Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0825130 | sp|Q55C80|DPH7_DICDI | 34.232 | 371 | 194 | 12 | 25 | 358 | 10 | 367 | 2.22e-54 | 186 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0825130 | G7KEH9 | 95.751 | 353 | 15 | 0 | 10 | 362 | 65 | 417 | 0.0 | 712 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0027230 | Msa0825130 | 0.803684 | 3.099425e-49 | -8.615850e-47 |
| Msa0027260 | Msa0825130 | 0.809675 | 1.682550e-50 | -8.615850e-47 |
| Msa0032580 | Msa0825130 | 0.801149 | 1.031665e-48 | -8.615850e-47 |
| Msa0070700 | Msa0825130 | 0.811856 | 5.678006e-51 | -8.615850e-47 |
| Msa0608500 | Msa0825130 | 0.812418 | 4.282041e-51 | -8.615850e-47 |
| Msa0689260 | Msa0825130 | 0.822646 | 2.119425e-53 | -8.615850e-47 |
| Msa0715700 | Msa0825130 | 0.803112 | 4.072477e-49 | -8.615850e-47 |
| Msa0825130 | Msa0831530 | 0.806774 | 6.985387e-50 | -8.615850e-47 |
| Msa0825130 | Msa0892120 | 0.801937 | 7.114095e-49 | -8.615850e-47 |
| Msa0825130 | Msa1106700 | 0.831236 | 1.871413e-55 | -8.615850e-47 |
| Msa0825130 | Msa1137700 | 0.802121 | 6.518811e-49 | -8.615850e-47 |
| Msa0825130 | Msa1358250 | 0.818759 | 1.657442e-52 | -8.615850e-47 |
| Msa0825130 | Msa1370070 | -0.802169 | 6.374544e-49 | -8.615850e-47 |
| Msa0825130 | Msa1392780 | 0.824695 | 7.022361e-54 | -8.615850e-47 |
| Msa0825130 | Msa1400580 | 0.800642 | 1.309601e-48 | -8.615850e-47 |
| Msa0144370 | Msa0825130 | 0.810236 | 1.274134e-50 | -8.615850e-47 |
| Msa0159170 | Msa0825130 | 0.804708 | 1.897666e-49 | -8.615850e-47 |
| Msa0165660 | Msa0825130 | 0.807079 | 6.021365e-50 | -8.615850e-47 |
| Msa0187120 | Msa0825130 | 0.811262 | 7.642872e-51 | -8.615850e-47 |
| Msa0220720 | Msa0825130 | 0.816181 | 6.311982e-52 | -8.615850e-47 |
| Msa0395820 | Msa0825130 | 0.800733 | 1.255077e-48 | -8.615850e-47 |
| Msa0402790 | Msa0825130 | 0.801459 | 8.917206e-49 | -8.615850e-47 |
| Msa0264150 | Msa0825130 | 0.804616 | 1.982801e-49 | -8.615850e-47 |
| Msa0299870 | Msa0825130 | 0.828343 | 9.475673e-55 | -8.615850e-47 |
| Msa0337240 | Msa0825130 | 0.813518 | 2.457632e-51 | -8.615850e-47 |
| Msa0357900 | Msa0825130 | 0.806996 | 6.270935e-50 | -8.615850e-47 |
| Msa0493410 | Msa0825130 | 0.826387 | 2.789914e-54 | -8.615850e-47 |
| Msa0554920 | Msa0825130 | 0.808159 | 3.551293e-50 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0825130 | MtrunA17_Chr5g0446711 | 96.512 | 344 | 12 | 0 | 19 | 362 | 1 | 344 | 0.0 | 694 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0825130 | AT5G63010.1 | 60.116 | 346 | 128 | 4 | 19 | 362 | 1 | 338 | 9.95e-153 | 434 |
Find 91 sgRNAs with CRISPR-Local
Find 346 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CTTCCAGTTAATAAGGTATT+TGG | 0.087837 | 5_3:-64872075 | None:intergenic |
| TTTGCAATTGTTGCTATTAA+AGG | 0.230758 | 5_3:+64872246 | Msa0825130:CDS |
| TGATATCCATCAGCCAAATT+TGG | 0.233877 | 5_3:+64871924 | Msa0825130:CDS |
| GAACTCTAAGGTCCACAAAA+TGG | 0.247499 | 5_3:+64872020 | Msa0825130:CDS |
| ATCATAGCTTCCAGTTAATA+AGG | 0.268520 | 5_3:-64872082 | None:intergenic |
| TAACTCTATGTGCTTGTATC+TGG | 0.275517 | 5_3:+64871765 | Msa0825130:CDS |
| CTAATTGAAGTCTCATTAAC+AGG | 0.277252 | 5_3:-64872144 | None:intergenic |
| GACCCAAATACCTTATTAAC+TGG | 0.308590 | 5_3:+64872072 | Msa0825130:CDS |
| CTTCATCCAAGGCCTTGTTT+TGG | 0.318096 | 5_3:+64872203 | Msa0825130:CDS |
| GAGCCAGTATATACCAAATT+TGG | 0.327127 | 5_3:-64871937 | None:intergenic |
| TTAGCTTAGGTGGAGGAGTT+TGG | 0.334473 | 5_3:+64872163 | Msa0825130:CDS |
| TTCTCTTCATGAATCCAATC+TGG | 0.334547 | 5_3:+64871849 | Msa0825130:CDS |
| CTCTTCTTGTATTTCCAGAT+TGG | 0.335556 | 5_3:-64871863 | None:intergenic |
| CCTGCTTGTGGATTCATAAC+AGG | 0.345397 | 5_3:+64870258 | Msa0825130:CDS |
| TTCCAGTTAATAAGGTATTT+GGG | 0.361076 | 5_3:-64872074 | None:intergenic |
| CAGCCAAATTTGGTATATAC+TGG | 0.372578 | 5_3:+64871934 | Msa0825130:CDS |
| CTTTCTATGACAAACTTGTC+AGG | 0.398507 | 5_3:+64872391 | Msa0825130:CDS |
| GTAGCACATTGCTATTTAGA+AGG | 0.402998 | 5_3:+64870303 | Msa0825130:CDS |
| TGAAATGCTTCCAGATCTAC+TGG | 0.403251 | 5_3:-64870415 | None:intergenic |
| TCTTGTATTTAAGAACTCTA+AGG | 0.412316 | 5_3:+64872008 | Msa0825130:CDS |
| AGAGTTCTTAAATACAAGAT+TGG | 0.418020 | 5_3:-64872004 | None:intergenic |
| TTGGCTGCTTGCATGCATAA+TGG | 0.422100 | 5_3:+64872222 | Msa0825130:CDS |
| CAAAACAAGGCCTTGGATGA+AGG | 0.427193 | 5_3:-64872202 | None:intergenic |
| AATGAGACTTCAATTAGCTT+AGG | 0.435668 | 5_3:+64872150 | Msa0825130:CDS |
| ATGCTGGATGGTTGCTCTGA+TGG | 0.442200 | 5_3:+64870588 | Msa0825130:CDS |
| GGTGACCAACCCAGTAGATC+TGG | 0.445031 | 5_3:+64870405 | Msa0825130:CDS |
| AACTCTAAGGTCCACAAAAT+GGG | 0.447471 | 5_3:+64872021 | Msa0825130:CDS |
| CTATGTGCTTGTATCTGGAT+TGG | 0.464602 | 5_3:+64871770 | Msa0825130:CDS |
| TTGTTCTTAATTCCTGCTTG+TGG | 0.469616 | 5_3:+64870246 | Msa0825130:CDS |
| ATGACAAACTTGTCAGGGTA+TGG | 0.475765 | 5_3:+64872397 | Msa0825130:CDS |
| GCTTAGGTGGAGGAGTTTGG+AGG | 0.486854 | 5_3:+64872166 | Msa0825130:CDS |
| ACCTTCTTGTAGTGTGTAAG+TGG | 0.489791 | 5_3:-64870385 | None:intergenic |
| AAGCACGATTCCCTTGCATA+TGG | 0.490141 | 5_3:+64872300 | Msa0825130:CDS |
| CTTAGGTGGAGGAGTTTGGA+GGG | 0.500724 | 5_3:+64872167 | Msa0825130:CDS |
