220:CDS 40.0%
CACAGAGGATTACTATGTGA+TGG - chr6_1:85975381-85975400 Msa0896220:intron 40.0%
!! ATCTGTGTTGCAGCCATTTT+GGG - chr6_1:85975442-85975461 Msa0896220:intron 40.0%
AAAAGAACAAGGAGACAGGA+TGG - chr6_1:85975521-85975540 Msa0896220:intron 40.0%
AAAGAACAAGGAGACAGGAT+GGG - chr6_1:85975522-85975541 Msa0896220:intron 40.0%
AGAAGATCAGGGTAGAGAAA+TGG + chr6_1:85975592-85975611 None:intergenic 40.0%
TTCTCTACCCTGATCTTCTA+TGG - chr6_1:85975593-85975612 Msa0896220:intron 40.0%
TCTCTACCCTGATCTTCTAT+GGG - chr6_1:85975594-85975613 Msa0896220:intron 40.0%
GGAAATCCCATAGAAGATCA+GGG + chr6_1:85975603-85975622 None:intergenic 40.0%
! TACTTTTCACCAACGGCAAA+CGG + chr6_1:85975624-85975643 None:intergenic 40.0%
AATGTTAGCGGTCACAAGTA+CGG - chr6_1:85975646-85975665 Msa0896220:intron 40.0%
!! TTGTTTACCCTGGTATTGGT+TGG - chr6_1:85975671-85975690 Msa0896220:intron 40.0%
!! TGTTTACCCTGGTATTGGTT+GGG - chr6_1:85975672-85975691 Msa0896220:intron 40.0%
AAACAACCCAACCAATACCA+GGG + chr6_1:85975681-85975700 None:intergenic 40.0%
! TGGTTTGTATTTCTTCCGAC+AGG - chr6_1:85975950-85975969 Msa0896220:intron 40.0%
CGAAACCAAGCCGTATAAAT+TGG + chr6_1:85976003-85976022 None:intergenic 40.0%
!! ATTTATACGGCTTGGTTTCG+AGG - chr6_1:85976003-85976022 Msa0896220:intron 40.0%
ATCATCTGAGAAAATACGGG+TGG - chr6_1:85976423-85976442 Msa0896220:CDS 40.0%
AAAATACGGGTGGATAGTTC+CGG - chr6_1:85976433-85976452 Msa0896220:CDS 40.0%
AATCTTCCCTAATCACCACA+CGG + chr6_1:85976499-85976518 None:intergenic 40.0%
AGACTCATGCTGAGATTCTT+AGG - chr6_1:85976669-85976688 Msa0896220:exon 40.0%
! AGAAGCGAAAGTGCATGCTA+TGG + chr6_1:85972726-85972745 None:intergenic 45.0%
TTCTAGATACGTGCGTGAAC+AGG - chr6_1:85972742-85972761 Msa0896220:CDS 45.0%
ATTGTGGTTGTGATCGCAGA+TGG - chr6_1:85973105-85973124 Msa0896220:intron 45.0%
TTGTGGTTGTGATCGCAGAT+GGG - chr6_1:85973106-85973125 Msa0896220:intron 45.0%
GTCTACGGCTGCAACTATAA+AGG - chr6_1:85973428-85973447 Msa0896220:intron 45.0%
CAATGCTCCTATTGGTGAAG+AGG - chr6_1:85974008-85974027 Msa0896220:intron 45.0%
GCAGTTTCCTCTTCACCAAT+AGG + chr6_1:85974018-85974037 None:intergenic 45.0%
!! CAGTAGGTGTTGGAACTGTA+GGG - chr6_1:85974037-85974056 Msa0896220:intron 45.0%
TCAGAGGCAATAATGCTAGC+TGG - chr6_1:85974063-85974082 Msa0896220:intron 45.0%
