Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0554920 | AES89723.2 | 90.196 | 306 | 7 | 3 | 1 | 306 | 1 | 283 | 0.0 | 548 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0554920 | sp|Q9UTE6|MAK16_SCHPO | 57.812 | 192 | 79 | 1 | 1 | 192 | 1 | 190 | 1.06e-72 | 229 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0554920 | G7JUY3 | 90.196 | 306 | 7 | 3 | 1 | 306 | 1 | 283 | 0.0 | 548 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0003720 | Msa0554920 | 0.824106 | 9.661065e-54 | -8.615850e-47 |
| Msa0003780 | Msa0554920 | 0.839549 | 1.482615e-57 | -8.615850e-47 |
| Msa0003890 | Msa0554920 | 0.804194 | 2.428393e-49 | -8.615850e-47 |
| Msa0011960 | Msa0554920 | 0.816672 | 4.900689e-52 | -8.615850e-47 |
| Msa0026710 | Msa0554920 | 0.810347 | 1.206213e-50 | -8.615850e-47 |
| Msa0027260 | Msa0554920 | 0.807320 | 5.353690e-50 | -8.615850e-47 |
| Msa0029270 | Msa0554920 | 0.806527 | 7.877696e-50 | -8.615850e-47 |
| Msa0030200 | Msa0554920 | 0.810170 | 1.316980e-50 | -8.615850e-47 |
| Msa0032090 | Msa0554920 | 0.860586 | 1.862748e-63 | -8.615850e-47 |
| Msa0032430 | Msa0554920 | 0.860113 | 2.590184e-63 | -8.615850e-47 |
| Msa0032580 | Msa0554920 | 0.835370 | 1.745525e-56 | -8.615850e-47 |
| Msa0033110 | Msa0554920 | 0.864468 | 1.189854e-64 | -8.615850e-47 |
| Msa0033260 | Msa0554920 | 0.867145 | 1.697560e-65 | -8.615850e-47 |
| Msa0040690 | Msa0554920 | 0.847481 | 1.125392e-59 | -8.615850e-47 |
| Msa0042280 | Msa0554920 | 0.801282 | 9.690725e-49 | -8.615850e-47 |
| Msa0043660 | Msa0554920 | 0.833353 | 5.600708e-56 | -8.615850e-47 |
| Msa0047160 | Msa0554920 | 0.853568 | 2.193092e-61 | -8.615850e-47 |
| Msa0048180 | Msa0554920 | 0.802614 | 5.161024e-49 | -8.615850e-47 |
| Msa0054440 | Msa0554920 | 0.827921 | 1.197461e-54 | -8.615850e-47 |
| Msa0054480 | Msa0554920 | 0.828555 | 8.425326e-55 | -8.615850e-47 |
| Msa0058300 | Msa0554920 | 0.801332 | 9.464603e-49 | -8.615850e-47 |
| Msa0059040 | Msa0554920 | 0.817684 | 2.902532e-52 | -8.615850e-47 |
| Msa0059110 | Msa0554920 | 0.833987 | 3.888002e-56 | -8.615850e-47 |
| Msa0063530 | Msa0554920 | 0.816808 | 4.568125e-52 | -8.615850e-47 |
| Msa0070700 | Msa0554920 | 0.840977 | 6.279695e-58 | -8.615850e-47 |
| Msa0072420 | Msa0554920 | 0.800915 | 1.151934e-48 | -8.615850e-47 |
| Msa0079380 | Msa0554920 | 0.853777 | 1.909349e-61 | -8.615850e-47 |
| Msa0079820 | Msa0554920 | 0.836834 | 7.416600e-57 | -8.615850e-47 |
| Msa0086750 | Msa0554920 | 0.817947 | 2.531609e-52 | -8.615850e-47 |
| Msa0090520 | Msa0554920 | 0.815168 | 1.061486e-51 | -8.615850e-47 |
| Msa0091410 | Msa0554920 | 0.865757 | 4.684654e-65 | -8.615850e-47 |
| Msa0094470 | Msa0554920 | 0.863531 | 2.328936e-64 | -8.615850e-47 |
| Msa0100740 | Msa0554920 | 0.807271 | 5.483795e-50 | -8.615850e-47 |
| Msa0105370 | Msa0554920 | 0.812522 | 4.064928e-51 | -8.615850e-47 |
| Msa0105620 | Msa0554920 | 0.804213 | 2.406804e-49 | -8.615850e-47 |
| Msa0115130 | Msa0554920 | 0.828703 | 7.757748e-55 | -8.615850e-47 |
| Msa0115400 | Msa0554920 | 0.822320 | 2.522598e-53 | -8.615850e-47 |
| Msa0118590 | Msa0554920 | 0.844235 | 8.570839e-59 | -8.615850e-47 |
| Msa0118710 | Msa0554920 | 0.803977 | 2.694387e-49 | -8.615850e-47 |
| Msa0127020 | Msa0554920 | 0.820642 | 6.157302e-53 | -8.615850e-47 |
| Msa0127050 | Msa0554920 | 0.812233 | 4.698682e-51 | -8.615850e-47 |
| Msa0137550 | Msa0554920 | 0.841395 | 4.878482e-58 | -8.615850e-47 |
| Msa0137990 | Msa0554920 | 0.815673 | 8.196905e-52 | -8.615850e-47 |
| Msa0144370 | Msa0554920 | 0.850685 | 1.446795e-60 | -8.615850e-47 |
| Msa0146340 | Msa0554920 | 0.808419 | 3.125909e-50 | -8.615850e-47 |
| Msa0150300 | Msa0554920 | 0.824568 | 7.522657e-54 | -8.615850e-47 |
| Msa0159170 | Msa0554920 | 0.822810 | 1.941125e-53 | -8.615850e-47 |
| Msa0159340 | Msa0554920 | 0.811480 | 6.853778e-51 | -8.615850e-47 |
| Msa0160550 | Msa0554920 | 0.810728 | 9.977880e-51 | -8.615850e-47 |
| Msa0165660 | Msa0554920 | 0.838319 | 3.087092e-57 | -8.615850e-47 |
| Msa0169280 | Msa0554920 | 0.818475 | 1.922329e-52 | -8.615850e-47 |
| Msa0169310 | Msa0554920 | 0.811396 | 7.150438e-51 | -8.615850e-47 |
| Msa0170200 | Msa0554920 | 0.802261 | 6.099991e-49 | -8.615850e-47 |
| Msa0172070 | Msa0554920 | 0.861989 | 6.961538e-64 | -8.615850e-47 |
| Msa0172970 | Msa0554920 | 0.826506 | 2.613125e-54 | -8.615850e-47 |
| Msa0183900 | Msa0554920 | 0.812425 | 4.268279e-51 | -8.615850e-47 |
| Msa0187120 | Msa0554920 | 0.809168 | 2.162033e-50 | -8.615850e-47 |
| Msa0189300 | Msa0554920 | 0.858216 | 9.592109e-63 | -8.615850e-47 |
| Msa0220720 | Msa0554920 | 0.853331 | 2.564212e-61 | -8.615850e-47 |
| Msa0229170 | Msa0554920 | 0.823773 | 1.156554e-53 | -8.615850e-47 |
| Msa0231660 | Msa0554920 | 0.833157 | 6.267454e-56 | -8.615850e-47 |
| Msa0366890 | Msa0554920 | 0.817568 | 3.081810e-52 | -8.615850e-47 |
| Msa0385580 | Msa0554920 | 0.822571 | 2.205855e-53 | -8.615850e-47 |
| Msa0388700 | Msa0554920 | 0.818830 | 1.596938e-52 | -8.615850e-47 |
| Msa0395820 | Msa0554920 | 0.818387 | 2.012819e-52 | -8.615850e-47 |
| Msa0397540 | Msa0554920 | 0.809890 | 1.513242e-50 | -8.615850e-47 |
| Msa0402650 | Msa0554920 | 0.822327 | 2.514106e-53 | -8.615850e-47 |
| Msa0411430 | Msa0554920 | 0.812611 | 3.886527e-51 | -8.615850e-47 |
| Msa0437020 | Msa0554920 | 0.808848 | 2.531330e-50 | -8.615850e-47 |
| Msa0449210 | Msa0554920 | 0.811925 | 5.486882e-51 | -8.615850e-47 |
| Msa0467380 | Msa0554920 | 0.819917 | 9.026904e-53 | -8.615850e-47 |
| Msa0472550 | Msa0554920 | 0.808297 | 3.319913e-50 | -8.615850e-47 |
| Msa0481530 | Msa0554920 | 0.831632 | 1.495516e-55 | -8.615850e-47 |
| Msa0482130 | Msa0554920 | 0.826975 | 2.019976e-54 | -8.615850e-47 |
| Msa0241390 | Msa0554920 | 0.814693 | 1.353083e-51 | -8.615850e-47 |
| Msa0242410 | Msa0554920 | 0.802546 | 5.330650e-49 | -8.615850e-47 |