| AAGCAGCCAAAACAAGGCCT+TGG | 0.510827 | 5_3:-64872209 | None:intergenic |
| TTCACTCTTTAATATTGAAG+CGG | 0.521384 | 5_3:+64870434 | Msa0825130:CDS |
| TATATACCAAATTTGGCTGA+TGG | 0.522943 | 5_3:-64871930 | None:intergenic |
| AAAACAAGGCCTTGGATGAA+GGG | 0.528136 | 5_3:-64872201 | None:intergenic |
| AGGCGACAAAGCTGAAGTGT+TGG | 0.538419 | 5_3:+64872266 | Msa0825130:CDS |
| AAAGAGCAAGTAGCAACTAC+TGG | 0.540443 | 5_3:-64872372 | None:intergenic |
| GCCAGTCTGCTCCATATGCA+AGG | 0.541177 | 5_3:-64872311 | None:intergenic |
| ATAAAGTGGAATCCACCTGC+AGG | 0.543383 | 5_3:+64870510 | Msa0825130:CDS |
| GAGACTTCAATTAGCTTAGG+TGG | 0.547687 | 5_3:+64872153 | Msa0825130:CDS |
| TTTAATATTGAAGCGGACAC+AGG | 0.552003 | 5_3:+64870441 | Msa0825130:CDS |
| TCATCCACATCCATCACAGT+AGG | 0.553375 | 5_3:+64871799 | Msa0825130:CDS |
| AAAGGACTTATGTTCCCTGC+AGG | 0.554338 | 5_3:-64870525 | None:intergenic |
| GGACTTATGTTCCCTGCAGG+TGG | 0.557853 | 5_3:-64870522 | None:intergenic |
| TTCTTAAATACAAGATTGGA+AGG | 0.558501 | 5_3:-64872000 | None:intergenic |
| TTAGGTCAAGCAGATGCTGA+TGG | 0.559666 | 5_3:+64870549 | Msa0825130:CDS |
| GGTTGCTCTGATGGAATACA+AGG | 0.562141 | 5_3:+64870597 | Msa0825130:CDS |
| ATGATGAATACTTGAGGGTG+TGG | 0.565089 | 5_3:+64872100 | Msa0825130:CDS |
| ATCAGAAAGCCCTACTGTGA+TGG | 0.567016 | 5_3:-64871809 | None:intergenic |
| TACAAGATAATATCATTACA+TGG | 0.572100 | 5_3:-64872423 | None:intergenic |
| ATACTTGAGAATTAAGATGC+TGG | 0.572344 | 5_3:+64870572 | Msa0825130:CDS |
| TATGGAGCAGACTGGCAGAA+AGG | 0.573876 | 5_3:+64872318 | Msa0825130:CDS |
| ACATTGTGGTGCCCATTATG+TGG | 0.577351 | 5_3:-64870351 | None:intergenic |
| ATCTGGAAATACAAGAAGAG+TGG | 0.579291 | 5_3:+64871866 | Msa0825130:CDS |
| TTTCTATGACAAACTTGTCA+GGG | 0.580064 | 5_3:+64872392 | Msa0825130:CDS |
| TGCTTCCAGATCTACTGGGT+TGG | 0.580660 | 5_3:-64870410 | None:intergenic |
| GCATGCAAGCAGCCAAAACA+AGG | 0.587727 | 5_3:-64872215 | None:intergenic |
| AGGCAACTATTTAGTCAGCA+TGG | 0.587938 | 5_3:+64870278 | Msa0825130:CDS |
| TTTATAGTGAGGAGACTAGT+GGG | 0.588794 | 5_3:+64870478 | Msa0825130:CDS |
| CCTGTTATGAATCCACAAGC+AGG | 0.591987 | 5_3:-64870258 | None:intergenic |
| AATAAGGTATTTGGGTCATG+AGG | 0.593807 | 5_3:-64872066 | None:intergenic |
| ACTTCAATTAGCTTAGGTGG+AGG | 0.594290 | 5_3:+64872156 | Msa0825130:CDS |
| AAGCTATGATGAATACTTGA+GGG | 0.595787 | 5_3:+64872095 | Msa0825130:CDS |
| AAGCCCTACTGTGATGGATG+TGG | 0.596404 | 5_3:-64871803 | None:intergenic |
| TGGCTGATGGATATCAAATG+AGG | 0.602475 | 5_3:-64871917 | None:intergenic |
| AAGCATCATCCCTTCATCCA+AGG | 0.604040 | 5_3:+64872192 | Msa0825130:CDS |
| GGAAATACAAGAAGAGTGGA+AGG | 0.610010 | 5_3:+64871870 | Msa0825130:CDS |
| TCCACTTACACACTACAAGA+AGG | 0.610467 | 5_3:+64870384 | Msa0825130:CDS |
| GAGAAGTAAATCACATGGGA+GGG | 0.611106 | 5_3:+64872340 | Msa0825130:CDS |
| GAAGCTATGATGAATACTTG+AGG | 0.614708 | 5_3:+64872094 | Msa0825130:CDS |
| CCAGTCTGCTCCATATGCAA+GGG | 0.615600 | 5_3:-64872310 | None:intergenic |
| CATCCACATCCATCACAGTA+GGG | 0.616744 | 5_3:+64871800 | Msa0825130:CDS |
| AGAAGGTAATGCAGATGCTG+TGG | 0.618373 | 5_3:+64870320 | Msa0825130:CDS |
| ACTGTGATGGATGTGGATGA+AGG | 0.619011 | 5_3:-64871796 | None:intergenic |
| CCCTTGCATATGGAGCAGAC+TGG | 0.623412 | 5_3:+64872310 | Msa0825130:CDS |
| GGAGAAGTAAATCACATGGG+AGG | 0.623635 | 5_3:+64872339 | Msa0825130:CDS |
| ACAAACTTGTCAGGGTATGG+AGG | 0.625101 | 5_3:+64872400 | Msa0825130:CDS |
| ATCACAGTAGGGCTTTCTGA+TGG | 0.627183 | 5_3:+64871811 | Msa0825130:CDS |
| ACAACAAAACTTGCAATCGT+CGG | 0.634703 | 5_3:-64871959 | None:intergenic |
| GTTTATAGTGAGGAGACTAG+TGG | 0.636171 | 5_3:+64870477 | Msa0825130:CDS |
| TTGAGAATTAAGATGCTGGA+TGG | 0.643048 | 5_3:+64870576 | Msa0825130:CDS |
| TGATGAATACTTGAGGGTGT+GGG | 0.648470 | 5_3:+64872101 | Msa0825130:CDS |
| TGGATACAGCTAAAACATTG+TGG | 0.659617 | 5_3:-64870365 | None:intergenic |
| TAAAGTGGAATCCACCTGCA+GGG | 0.661286 | 5_3:+64870511 | Msa0825130:CDS |
| GCTTGACACAGTTTATAGTG+AGG | 0.668101 | 5_3:+64870467 | Msa0825130:CDS |
| GAAAGGAGAAGTAAATCACA+TGG | 0.686537 | 5_3:+64872335 | Msa0825130:CDS |
| GAAATGCTTCCAGATCTACT+GGG | 0.705745 | 5_3:-64870414 | None:intergenic |
| AAAGGAGAAGTAAATCACAT+GGG | 0.735171 | 5_3:+64872336 | Msa0825130:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TTGATACAATTAAAAATAAT+AGG | - | chr5_3:64871428-64871447 | None:intergenic | 10.0% |
| !! | TTGATACAATTAAAAATAAT+AGG | - | chr5_3:64871428-64871447 | None:intergenic | 10.0% |
| !! | AAGTCTAGAAATAAATTATA+CGG | + | chr5_3:64870699-64870718 | Msa0825130:intron | 15.0% |
| !! | AATAAAAAACAAACTAGAAA+TGG | - | chr5_3:64871227-64871246 | None:intergenic | 15.0% |
| !!! | TTCTAGTTTGTTTTTTATTT+TGG | + | chr5_3:64871228-64871247 | Msa0825130:intron | 15.0% |
| !!! | TTTTAATTGTATCAAAGATT+TGG | + | chr5_3:64871433-64871452 | Msa0825130:intron | 15.0% |
| !! | AAGTCTAGAAATAAATTATA+CGG | + | chr5_3:64870699-64870718 | Msa0825130:intron | 15.0% |
| !! | AATAAAAAACAAACTAGAAA+TGG | - | chr5_3:64871227-64871246 | None:intergenic | 15.0% |
| !!! | TTCTAGTTTGTTTTTTATTT+TGG | + | chr5_3:64871228-64871247 | Msa0825130:intron | 15.0% |
| !!! | TTTTAATTGTATCAAAGATT+TGG | + | chr5_3:64871433-64871452 | Msa0825130:intron | 15.0% |
