AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0493410

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0493410 MtrunA17_Chr3g0086861 79.856 417 55 7 1 410 1 395 0.0 521
Msa0493410 MtrunA17_Chr3g0086861 75.180 278 26 6 264 508 168 435 1.30e-90 285
Msa0493410 MtrunA17_Chr4g0061451 72.000 125 33 1 1 125 1 123 2.28e-61 203
Msa0493410 MtrunA17_Chr7g0219021 60.156 128 47 2 1 128 1 124 2.78e-46 162
Msa0493410 MtrunA17_Chr7g0219031 58.182 110 42 2 1 110 1 106 1.83e-32 120
Msa0493410 MtrunA17_Chr3g0119311 52.439 82 39 0 45 126 37 118 2.98e-22 92.8
Msa0493410 MtrunA17_Chr3g0121631 40.719 167 78 3 1 167 1 146 3.68e-22 92.8
Msa0493410 MtrunA17_Chr4g0035001 52.703 74 35 0 45 118 7 80 7.38e-21 89.7
Msa0493410 MtrunA17_Chr4g0035051 49.351 77 39 0 45 121 9 85 2.82e-20 86.7
Msa0493410 MtrunA17_Chr7g0266751 46.154 91 49 0 45 135 33 123 5.69e-20 86.7
Msa0493410 MtrunA17_Chr3g0116631 45.349 86 47 0 42 127 204 289 7.11e-20 90.1
Msa0493410 MtrunA17_Chr3g0116631 44.706 85 45 1 43 127 108 190 4.04e-12 67.0
Msa0493410 MtrunA17_Chr7g0263001 38.889 126 67 2 1 125 1 117 5.19e-19 84.0
Msa0493410 MtrunA17_Chr2g0278661 40.476 84 50 0 38 121 1 84 6.11e-19 86.7
Msa0493410 MtrunA17_Chr4g0031091 40.000 90 54 0 33 122 22 111 6.79e-19 82.4
Msa0493410 MtrunA17_Chr4g0058151 51.220 82 40 0 47 128 219 300 1.01e-18 87.0
Msa0493410 MtrunA17_Chr4g0058151 42.857 84 46 1 43 126 121 202 1.38e-12 68.6
Msa0493410 MtrunA17_Chr1g0210241 40.698 86 51 0 38 123 1 86 2.63e-18 85.5
Msa0493410 MtrunA17_Chr1g0181111 45.349 86 47 0 43 128 195 280 3.76e-18 85.1
Msa0493410 MtrunA17_Chr4g0042161 44.578 83 46 0 42 124 49 131 3.97e-18 81.3
Msa0493410 MtrunA17_Chr3g0088511 40.196 102 57 2 19 118 7 106 6.22e-16 74.7
Msa0493410 MtrunA17_Chr6g0481071 41.250 80 47 0 44 123 95 174 7.66e-16 75.9
Msa0493410 MtrunA17_Chr3g0144311 36.478 159 81 7 32 176 16 168 3.35e-15 76.3
Msa0493410 MtrunA17_Chr3g0101061 38.017 121 71 2 3 123 1 117 4.40e-15 78.2
Msa0493410 MtrunA17_Chr5g0447761 44.304 79 42 1 45 123 7 83 2.48e-14 75.5
Msa0493410 MtrunA17_Chr4g0017401 38.824 85 49 2 38 121 10 92 5.95e-14 72.4
Msa0493410 MtrunA17_Chr7g0276531 42.169 83 47 1 38 120 12 93 6.38e-14 72.0
Msa0493410 MtrunA17_Chr3g0127751 39.326 89 49 2 44 130 26 111 9.96e-14 71.2
Msa0493410 MtrunA17_Chr4g0042151 41.379 87 49 1 39 125 39 123 1.14e-13 69.7
Msa0493410 MtrunA17_Chr2g0327921 42.500 80 46 0 44 123 7 86 1.16e-13 66.6
Msa0493410 MtrunA17_Chr3g0110211 40.506 79 46 1 46 123 114 192 1.98e-13 72.0
Msa0493410 MtrunA17_Chr1g0168601 41.463 82 46 1 42 121 149 230 2.69e-13 69.7
Msa0493410 MtrunA17_Chr8g0346011 40.230 87 43 2 38 120 31 112 2.83e-13 70.9
Msa0493410 MtrunA17_Chr5g0419351 36.957 92 57 1 40 130 6 97 4.21e-13 67.8