| Msa0258390 | Msa0554920 | 0.847538 | 1.085673e-59 | -8.615850e-47 |
| Msa0262050 | Msa0554920 | 0.802690 | 4.978547e-49 | -8.615850e-47 |
| Msa0265430 | Msa0554920 | 0.802827 | 4.663846e-49 | -8.615850e-47 |
| Msa0279220 | Msa0554920 | 0.818087 | 2.353538e-52 | -8.615850e-47 |
| Msa0279240 | Msa0554920 | 0.854082 | 1.559252e-61 | -8.615850e-47 |
| Msa0295460 | Msa0554920 | -0.808090 | 3.673017e-50 | -8.615850e-47 |
| Msa0297610 | Msa0554920 | 0.831436 | 1.671518e-55 | -8.615850e-47 |
| Msa0299870 | Msa0554920 | 0.846988 | 1.536919e-59 | -8.615850e-47 |
| Msa0309750 | Msa0554920 | 0.832121 | 1.132364e-55 | -8.615850e-47 |
| Msa0309770 | Msa0554920 | 0.807564 | 4.751931e-50 | -8.615850e-47 |
| Msa0318980 | Msa0554920 | 0.841520 | 4.520189e-58 | -8.615850e-47 |
| Msa0322240 | Msa0554920 | 0.804286 | 2.323517e-49 | -8.615850e-47 |
| Msa0326480 | Msa0554920 | 0.812204 | 4.768751e-51 | -8.615850e-47 |
| Msa0327330 | Msa0554920 | 0.819185 | 1.326086e-52 | -8.615850e-47 |
| Msa0335730 | Msa0554920 | 0.848714 | 5.138272e-60 | -8.615850e-47 |
| Msa0337240 | Msa0554920 | 0.830575 | 2.719239e-55 | -8.615850e-47 |
| Msa0340380 | Msa0554920 | 0.829744 | 4.336133e-55 | -8.615850e-47 |
| Msa0351990 | Msa0554920 | 0.809645 | 1.707792e-50 | -8.615850e-47 |
| Msa0357900 | Msa0554920 | 0.861731 | 8.348464e-64 | -8.615850e-47 |
| Msa0493410 | Msa0554920 | 0.805775 | 1.134250e-49 | -8.615850e-47 |
| Msa0497210 | Msa0554920 | 0.824403 | 8.224946e-54 | -8.615850e-47 |
| Msa0510930 | Msa0554920 | 0.814816 | 1.270709e-51 | -8.615850e-47 |
| Msa0523120 | Msa0554920 | 0.814896 | 1.220024e-51 | -8.615850e-47 |
| Msa0527020 | Msa0554920 | 0.809027 | 2.317459e-50 | -8.615850e-47 |
| Msa0529890 | Msa0554920 | 0.828320 | 9.599051e-55 | -8.615850e-47 |
| Msa0539410 | Msa0554920 | 0.803822 | 2.902312e-49 | -8.615850e-47 |
| Msa0542090 | Msa0554920 | 0.824939 | 6.150796e-54 | -8.615850e-47 |
| Msa0542130 | Msa0554920 | 0.826903 | 2.101568e-54 | -8.615850e-47 |
| Msa0554290 | Msa0554920 | 0.802398 | 5.717417e-49 | -8.615850e-47 |
| Msa0554920 | Msa0556060 | 0.809627 | 1.723227e-50 | -8.615850e-47 |
| Msa0554920 | Msa0561630 | 0.807194 | 5.692528e-50 | -8.615850e-47 |
| Msa0554920 | Msa0572840 | 0.816664 | 4.920884e-52 | -8.615850e-47 |
| Msa0554920 | Msa0581110 | 0.804890 | 1.738618e-49 | -8.615850e-47 |
| Msa0554920 | Msa0581280 | 0.874562 | 6.127943e-68 | -8.615850e-47 |
| Msa0554920 | Msa0585560 | 0.834767 | 2.477636e-56 | -8.615850e-47 |
| Msa0554920 | Msa0588360 | 0.817541 | 3.126521e-52 | -8.615850e-47 |
| Msa0554920 | Msa0601150 | 0.824176 | 9.299542e-54 | -8.615850e-47 |
| Msa0554920 | Msa0602690 | 0.816516 | 5.310938e-52 | -8.615850e-47 |
| Msa0554920 | Msa0608500 | 0.974810 | 8.121058e-139 | -8.615850e-47 |
| Msa0554920 | Msa0615440 | 0.828520 | 8.589474e-55 | -8.615850e-47 |
| Msa0554920 | Msa0623790 | 0.825019 | 5.887970e-54 | -8.615850e-47 |
| Msa0554920 | Msa0625720 | 0.829587 | 4.736524e-55 | -8.615850e-47 |
| Msa0554920 | Msa0626630 | 0.827702 | 1.351709e-54 | -8.615850e-47 |
| Msa0554920 | Msa0634890 | 0.800501 | 1.399123e-48 | -8.615850e-47 |
| Msa0554920 | Msa0636070 | 0.800193 | 1.616480e-48 | -8.615850e-47 |
| Msa0554920 | Msa0643560 | 0.843244 | 1.578426e-58 | -8.615850e-47 |
| Msa0554920 | Msa0643570 | 0.822278 | 2.580306e-53 | -8.615850e-47 |
| Msa0554920 | Msa0648780 | 0.803617 | 3.200814e-49 | -8.615850e-47 |
| Msa0554920 | Msa0649020 | 0.958358 | 2.868546e-116 | -8.615850e-47 |
| Msa0554920 | Msa0649050 | 0.968852 | 2.859767e-129 | -8.615850e-47 |
| Msa0554920 | Msa0663390 | 0.834362 | 3.131907e-56 | -8.615850e-47 |
| Msa0554920 | Msa0664750 | 0.819537 | 1.102798e-52 | -8.615850e-47 |
| Msa0554920 | Msa0685140 | 0.810186 | 1.306173e-50 | -8.615850e-47 |
| Msa0554920 | Msa0689260 | 0.848955 | 4.405341e-60 | -8.615850e-47 |
| Msa0554920 | Msa0691290 | 0.810501 | 1.117114e-50 | -8.615850e-47 |
| Msa0554920 | Msa0691530 | 0.970954 | 2.082130e-132 | -8.615850e-47 |
| Msa0554920 | Msa0691900 | 0.804215 | 2.404294e-49 | -8.615850e-47 |
| Msa0554920 | Msa0698490 | 0.833686 | 4.625229e-56 | -8.615850e-47 |
| Msa0554920 | Msa0698540 | 0.807237 | 5.575692e-50 | -8.615850e-47 |
| Msa0554920 | Msa0698660 | 0.826943 | 2.055385e-54 | -8.615850e-47 |
| Msa0554920 | Msa0698800 | 0.836215 | 1.066237e-56 | -8.615850e-47 |
| Msa0554920 | Msa0707250 | 0.837912 | 3.927125e-57 | -8.615850e-47 |
| Msa0554920 | Msa0711780 | 0.826129 | 3.214188e-54 | -8.615850e-47 |
| Msa0554920 | Msa0715700 | 0.811852 | 5.690956e-51 | -8.615850e-47 |
| Msa0554920 | Msa0719420 | 0.806701 | 7.239477e-50 | -8.615850e-47 |
| Msa0554920 | Msa0788850 | 0.833393 | 5.472628e-56 | -8.615850e-47 |
| Msa0554920 | Msa0789680 | 0.807209 | 5.653257e-50 | -8.615850e-47 |
| Msa0554920 | Msa0793800 | 0.805509 | 1.289830e-49 | -8.615850e-47 |
| Msa0554920 | Msa0794670 | 0.825044 | 5.807620e-54 | -8.615850e-47 |
| Msa0554920 | Msa0798440 | 0.801249 | 9.841719e-49 | -8.615850e-47 |
| Msa0554920 | Msa0808270 | 0.808535 | 2.952525e-50 | -8.615850e-47 |
| Msa0554920 | Msa0825130 | 0.808159 | 3.551293e-50 | -8.615850e-47 |
| Msa0554920 | Msa0830540 | 0.816429 | 5.555134e-52 | -8.615850e-47 |
| Msa0554920 | Msa0831530 | 0.817767 | 2.780369e-52 | -8.615850e-47 |
| Msa0554920 | Msa0876810 | 0.834306 | 3.235001e-56 | -8.615850e-47 |
| Msa0554920 | Msa0902760 | 0.811874 | 5.626527e-51 | -8.615850e-47 |
| Msa0554920 | Msa0945440 | 0.812499 | 4.112185e-51 | -8.615850e-47 |
| Msa0554920 | Msa0987370 | 0.802614 | 5.159478e-49 | -8.615850e-47 |
| Msa0554920 | Msa0989540 | 0.836891 | 7.172713e-57 | -8.615850e-47 |
| Msa0554920 | Msa0999970 | 0.819755 | 9.832768e-53 | -8.615850e-47 |
| Msa0554920 | Msa1006840 | 0.858627 | 7.232960e-63 | -8.615850e-47 |
| Msa0554920 | Msa1012740 | 0.803083 | 4.128596e-49 | -8.615850e-47 |