| !! | TTTAGAAATGAAAGAATCAA+GGG | - | chr5_3:64870636-64870655 | None:intergenic | 20.0% |
| !!! | TTTTAGAAATGAAAGAATCA+AGG | - | chr5_3:64870637-64870656 | None:intergenic | 20.0% |
| !!! | TTCTAAAACACTATTTTCAT+TGG | + | chr5_3:64870649-64870668 | Msa0825130:intron | 20.0% |
| !! | ACTATAGCATTATAATAAAG+CGG | + | chr5_3:64870841-64870860 | Msa0825130:intron | 20.0% |
| !! | GTTAAAAATATGTAAAAGTG+AGG | - | chr5_3:64871015-64871034 | None:intergenic | 20.0% |
| !! | AATTATATAAGAGATGGTAA+AGG | - | chr5_3:64871355-64871374 | None:intergenic | 20.0% |
| !! | AAACTCAATTATATAAGAGA+TGG | - | chr5_3:64871361-64871380 | None:intergenic | 20.0% |
| !! | AGGTAGTTATAAATTTCATA+GGG | - | chr5_3:64871390-64871409 | None:intergenic | 20.0% |
| !! | AAGGTAGTTATAAATTTCAT+AGG | - | chr5_3:64871391-64871410 | None:intergenic | 20.0% |
| !! | CTAAATTGTTATGAATTTGA+TGG | + | chr5_3:64871702-64871721 | Msa0825130:intron | 20.0% |
| !! | TACAAGATAATATCATTACA+TGG | - | chr5_3:64872426-64872445 | None:intergenic | 20.0% |
| !! | TTTAGAAATGAAAGAATCAA+GGG | - | chr5_3:64870636-64870655 | None:intergenic | 20.0% |
| !!! | TTTTAGAAATGAAAGAATCA+AGG | - | chr5_3:64870637-64870656 | None:intergenic | 20.0% |
| !!! | TTCTAAAACACTATTTTCAT+TGG | + | chr5_3:64870649-64870668 | Msa0825130:intron | 20.0% |
| !! | ACTATAGCATTATAATAAAG+CGG | + | chr5_3:64870841-64870860 | Msa0825130:intron | 20.0% |
| !! | GTTAAAAATATGTAAAAGTG+AGG | - | chr5_3:64871015-64871034 | None:intergenic | 20.0% |
| !! | AATTATATAAGAGATGGTAA+AGG | - | chr5_3:64871355-64871374 | None:intergenic | 20.0% |
| !! | AAACTCAATTATATAAGAGA+TGG | - | chr5_3:64871361-64871380 | None:intergenic | 20.0% |
| !! | AGGTAGTTATAAATTTCATA+GGG | - | chr5_3:64871390-64871409 | None:intergenic | 20.0% |
| !! | AAGGTAGTTATAAATTTCAT+AGG | - | chr5_3:64871391-64871410 | None:intergenic | 20.0% |
| !! | CTAAATTGTTATGAATTTGA+TGG | + | chr5_3:64871702-64871721 | Msa0825130:intron | 20.0% |
| !! | TACAAGATAATATCATTACA+TGG | - | chr5_3:64872426-64872445 | None:intergenic | 20.0% |
| ! | TTCACTCTTTAATATTGAAG+CGG | + | chr5_3:64870434-64870453 | Msa0825130:CDS | 25.0% |
| !! | ACTATTGAATTTACGTCTTT+TGG | - | chr5_3:64870955-64870974 | None:intergenic | 25.0% |
| ! | AAATATGTAAAAGTGAGGTT+TGG | - | chr5_3:64871010-64871029 | None:intergenic | 25.0% |
| ! | AAATATAGTATAGCTCTTCT+AGG | + | chr5_3:64871300-64871319 | Msa0825130:intron | 25.0% |
| ! | AATATAGTATAGCTCTTCTA+GGG | + | chr5_3:64871301-64871320 | Msa0825130:intron | 25.0% |
| ! | GTAGTTATAAATTTCATAGG+GGG | - | chr5_3:64871388-64871407 | None:intergenic | 25.0% |
| ! | GGTAGTTATAAATTTCATAG+GGG | - | chr5_3:64871389-64871408 | None:intergenic | 25.0% |
| !! | ATAACTACCTTCTAATTTGT+TGG | + | chr5_3:64871400-64871419 | Msa0825130:intron | 25.0% |
| ! | ATATATATCTTATAGCTAGC+TGG | + | chr5_3:64871474-64871493 | Msa0825130:intron | 25.0% |
| !! | TAGAAGGTTGTATTTTGTAA+TGG | - | chr5_3:64871550-64871569 | None:intergenic | 25.0% |
| ! | AAGATTAACTGTAATGTAGA+AGG | - | chr5_3:64871566-64871585 | None:intergenic | 25.0% |
| ! | TACAAAGAAACATTAATACG+TGG | - | chr5_3:64871602-64871621 | None:intergenic | 25.0% |
| ! | AATAAAATGTAACTCAGCAA+AGG | - | chr5_3:64871678-64871697 | None:intergenic | 25.0% |
| ! | TTCTTAAATACAAGATTGGA+AGG | - | chr5_3:64872003-64872022 | None:intergenic | 25.0% |
| ! | AGAGTTCTTAAATACAAGAT+TGG | - | chr5_3:64872007-64872026 | None:intergenic | 25.0% |
| ! | TCTTGTATTTAAGAACTCTA+AGG | + | chr5_3:64872008-64872027 | Msa0825130:CDS | 25.0% |
| !! | TTCCAGTTAATAAGGTATTT+GGG | - | chr5_3:64872077-64872096 | None:intergenic | 25.0% |
| !! | TTTGCAATTGTTGCTATTAA+AGG | + | chr5_3:64872246-64872265 | Msa0825130:CDS | 25.0% |
| ! | TTCACTCTTTAATATTGAAG+CGG | + | chr5_3:64870434-64870453 | Msa0825130:CDS | 25.0% |
| !! | ACTATTGAATTTACGTCTTT+TGG | - | chr5_3:64870955-64870974 | None:intergenic | 25.0% |
| ! | AAATATGTAAAAGTGAGGTT+TGG | - | chr5_3:64871010-64871029 | None:intergenic | 25.0% |
| ! | AAATATAGTATAGCTCTTCT+AGG | + | chr5_3:64871300-64871319 | Msa0825130:intron | 25.0% |
| ! | AATATAGTATAGCTCTTCTA+GGG | + | chr5_3:64871301-64871320 | Msa0825130:intron | 25.0% |
| ! | GTAGTTATAAATTTCATAGG+GGG | - | chr5_3:64871388-64871407 | None:intergenic | 25.0% |
| ! | GGTAGTTATAAATTTCATAG+GGG | - | chr5_3:64871389-64871408 | None:intergenic | 25.0% |
| !! | ATAACTACCTTCTAATTTGT+TGG | + | chr5_3:64871400-64871419 | Msa0825130:intron | 25.0% |
| ! | ATATATATCTTATAGCTAGC+TGG | + | chr5_3:64871474-64871493 | Msa0825130:intron | 25.0% |
| !! | TAGAAGGTTGTATTTTGTAA+TGG | - | chr5_3:64871550-64871569 | None:intergenic | 25.0% |
| ! | AAGATTAACTGTAATGTAGA+AGG | - | chr5_3:64871566-64871585 | None:intergenic | 25.0% |
| ! | TACAAAGAAACATTAATACG+TGG | - | chr5_3:64871602-64871621 | None:intergenic | 25.0% |
| ! | AATAAAATGTAACTCAGCAA+AGG | - | chr5_3:64871678-64871697 | None:intergenic | 25.0% |
| ! | TTCTTAAATACAAGATTGGA+AGG | - | chr5_3:64872003-64872022 | None:intergenic | 25.0% |
| ! | AGAGTTCTTAAATACAAGAT+TGG | - | chr5_3:64872007-64872026 | None:intergenic | 25.0% |
| ! | TCTTGTATTTAAGAACTCTA+AGG | + | chr5_3:64872008-64872027 | Msa0825130:CDS | 25.0% |