Msa0493410 MtrunA17_Chr1g0198431 37.500 80 50 0 45 124 193 272 4.56e-13 70.1
Msa0493410 MtrunA17_Chr3g0135111 45.570 79 41 1 45 123 11 87 7.95e-13 70.1
Msa0493410 MtrunA17_Chr4g0050441 43.421 76 43 0 46 121 18 93 1.01e-12 68.9
Msa0493410 MtrunA17_Chr5g0429941 43.421 76 43 0 46 121 18 93 1.48e-12 68.2
Msa0493410 MtrunA17_Chr1g0186351 36.986 73 43 1 45 114 7 79 2.70e-12 68.9
Msa0493410 MtrunA17_Chr1g0186351 39.474 76 45 1 45 120 113 187 8.20e-11 64.3
Msa0493410 MtrunA17_Chr7g0267571 32.090 134 82 3 45 178 110 234 2.90e-12 67.8
Msa0493410 MtrunA17_Chr5g0426311 40.476 84 49 1 38 121 10 92 5.41e-12 66.6
Msa0493410 MtrunA17_Chr8g0344491 40.260 77 46 0 46 122 149 225 5.51e-12 67.8
Msa0493410 MtrunA17_Chr4g0070231 41.558 77 45 0 46 122 133 209 5.80e-12 67.8
Msa0493410 MtrunA17_Chr1g0201001 39.535 86 49 1 38 120 20 105 7.60e-12 68.2
Msa0493410 MtrunA17_Chr7g0268551 38.095 84 52 0 39 122 343 426 9.92e-12 67.0
Msa0493410 MtrunA17_Chr3g0139111 38.961 77 47 0 46 122 147 223 3.14e-11 65.5
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0493410 AT5G61030.2 56.452 124 50 2 1 124 1 120 1.17e-44 160
Msa0493410 AT5G61030.1 56.452 124 50 2 1 124 1 120 1.17e-44 160
Msa0493410 AT1G74230.1 54.098 122 45 3 1 122 1 111 6.01e-36 136
Msa0493410 AT4G13850.4 45.736 129 51 3 1 124 1 115 3.19e-27 107
Msa0493410 AT4G13850.3 45.736 129 51 3 1 124 1 115 4.26e-27 107
Msa0493410 AT4G13850.2 45.736 129 51 3 1 124 1 115 5.49e-27 107
Msa0493410 AT4G13850.1 45.736 129 51 3 1 124 1 115 6.31e-27 107
Msa0493410 AT3G23830.2 50.562 89 41 1 43 128 34 122 7.77e-25 100
Msa0493410 AT3G23830.1 50.562 89 41 1 43 128 34 122 7.77e-25 100
Msa0493410 AT5G06210.1 48.454 97 42 1 44 140 34 122 3.37e-23 96.3
Msa0493410 AT4G24770.1 51.807 83 40 0 42 124 242 324 1.67e-21 96.3
Msa0493410 AT4G24770.1 46.341 82 42 1 45 126 151 230 1.04e-13 72.8
Msa0493410 AT4G24770.2 51.807 83 40 0 42 124 242 324 1.67e-21 96.3
Msa0493410 AT4G24770.2 46.341 82 42 1 45 126 151 230 1.04e-13 72.8
Msa0493410 AT1G18630.1 48.148 81 41 1 38 118 31 110 6.96e-20 87.0
Msa0493410 AT3G08000.1 53.012 83 39 0 45 127 42 124 7.72e-20 86.7
Msa0493410 AT2G37220.1 48.750 80 41 0 45 124 205 284 5.69e-19 87.8
Msa0493410 AT2G37220.1 38.053 113 59 3 12 118 58 165 5.21e-12 67.4
Msa0493410 AT5G50250.1 50.617 81 40 0 45 125 208 288 5.80e-19 87.8
Msa0493410 AT5G50250.1 45.783 83 43 1 45 127 114 194 1.42e-14 75.1
Msa0493410 AT3G26420.1 38.095 84 52 0 38 121 1 84 1.23e-17 83.2
Msa0493410 AT2G21660.2 50.000 82 41 0 39 120 3 84 2.43e-17 80.1
Msa0493410 AT2G21660.1 50.000 82 41 0 39 120 3 84 3.65e-17 80.1
Msa0493410 AT3G53460.1 47.059 85 44 1 45 128 258 342 3.71e-17 83.6