AGTTACTGGAGCTAATGTGC+AGG - chr6_1:85974155-85974174 Msa0896220:intron 45.0%
CTGCCAATCCAAACATGCTT+TGG - chr6_1:85974389-85974408 Msa0896220:intron 45.0%
CTCCCAAAGCATGTTTGGAT+TGG + chr6_1:85974395-85974414 None:intergenic 45.0%
! CAATCCAAACATGCTTTGGG+AGG - chr6_1:85974393-85974412 Msa0896220:intron 45.0%
CAATAGCAGGTCTGAACCAA+AGG - chr6_1:85974602-85974621 Msa0896220:intron 45.0%
GTCCATACTTCATAAGCCGA+AGG + chr6_1:85974655-85974674 None:intergenic 45.0%
GGCTTATGAAGTATGGACAC+CGG - chr6_1:85974657-85974676 Msa0896220:intron 45.0%
GGACACGAAATGGATGATGT+TGG - chr6_1:85974678-85974697 Msa0896220:intron 45.0%
!! ATGTAGTGGATGAGTGTAGC+AGG + chr6_1:85974805-85974824 None:intergenic 45.0%
CAAATAAACCAGTCCAAGCC+GGG + chr6_1:85975031-85975050 None:intergenic 45.0%
! TAGCTCAACCTCAAAGTACC+TGG + chr6_1:85975347-85975366 None:intergenic 45.0%
TGAGGTTGAGCTAAAGGAAG+TGG - chr6_1:85975354-85975373 Msa0896220:CDS 45.0%
AAAGGAAGTGGAACTCACAG+AGG - chr6_1:85975366-85975385 Msa0896220:intron 45.0%
CAAAATGGCTGCAACACAGA+TGG + chr6_1:85975443-85975462 None:intergenic 45.0%
! CATCTGTGTTGCAGCCATTT+TGG - chr6_1:85975441-85975460 Msa0896220:intron 45.0%
!!! ATTTTGGGTTCAACGCTGAC+CGG - chr6_1:85975457-85975476 Msa0896220:intron 45.0%
CTTCACATCCTCAAACTCTC+CGG + chr6_1:85975479-85975498 None:intergenic 45.0%
CTCGCAGCATCTACATGAAT+CGG + chr6_1:85975553-85975572 None:intergenic 45.0%
ATTCATGTAGATGCTGCGAG+TGG - chr6_1:85975553-85975572 Msa0896220:intron 45.0%
CGGAAATCCCATAGAAGATC+AGG + chr6_1:85975604-85975623 None:intergenic 45.0%
!! AAGTACGGTCTTGTTTACCC+TGG - chr6_1:85975661-85975680 Msa0896220:intron 45.0%
!! GGTCTTGTTTACCCTGGTAT+TGG - chr6_1:85975667-85975686 Msa0896220:intron 45.0%
CAAACAACCCAACCAATACC+AGG + chr6_1:85975682-85975701 None:intergenic 45.0%
!! CTGGTATTGGTTGGGTTGTT+TGG - chr6_1:85975680-85975699 Msa0896220:intron 45.0%
!! GTATTGGTTGGGTTGTTTGG+AGG - chr6_1:85975683-85975702 Msa0896220:intron 45.0%
! GAGGCATAAAGCTGACTTAC+CGG - chr6_1:85975702-85975721 Msa0896220:intron 45.0%
GGCGAACACAAGAATTCTGA+AGG - chr6_1:85976289-85976308 Msa0896220:intron 45.0%
AAGTGGCACACATATGTCCT+TGG + chr6_1:85976351-85976370 None:intergenic 45.0%
TTCAGAGAGAAGGCTACAAG+TGG + chr6_1:85976368-85976387 None:intergenic 45.0%
!!! TTAAATTATAAGTTATTTTA+TGG - chr6_1:85973341-85973360 Msa0896220:CDS 5.0%