| !! | TTCCAGTTAATAAGGTATTT+GGG | - | chr5_3:64872077-64872096 | None:intergenic | 25.0% |
| !! | TTTGCAATTGTTGCTATTAA+AGG | + | chr5_3:64872246-64872265 | Msa0825130:CDS | 25.0% |
| ATACTTGAGAATTAAGATGC+TGG | + | chr5_3:64870572-64870591 | Msa0825130:CDS | 30.0% | |
| TTCCACTGCAAATTTATCAA+GGG | - | chr5_3:64870918-64870937 | None:intergenic | 30.0% | |
| TTTCCACTGCAAATTTATCA+AGG | - | chr5_3:64870919-64870938 | None:intergenic | 30.0% | |
| TCATATATCAGTGTCATGAT+GGG | - | chr5_3:64871051-64871070 | None:intergenic | 30.0% | |
| !!! | TTTTTTTTTCCCCGATTTCT+TGG | + | chr5_3:64871102-64871121 | Msa0825130:intron | 30.0% |
| ATGGCAAGAATGAATAACAT+AGG | + | chr5_3:64871154-64871173 | Msa0825130:intron | 30.0% | |
| GAATAACATAGGAGTTTGAT+TGG | + | chr5_3:64871165-64871184 | Msa0825130:intron | 30.0% | |
| AAGAAACATTAATACGTGGA+AGG | - | chr5_3:64871598-64871617 | None:intergenic | 30.0% | |
| ! | AGGAATGCAATATTTTTCCA+TGG | - | chr5_3:64871658-64871677 | None:intergenic | 30.0% |
| ! | ATTGTTATGAATTTGATGGC+AGG | + | chr5_3:64871706-64871725 | Msa0825130:intron | 30.0% |
| ! | TTGTTATGAATTTGATGGCA+GGG | + | chr5_3:64871707-64871726 | Msa0825130:intron | 30.0% |
| TATATACCAAATTTGGCTGA+TGG | - | chr5_3:64871933-64871952 | None:intergenic | 30.0% | |
| ! | CTTCCAGTTAATAAGGTATT+TGG | - | chr5_3:64872078-64872097 | None:intergenic | 30.0% |
| ATCATAGCTTCCAGTTAATA+AGG | - | chr5_3:64872085-64872104 | None:intergenic | 30.0% | |
| AAGCTATGATGAATACTTGA+GGG | + | chr5_3:64872095-64872114 | Msa0825130:CDS | 30.0% | |
| CTAATTGAAGTCTCATTAAC+AGG | - | chr5_3:64872147-64872166 | None:intergenic | 30.0% | |
| ! | AATGAGACTTCAATTAGCTT+AGG | + | chr5_3:64872150-64872169 | Msa0825130:CDS | 30.0% |
| AAAGGAGAAGTAAATCACAT+GGG | + | chr5_3:64872336-64872355 | Msa0825130:CDS | 30.0% | |
| TTTCTATGACAAACTTGTCA+GGG | + | chr5_3:64872392-64872411 | Msa0825130:CDS | 30.0% | |
| ATACTTGAGAATTAAGATGC+TGG | + | chr5_3:64870572-64870591 | Msa0825130:CDS | 30.0% | |
| TTCCACTGCAAATTTATCAA+GGG | - | chr5_3:64870918-64870937 | None:intergenic | 30.0% | |
| TTTCCACTGCAAATTTATCA+AGG | - | chr5_3:64870919-64870938 | None:intergenic | 30.0% | |
| TCATATATCAGTGTCATGAT+GGG | - | chr5_3:64871051-64871070 | None:intergenic | 30.0% | |
| !!! | TTTTTTTTTCCCCGATTTCT+TGG | + | chr5_3:64871102-64871121 | Msa0825130:intron | 30.0% |
| ATGGCAAGAATGAATAACAT+AGG | + | chr5_3:64871154-64871173 | Msa0825130:intron | 30.0% | |
| GAATAACATAGGAGTTTGAT+TGG | + | chr5_3:64871165-64871184 | Msa0825130:intron | 30.0% | |
| AAGAAACATTAATACGTGGA+AGG | - | chr5_3:64871598-64871617 | None:intergenic | 30.0% | |
| ! | AGGAATGCAATATTTTTCCA+TGG | - | chr5_3:64871658-64871677 | None:intergenic | 30.0% |
| ! | ATTGTTATGAATTTGATGGC+AGG | + | chr5_3:64871706-64871725 | Msa0825130:intron | 30.0% |
| ! | TTGTTATGAATTTGATGGCA+GGG | + | chr5_3:64871707-64871726 | Msa0825130:intron | 30.0% |
| TATATACCAAATTTGGCTGA+TGG | - | chr5_3:64871933-64871952 | None:intergenic | 30.0% | |
| ! | CTTCCAGTTAATAAGGTATT+TGG | - | chr5_3:64872078-64872097 | None:intergenic | 30.0% |
| ATCATAGCTTCCAGTTAATA+AGG | - | chr5_3:64872085-64872104 | None:intergenic | 30.0% | |
| AAGCTATGATGAATACTTGA+GGG | + | chr5_3:64872095-64872114 | Msa0825130:CDS | 30.0% | |
| CTAATTGAAGTCTCATTAAC+AGG | - | chr5_3:64872147-64872166 | None:intergenic | 30.0% | |
| ! | AATGAGACTTCAATTAGCTT+AGG | + | chr5_3:64872150-64872169 | Msa0825130:CDS | 30.0% |
| AAAGGAGAAGTAAATCACAT+GGG | + | chr5_3:64872336-64872355 | Msa0825130:CDS | 30.0% | |
| TTTCTATGACAAACTTGTCA+GGG | + | chr5_3:64872392-64872411 | Msa0825130:CDS | 30.0% | |
| TTGTTCTTAATTCCTGCTTG+TGG | + | chr5_3:64870246-64870265 | Msa0825130:CDS | 35.0% | |
| !! | GTAGCACATTGCTATTTAGA+AGG | + | chr5_3:64870303-64870322 | Msa0825130:CDS | 35.0% |
| !! | TGGAGTTTTGTCCACATAAT+GGG | + | chr5_3:64870340-64870359 | Msa0825130:CDS | 35.0% |
| TGGATACAGCTAAAACATTG+TGG | - | chr5_3:64870368-64870387 | None:intergenic | 35.0% | |
| TTTAATATTGAAGCGGACAC+AGG | + | chr5_3:64870441-64870460 | Msa0825130:CDS | 35.0% | |
| TTTATAGTGAGGAGACTAGT+GGG | + | chr5_3:64870478-64870497 | Msa0825130:CDS | 35.0% | |
| ! | GTGGGATTTTCGATATAAAG+TGG | + | chr5_3:64870496-64870515 | Msa0825130:CDS | 35.0% |
| !!! | GGGAACATAAGTCCTTTTTT+AGG | + | chr5_3:64870531-64870550 | Msa0825130:CDS | 35.0% |
| TTGAGAATTAAGATGCTGGA+TGG | + | chr5_3:64870576-64870595 | Msa0825130:CDS | 35.0% | |
| AATTATACGGTACTTACCCT+CGG | + | chr5_3:64870712-64870731 | Msa0825130:intron | 35.0% | |
| ! | TTGTTGATTAGCAGCTATTG+TGG | + | chr5_3:64870817-64870836 | Msa0825130:intron | 35.0% |
| TTACAGATCGCAGAAAATAG+CGG | - | chr5_3:64870879-64870898 | None:intergenic | 35.0% | |
| TACCCTTGATAAATTTGCAG+TGG | + | chr5_3:64870913-64870932 | Msa0825130:intron | 35.0% | |
| CTCATATATCAGTGTCATGA+TGG | - | chr5_3:64871052-64871071 | None:intergenic | 35.0% | |
| ! | ATTTTCCTTCCAAGAAATCG+GGG | - | chr5_3:64871114-64871133 | None:intergenic | 35.0% |
| ! | CATTTTCCTTCCAAGAAATC+GGG | - | chr5_3:64871115-64871134 | None:intergenic | 35.0% |
| ! | GCATTTTCCTTCCAAGAAAT+CGG | - | chr5_3:64871116-64871135 | None:intergenic | 35.0% |