Msa0493410 AT3G53460.3 47.059 85 44 1 45 128 258 342 3.71e-17 83.6
Msa0493410 AT3G53460.2 47.059 85 44 1 45 128 258 342 3.71e-17 83.6
Msa0493410 AT2G37510.1 51.471 68 33 0 45 112 35 102 4.18e-17 78.6
Msa0493410 AT3G53460.4 47.059 85 44 1 45 128 279 363 6.26e-17 83.2
Msa0493410 AT5G59865.1 40.000 95 56 1 30 123 11 105 1.65e-16 76.3
Msa0493410 AT4G13860.1 48.684 76 39 0 44 119 3 78 2.30e-16 74.7
Msa0493410 AT3G54770.3 42.353 85 48 1 37 121 10 93 2.83e-16 79.3
Msa0493410 AT2G27330.1 46.154 78 42 0 38 115 15 92 3.14e-16 75.5
Msa0493410 AT3G54770.1 42.353 85 48 1 37 121 10 93 3.41e-16 79.3
Msa0493410 AT5G47320.1 48.148 81 42 0 44 124 31 111 3.73e-16 78.2
Msa0493410 AT1G73530.1 40.206 97 51 1 42 131 75 171 6.26e-16 76.6
Msa0493410 AT4G39260.1 44.737 76 42 0 45 120 7 82 6.68e-16 76.3
Msa0493410 AT5G04280.1 38.614 101 60 1 44 144 7 105 7.01e-16 79.3
Msa0493410 AT3G46020.1 41.573 89 50 1 43 129 6 94 1.71e-15 72.8
Msa0493410 AT1G76460.1 41.935 93 52 2 38 129 18 109 2.57e-15 77.0
Msa0493410 AT4G39260.3 44.578 83 46 0 45 127 7 89 4.91e-15 71.2
Msa0493410 AT2G21690.1 43.662 71 40 0 47 117 10 80 9.30e-15 71.2
Msa0493410 AT1G22330.1 40.678 118 62 5 38 151 11 124 2.14e-14 74.3
Msa0493410 AT3G07810.1 43.210 81 44 1 43 123 5 83 2.30e-14 76.3
Msa0493410 AT3G07810.2 43.210 81 44 1 43 123 5 83 2.41e-14 76.3
Msa0493410 AT5G54580.1 44.048 84 45 1 42 125 54 135 2.91e-14 70.9
Msa0493410 AT2G46780.1 37.778 90 52 2 39 125 17 105 3.66e-14 74.3
Msa0493410 AT2G46780.2 37.778 90 52 2 39 125 17 105 3.66e-14 74.3
Msa0493410 AT5G55550.5 45.570 79 41 1 45 123 7 83 3.75e-14 75.1
Msa0493410 AT5G55550.4 45.570 79 41 1 45 123 7 83 3.75e-14 75.1
Msa0493410 AT5G55550.9 45.570 79 41 1 45 123 7 83 3.75e-14 75.1
Msa0493410 AT5G55550.7 45.570 79 41 1 45 123 7 83 3.75e-14 75.1
Msa0493410 AT5G55550.1 45.570 79 41 1 45 123 7 83 3.75e-14 75.1
Msa0493410 AT1G22910.2 40.506 79 44 2 44 121 13 89 3.83e-14 72.8
Msa0493410 AT5G55550.2 47.887 71 35 1 45 115 7 75 4.37e-14 75.1
Msa0493410 AT5G55550.3 47.887 71 35 1 45 115 7 75 4.37e-14 75.1
Msa0493410 AT5G55550.6 47.887 71 35 1 45 115 7 75 4.37e-14 75.1
Msa0493410 AT5G55550.11 47.887 71 35 1 45 115 7 75 4.37e-14 75.1
Msa0493410 AT1G22910.1 40.506 79 44 2 44 121 13 89 4.56e-14 72.8
Msa0493410 AT1G60000.1 45.122 82 43 1 42 121 173 254 6.41e-14 72.4
Msa0493410 AT1G60000.1 29.032 124 87 1 43 166 84 206 8.69e-11 63.2
Msa0493410 AT5G55550.8 47.887 71 35 1 45 115 7 75 6.96e-14 74.7
Msa0493410 AT1G20880.2 42.353 85 46 2 38 121 18 100 7.15e-14 72.8
Msa0493410 AT1G20880.3 42.353 85 46 2 38 121 18 100 7.15e-14 72.8
Msa0493410 AT1G20880.1 42.353 85 46 2 38 121 18 100 7.15e-14 72.8