GGTGAAGAGGAAACTGCAGT+AGG - chr6_1:85974021-85974040 Msa0896220:intron 50.0%
GAGGAAACTGCAGTAGGTGT+TGG - chr6_1:85974027-85974046 Msa0896220:intron 50.0%
!! GCAGTAGGTGTTGGAACTGT+AGG - chr6_1:85974036-85974055 Msa0896220:intron 50.0%
TGGAACTGTAGGGTCATCAG+AGG - chr6_1:85974047-85974066 Msa0896220:intron 50.0%
GCAGGTCTGAACCAAAGGTA+AGG - chr6_1:85974607-85974626 Msa0896220:intron 50.0%
!! GGCTTGTCTAGCCTTACCTT+TGG + chr6_1:85974621-85974640 None:intergenic 50.0%
GCTAGACAAGCCCTTGCTTT+AGG - chr6_1:85974629-85974648 Msa0896220:intron 50.0%
! AAGCCCTTGCTTTAGGCCTT+CGG - chr6_1:85974636-85974655 Msa0896220:intron 50.0%
AAGCCGAAGGCCTAAAGCAA+GGG + chr6_1:85974642-85974661 None:intergenic 50.0%
TAAGCCGAAGGCCTAAAGCA+AGG + chr6_1:85974643-85974662 None:intergenic 50.0%
GGCCTTCGGCTTATGAAGTA+TGG - chr6_1:85974650-85974669 Msa0896220:intron 50.0%
TATGGACACCGGACACGAAA+TGG - chr6_1:85974668-85974687 Msa0896220:intron 50.0%
! TACAATACTAGGCTGGCTCC+AGG + chr6_1:85974945-85974964 None:intergenic 50.0%
! GGTCAGCGTTGAACCCAAAA+TGG + chr6_1:85975458-85975477 None:intergenic 50.0%
ATGGGATTTCCGTTTGCCGT+TGG - chr6_1:85975612-85975631 Msa0896220:intron 50.0%
GCTGCTGTCTTTCAGAGAGA+AGG + chr6_1:85976378-85976397 None:intergenic 50.0%
CCTAATCACCACACGGAGAA+CGG + chr6_1:85976492-85976511 None:intergenic 50.0%
CGTTCTCCGTGTGGTGATTA+GGG - chr6_1:85976490-85976509 Msa0896220:intron 50.0%
GGAAGATTTCAGCTGCAGCT+TGG - chr6_1:85976511-85976530 Msa0896220:intron 50.0%
TATCGCGAGTGAGACAAGTG+AGG - chr6_1:85976625-85976644 Msa0896220:CDS 50.0%
CTTGTGGATGGCAAGAGAGT+TGG - chr6_1:85976704-85976723 Msa0896220:five_prime_UTR 50.0%
CAAGAGAGTTGGAGCATGCT+AGG - chr6_1:85976715-85976734 Msa0896220:five_prime_UTR 50.0%
TCCTGTCACCACTGAGCTTC+AGG - chr6_1:85973043-85973062 Msa0896220:CDS 55.0%
ACCTGAAGCTCAGTGGTGAC+AGG + chr6_1:85973047-85973066 None:intergenic 55.0%
! GGTGCCTTTTCCCATAAGCC+CGG - chr6_1:85975010-85975029 Msa0896220:intron 55.0%
CAAGCCGGGCTTATGGGAAA+AGG + chr6_1:85975017-85975036 None:intergenic 55.0%
! CTTTTCCCATAAGCCCGGCT+TGG - chr6_1:85975015-85975034 Msa0896220:intron 55.0%
AACGCTGACCGGAGAGTTTG+AGG - chr6_1:85975468-85975487 Msa0896220:intron 55.0%
CATGTAGATGCTGCGAGTGG+CGG - chr6_1:85975556-85975575 Msa0896220:intron 55.0%