| !! | TGGTTCAGTATGTGTTTTGA+GGG | - | chr5_3:64871207-64871226 | None:intergenic | 35.0% |
| ! | ATGGTTCAGTATGTGTTTTG+AGG | - | chr5_3:64871208-64871227 | None:intergenic | 35.0% |
| ATAGGCACCAACAAATTAGA+AGG | - | chr5_3:64871410-64871429 | None:intergenic | 35.0% | |
| ! | TTTGGTTTCTCTACATGCAA+AGG | + | chr5_3:64871451-64871470 | Msa0825130:intron | 35.0% |
| ! | TGCAATATTTTTCCATGGCA+AGG | - | chr5_3:64871653-64871672 | None:intergenic | 35.0% |
| ! | TGTTATGAATTTGATGGCAG+GGG | + | chr5_3:64871708-64871727 | Msa0825130:intron | 35.0% |
| TAACTCTATGTGCTTGTATC+TGG | + | chr5_3:64871765-64871784 | Msa0825130:CDS | 35.0% | |
| TTCTCTTCATGAATCCAATC+TGG | + | chr5_3:64871849-64871868 | Msa0825130:CDS | 35.0% | |
| CTCTTCTTGTATTTCCAGAT+TGG | - | chr5_3:64871866-64871885 | None:intergenic | 35.0% | |
| ATCTGGAAATACAAGAAGAG+TGG | + | chr5_3:64871866-64871885 | Msa0825130:CDS | 35.0% | |
| ! | AGGCACATGATTTTGAACTT+TGG | + | chr5_3:64871890-64871909 | Msa0825130:CDS | 35.0% |
| TGATATCCATCAGCCAAATT+TGG | + | chr5_3:64871924-64871943 | Msa0825130:CDS | 35.0% | |
| CAGCCAAATTTGGTATATAC+TGG | + | chr5_3:64871934-64871953 | Msa0825130:CDS | 35.0% | |
| GAGCCAGTATATACCAAATT+TGG | - | chr5_3:64871940-64871959 | None:intergenic | 35.0% | |
| ACAACAAAACTTGCAATCGT+CGG | - | chr5_3:64871962-64871981 | None:intergenic | 35.0% | |
| !!! | ACGATTGCAAGTTTTGTTGT+TGG | + | chr5_3:64871962-64871981 | Msa0825130:CDS | 35.0% |
| !!! | CGATTGCAAGTTTTGTTGTT+GGG | + | chr5_3:64871963-64871982 | Msa0825130:CDS | 35.0% |
| !!! | AGTTTTGTTGTTGGGATTTG+CGG | + | chr5_3:64871971-64871990 | Msa0825130:CDS | 35.0% |
| !! | AACTCTAAGGTCCACAAAAT+GGG | + | chr5_3:64872021-64872040 | Msa0825130:CDS | 35.0% |
| ! | AATAAGGTATTTGGGTCATG+AGG | - | chr5_3:64872069-64872088 | None:intergenic | 35.0% |
| GACCCAAATACCTTATTAAC+TGG | + | chr5_3:64872072-64872091 | Msa0825130:CDS | 35.0% | |
| GAAGCTATGATGAATACTTG+AGG | + | chr5_3:64872094-64872113 | Msa0825130:CDS | 35.0% | |
| GAAAGGAGAAGTAAATCACA+TGG | + | chr5_3:64872335-64872354 | Msa0825130:CDS | 35.0% | |
| CTTTCTATGACAAACTTGTC+AGG | + | chr5_3:64872391-64872410 | Msa0825130:CDS | 35.0% | |
| TTGTTCTTAATTCCTGCTTG+TGG | + | chr5_3:64870246-64870265 | Msa0825130:CDS | 35.0% | |
| !! | GTAGCACATTGCTATTTAGA+AGG | + | chr5_3:64870303-64870322 | Msa0825130:CDS | 35.0% |
| !! | TGGAGTTTTGTCCACATAAT+GGG | + | chr5_3:64870340-64870359 | Msa0825130:CDS | 35.0% |
| TGGATACAGCTAAAACATTG+TGG | - | chr5_3:64870368-64870387 | None:intergenic | 35.0% | |
| TTTAATATTGAAGCGGACAC+AGG | + | chr5_3:64870441-64870460 | Msa0825130:CDS | 35.0% | |
| TTTATAGTGAGGAGACTAGT+GGG | + | chr5_3:64870478-64870497 | Msa0825130:CDS | 35.0% | |
| ! | GTGGGATTTTCGATATAAAG+TGG | + | chr5_3:64870496-64870515 | Msa0825130:CDS | 35.0% |
| !!! | GGGAACATAAGTCCTTTTTT+AGG | + | chr5_3:64870531-64870550 | Msa0825130:CDS | 35.0% |
| TTGAGAATTAAGATGCTGGA+TGG | + | chr5_3:64870576-64870595 | Msa0825130:CDS | 35.0% | |
| AATTATACGGTACTTACCCT+CGG | + | chr5_3:64870712-64870731 | Msa0825130:intron | 35.0% | |
| ! | TTGTTGATTAGCAGCTATTG+TGG | + | chr5_3:64870817-64870836 | Msa0825130:intron | 35.0% |
| TTACAGATCGCAGAAAATAG+CGG | - | chr5_3:64870879-64870898 | None:intergenic | 35.0% | |
| TACCCTTGATAAATTTGCAG+TGG | + | chr5_3:64870913-64870932 | Msa0825130:intron | 35.0% | |
| CTCATATATCAGTGTCATGA+TGG | - | chr5_3:64871052-64871071 | None:intergenic | 35.0% | |
| ! | ATTTTCCTTCCAAGAAATCG+GGG | - | chr5_3:64871114-64871133 | None:intergenic | 35.0% |
| ! | CATTTTCCTTCCAAGAAATC+GGG | - | chr5_3:64871115-64871134 | None:intergenic | 35.0% |
| ! | GCATTTTCCTTCCAAGAAAT+CGG | - | chr5_3:64871116-64871135 | None:intergenic | 35.0% |
| !! | TGGTTCAGTATGTGTTTTGA+GGG | - | chr5_3:64871207-64871226 | None:intergenic | 35.0% |
| ! | ATGGTTCAGTATGTGTTTTG+AGG | - | chr5_3:64871208-64871227 | None:intergenic | 35.0% |
| ATAGGCACCAACAAATTAGA+AGG | - | chr5_3:64871410-64871429 | None:intergenic | 35.0% | |
| ! | TTTGGTTTCTCTACATGCAA+AGG | + | chr5_3:64871451-64871470 | Msa0825130:intron | 35.0% |
| ! | TGCAATATTTTTCCATGGCA+AGG | - | chr5_3:64871653-64871672 | None:intergenic | 35.0% |
| ! | TGTTATGAATTTGATGGCAG+GGG | + | chr5_3:64871708-64871727 | Msa0825130:intron | 35.0% |
| TAACTCTATGTGCTTGTATC+TGG | + | chr5_3:64871765-64871784 | Msa0825130:CDS | 35.0% | |
| TTCTCTTCATGAATCCAATC+TGG | + | chr5_3:64871849-64871868 | Msa0825130:CDS | 35.0% | |
| CTCTTCTTGTATTTCCAGAT+TGG | - | chr5_3:64871866-64871885 | None:intergenic | 35.0% | |
| ATCTGGAAATACAAGAAGAG+TGG | + | chr5_3:64871866-64871885 | Msa0825130:CDS | 35.0% | |
| ! | AGGCACATGATTTTGAACTT+TGG | + | chr5_3:64871890-64871909 | Msa0825130:CDS | 35.0% |
| TGATATCCATCAGCCAAATT+TGG | + | chr5_3:64871924-64871943 | Msa0825130:CDS | 35.0% | |
| CAGCCAAATTTGGTATATAC+TGG | + | chr5_3:64871934-64871953 | Msa0825130:CDS | 35.0% | |
| GAGCCAGTATATACCAAATT+TGG | - | chr5_3:64871940-64871959 | None:intergenic | 35.0% | |
| ACAACAAAACTTGCAATCGT+CGG | - | chr5_3:64871962-64871981 | None:intergenic | 35.0% | |
| !!! | ACGATTGCAAGTTTTGTTGT+TGG | + | chr5_3:64871962-64871981 | Msa0825130:CDS | 35.0% |
| !!! | CGATTGCAAGTTTTGTTGTT+GGG | + | chr5_3:64871963-64871982 | Msa0825130:CDS | 35.0% |