| Msa0554920 | Msa1013400 | 0.809328 | 1.997369e-50 | -8.615850e-47 |
| Msa0554920 | Msa1019240 | 0.800687 | 1.282455e-48 | -8.615850e-47 |
| Msa0554920 | Msa1019260 | 0.800996 | 1.108997e-48 | -8.615850e-47 |
| Msa0554920 | Msa1021520 | 0.820585 | 6.346329e-53 | -8.615850e-47 |
| Msa0554920 | Msa1043690 | 0.828530 | 8.541398e-55 | -8.615850e-47 |
| Msa0554920 | Msa1051200 | 0.814845 | 1.251694e-51 | -8.615850e-47 |
| Msa0554920 | Msa1060260 | 0.803161 | 3.978588e-49 | -8.615850e-47 |
| Msa0554920 | Msa1077030 | 0.815495 | 8.978902e-52 | -8.615850e-47 |
| Msa0554920 | Msa1080640 | 0.815224 | 1.031644e-51 | -8.615850e-47 |
| Msa0554920 | Msa1081930 | 0.816118 | 6.519851e-52 | -8.615850e-47 |
| Msa0554920 | Msa1081980 | 0.809324 | 2.002066e-50 | -8.615850e-47 |
| Msa0554920 | Msa1082810 | 0.800226 | 1.591966e-48 | -8.615850e-47 |
| Msa0554920 | Msa1088640 | 0.800058 | 1.722037e-48 | -8.615850e-47 |
| Msa0554920 | Msa1093530 | 0.812137 | 4.932332e-51 | -8.615850e-47 |
| Msa0554920 | Msa1104140 | 0.856804 | 2.510490e-62 | -8.615850e-47 |
| Msa0554920 | Msa1104210 | 0.820265 | 7.516883e-53 | -8.615850e-47 |
| Msa0554920 | Msa1106700 | 0.839603 | 1.435783e-57 | -8.615850e-47 |
| Msa0554920 | Msa1121440 | 0.822993 | 1.758998e-53 | -8.615850e-47 |
| Msa0554920 | Msa1123770 | 0.807186 | 5.716398e-50 | -8.615850e-47 |
| Msa0554920 | Msa1126830 | 0.805240 | 1.468357e-49 | -8.615850e-47 |
| Msa0554920 | Msa1135890 | 0.841132 | 5.717755e-58 | -8.615850e-47 |
| Msa0554920 | Msa1137700 | 0.801030 | 1.091201e-48 | -8.615850e-47 |
| Msa0554920 | Msa1148910 | 0.806592 | 7.634148e-50 | -8.615850e-47 |
| Msa0554920 | Msa1160590 | 0.816471 | 5.437843e-52 | -8.615850e-47 |
| Msa0554920 | Msa1169910 | 0.804861 | 1.763063e-49 | -8.615850e-47 |
| Msa0554920 | Msa1170670 | 0.805699 | 1.176498e-49 | -8.615850e-47 |
| Msa0554920 | Msa1181250 | 0.837082 | 6.409485e-57 | -8.615850e-47 |
| Msa0554920 | Msa1181330 | 0.831707 | 1.433003e-55 | -8.615850e-47 |
| Msa0554920 | Msa1181910 | 0.836842 | 7.384109e-57 | -8.615850e-47 |
| Msa0554920 | Msa1206670 | 0.809773 | 1.602816e-50 | -8.615850e-47 |
| Msa0554920 | Msa1208880 | 0.833586 | 4.897787e-56 | -8.615850e-47 |
| Msa0554920 | Msa1209200 | 0.886027 | 4.885220e-72 | -8.615850e-47 |
| Msa0554920 | Msa1209260 | 0.821261 | 4.435659e-53 | -8.615850e-47 |
| Msa0554920 | Msa1237630 | 0.806384 | 8.443670e-50 | -8.615850e-47 |
| Msa0554920 | Msa1245930 | 0.829346 | 5.420179e-55 | -8.615850e-47 |
| Msa0554920 | Msa1254730 | 0.833204 | 6.099287e-56 | -8.615850e-47 |
| Msa0554920 | Msa1259060 | 0.830837 | 2.345159e-55 | -8.615850e-47 |
| Msa0554920 | Msa1265630 | 0.855374 | 6.587090e-62 | -8.615850e-47 |
| Msa0554920 | Msa1275680 | 0.800393 | 1.472177e-48 | -8.615850e-47 |
| Msa0554920 | Msa1294820 | 0.829234 | 5.767840e-55 | -8.615850e-47 |
| Msa0554920 | Msa1302380 | 0.820807 | 5.641703e-53 | -8.615850e-47 |
| Msa0554920 | Msa1332590 | 0.850698 | 1.435292e-60 | -8.615850e-47 |
| Msa0554920 | Msa1351540 | 0.808176 | 3.522342e-50 | -8.615850e-47 |
| Msa0554920 | Msa1358250 | 0.848782 | 4.921879e-60 | -8.615850e-47 |
| Msa0554920 | Msa1360980 | 0.807641 | 4.576467e-50 | -8.615850e-47 |
| Msa0554920 | Msa1374120 | 0.848404 | 6.263910e-60 | -8.615850e-47 |
| Msa0554920 | Msa1382560 | 0.821610 | 3.683654e-53 | -8.615850e-47 |
| Msa0554920 | Msa1382620 | 0.821327 | 4.283252e-53 | -8.615850e-47 |
| Msa0554920 | Msa1385720 | 0.806483 | 8.047367e-50 | -8.615850e-47 |
| Msa0554920 | Msa1386600 | 0.801497 | 8.755845e-49 | -8.615850e-47 |
| Msa0554920 | Msa1392780 | 0.838656 | 2.526127e-57 | -8.615850e-47 |
| Msa0554920 | Msa1393570 | 0.840254 | 9.711151e-58 | -8.615850e-47 |
| Msa0554920 | Msa1394290 | 0.877627 | 5.399255e-69 | -8.615850e-47 |
| Msa0554920 | Msa1400580 | 0.842378 | 2.681557e-58 | -8.615850e-47 |
| Msa0554920 | Msa1405930 | 0.806274 | 8.908216e-50 | -8.615850e-47 |
| Msa0554920 | Msa1419870 | 0.816274 | 6.016214e-52 | -8.615850e-47 |
| Msa0554920 | Msa1423350 | 0.800001 | 1.768930e-48 | -8.615850e-47 |
| Msa0554920 | Msa1432420 | 0.801912 | 7.197920e-49 | -8.615850e-47 |
| Msa0554920 | Msa1432700 | 0.828568 | 8.364234e-55 | -8.615850e-47 |
| Msa0554920 | Msa1434090 | 0.812181 | 4.823465e-51 | -8.615850e-47 |
| Msa0554920 | Msa1435390 | 0.811665 | 6.250176e-51 | -8.615850e-47 |
| Msa0554920 | Msa1439550 | 0.808557 | 2.920735e-50 | -8.615850e-47 |
| Msa0554920 | Msa1440930 | 0.813485 | 2.499151e-51 | -8.615850e-47 |
| Msa0554920 | Msa1444310 | 0.805537 | 1.272750e-49 | -8.615850e-47 |
| Msa0554920 | Msa1446950 | 0.827075 | 1.910997e-54 | -8.615850e-47 |
| Msa0554920 | Msa1457920 | 0.862649 | 4.364720e-64 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0554920 | MtrunA17_Chr2g0332911 | 71.343 | 335 | 63 | 2 | 1 | 305 | 1 | 332 | 2.22e-156 | 440 |
| Msa0554920 | MtrunA17_Chr4g0040641 | 92.188 | 192 | 12 | 2 | 115 | 306 | 1 | 189 | 9.74e-103 | 298 |
| Msa0554920 | MtrunA17_Chr4g0040651 | 100.000 | 110 | 0 | 0 | 1 | 110 | 1 | 110 | 1.19e-83 | 247 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0554920 | AT1G23280.1 | 74.611 | 193 | 47 | 1 | 1 | 193 | 1 | 191 | 1.38e-105 | 310 |
Find 61 sgRNAs with CRISPR-Local
Find 249 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AGAAACGACTAATCAAAATT+TGG | 0.234048 | 4_1:+52670030 | None:intergenic |
| GAAGATGATATAGAAGATTT+TGG | 0.237046 | 4_1:-52672084 | Msa0554920:CDS |
| AAACGACGTTTGCTTCATTC+AGG | 0.288021 | 4_1:+52674252 | None:intergenic |
| GACTTTAGCTTCAAAGAAAC+TGG | 0.316024 | 4_1:-52670869 | Msa0554920:CDS |
| TATCCGCATCTGAGTCATTT+TGG | 0.319490 | 4_1:+52672807 | None:intergenic |
| CAAATTCCGGTGACATTGTA+AGG | 0.322485 | 4_1:+52674039 | None:intergenic |
| AGGTTATATGGCAAGTTATC+AGG | 0.341917 | 4_1:-52674116 | Msa0554920:CDS |
| TGAACTTCGGTTACAAATTC+CGG | 0.346804 | 4_1:+52674026 | None:intergenic |