ATGTAGATGCTGCGAGTGGC+GGG - chr6_1:85975557-85975576 Msa0896220:intron 55.0%
CCGTTCTCCGTGTGGTGATT+AGG - chr6_1:85976489-85976508 Msa0896220:intron 55.0%
CCAGTCCAAGCCGGGCTTAT+GGG + chr6_1:85975023-85975042 None:intergenic 60.0%
ACCAGTCCAAGCCGGGCTTA+TGG + chr6_1:85975024-85975043 None:intergenic 60.0%
TCCGGCCTACACAATGCCAG+CGG - chr6_1:85976451-85976470 Msa0896220:CDS 60.0%
TCCGCTGGCATTGTGTAGGC+CGG + chr6_1:85976455-85976474 None:intergenic 60.0%
TGCGTCCGCTGGCATTGTGT+AGG + chr6_1:85976459-85976478 None:intergenic 60.0%
! GCGATGTGTTTTGCGTCCGC+TGG + chr6_1:85976470-85976489 None:intergenic 60.0%
ACACATCGCCGTTCTCCGTG+TGG - chr6_1:85976481-85976500 Msa0896220:intron 60.0%
!! CCCATAAGCCCGGCTTGGAC+TGG - chr6_1:85975020-85975039 Msa0896220:intron 65.0%
Chromosome Type Strat End Strand Name
chr6_1 gene 85972392 85976963 85972392 ID=Msa0896220;Name=Msa0896220
chr6_1 mRNA 85972392 85976963 85972392 ID=Msa0896220-mRNA-1;Parent=Msa0896220;Name=Msa0896220-mRNA-1;_AED=0.29;_eAED=0.29;_QI=285|0.66|0.71|1|0.66|0.71|7|227|467
chr6_1 exon 85972392 85973095 85972392 ID=Msa0896220-mRNA-1:exon:14503;Parent=Msa0896220-mRNA-1
chr6_1 exon 85973331 85973383 85973331 ID=Msa0896220-mRNA-1:exon:14502;Parent=Msa0896220-mRNA-1
chr6_1 exon 85973562 85973713 85973562 ID=Msa0896220-mRNA-1:exon:14501;Parent=Msa0896220-mRNA-1
chr6_1 exon 85973777 85973997 85973777 ID=Msa0896220-mRNA-1:exon:14500;Parent=Msa0896220-mRNA-1
chr6_1 exon 85975179 85975379 85975179 ID=Msa0896220-mRNA-1:exon:14499;Parent=Msa0896220-mRNA-1
chr6_1 exon 85976291 85976495 85976291 ID=Msa0896220-mRNA-1:exon:14498;Parent=Msa0896220-mRNA-1
chr6_1 exon 85976584 85976963 85976584 ID=Msa0896220-mRNA-1:exon:14497;Parent=Msa0896220-mRNA-1
chr6_1 five_prime_UTR 85976679 85976963 85976679 ID=Msa0896220-mRNA-1:five_prime_utr;Parent=Msa0896220-mRNA-1
chr6_1 CDS 85976584 85976678 85976584 ID=Msa0896220-mRNA-1:cds;Parent=Msa0896220-mRNA-1
chr6_1 CDS 85976291 85976495 85976291 ID=Msa0896220-mRNA-1:cds;Parent=Msa0896220-mRNA-1
chr6_1 CDS 85975179 85975379 85975179 ID=Msa0896220-mRNA-1:cds;Parent=Msa0896220-mRNA-1
chr6_1 CDS 85973777 85973997 85973777 ID=Msa0896220-mRNA-1:cds;Parent=Msa0896220-mRNA-1
chr6_1 CDS 85973562 85973713 85973562 ID=Msa0896220-mRNA-1:cds;Parent=Msa0896220-mRNA-1