Msa0493410 AT5G55550.10 47.887 71 35 1 45 115 7 75 7.45e-14 74.7
Msa0493410 AT4G13860.2 53.333 60 28 0 60 119 2 61 2.00e-13 65.9
Msa0493410 AT4G26650.1 43.038 79 43 1 45 123 16 92 2.11e-13 72.8
Msa0493410 AT4G26650.2 43.038 79 43 1 45 123 13 89 2.19e-13 72.8
Msa0493410 AT3G52380.1 44.578 83 45 1 45 127 117 198 2.19e-13 72.0
Msa0493410 AT1G60650.2 37.975 79 49 0 43 121 11 89 2.41e-13 71.2
Msa0493410 AT1G60650.1 37.975 79 49 0 43 121 11 89 2.41e-13 71.2
Msa0493410 AT5G47620.1 41.333 75 41 1 43 114 5 79 3.89e-13 72.0
Msa0493410 AT5G47620.2 41.333 75 41 1 43 114 5 79 3.89e-13 72.0
Msa0493410 AT5G47620.5 41.333 75 41 1 43 114 5 79 3.89e-13 72.0
Msa0493410 AT1G22910.3 40.244 82 46 2 41 121 10 89 4.01e-13 71.2
Msa0493410 AT5G47620.4 45.070 71 36 1 43 110 5 75 7.18e-13 71.2
Msa0493410 AT1G33470.1 31.138 167 89 6 44 192 7 165 9.59e-13 68.6
Msa0493410 AT1G33470.3 31.138 167 89 6 44 192 7 165 9.83e-13 68.6
Msa0493410 AT1G33470.2 41.026 78 43 2 44 120 7 82 1.02e-12 68.6
Msa0493410 AT3G20930.1 37.500 80 50 0 45 124 283 362 1.66e-12 69.7
Msa0493410 AT2G33410.1 40.506 79 45 1 45 123 7 83 2.77e-12 69.3
Msa0493410 AT5G64200.2 42.105 76 44 0 46 121 18 93 4.12e-12 67.8
Msa0493410 AT5G64200.1 42.105 76 44 0 46 121 18 93 4.12e-12 67.8
Msa0493410 AT2G37510.2 37.634 93 33 1 45 112 35 127 5.95e-12 64.7
Msa0493410 AT1G13690.1 37.209 86 53 1 46 130 15 100 1.30e-11 63.9
Msa0493410 AT1G07350.3 36.842 76 48 0 42 117 43 118 1.33e-11 62.8
Msa0493410 AT1G07350.2 36.842 76 48 0 42 117 43 118 1.33e-11 62.8
Msa0493410 AT4G39260.4 41.429 70 41 0 45 114 7 76 1.36e-11 62.0
Msa0493410 AT5G11412.1 38.356 73 41 1 41 109 49 121 1.60e-11 63.5
Msa0493410 AT1G78260.1 38.462 78 47 1 44 121 17 93 1.69e-11 65.9
Msa0493410 AT3G14100.1 36.364 77 49 0 46 122 146 222 1.81e-11 66.6
Msa0493410 AT5G19030.1 32.759 116 61 2 30 128 52 167 2.04e-11 63.2
Msa0493410 AT1G07350.5 36.842 76 48 0 42 117 73 148 2.62e-11 62.8
Msa0493410 AT5G59860.1 31.776 107 68 1 16 122 43 144 2.69e-11 62.4
Msa0493410 AT2G18510.1 37.975 79 48 1 46 123 114 192 2.85e-11 65.9
Msa0493410 AT1G54080.1 36.364 77 49 0 46 122 150 226 3.13e-11 65.9
Msa0493410 AT1G17370.2 37.662 77 48 0 46 122 141 217 3.63e-11 65.9
Msa0493410 AT1G17370.1 37.662 77 48 0 46 122 141 217 3.81e-11 65.9
Msa0493410 AT1G78260.2 38.095 84 51 1 38 121 11 93 6.46e-11 63.5
Msa0493410 AT5G51300.1 38.462 78 48 0 43 120 479 556 9.72e-11 65.1
Msa0493410 AT5G51300.2 38.462 78 48 0 43 120 479 556 9.72e-11 65.1
Msa0493410 AT5G51300.3 38.462 78 48 0 43 120 479 556 9.72e-11 65.1

Find 204 sgRNAs with CRISPR-Local

Find 345 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GCTTTCTCCACCACTATAAT+TGG 0.184541 3_4:-18413738 None:intergenic