| GTCTATTGAGAAAGAGCTAT+TGG | 0.348403 | 4_1:-52672395 | Msa0554920:CDS |
| TTAATCAAAGGAAAGCAAAA+AGG | 0.387263 | 4_1:-52670897 | Msa0554920:CDS |
| TGCAGCACGATGAGGTTATA+TGG | 0.401960 | 4_1:-52674128 | Msa0554920:CDS |
| ATCTTGTGTATAAGAAGCTT+GGG | 0.406860 | 4_1:+52672844 | None:intergenic |
| TACTGCACTGACAGATGTAT+TGG | 0.411812 | 4_1:-52672867 | Msa0554920:intron |
| ACTCTTTCCCACAAATCCTT+TGG | 0.416287 | 4_1:+52673032 | None:intergenic |
| AATGGCAGCGATGATGAAAA+TGG | 0.418107 | 4_1:-52672033 | Msa0554920:intron |
| AAAGGGAATGGTTTCGATGC+AGG | 0.431671 | 4_1:+52674205 | None:intergenic |
| TATCTTGTGTATAAGAAGCT+TGG | 0.432339 | 4_1:+52672843 | None:intergenic |
| TGCATATATCACCTCCTGTC+TGG | 0.447878 | 4_1:+52672350 | None:intergenic |
| TGTTGAAGAAGAGGATGAAA+TGG | 0.458882 | 4_1:-52672272 | Msa0554920:intron |
| CTCATACGCCAAAGGATTTG+TGG | 0.458884 | 4_1:-52673040 | Msa0554920:CDS |
| ATTGAAGAGGAAACAGAAAC+AGG | 0.469123 | 4_1:-52672132 | Msa0554920:CDS |
| AGCTTCAAAGAAACTGGAAA+AGG | 0.487427 | 4_1:-52670863 | Msa0554920:CDS |
| ATCTCAAGCTGTTGAAGAAG+AGG | 0.492311 | 4_1:-52672281 | Msa0554920:CDS |
| AACGACACTGCCAAGAAAAG+AGG | 0.508652 | 4_1:-52672557 | Msa0554920:CDS |
| GCACAACCATTGCAGTTACA+TGG | 0.509010 | 4_1:-52674094 | Msa0554920:CDS |
| TGAAGTCATTGACAAACATC+TGG | 0.510638 | 4_1:-52672979 | Msa0554920:intron |
| CATAGCGACTATTAGCTAAA+GGG | 0.510834 | 4_1:+52674001 | None:intergenic |
| AAAAGCAGCTGTGCTAGAAA+AGG | 0.513340 | 4_1:-52672500 | Msa0554920:intron |
| ATTCACGAGTCACAGGGAAA+TGG | 0.513739 | 4_1:-52672051 | Msa0554920:CDS |
| GCATAGCGACTATTAGCTAA+AGG | 0.516741 | 4_1:+52674000 | None:intergenic |
| CTCAGATGCGGATACGTATG+AGG | 0.518871 | 4_1:-52672798 | Msa0554920:CDS |
| AGAATATGTTGAATTTGAAG+AGG | 0.522267 | 4_1:-52672106 | Msa0554920:CDS |
| AAGGGAATGGTTTCGATGCA+GGG | 0.522545 | 4_1:+52674206 | None:intergenic |
| CAATGACTTCAAGTGCCTGC+TGG | 0.525481 | 4_1:+52672991 | None:intergenic |
| TCATACGCCAAAGGATTTGT+GGG | 0.528939 | 4_1:-52673039 | Msa0554920:CDS |
| AGTGCCTGCTGGTAATTCCT+AGG | 0.529178 | 4_1:+52673002 | None:intergenic |
| TTTCTTTGATTTAGAATCAG+AGG | 0.543640 | 4_1:+52670837 | None:intergenic |
| GGGAAAGAGTTAAGCTGCCT+AGG | 0.548712 | 4_1:-52673019 | Msa0554920:CDS |
| GGAAACTTTCTTTGAAAACA+AGG | 0.556860 | 4_1:-52672777 | Msa0554920:intron |
| TAGCTAAAGGGCATGAACTT+CGG | 0.561734 | 4_1:+52674013 | None:intergenic |
| ACCATTGTCTTCACGAATGG+TGG | 0.572329 | 4_1:+52673978 | None:intergenic |
| CAAAACGGACTTTACCAGAC+AGG | 0.572560 | 4_1:-52672364 | Msa0554920:CDS |
| GTTTGAAAGGAAGCCAGTGT+TGG | 0.577184 | 4_1:-52669923 | Msa0554920:three_prime_UTR |
| AAACTGAAGCACTTAATCAA+AGG | 0.580098 | 4_1:-52670909 | Msa0554920:CDS |
| AGTACCATTGTCTTCACGAA+TGG | 0.580983 | 4_1:+52673975 | None:intergenic |
| AAATTCCGGTGACATTGTAA+GGG | 0.585183 | 4_1:+52674040 | None:intergenic |
| CTATTGGTACGCCTTCAAAA+CGG | 0.597593 | 4_1:-52672379 | Msa0554920:CDS |
| AGAAACCCTTACAATGTCAC+CGG | 0.609253 | 4_1:-52674045 | Msa0554920:CDS |
| GAAAGCGAAGGTCCTCATTG+AGG | 0.612298 | 4_1:-52670818 | Msa0554920:intron |
| TTCTAAATCAAAGAAAGCGA+AGG | 0.616150 | 4_1:-52670830 | Msa0554920:CDS |
| AACACGACGATGCTGTCGAA+AGG | 0.621867 | 4_1:-52670122 | Msa0554920:CDS |
| TTTGCAATTCACGAGTCACA+GGG | 0.623320 | 4_1:-52672057 | Msa0554920:CDS |
| GCTGCCTAGGAATTACCAGC+AGG | 0.624895 | 4_1:-52673006 | Msa0554920:CDS |
| CACAAAGATGCAGCACGATG+AGG | 0.628152 | 4_1:-52674136 | Msa0554920:exon |
| TGAAAGAGCTCATACGCCAA+AGG | 0.633610 | 4_1:-52673048 | Msa0554920:CDS |
| AGTATAAAATTACCTCAATG+AGG | 0.639733 | 4_1:+52670806 | None:intergenic |
| TACATGGCCAAAATTACCAC+CGG | 0.640975 | 4_1:-52674078 | Msa0554920:CDS |
| GCCACCATTCGTGAAGACAA+TGG | 0.656349 | 4_1:-52673979 | Msa0554920:intron |
| TGCTGTCGAAAGGCAAAGAG+CGG | 0.666319 | 4_1:-52670112 | Msa0554920:CDS |
| AACGGACTTTACCAGACAGG+AGG | 0.681084 | 4_1:-52672361 | Msa0554920:CDS |
| TGACCAAAATGACTCAGATG+CGG | 0.687329 | 4_1:-52672810 | Msa0554920:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | AAATGTCATTTTAATCAAAT+GGG | + | chr4_1:52670299-52670318 | None:intergenic | 15.0% |
| !!! | TAAATGTCATTTTAATCAAA+TGG | + | chr4_1:52670300-52670319 | None:intergenic | 15.0% |
| !! | ATTTGATTAAAATGACATTT+AGG | - | chr4_1:52670299-52670318 | Msa0554920:intron | 15.0% |
| !!! | AATAATAAGTTGATAGTTTA+TGG | - | chr4_1:52670973-52670992 | Msa0554920:intron | 15.0% |
| !! | ATACAAAAAAGTTATTGATA+TGG | - | chr4_1:52671803-52671822 | Msa0554920:intron | 15.0% |
| !!! | ATAATGGAAGATAATAAAAT+GGG | + | chr4_1:52673024-52673043 | None:intergenic | 15.0% |
| !!! | ATCTTTGTGATCAAATTTTA+AGG | + | chr4_1:52669967-52669986 | None:intergenic | 20.0% |
| !! | ATATAGTTATGAAATTCTTG+TGG | - | chr4_1:52670213-52670232 | Msa0554920:intron | 20.0% |
| !! | TATAGTTATGAAATTCTTGT+GGG | - | chr4_1:52670214-52670233 | Msa0554920:intron | 20.0% |
| !!! | TATTACATTTTCCATTCAAA+AGG | + | chr4_1:52670957-52670976 | None:intergenic | 20.0% |
| !! | TTATTGTTAAAAAGAAGCAA+AGG | + | chr4_1:52671379-52671398 | None:intergenic | 20.0% |
| !!! | TCCTTTATCTACTATATTTT+AGG | - | chr4_1:52671444-52671463 | Msa0554920:intron | 20.0% |
| !! | AAATTCTTAGTAACTTAACT+TGG | - | chr4_1:52671920-52671939 | Msa0554920:intron | 20.0% |
| !! | AAAGATAAAAGAAATATACC+AGG | + | chr4_1:52671958-52671977 | None:intergenic | 20.0% |
| !! | TGCTAAAATATATGTGAAAT+AGG | - | chr4_1:52672162-52672181 | Msa0554920:intron | 20.0% |
| !! | AATATATGTGAAATAGGTTA+TGG | - | chr4_1:52672168-52672187 | Msa0554920:intron | 20.0% |
| !! | AACTAAAATACAAAAGATTC+TGG | - | chr4_1:52672247-52672266 | Msa0554920:intron | 20.0% |
| !! | TAAAATAATCATCCATAGTA+TGG | + | chr4_1:52672566-52672585 | None:intergenic | 20.0% |
| !!! | TATTTTATCTTTTCCTTGTT+TGG | - | chr4_1:52672579-52672598 | Msa0554920:intron | 20.0% |