chr6_1 CDS 85973331 85973383 85973331 ID=Msa0896220-mRNA-1:cds;Parent=Msa0896220-mRNA-1
chr6_1 CDS 85972619 85973095 85972619 ID=Msa0896220-mRNA-1:cds;Parent=Msa0896220-mRNA-1
chr6_1 three_prime_UTR 85972392 85972618 85972392 ID=Msa0896220-mRNA-1:three_prime_utr;Parent=Msa0896220-mRNA-1
Gene Sequence

>Msa0896220

ATGGTGATTTCTTCAACTGTCACACATCCAGATGAACAAAACGAGACCATAGCATGCACTTTCGCTTCTAGATACGTGCGTGAACAGGTTCCTAAGTTCAAGATGCCAGAGAATTCTATACCAAAAGATGCAGCATATCAGATAATAAATGATGAGTTGATGTTAGATGGAAAACCAAGGCTTAACTTGGCTTCTTTTGTGACTACTTGGATGGAACCTGAGTGTGATAAGCTTATCATGGATTCACTTAACAAGAATTATGTTGATATGGATGAATATCCTGTCACCACTGAGCTTCAGAATCGGTGTGTGAATATAATAGCACATCTATTCAATGCTCCTATTGGTGAAGAGGAAACTGCAGTAGGTGTTGGAACTGTAGGGTCATCAGAGGCAATAATGCTAGCTGGTTTAGCTTTTAAAAGGAAGTGGCAGACTAAGAGAAAATCAGAAGGCAAACCATATGATAAGCCTAACATAGTTACTGGAGCTAATGTGCAGGTTGAGCTAAAGGAAGTGGAACTCACAGAGGATTACTATGTGATGGATCCATTGAAAGCTGTTGAAATGGTAGATGAGAACACCATCTGTGTTGCAGCCATTTTGGGTTCAACGCTGACCGGAGAGTTTGAGGATGTGAAGCTTCTCAACGAACTTCTTACTAAAAAGAACAAGGAGACAGGATGGGATACACCGATTCATGTAGATGCTGCGAGTGGCGGTATCAATGTTAGCGGTCACAAGTACGGTCTTGTTTACCCTGGTATTGGTTGGGTTGTTTGGAGGCATAAAGCTGACTTACCGGATGATCTTGTTTTTCACATCAATTATCTTGGATCTGATCAGCCAACTTTCACATTAAATTTTTCCAAAGGATCAAGTCAAATCATTGCTCAATACTACCAATTTATACGGCTTGGTTTCGAGGGCTACAAAAATGTGATGGAAAATTGCTTGGCGAACACAAGAATTCTGAAGGAAGGAATTGAGAAAACAGGAAGGTTTAAAATTGTCTCCAAGGACATATGTGTGCCACTTGTAGCCTTCTCTCTGAAAGACAGCAGCAAGCACACTGTTTTTGAAATAGCAGATCATCTGAGAAAATACGGGTGGATAGTTCCGGCCTACACAATGCCAGCGGACGCAAAACACATCGCCGTTCTCCGTGTGGTGATTAGGGAAGATTTCAGCTGCAGCTTGGCTGAAAGACTTGTTTCTGACATAGAAAAAGTTGTGAATCTCTTGGACACACTTCCAAGTTCTATCATTTCAAAAGATGCTCATGTTGCGGTTATCGCGAGTGAGACAAGTGAGGAAGTTAATAAAGATATTACTGAGACTCATGCTGAGATTCTTAGGTATTGGAAGAAACTTGTGGATGGCAAGAGAGTTGGAGCATGCTAG

Protein sequence

>Msa0896220

MVISSTVTHPDEQNETIACTFASRYVREQVPKFKMPENSIPKDAAYQIINDELMLDGKPRLNLASFVTTWMEPECDKLIMDSLNKNYVDMDEYPVTTELQNRCVNIIAHLFNAPIGEEETAVGVGTVGSSEAIMLAGLAFKRKWQTKRKSEGKPYDKPNIVTGANVQVELKEVELTEDYYVMDPLKAVEMVDENTICVAAILGSTLTGEFEDVKLLNELLTKKNKETGWDTPIHVDAASGGINVSGHKYGLVYPGIGWVVWRHKADLPDDLVFHINYLGSDQPTFTLNFSKGSSQIIAQYYQFIRLGFEGYKNVMENCLANTRILKEGIEKTGRFKIVSKDICVPLVAFSLKDSSKHTVFEIADHLRKYGWIVPAYTMPADAKHIAVLRVVIREDFSCSLAERLVSDIEKVVNLLDTLPSSIISKDAHVAVIASETSEEVNKDITETHAEILRYWKKLVDGKRVGAC*