| !!! | AGTTTTGTTGTTGGGATTTG+CGG | + | chr5_3:64871971-64871990 | Msa0825130:CDS | 35.0% |
| !! | AACTCTAAGGTCCACAAAAT+GGG | + | chr5_3:64872021-64872040 | Msa0825130:CDS | 35.0% |
| ! | AATAAGGTATTTGGGTCATG+AGG | - | chr5_3:64872069-64872088 | None:intergenic | 35.0% |
| GACCCAAATACCTTATTAAC+TGG | + | chr5_3:64872072-64872091 | Msa0825130:CDS | 35.0% | |
| GAAGCTATGATGAATACTTG+AGG | + | chr5_3:64872094-64872113 | Msa0825130:CDS | 35.0% | |
| GAAAGGAGAAGTAAATCACA+TGG | + | chr5_3:64872335-64872354 | Msa0825130:CDS | 35.0% | |
| CTTTCTATGACAAACTTGTC+AGG | + | chr5_3:64872391-64872410 | Msa0825130:CDS | 35.0% | |
| AGGCAACTATTTAGTCAGCA+TGG | + | chr5_3:64870278-64870297 | Msa0825130:CDS | 40.0% | |
| !! | GTGGAGTTTTGTCCACATAA+TGG | + | chr5_3:64870339-64870358 | Msa0825130:CDS | 40.0% |
| TCCACTTACACACTACAAGA+AGG | + | chr5_3:64870384-64870403 | Msa0825130:CDS | 40.0% | |
| ACCTTCTTGTAGTGTGTAAG+TGG | - | chr5_3:64870388-64870407 | None:intergenic | 40.0% | |
| GAAATGCTTCCAGATCTACT+GGG | - | chr5_3:64870417-64870436 | None:intergenic | 40.0% | |
| TGAAATGCTTCCAGATCTAC+TGG | - | chr5_3:64870418-64870437 | None:intergenic | 40.0% | |
| GCTTGACACAGTTTATAGTG+AGG | + | chr5_3:64870467-64870486 | Msa0825130:CDS | 40.0% | |
| GTTTATAGTGAGGAGACTAG+TGG | + | chr5_3:64870477-64870496 | Msa0825130:CDS | 40.0% | |
| GCATCTGCTTGACCTAAAAA+AGG | - | chr5_3:64870546-64870565 | None:intergenic | 40.0% | |
| CTCTGATGGAATACAAGGTA+TGG | + | chr5_3:64870602-64870621 | Msa0825130:intron | 40.0% | |
| CCGTTATTTGACAAAACCGA+GGG | - | chr5_3:64870731-64870750 | None:intergenic | 40.0% | |
| !! | CCCTCGGTTTTGTCAAATAA+CGG | + | chr5_3:64870728-64870747 | Msa0825130:intron | 40.0% |
| ! | TTTTTCCCCGATTTCTTGGA+AGG | + | chr5_3:64871106-64871125 | Msa0825130:intron | 40.0% |
| CTGAACATTACGAACAGTGA+TGG | + | chr5_3:64871135-64871154 | Msa0825130:intron | 40.0% | |
| !!! | ATGTGTTTTGAGGGAATCAC+AGG | - | chr5_3:64871198-64871217 | None:intergenic | 40.0% |
| TGTCTGCAAGAATGCATACA+TGG | - | chr5_3:64871261-64871280 | None:intergenic | 40.0% | |
| GATAAAAGCAGTGACATGTG+CGG | + | chr5_3:64871622-64871641 | Msa0825130:intron | 40.0% | |
| CTATGTGCTTGTATCTGGAT+TGG | + | chr5_3:64871770-64871789 | Msa0825130:CDS | 40.0% | |
| GGAAATACAAGAAGAGTGGA+AGG | + | chr5_3:64871870-64871889 | Msa0825130:CDS | 40.0% | |
| ! | TGGCTGATGGATATCAAATG+AGG | - | chr5_3:64871920-64871939 | None:intergenic | 40.0% |
| !!! | GTTTTGTTGTTGGGATTTGC+GGG | + | chr5_3:64871972-64871991 | Msa0825130:CDS | 40.0% |
| !! | GAACTCTAAGGTCCACAAAA+TGG | + | chr5_3:64872020-64872039 | Msa0825130:CDS | 40.0% |
| ! | TGCAAGTAACACCCATTTTG+TGG | - | chr5_3:64872035-64872054 | None:intergenic | 40.0% |
| ATGATGAATACTTGAGGGTG+TGG | + | chr5_3:64872100-64872119 | Msa0825130:CDS | 40.0% | |
| ! | TGATGAATACTTGAGGGTGT+GGG | + | chr5_3:64872101-64872120 | Msa0825130:CDS | 40.0% |
| ! | GAGACTTCAATTAGCTTAGG+TGG | + | chr5_3:64872153-64872172 | Msa0825130:CDS | 40.0% |
| ! | ACTTCAATTAGCTTAGGTGG+AGG | + | chr5_3:64872156-64872175 | Msa0825130:CDS | 40.0% |
| AAAACAAGGCCTTGGATGAA+GGG | - | chr5_3:64872204-64872223 | None:intergenic | 40.0% | |
| GAGAAGTAAATCACATGGGA+GGG | + | chr5_3:64872340-64872359 | Msa0825130:CDS | 40.0% | |
| AAAGAGCAAGTAGCAACTAC+TGG | - | chr5_3:64872375-64872394 | None:intergenic | 40.0% | |
| ATGACAAACTTGTCAGGGTA+TGG | + | chr5_3:64872397-64872416 | Msa0825130:CDS | 40.0% | |
| AGGCAACTATTTAGTCAGCA+TGG | + | chr5_3:64870278-64870297 | Msa0825130:CDS | 40.0% | |
| !! | GTGGAGTTTTGTCCACATAA+TGG | + | chr5_3:64870339-64870358 | Msa0825130:CDS | 40.0% |
| TCCACTTACACACTACAAGA+AGG | + | chr5_3:64870384-64870403 | Msa0825130:CDS | 40.0% | |
| ACCTTCTTGTAGTGTGTAAG+TGG | - | chr5_3:64870388-64870407 | None:intergenic | 40.0% | |
| GAAATGCTTCCAGATCTACT+GGG | - | chr5_3:64870417-64870436 | None:intergenic | 40.0% | |
| TGAAATGCTTCCAGATCTAC+TGG | - | chr5_3:64870418-64870437 | None:intergenic | 40.0% | |
| GCTTGACACAGTTTATAGTG+AGG | + | chr5_3:64870467-64870486 | Msa0825130:CDS | 40.0% | |
| GTTTATAGTGAGGAGACTAG+TGG | + | chr5_3:64870477-64870496 | Msa0825130:CDS | 40.0% | |
| GCATCTGCTTGACCTAAAAA+AGG | - | chr5_3:64870546-64870565 | None:intergenic | 40.0% | |
| CTCTGATGGAATACAAGGTA+TGG | + | chr5_3:64870602-64870621 | Msa0825130:intron | 40.0% | |
| CCGTTATTTGACAAAACCGA+GGG | - | chr5_3:64870731-64870750 | None:intergenic | 40.0% | |
| !! | CCCTCGGTTTTGTCAAATAA+CGG | + | chr5_3:64870728-64870747 | Msa0825130:intron | 40.0% |
| ! | TTTTTCCCCGATTTCTTGGA+AGG | + | chr5_3:64871106-64871125 | Msa0825130:intron | 40.0% |
| CTGAACATTACGAACAGTGA+TGG | + | chr5_3:64871135-64871154 | Msa0825130:intron | 40.0% | |
| !!! | ATGTGTTTTGAGGGAATCAC+AGG | - | chr5_3:64871198-64871217 | None:intergenic | 40.0% |
| TGTCTGCAAGAATGCATACA+TGG | - | chr5_3:64871261-64871280 | None:intergenic | 40.0% | |
| GATAAAAGCAGTGACATGTG+CGG | + | chr5_3:64871622-64871641 | Msa0825130:intron | 40.0% | |
| CTATGTGCTTGTATCTGGAT+TGG | + | chr5_3:64871770-64871789 | Msa0825130:CDS | 40.0% | |
| GGAAATACAAGAAGAGTGGA+AGG | + | chr5_3:64871870-64871889 | Msa0825130:CDS | 40.0% | |
| ! | TGGCTGATGGATATCAAATG+AGG | - | chr5_3:64871920-64871939 | None:intergenic | 40.0% |