| !! | GTAAATAGATGAGTAAAAAA+TGG | + | chr4_1:52672788-52672807 | None:intergenic | 20.0% |
| !! | CTTGATAAATAAGAATCAAA+AGG | + | chr4_1:52672832-52672851 | None:intergenic | 20.0% |
| !!! | CTTTTGATTCTTATTTATCA+AGG | - | chr4_1:52672830-52672849 | Msa0554920:CDS | 20.0% |
| !!! | GTGAATTTTGTCTATTTTTT+GGG | + | chr4_1:52672960-52672979 | None:intergenic | 20.0% |
| !!! | AGTGAATTTTGTCTATTTTT+TGG | + | chr4_1:52672961-52672980 | None:intergenic | 20.0% |
| !!! | GATAATGGAAGATAATAAAA+TGG | + | chr4_1:52673025-52673044 | None:intergenic | 20.0% |
| !! | ATTAAAAAGCAATAACATGA+TGG | - | chr4_1:52673146-52673165 | Msa0554920:intron | 20.0% |
| !! | AACATTCTGTTATAATTTGA+AGG | - | chr4_1:52673475-52673494 | Msa0554920:intron | 20.0% |
| !!! | TTTAGAACTTACGAAATTTT+AGG | + | chr4_1:52673933-52673952 | None:intergenic | 20.0% |
| !!! | TTTTGATTTTCATTGTTTTC+AGG | - | chr4_1:52673966-52673985 | Msa0554920:intron | 20.0% |
| !!! | TTATTTTGCTTTTGTTTGAA+AGG | - | chr4_1:52674178-52674197 | Msa0554920:five_prime_UTR | 20.0% |
| ! | ATAGTTATGAAATTCTTGTG+GGG | - | chr4_1:52670215-52670234 | Msa0554920:intron | 25.0% |
| ! | ACTTTGATATCTTAGACATT+TGG | - | chr4_1:52670337-52670356 | Msa0554920:intron | 25.0% |
| ! | CATGTCAATGATTATGATTA+AGG | - | chr4_1:52670403-52670422 | Msa0554920:intron | 25.0% |
| !!! | GCTGTTTTAATAAGTTATCT+TGG | - | chr4_1:52670575-52670594 | Msa0554920:intron | 25.0% |
| !! | GATGTTTTCATAAGTTATCT+TGG | - | chr4_1:52670616-52670635 | Msa0554920:intron | 25.0% |
| !! | TTTTCATAAGTTATCTTGGA+GGG | - | chr4_1:52670620-52670639 | Msa0554920:intron | 25.0% |
| ! | TGGGAGAACTTATAAAAAAA+GGG | + | chr4_1:52670855-52670874 | None:intergenic | 25.0% |
| ! | TTGGGAGAACTTATAAAAAA+AGG | + | chr4_1:52670856-52670875 | None:intergenic | 25.0% |
| !! | TTTCAATAGTTTTCATGTAG+AGG | + | chr4_1:52671051-52671070 | None:intergenic | 25.0% |
| ! | TTGTAAGTAATTGTTGTGAT+TGG | - | chr4_1:52671208-52671227 | Msa0554920:intron | 25.0% |
| ! | GCCTAAAATATAGTAGATAA+AGG | + | chr4_1:52671448-52671467 | None:intergenic | 25.0% |
| ! | ATAACATAATTTAGTACGCA+CGG | + | chr4_1:52671662-52671681 | None:intergenic | 25.0% |
| ! | AATATTCAAAAGAAACAGTG+AGG | + | chr4_1:52671694-52671713 | None:intergenic | 25.0% |
| ! | CAAAAAAGTTATTGATATGG+TGG | - | chr4_1:52671806-52671825 | Msa0554920:intron | 25.0% |
| !! | TTTATCTTTTCAGATTGAAG+AGG | - | chr4_1:52671969-52671988 | Msa0554920:intron | 25.0% |
| ! | AGAATATGTTGAATTTGAAG+AGG | - | chr4_1:52672008-52672027 | Msa0554920:intron | 25.0% |
| !! | GAAGATGATATAGAAGATTT+TGG | - | chr4_1:52672030-52672049 | Msa0554920:intron | 25.0% |
| ! | AAATATTTCTTCACTCATCA+AGG | - | chr4_1:52672203-52672222 | Msa0554920:intron | 25.0% |
| ! | GAAAATAGTTATCCATACTA+TGG | - | chr4_1:52672551-52672570 | Msa0554920:CDS | 25.0% |
| !!! | AATCTTCTTTTTTGCTTGTT+CGG | + | chr4_1:52672914-52672933 | None:intergenic | 25.0% |
| !! | ATTTTCCAAAATCACTAACA+AGG | + | chr4_1:52673109-52673128 | None:intergenic | 25.0% |
| ! | TTAATCAAAGGAAAGCAAAA+AGG | - | chr4_1:52673217-52673236 | Msa0554920:intron | 25.0% |
| !! | TTTCTTTGATTTAGAATCAG+AGG | + | chr4_1:52673280-52673299 | None:intergenic | 25.0% |
| ! | AGTATAAAATTACCTCAATG+AGG | + | chr4_1:52673311-52673330 | None:intergenic | 25.0% |
| ! | CACAATAGCATTTAAAAGAA+CGG | + | chr4_1:52673354-52673373 | None:intergenic | 25.0% |
| ! | GTGTGTTTGACATAATTATT+TGG | + | chr4_1:52673704-52673723 | None:intergenic | 25.0% |
| !!! | ACACTTTTGTTGTAATATTG+CGG | - | chr4_1:52673720-52673739 | Msa0554920:intron | 25.0% |
| ! | AAAATCAAAATTGTGATGTC+AGG | + | chr4_1:52673956-52673975 | None:intergenic | 25.0% |
| !! | ATTTTGTGTTAGTTACTGAT+AGG | - | chr4_1:52674037-52674056 | Msa0554920:CDS | 25.0% |
| ! | AGAAACGACTAATCAAAATT+TGG | + | chr4_1:52674087-52674106 | None:intergenic | 25.0% |
| !! | ATTTTTATATTTGCCAACAC+TGG | + | chr4_1:52674207-52674226 | None:intergenic | 25.0% |
| !!! | GAGTTTTGTTTTGTTTTGTT+TGG | - | chr4_1:52674229-52674248 | Msa0554920:five_prime_UTR | 25.0% |
| !!! | TTGAGGTTTTAGGGTTTAAA+GGG | + | chr4_1:52669929-52669948 | None:intergenic | 30.0% |
| !!! | TTTGAGGTTTTAGGGTTTAA+AGG | + | chr4_1:52669930-52669949 | None:intergenic | 30.0% |
| !!! | CTTTCAGTTTTGAGGTTTTA+GGG | + | chr4_1:52669938-52669957 | None:intergenic | 30.0% |
| !!! | ACTTTCAGTTTTGAGGTTTT+AGG | + | chr4_1:52669939-52669958 | None:intergenic | 30.0% |
| ! | GGATTTTACTTTCAGTTTTG+AGG | + | chr4_1:52669946-52669965 | None:intergenic | 30.0% |
| ! | AAAAATACCGGTGGTAATTT+TGG | + | chr4_1:52670046-52670065 | None:intergenic | 30.0% |
| AGGGTTTCTACAAAAAATAC+CGG | + | chr4_1:52670058-52670077 | None:intergenic | 30.0% | |
| GTGGAAAAAACTGCATTATT+TGG | - | chr4_1:52670239-52670258 | Msa0554920:intron | 30.0% | |
| ATTATGATTAAGGCTCTGTT+TGG | - | chr4_1:52670413-52670432 | Msa0554920:intron | 30.0% | |
| ATTGCAGCTTATATATCATG+AGG | - | chr4_1:52670474-52670493 | Msa0554920:intron | 30.0% | |
| AAGTTATCTTGGAGAGTTTA+TGG | - | chr4_1:52670586-52670605 | Msa0554920:intron | 30.0% | |
| ! | GTTTTCATAAGTTATCTTGG+AGG | - | chr4_1:52670619-52670638 | Msa0554920:intron | 30.0% |
| !!! | TTACCCTGTTTTTTTTACAC+AGG | + | chr4_1:52670753-52670772 | None:intergenic | 30.0% |
| GGGAGAACTTATAAAAAAAG+GGG | + | chr4_1:52670854-52670873 | None:intergenic | 30.0% | |
| ! | TTGTATCGTATCCTTTTGAA+TGG | - | chr4_1:52670943-52670962 | Msa0554920:intron | 30.0% |
| ATCTTGTGTATAAGAAGCTT+GGG | + | chr4_1:52671273-52671292 | None:intergenic | 30.0% | |
| TATCTTGTGTATAAGAAGCT+TGG | + | chr4_1:52671274-52671293 | None:intergenic | 30.0% | |
| ! | GGAAACTTTCTTTGAAAACA+AGG | - | chr4_1:52671337-52671356 | Msa0554920:intron | 30.0% |
| !!! | TTGGTTGTTGTTGTTTTACA+GGG | - | chr4_1:52671527-52671546 | Msa0554920:intron | 30.0% |
| TAACATAATTTAGTACGCAC+GGG | + | chr4_1:52671661-52671680 | None:intergenic | 30.0% | |
| CTTTGAGCTGTAGTAAATAT+TGG | - | chr4_1:52672348-52672367 | Msa0554920:CDS | 30.0% | |
| ACAATGCAAATGATAGCAAA+TGG | - | chr4_1:52672525-52672544 | Msa0554920:CDS | 30.0% | |
| CAATGCAAATGATAGCAAAT+GGG | - | chr4_1:52672526-52672545 | Msa0554920:CDS | 30.0% | |
| !! | TTATCTTTTCCTTGTTTGGT+TGG | - | chr4_1:52672583-52672602 | Msa0554920:intron | 30.0% |
| !!! | TTTTTTTTCTCATGTCGTGA+TGG | - | chr4_1:52672657-52672676 | Msa0554920:intron | 30.0% |
| ATAAAATGGGCAGAAAGTAA+AGG | + | chr4_1:52673011-52673030 | None:intergenic | 30.0% | |
| CATTTGGATGCAAAAGATAA+TGG | + | chr4_1:52673040-52673059 | None:intergenic | 30.0% | |
| AGTGTTCTTCTCAAATGATA+AGG | + | chr4_1:52673084-52673103 | None:intergenic | 30.0% | |
| ! | AAACTGAAGCACTTAATCAA+AGG | - | chr4_1:52673205-52673224 | Msa0554920:intron | 30.0% |
| TTCTAAATCAAAGAAAGCGA+AGG | - | chr4_1:52673284-52673303 | Msa0554920:intron | 30.0% | |
| !! | TGATTTTCATTGTTTTCAGG+TGG | - | chr4_1:52673969-52673988 | Msa0554920:intron | 30.0% |
| !!! | CTTCAAATTAGTTTTTACCC+TGG | - | chr4_1:52674105-52674124 | Msa0554920:CDS | 30.0% |
| !!! | GTTTTAGGGTTTAAAGGGAA+TGG | + | chr4_1:52669924-52669943 | None:intergenic | 35.0% |
| AGGTTATATGGCAAGTTATC+AGG | - | chr4_1:52669998-52670017 | Msa0554920:three_prime_UTR | 35.0% | |
| GTTTCTACAAAAAATACCGG+TGG | + | chr4_1:52670055-52670074 | None:intergenic | 35.0% | |
| AAATTCCGGTGACATTGTAA+GGG | + | chr4_1:52670077-52670096 | None:intergenic | 35.0% | |
| TGAACTTCGGTTACAAATTC+CGG | + | chr4_1:52670091-52670110 | None:intergenic | 35.0% | |
| CATAGCGACTATTAGCTAAA+GGG | + | chr4_1:52670116-52670135 | None:intergenic | 35.0% | |
| !! | TAGACATTTGGTTCTTCATG+TGG | - | chr4_1:52670349-52670368 | Msa0554920:intron | 35.0% |
| !! | AGACATTTGGTTCTTCATGT+GGG | - | chr4_1:52670350-52670369 | Msa0554920:intron | 35.0% |
| ATGTGGGGTAGGTAATAATT+TGG | - | chr4_1:52670366-52670385 | Msa0554920:intron | 35.0% | |
| GTTGTTATCACATCACTGAA+AGG | - | chr4_1:52670699-52670718 | Msa0554920:intron | 35.0% | |
| CCTCCTGTGTAAAAAAAACA+GGG | - | chr4_1:52670747-52670766 | Msa0554920:intron | 35.0% | |
| TACAATACACCCAATATGGT+GGG | - | chr4_1:52670780-52670799 | Msa0554920:intron | 35.0% | |
| ! | GATTATTTGAGTTTGTCTGC+TGG | + | chr4_1:52670900-52670919 | None:intergenic | 35.0% |
| ! | CATTTAGGGTCTGTTTAGAT+AGG | + | chr4_1:52670922-52670941 | None:intergenic | 35.0% |
| CTATCTAAACAGACCCTAAA+TGG | - | chr4_1:52670920-52670939 | Msa0554920:CDS | 35.0% | |
| GGATACGATACAACCATTTA+GGG | + | chr4_1:52670936-52670955 | None:intergenic | 35.0% | |
| AGGATACGATACAACCATTT+AGG | + | chr4_1:52670937-52670956 | None:intergenic | 35.0% | |
| ACAATTGCATTGTGTGATGT+AGG | - | chr4_1:52671016-52671035 | Msa0554920:intron | 35.0% | |
| TGAAGTCATTGACAAACATC+TGG | - | chr4_1:52671135-52671154 | Msa0554920:intron | 35.0% | |
| ! | CTTTTATGGAGAAACTGCTA+TGG | + | chr4_1:52671490-52671509 | None:intergenic | 35.0% |
| TAGCAGTTTCTCCATAAAAG+TGG | - | chr4_1:52671490-52671509 | Msa0554920:intron | 35.0% | |
| AACAACCAACATGATCAATC+AGG | + | chr4_1:52671516-52671535 | None:intergenic | 35.0% | |
| !!! | GTTGGTTGTTGTTGTTTTAC+AGG | - | chr4_1:52671526-52671545 | Msa0554920:intron | 35.0% |
| ! | TCTCTCTTAACCTCTTTTCT+TGG | + | chr4_1:52671570-52671589 | None:intergenic | 35.0% |
| GTCTATTGAGAAAGAGCTAT+TGG | - | chr4_1:52671719-52671738 | Msa0554920:intron | 35.0% | |
| TGTTGAAGAAGAGGATGAAA+TGG | - | chr4_1:52671842-52671861 | Msa0554920:intron | 35.0% | |
| ATTGAAGAGGAAACAGAAAC+AGG | - | chr4_1:52671982-52672001 | Msa0554920:intron | 35.0% | |
| TAGAAGCTTTGCAATATGCA+TGG | - | chr4_1:52672116-52672135 | Msa0554920:CDS | 35.0% | |
| ! | GATTCTGGATTAGATATGCA+TGG | - | chr4_1:52672262-52672281 | Msa0554920:intron | 35.0% |
| !! | TTTTCCTTGTTTGGTTGGTT+GGG | - | chr4_1:52672588-52672607 | Msa0554920:intron | 35.0% |
| ! | AGGGAAATTTTGCTAATCAG+AGG | - | chr4_1:52672625-52672644 | Msa0554920:intron | 35.0% |
| ATAAGAATCAAAAGGATCCC+AGG | + | chr4_1:52672824-52672843 | None:intergenic | 35.0% | |
| !!! | TTCTTTTTTGCTTGTTCGGT+TGG | + | chr4_1:52672910-52672929 | None:intergenic | 35.0% |
| ! | ACTCTCCTTGTTAGTGATTT+TGG | - | chr4_1:52673101-52673120 | Msa0554920:intron | 35.0% |
| ATGGCATTTACTAATGCAGA+TGG | - | chr4_1:52673165-52673184 | Msa0554920:intron | 35.0% | |
| ! | GACTTTAGCTTCAAAGAAAC+TGG | - | chr4_1:52673245-52673264 | Msa0554920:intron | 35.0% |
| AGCTTCAAAGAAACTGGAAA+AGG | - | chr4_1:52673251-52673270 | Msa0554920:intron | 35.0% | |
| ! | AACAACTCAACCACTTCTTT+TGG | - | chr4_1:52673413-52673432 | Msa0554920:intron | 35.0% |
| ! | ACAACTCAACCACTTCTTTT+GGG | - | chr4_1:52673414-52673433 | Msa0554920:intron | 35.0% |
| !! | ACCACTTCTTTTGGGAATTT+TGG | - | chr4_1:52673422-52673441 | Msa0554920:intron | 35.0% |
| ACCAAAATTCCCAAAAGAAG+TGG | + | chr4_1:52673426-52673445 | None:intergenic | 35.0% | |
| TAAATGATGCTGCTACAAAC+TGG | - | chr4_1:52673518-52673537 | Msa0554920:intron | 35.0% | |
| TCTCGTGTTCGAAACAATTA+AGG | - | chr4_1:52673750-52673769 | Msa0554920:intron | 35.0% | |
| CTCGTGTTCGAAACAATTAA+GGG | - | chr4_1:52673751-52673770 | Msa0554920:intron | 35.0% | |
| ! | ATCAGATCTCTTTTGTTCCA+GGG | + | chr4_1:52674125-52674144 | None:intergenic | 35.0% |
| ! | AATCAGATCTCTTTTGTTCC+AGG | + | chr4_1:52674126-52674145 | None:intergenic | 35.0% |
| !! | GGTTTTGTATTACGTTCTTC+AGG | - | chr4_1:52674250-52674269 | Msa0554920:five_prime_UTR | 35.0% |
| ! | TTTTGGCCATGTAACTGCAA+TGG | + | chr4_1:52670029-52670048 | None:intergenic | 40.0% |
| TACATGGCCAAAATTACCAC+CGG | - | chr4_1:52670036-52670055 | Msa0554920:three_prime_UTR | 40.0% | |
| AGAAACCCTTACAATGTCAC+CGG | - | chr4_1:52670069-52670088 | Msa0554920:three_prime_UTR | 40.0% | |
| CAAATTCCGGTGACATTGTA+AGG | + | chr4_1:52670078-52670097 | None:intergenic | 40.0% | |
| ! | TAGCTAAAGGGCATGAACTT+CGG | + | chr4_1:52670104-52670123 | None:intergenic | 40.0% |