| !!! | GTTTTGTTGTTGGGATTTGC+GGG | + | chr5_3:64871972-64871991 | Msa0825130:CDS | 40.0% |
| !! | GAACTCTAAGGTCCACAAAA+TGG | + | chr5_3:64872020-64872039 | Msa0825130:CDS | 40.0% |
| ! | TGCAAGTAACACCCATTTTG+TGG | - | chr5_3:64872035-64872054 | None:intergenic | 40.0% |
| ATGATGAATACTTGAGGGTG+TGG | + | chr5_3:64872100-64872119 | Msa0825130:CDS | 40.0% | |
| ! | TGATGAATACTTGAGGGTGT+GGG | + | chr5_3:64872101-64872120 | Msa0825130:CDS | 40.0% |
| ! | GAGACTTCAATTAGCTTAGG+TGG | + | chr5_3:64872153-64872172 | Msa0825130:CDS | 40.0% |
| ! | ACTTCAATTAGCTTAGGTGG+AGG | + | chr5_3:64872156-64872175 | Msa0825130:CDS | 40.0% |
| AAAACAAGGCCTTGGATGAA+GGG | - | chr5_3:64872204-64872223 | None:intergenic | 40.0% | |
| GAGAAGTAAATCACATGGGA+GGG | + | chr5_3:64872340-64872359 | Msa0825130:CDS | 40.0% | |
| AAAGAGCAAGTAGCAACTAC+TGG | - | chr5_3:64872375-64872394 | None:intergenic | 40.0% | |
| ATGACAAACTTGTCAGGGTA+TGG | + | chr5_3:64872397-64872416 | Msa0825130:CDS | 40.0% | |
| CCTGTTATGAATCCACAAGC+AGG | - | chr5_3:64870261-64870280 | None:intergenic | 45.0% | |
| CCTGCTTGTGGATTCATAAC+AGG | + | chr5_3:64870258-64870277 | Msa0825130:CDS | 45.0% | |
| AGAAGGTAATGCAGATGCTG+TGG | + | chr5_3:64870320-64870339 | Msa0825130:CDS | 45.0% | |
| ACATTGTGGTGCCCATTATG+TGG | - | chr5_3:64870354-64870373 | None:intergenic | 45.0% | |
| ATAAAGTGGAATCCACCTGC+AGG | + | chr5_3:64870510-64870529 | Msa0825130:CDS | 45.0% | |
| TAAAGTGGAATCCACCTGCA+GGG | + | chr5_3:64870511-64870530 | Msa0825130:CDS | 45.0% | |
| AAAGGACTTATGTTCCCTGC+AGG | - | chr5_3:64870528-64870547 | None:intergenic | 45.0% | |
| TTAGGTCAAGCAGATGCTGA+TGG | + | chr5_3:64870549-64870568 | Msa0825130:CDS | 45.0% | |
| GGTTGCTCTGATGGAATACA+AGG | + | chr5_3:64870597-64870616 | Msa0825130:CDS | 45.0% | |
| GCCGTTATTTGACAAAACCG+AGG | - | chr5_3:64870732-64870751 | None:intergenic | 45.0% | |
| ATAACGGCGCTATAGCATAG+CGG | + | chr5_3:64870744-64870763 | Msa0825130:intron | 45.0% | |
| !!! | TTACGTCTTTTGGAGCTCTG+TGG | - | chr5_3:64870945-64870964 | None:intergenic | 45.0% |
| GGCATTTCCTACTCTCACAA+CGG | - | chr5_3:64870989-64871008 | None:intergenic | 45.0% | |
| !! | CAGTGTCATGATGGGTTTCT+AGG | - | chr5_3:64871043-64871062 | None:intergenic | 45.0% |
| TAGCTAGCTGGATATGCACT+TGG | + | chr5_3:64871486-64871505 | Msa0825130:intron | 45.0% | |
| AGCTAGCTGGATATGCACTT+GGG | + | chr5_3:64871487-64871506 | Msa0825130:intron | 45.0% | |
| !! | ACTGTGATGGATGTGGATGA+AGG | - | chr5_3:64871799-64871818 | None:intergenic | 45.0% |
| TCATCCACATCCATCACAGT+AGG | + | chr5_3:64871799-64871818 | Msa0825130:CDS | 45.0% | |
| CATCCACATCCATCACAGTA+GGG | + | chr5_3:64871800-64871819 | Msa0825130:CDS | 45.0% | |
| ATCAGAAAGCCCTACTGTGA+TGG | - | chr5_3:64871812-64871831 | None:intergenic | 45.0% | |
| ATCACAGTAGGGCTTTCTGA+TGG | + | chr5_3:64871811-64871830 | Msa0825130:CDS | 45.0% | |
| TTAGCTTAGGTGGAGGAGTT+TGG | + | chr5_3:64872163-64872182 | Msa0825130:CDS | 45.0% | |
| AAGCATCATCCCTTCATCCA+AGG | + | chr5_3:64872192-64872211 | Msa0825130:CDS | 45.0% | |
| CAAAACAAGGCCTTGGATGA+AGG | - | chr5_3:64872205-64872224 | None:intergenic | 45.0% | |
| !!! | CTTCATCCAAGGCCTTGTTT+TGG | + | chr5_3:64872203-64872222 | Msa0825130:CDS | 45.0% |
| TTGGCTGCTTGCATGCATAA+TGG | + | chr5_3:64872222-64872241 | Msa0825130:CDS | 45.0% | |
| AAGCACGATTCCCTTGCATA+TGG | + | chr5_3:64872300-64872319 | Msa0825130:CDS | 45.0% | |
| GGAGAAGTAAATCACATGGG+AGG | + | chr5_3:64872339-64872358 | Msa0825130:CDS | 45.0% | |
| ACAAACTTGTCAGGGTATGG+AGG | + | chr5_3:64872400-64872419 | Msa0825130:CDS | 45.0% | |
| CCTGTTATGAATCCACAAGC+AGG | - | chr5_3:64870261-64870280 | None:intergenic | 45.0% | |
| CCTGCTTGTGGATTCATAAC+AGG | + | chr5_3:64870258-64870277 | Msa0825130:CDS | 45.0% | |
| AGAAGGTAATGCAGATGCTG+TGG | + | chr5_3:64870320-64870339 | Msa0825130:CDS | 45.0% | |
| ACATTGTGGTGCCCATTATG+TGG | - | chr5_3:64870354-64870373 | None:intergenic | 45.0% | |
| ATAAAGTGGAATCCACCTGC+AGG | + | chr5_3:64870510-64870529 | Msa0825130:CDS | 45.0% | |
| TAAAGTGGAATCCACCTGCA+GGG | + | chr5_3:64870511-64870530 | Msa0825130:CDS | 45.0% | |
| AAAGGACTTATGTTCCCTGC+AGG | - | chr5_3:64870528-64870547 | None:intergenic | 45.0% | |
| TTAGGTCAAGCAGATGCTGA+TGG | + | chr5_3:64870549-64870568 | Msa0825130:CDS | 45.0% | |
| GGTTGCTCTGATGGAATACA+AGG | + | chr5_3:64870597-64870616 | Msa0825130:CDS | 45.0% | |
| GCCGTTATTTGACAAAACCG+AGG | - | chr5_3:64870732-64870751 | None:intergenic | 45.0% | |
| ATAACGGCGCTATAGCATAG+CGG | + | chr5_3:64870744-64870763 | Msa0825130:intron | 45.0% | |
| !!! | TTACGTCTTTTGGAGCTCTG+TGG | - | chr5_3:64870945-64870964 | None:intergenic | 45.0% |
| GGCATTTCCTACTCTCACAA+CGG | - | chr5_3:64870989-64871008 | None:intergenic | 45.0% | |
| !! | CAGTGTCATGATGGGTTTCT+AGG | - | chr5_3:64871043-64871062 | None:intergenic | 45.0% |
| TAGCTAGCTGGATATGCACT+TGG | + | chr5_3:64871486-64871505 | Msa0825130:intron | 45.0% | |
| AGCTAGCTGGATATGCACTT+GGG | + | chr5_3:64871487-64871506 | Msa0825130:intron | 45.0% | |
| !! | ACTGTGATGGATGTGGATGA+AGG | - | chr5_3:64871799-64871818 | None:intergenic | 45.0% |