| GCATAGCGACTATTAGCTAA+AGG | + | chr4_1:52670117-52670136 | None:intergenic | 40.0% | |
| AGTACCATTGTCTTCACGAA+TGG | + | chr4_1:52670142-52670161 | None:intergenic | 40.0% | |
| TATGAAATTCTTGTGGGGTG+TGG | - | chr4_1:52670220-52670239 | Msa0554920:intron | 40.0% | |
| !! | GACATTTGGTTCTTCATGTG+GGG | - | chr4_1:52670351-52670370 | Msa0554920:intron | 40.0% |
| AAGTTATCTTGGAGGGCTTA+TGG | - | chr4_1:52670627-52670646 | Msa0554920:intron | 40.0% | |
| GCCTCCTGTGTAAAAAAAAC+AGG | - | chr4_1:52670746-52670765 | Msa0554920:intron | 40.0% | |
| !!! | CCCTGTTTTTTTTACACAGG+AGG | + | chr4_1:52670750-52670769 | None:intergenic | 40.0% |
| TGCGTACAATACACCCAATA+TGG | - | chr4_1:52670776-52670795 | Msa0554920:intron | 40.0% | |
| GTACAATACACCCAATATGG+TGG | - | chr4_1:52670779-52670798 | Msa0554920:intron | 40.0% | |
| TTATAAAAAAAGGGGCAGCC+CGG | + | chr4_1:52670846-52670865 | None:intergenic | 40.0% | |
| TCATACGCCAAAGGATTTGT+GGG | - | chr4_1:52671075-52671094 | Msa0554920:intron | 40.0% | |
| ACTCTTTCCCACAAATCCTT+TGG | + | chr4_1:52671085-52671104 | None:intergenic | 40.0% | |
| TACATCTGTCAGTGCAGTAA+AGG | + | chr4_1:52671246-52671265 | None:intergenic | 40.0% | |
| ! | TACTGCACTGACAGATGTAT+TGG | - | chr4_1:52671247-52671266 | Msa0554920:intron | 40.0% |
| TGACCAAAATGACTCAGATG+CGG | - | chr4_1:52671304-52671323 | Msa0554920:intron | 40.0% | |
| ! | TATCCGCATCTGAGTCATTT+TGG | + | chr4_1:52671310-52671329 | None:intergenic | 40.0% |
| !!! | GATCAATCAGGCCACTTTTA+TGG | + | chr4_1:52671504-52671523 | None:intergenic | 40.0% |
| AAAAGCAGCTGTGCTAGAAA+AGG | - | chr4_1:52671614-52671633 | Msa0554920:intron | 40.0% | |
| CTATTGGTACGCCTTCAAAA+CGG | - | chr4_1:52671735-52671754 | Msa0554920:intron | 40.0% | |
| ! | TCTGGTAAAGTCCGTTTTGA+AGG | + | chr4_1:52671749-52671768 | None:intergenic | 40.0% |
| ATCTCAAGCTGTTGAAGAAG+AGG | - | chr4_1:52671833-52671852 | Msa0554920:intron | 40.0% | |
| ! | ACTTGGTAATATGTTGAGCC+TGG | - | chr4_1:52671937-52671956 | Msa0554920:intron | 40.0% |
| ! | TTTTGCAATTCACGAGTCAC+AGG | - | chr4_1:52672056-52672075 | Msa0554920:CDS | 40.0% |
| TTTGCAATTCACGAGTCACA+GGG | - | chr4_1:52672057-52672076 | Msa0554920:CDS | 40.0% | |
| AATGGCAGCGATGATGAAAA+TGG | - | chr4_1:52672081-52672100 | Msa0554920:CDS | 40.0% | |
| GATATGACTGCAGTATCTAG+AGG | + | chr4_1:52672432-52672451 | None:intergenic | 40.0% | |
| !! | CTTTTCCTTGTTTGGTTGGT+TGG | - | chr4_1:52672587-52672606 | Msa0554920:intron | 40.0% |
| ! | TTGGTTGGTTGGGTAGAAAA+CGG | - | chr4_1:52672598-52672617 | Msa0554920:intron | 40.0% |
| ! | TTTTTCTCATGTCGTGATGG+AGG | - | chr4_1:52672660-52672679 | Msa0554920:intron | 40.0% |
| !! | TTTTCTCATGTCGTGATGGA+GGG | - | chr4_1:52672661-52672680 | Msa0554920:intron | 40.0% |
| ATGGAGGGACGAAATATCAA+GGG | - | chr4_1:52672676-52672695 | Msa0554920:intron | 40.0% | |
| AGTTGTCTCTTCACTTGAGA+GGG | + | chr4_1:52672735-52672754 | None:intergenic | 40.0% | |
| TAGTTGTCTCTTCACTTGAG+AGG | + | chr4_1:52672736-52672755 | None:intergenic | 40.0% | |
| CATCCAAATGAGACATATGC+TGG | - | chr4_1:52673050-52673069 | Msa0554920:CDS | 40.0% | |
| GTGACTGCTTGAGTTCTATA+TGG | - | chr4_1:52673828-52673847 | Msa0554920:intron | 40.0% | |
| AAGGGAATGGTTTCGATGCA+GGG | + | chr4_1:52669911-52669930 | None:intergenic | 45.0% | |
| AAAGGGAATGGTTTCGATGC+AGG | + | chr4_1:52669912-52669931 | None:intergenic | 45.0% | |
| TGCAGCACGATGAGGTTATA+TGG | - | chr4_1:52669986-52670005 | Msa0554920:three_prime_UTR | 45.0% | |
| GCACAACCATTGCAGTTACA+TGG | - | chr4_1:52670020-52670039 | Msa0554920:three_prime_UTR | 45.0% | |
| ACCATTGTCTTCACGAATGG+TGG | + | chr4_1:52670139-52670158 | None:intergenic | 45.0% | |
| !! | TTTGGTTCTTCATGTGGGGT+AGG | - | chr4_1:52670355-52670374 | Msa0554920:intron | 45.0% |
| TGTAAATTCTCCCAACGCCT+TGG | - | chr4_1:52670664-52670683 | Msa0554920:intron | 45.0% | |
| AAGGTCACACGTTCAAGTCT+TGG | - | chr4_1:52670718-52670737 | Msa0554920:intron | 45.0% | |
| ! | TGGCATAAGCACTTCTGAGA+CGG | + | chr4_1:52670880-52670899 | None:intergenic | 45.0% |
| TGAAAGAGCTCATACGCCAA+AGG | - | chr4_1:52671066-52671085 | Msa0554920:intron | 45.0% | |
| CTCATACGCCAAAGGATTTG+TGG | - | chr4_1:52671074-52671093 | Msa0554920:intron | 45.0% | |
| AGTGGCCTGATTGATCATGT+TGG | - | chr4_1:52671508-52671527 | Msa0554920:intron | 45.0% | |
| AACGACACTGCCAAGAAAAG+AGG | - | chr4_1:52671557-52671576 | Msa0554920:intron | 45.0% | |
| TAGTACGCACGGGTAACATT+CGG | + | chr4_1:52671651-52671670 | None:intergenic | 45.0% | |
| ! | CAAAACGGACTTTACCAGAC+AGG | - | chr4_1:52671750-52671769 | Msa0554920:intron | 45.0% |
| TGCATATATCACCTCCTGTC+TGG | + | chr4_1:52671767-52671786 | None:intergenic | 45.0% | |
| ATTCACGAGTCACAGGGAAA+TGG | - | chr4_1:52672063-52672082 | Msa0554920:CDS | 45.0% | |
| TCTACCCAACCAACCAAACA+AGG | + | chr4_1:52672595-52672614 | None:intergenic | 45.0% | |
| ! | TGGTTGGTTGGGTAGAAAAC+GGG | - | chr4_1:52672599-52672618 | Msa0554920:intron | 45.0% |
| TTGGGTAGAAAACGGGAGAA+GGG | - | chr4_1:52672606-52672625 | Msa0554920:intron | 45.0% | |
| GATGGAGGGACGAAATATCA+AGG | - | chr4_1:52672675-52672694 | Msa0554920:intron | 45.0% | |
| TGGAGGGACGAAATATCAAG+GGG | - | chr4_1:52672677-52672696 | Msa0554920:intron | 45.0% | |
| CAAGGGGGAGAAATAATGTG+AGG | - | chr4_1:52672693-52672712 | Msa0554920:intron | 45.0% | |
| CCTCCAGCATATGTCTCATT+TGG | + | chr4_1:52673056-52673075 | None:intergenic | 45.0% | |
| CCAAATGAGACATATGCTGG+AGG | - | chr4_1:52673053-52673072 | Msa0554920:CDS | 45.0% | |
| AATGAGACATATGCTGGAGG+CGG | - | chr4_1:52673056-52673075 | Msa0554920:CDS | 45.0% | |
| AGAACGGATCGCTTTATACG+AGG | + | chr4_1:52673338-52673357 | None:intergenic | 45.0% | |
| AGGTCAGCATGCAAAAATGG+AGG | + | chr4_1:52673630-52673649 | None:intergenic | 45.0% | |
| GTGAGGTCAGCATGCAAAAA+TGG | + | chr4_1:52673633-52673652 | None:intergenic | 45.0% | |
| !! | AAGTCGTAGGTAGCTTTGTG+AGG | + | chr4_1:52673650-52673669 | None:intergenic | 45.0% |
| GCAAGACAAAGAGAAGTCGT+AGG | + | chr4_1:52673663-52673682 | None:intergenic | 45.0% | |
| CGACTTCTCTTTGTCTTGCT+TGG | - | chr4_1:52673664-52673683 | Msa0554920:intron | 45.0% | |
| GTTTGAAAGGAAGCCAGTGT+TGG | - | chr4_1:52674191-52674210 | Msa0554920:five_prime_UTR | 45.0% | |
| CACAAAGATGCAGCACGATG+AGG | - | chr4_1:52669978-52669997 | Msa0554920:three_prime_UTR | 50.0% | |
| GCCACCATTCGTGAAGACAA+TGG | - | chr4_1:52670135-52670154 | Msa0554920:intron | 50.0% | |
| ACAACTTTCCCGTTACGCCA+AGG | + | chr4_1:52670684-52670703 | None:intergenic | 50.0% | |
| AGAAGGGGTCCCACCATATT+GGG | + | chr4_1:52670792-52670811 | None:intergenic | 50.0% | |
| ! | AATATGGTGGGACCCCTTCT+CGG | - | chr4_1:52670792-52670811 | Msa0554920:intron | 50.0% |
| !! | AAGCACTTCTGAGACGGGTT+GGG | + | chr4_1:52670874-52670893 | None:intergenic | 50.0% |
| !! | TAAGCACTTCTGAGACGGGT+TGG | + | chr4_1:52670875-52670894 | None:intergenic | 50.0% |
| !! | GGCATAAGCACTTCTGAGAC+GGG | + | chr4_1:52670879-52670898 | None:intergenic | 50.0% |
| GGGAAAGAGTTAAGCTGCCT+AGG | - | chr4_1:52671095-52671114 | Msa0554920:intron | 50.0% | |
| AGTGCCTGCTGGTAATTCCT+AGG | + | chr4_1:52671115-52671134 | None:intergenic | 50.0% | |
| CAATGACTTCAAGTGCCTGC+TGG | + | chr4_1:52671126-52671145 | None:intergenic | 50.0% | |
| CTGTCAGTGCAGTAAAGGTC+AGG | + | chr4_1:52671241-52671260 | None:intergenic | 50.0% | |
| CTCAGATGCGGATACGTATG+AGG | - | chr4_1:52671316-52671335 | Msa0554920:intron | 50.0% | |
| ! | AACGGACTTTACCAGACAGG+AGG | - | chr4_1:52671753-52671772 | Msa0554920:intron | 50.0% |
| GTTGGGTAGAAAACGGGAGA+AGG | - | chr4_1:52672605-52672624 | Msa0554920:intron | 50.0% | |
| GGAGGGACGAAATATCAAGG+GGG | - | chr4_1:52672678-52672697 | Msa0554920:intron | 50.0% | |
| TTTACCTCGCTCATCTAGCC+TGG | - | chr4_1:52672803-52672822 | Msa0554920:CDS | 50.0% | |
| TTACCTCGCTCATCTAGCCT+GGG | - | chr4_1:52672804-52672823 | Msa0554920:CDS | 50.0% | |
| ATGAGACATATGCTGGAGGC+GGG | - | chr4_1:52673057-52673076 | Msa0554920:CDS | 50.0% | |
| GAAAGCGAAGGTCCTCATTG+AGG | - | chr4_1:52673296-52673315 | Msa0554920:intron | 50.0% | |
| AACACGACGATGCTGTCGAA+AGG | - | chr4_1:52673992-52674011 | Msa0554920:CDS | 50.0% | |
| TGCTGTCGAAAGGCAAAGAG+CGG | - | chr4_1:52674002-52674021 | Msa0554920:CDS | 50.0% | |
| GAGAAGGGGTCCCACCATAT+TGG | + | chr4_1:52670793-52670812 | None:intergenic | 55.0% | |
| ! | ACGCAGGAGCTTTAGTGCAC+CGG | - | chr4_1:52670824-52670843 | Msa0554920:CDS | 55.0% |
| GCTGCCTAGGAATTACCAGC+AGG | - | chr4_1:52671108-52671127 | Msa0554920:intron | 55.0% | |
| CTCCCAACGCCTTGGCGTAA+CGG | - | chr4_1:52670672-52670691 | Msa0554920:intron | 60.0% | |
| TCCCAACGCCTTGGCGTAAC+GGG | - | chr4_1:52670673-52670692 | Msa0554920:intron | 60.0% | |
| ! | TCCCGTTACGCCAAGGCGTT+GGG | + | chr4_1:52670677-52670696 | None:intergenic | 60.0% |
| TTCCCGTTACGCCAAGGCGT+TGG | + | chr4_1:52670678-52670697 | None:intergenic | 60.0% | |
| CGTGTGCAGAGTCCGAGAAG+GGG | + | chr4_1:52670807-52670826 | None:intergenic | 60.0% | |
| GCGTGTGCAGAGTCCGAGAA+GGG | + | chr4_1:52670808-52670827 | None:intergenic | 60.0% | |
| TGCGTGTGCAGAGTCCGAGA+AGG | + | chr4_1:52670809-52670828 | None:intergenic | 60.0% | |
| TTCTCGGACTCTGCACACGC+AGG | - | chr4_1:52670808-52670827 | Msa0554920:intron | 60.0% | |
| ! | CGCAGGAGCTTTAGTGCACC+GGG | - | chr4_1:52670825-52670844 | Msa0554920:CDS | 60.0% |
| GATCCCAGGCTAGATGAGCG+AGG | + | chr4_1:52672810-52672829 | None:intergenic | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4_1 | gene | 52669863 | 52674273 | 52669863 | ID=Msa0554920;Name=Msa0554920 |
| chr4_1 | mRNA | 52669863 | 52674273 | 52669863 | ID=Msa0554920-mRNA-1;Parent=Msa0554920;Name=Msa0554920-mRNA-1;_AED=0.05;_eAED=0.05;_QI=122|1|1|1|1|1|8|241|306 |
| chr4_1 | exon | 52669863 | 52670148 | 52669863 | ID=Msa0554920-mRNA-1:exon:15239;Parent=Msa0554920-mRNA-1 |
| chr4_1 | exon | 52670819 | 52670952 | 52670819 | ID=Msa0554920-mRNA-1:exon:15238;Parent=Msa0554920-mRNA-1 |
| chr4_1 | exon | 52672034 | 52672154 | 52672034 | ID=Msa0554920-mRNA-1:exon:15237;Parent=Msa0554920-mRNA-1 |
| chr4_1 | exon | 52672273 | 52672416 | 52672273 | ID=Msa0554920-mRNA-1:exon:15236;Parent=Msa0554920-mRNA-1 |
| chr4_1 | exon | 52672501 | 52672588 | 52672501 | ID=Msa0554920-mRNA-1:exon:15235;Parent=Msa0554920-mRNA-1 |
| chr4_1 | exon | 52672778 | 52672875 | 52672778 | ID=Msa0554920-mRNA-1:exon:15234;Parent=Msa0554920-mRNA-1 |
| chr4_1 | exon | 52672980 | 52673098 | 52672980 | ID=Msa0554920-mRNA-1:exon:15233;Parent=Msa0554920-mRNA-1 |
| chr4_1 | exon | 52673980 | 52674273 | 52673980 | ID=Msa0554920-mRNA-1:exon:15232;Parent=Msa0554920-mRNA-1 |
| chr4_1 | five_prime_UTR | 52674152 | 52674273 | 52674152 | ID=Msa0554920-mRNA-1:five_prime_utr;Parent=Msa0554920-mRNA-1 |
| chr4_1 | CDS | 52673980 | 52674151 | 52673980 | ID=Msa0554920-mRNA-1:cds;Parent=Msa0554920-mRNA-1 |
| chr4_1 | CDS | 52672980 | 52673098 | 52672980 | ID=Msa0554920-mRNA-1:cds;Parent=Msa0554920-mRNA-1 |
| chr4_1 | CDS | 52672778 | 52672875 | 52672778 | ID=Msa0554920-mRNA-1:cds;Parent=Msa0554920-mRNA-1 |
| chr4_1 | CDS | 52672501 | 52672588 | 52672501 | ID=Msa0554920-mRNA-1:cds;Parent=Msa0554920-mRNA-1 |
| chr4_1 | CDS | 52672273 | 52672416 | 52672273 | ID=Msa0554920-mRNA-1:cds;Parent=Msa0554920-mRNA-1 |
| chr4_1 | CDS | 52672034 | 52672154 | 52672034 | ID=Msa0554920-mRNA-1:cds;Parent=Msa0554920-mRNA-1 |
| chr4_1 | CDS | 52670819 | 52670952 | 52670819 | ID=Msa0554920-mRNA-1:cds;Parent=Msa0554920-mRNA-1 |
| chr4_1 | CDS | 52670104 | 52670148 | 52670104 | ID=Msa0554920-mRNA-1:cds;Parent=Msa0554920-mRNA-1 |
| chr4_1 | three_prime_UTR | 52669863 | 52670103 | 52669863 | ID=Msa0554920-mRNA-1:three_prime_utr;Parent=Msa0554920-mRNA-1 |
| Gene Sequence |
| Protein sequence |