| TCATCCACATCCATCACAGT+AGG | + | chr5_3:64871799-64871818 | Msa0825130:CDS | 45.0% | |
| CATCCACATCCATCACAGTA+GGG | + | chr5_3:64871800-64871819 | Msa0825130:CDS | 45.0% | |
| ATCAGAAAGCCCTACTGTGA+TGG | - | chr5_3:64871812-64871831 | None:intergenic | 45.0% | |
| ATCACAGTAGGGCTTTCTGA+TGG | + | chr5_3:64871811-64871830 | Msa0825130:CDS | 45.0% | |
| TTAGCTTAGGTGGAGGAGTT+TGG | + | chr5_3:64872163-64872182 | Msa0825130:CDS | 45.0% | |
| AAGCATCATCCCTTCATCCA+AGG | + | chr5_3:64872192-64872211 | Msa0825130:CDS | 45.0% | |
| CAAAACAAGGCCTTGGATGA+AGG | - | chr5_3:64872205-64872224 | None:intergenic | 45.0% | |
| !!! | CTTCATCCAAGGCCTTGTTT+TGG | + | chr5_3:64872203-64872222 | Msa0825130:CDS | 45.0% |
| TTGGCTGCTTGCATGCATAA+TGG | + | chr5_3:64872222-64872241 | Msa0825130:CDS | 45.0% | |
| AAGCACGATTCCCTTGCATA+TGG | + | chr5_3:64872300-64872319 | Msa0825130:CDS | 45.0% | |
| GGAGAAGTAAATCACATGGG+AGG | + | chr5_3:64872339-64872358 | Msa0825130:CDS | 45.0% | |
| ACAAACTTGTCAGGGTATGG+AGG | + | chr5_3:64872400-64872419 | Msa0825130:CDS | 45.0% | |
| TGCTTCCAGATCTACTGGGT+TGG | - | chr5_3:64870413-64870432 | None:intergenic | 50.0% | |
| ATGCTGGATGGTTGCTCTGA+TGG | + | chr5_3:64870588-64870607 | Msa0825130:CDS | 50.0% | |
| AACTGCTCCGTTGTGAGAGT+AGG | + | chr5_3:64870979-64870998 | Msa0825130:intron | 50.0% | |
| ! | TGCACTTGGGCACTTTTCTC+AGG | + | chr5_3:64871500-64871519 | Msa0825130:intron | 50.0% |
| ! | ACTTGGGCACTTTTCTCAGG+AGG | + | chr5_3:64871503-64871522 | Msa0825130:intron | 50.0% |
| ! | GGCACTTTTCTCAGGAGGAT+TGG | + | chr5_3:64871508-64871527 | Msa0825130:intron | 50.0% |
| !! | AAGCCCTACTGTGATGGATG+TGG | - | chr5_3:64871806-64871825 | None:intergenic | 50.0% |
| CTTAGGTGGAGGAGTTTGGA+GGG | + | chr5_3:64872167-64872186 | Msa0825130:CDS | 50.0% | |
| AAGCAGCCAAAACAAGGCCT+TGG | - | chr5_3:64872212-64872231 | None:intergenic | 50.0% | |
| GCATGCAAGCAGCCAAAACA+AGG | - | chr5_3:64872218-64872237 | None:intergenic | 50.0% | |
| AGGCGACAAAGCTGAAGTGT+TGG | + | chr5_3:64872266-64872285 | Msa0825130:CDS | 50.0% | |
| CCAGTCTGCTCCATATGCAA+GGG | - | chr5_3:64872313-64872332 | None:intergenic | 50.0% | |
| TATGGAGCAGACTGGCAGAA+AGG | + | chr5_3:64872318-64872337 | Msa0825130:CDS | 50.0% | |
| TGCTTCCAGATCTACTGGGT+TGG | - | chr5_3:64870413-64870432 | None:intergenic | 50.0% | |
| ATGCTGGATGGTTGCTCTGA+TGG | + | chr5_3:64870588-64870607 | Msa0825130:CDS | 50.0% | |
| AACTGCTCCGTTGTGAGAGT+AGG | + | chr5_3:64870979-64870998 | Msa0825130:intron | 50.0% | |
| ! | TGCACTTGGGCACTTTTCTC+AGG | + | chr5_3:64871500-64871519 | Msa0825130:intron | 50.0% |
| ! | ACTTGGGCACTTTTCTCAGG+AGG | + | chr5_3:64871503-64871522 | Msa0825130:intron | 50.0% |
| ! | GGCACTTTTCTCAGGAGGAT+TGG | + | chr5_3:64871508-64871527 | Msa0825130:intron | 50.0% |
| !! | AAGCCCTACTGTGATGGATG+TGG | - | chr5_3:64871806-64871825 | None:intergenic | 50.0% |
| CTTAGGTGGAGGAGTTTGGA+GGG | + | chr5_3:64872167-64872186 | Msa0825130:CDS | 50.0% | |
| AAGCAGCCAAAACAAGGCCT+TGG | - | chr5_3:64872212-64872231 | None:intergenic | 50.0% | |
| GCATGCAAGCAGCCAAAACA+AGG | - | chr5_3:64872218-64872237 | None:intergenic | 50.0% | |
| AGGCGACAAAGCTGAAGTGT+TGG | + | chr5_3:64872266-64872285 | Msa0825130:CDS | 50.0% | |
| CCAGTCTGCTCCATATGCAA+GGG | - | chr5_3:64872313-64872332 | None:intergenic | 50.0% | |
| TATGGAGCAGACTGGCAGAA+AGG | + | chr5_3:64872318-64872337 | Msa0825130:CDS | 50.0% | |
| GGTGACCAACCCAGTAGATC+TGG | + | chr5_3:64870405-64870424 | Msa0825130:CDS | 55.0% | |
| GGACTTATGTTCCCTGCAGG+TGG | - | chr5_3:64870525-64870544 | None:intergenic | 55.0% | |
| GCTTAGGTGGAGGAGTTTGG+AGG | + | chr5_3:64872166-64872185 | Msa0825130:CDS | 55.0% | |
| CCCTTGCATATGGAGCAGAC+TGG | + | chr5_3:64872310-64872329 | Msa0825130:CDS | 55.0% | |
| GCCAGTCTGCTCCATATGCA+AGG | - | chr5_3:64872314-64872333 | None:intergenic | 55.0% | |
| GGTGACCAACCCAGTAGATC+TGG | + | chr5_3:64870405-64870424 | Msa0825130:CDS | 55.0% | |
| GGACTTATGTTCCCTGCAGG+TGG | - | chr5_3:64870525-64870544 | None:intergenic | 55.0% | |
| GCTTAGGTGGAGGAGTTTGG+AGG | + | chr5_3:64872166-64872185 | Msa0825130:CDS | 55.0% | |
| CCCTTGCATATGGAGCAGAC+TGG | + | chr5_3:64872310-64872329 | Msa0825130:CDS | 55.0% | |
| GCCAGTCTGCTCCATATGCA+AGG | - | chr5_3:64872314-64872333 | None:intergenic | 55.0% | |
| TGTGCGGATGTGCCTTGCCA+TGG | + | chr5_3:64871638-64871657 | Msa0825130:intron | 60.0% | |
| TGTGCGGATGTGCCTTGCCA+TGG | + | chr5_3:64871638-64871657 | Msa0825130:intron | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr5_3 | gene | 64870243 | 64872446 | 64870243 | ID=Msa0825130;Name=Msa0825130 |
| chr5_3 | mRNA | 64870243 | 64872446 | 64870243 | ID=Msa0825130-mRNA-1;Parent=Msa0825130;Name=Msa0825130-mRNA-1;_AED=0.02;_eAED=0.02;_QI=0|1|0|1|1|1|2|0|364 |
| chr5_3 | exon | 64870243 | 64870618 | 64870243 | ID=Msa0825130-mRNA-1:exon:20244;Parent=Msa0825130-mRNA-1 |
| chr5_3 | exon | 64871728 | 64872446 | 64871728 | ID=Msa0825130-mRNA-1:exon:20245;Parent=Msa0825130-mRNA-1 |
| chr5_3 | CDS | 64870243 | 64870618 | 64870243 | ID=Msa0825130-mRNA-1:cds;Parent=Msa0825130-mRNA-1 |
| chr5_3 | CDS | 64871728 | 64872446 | 64871728 | ID=Msa0825130-mRNA-1:cds;Parent=Msa0825130-mRNA-1 |
| Gene Sequence |
| Protein sequence |