GTAGAGTTGGGAGTTTATTA+AGG 0.262081 3_4:+18410677 Msa0493410:CDS
GCTCCTGGTGTTGGTGGTTA+TGG 0.282819 3_4:+18413515 Msa0493410:CDS
CTATACCCTGTTGCACTTCC+AGG 0.289310 3_4:-18413896 None:intergenic
CCTCCTGGTGTTGGTGGTTA+TGG 0.295984 3_4:+18413011 Msa0493410:CDS
CCTCCTGGTGTTGGTGGTTA+TGG 0.295984 3_4:+18413098 Msa0493410:CDS
CCTCCTGGTGTTGGTGGTTA+TGG 0.295984 3_4:+18413272 Msa0493410:CDS
GGAGGTGGTGGTGGATATCT+AGG 0.305305 3_4:+18412789 Msa0493410:CDS
GGTTATGGCGGAGGTGGTTA+TGG 0.310693 3_4:+18412882 Msa0493410:CDS
GCTCCTGGTGTTGGTGGTTA+TGG 0.311859 3_4:+18413782 Msa0493410:CDS
GCACCTGGTGTTGGTGGTTA+TGG 0.314342 3_4:+18413701 Msa0493410:CDS
CACTTCCAGGGTATTGATTA+CGG 0.314514 3_4:-18413883 None:intergenic
TATGGTGCTGCTGCTGGATT+TGG 0.314919 3_4:+18413800 Msa0493410:CDS
GCTCCTAGTGTTGGTGGTTA+TGG 0.328099 3_4:+18413359 Msa0493410:CDS
GCTCCTGTTGCTGGTGTTTA+CGG 0.332135 3_4:+18413608 Msa0493410:CDS
GCTCCTAGTGTTGGTGGTTA+TGG 0.335313 3_4:+18413185 Msa0493410:CDS
GTTACAGTAATGGCTTTCTT+TGG 0.352828 3_4:+18410655 Msa0493410:exon
GCTCCCGGGAGCAGCTTTGC+TGG 0.358288 3_4:+18413932 Msa0493410:CDS
GGTGGATATCTAGGTGGTTA+TGG 0.359170 3_4:+18412798 Msa0493410:CDS
ACCACCACGGGGTCTTTCAT+TGG 0.359285 3_4:-18412745 None:intergenic
GGAGGCATCAAGTGCCATTC+AGG 0.360417 3_4:+18411521 Msa0493410:CDS
CAACACCACCGGTACTATAA+TGG 0.362745 3_4:-18413835 None:intergenic
CAATACCCTGGAAGTGCAAC+AGG 0.364374 3_4:+18413890 Msa0493410:CDS
ACTGGTAGGTCCAAAGGATT+TGG 0.367522 3_4:+18411474 Msa0493410:CDS
TACGGTAGTGCTCCTGTTGC+TGG 0.368507 3_4:+18413599 Msa0493410:CDS
GGTGGTTATGGTGCTGCTGC+TGG 0.370957 3_4:+18413794 Msa0493410:CDS
GCTCCTGGCGTTGGTGGTTA+TGG 0.373050 3_4:+18413446 Msa0493410:CDS
TCCTACAAACAGCTTGGTAT+TGG 0.375210 3_4:-18410788 None:intergenic
TATGGAAACAATGCAAATTA+TGG 0.382926 3_4:+18413029 Msa0493410:CDS
TATGGAAACAATGCAAATTA+TGG 0.382926 3_4:+18413116 Msa0493410:CDS
TATGGAAACAATGCAAATTA+TGG 0.382926 3_4:+18413203 Msa0493410:CDS
TATGGAAACAATGCAAATTA+TGG 0.382926 3_4:+18413290 Msa0493410:CDS
TATGGAAACAATGCAAATTA+TGG 0.382926 3_4:+18413377 Msa0493410:CDS
TGGCTTTCTTTGGTAGAGTT+GGG 0.383300 3_4:+18410665 Msa0493410:CDS
GAAAGCAATGCTGTTAAATA+TGG 0.383789 3_4:+18413332 Msa0493410:CDS
CCTTATGGTGGTGGAGGTGG+TGG 0.387616 3_4:+18412777 Msa0493410:CDS
CCAAGCCATACAGTGCTTCT+CGG 0.390473 3_4:+18410759 Msa0493410:CDS
TATGGTGGTGGAGGTGGTGG+TGG 0.394686 3_4:+18412780 Msa0493410:CDS
GAAAGCAATTCTGTTAACTA+TGG 0.398237 3_4:+18413674 Msa0493410:CDS
ATAATTATGGATCGCGAAAC+TGG 0.398913 3_4:+18411456 Msa0493410:CDS
CCTACAAACAGCTTGGTATT+GGG 0.403404 3_4:-18410787 None:intergenic
GGACCTTATGGTGGTGGAGG+TGG 0.405984 3_4:+18412774 Msa0493410:CDS
ATCAAGTGCCATTCAGGCCT+TGG 0.407278 3_4:+18411527 Msa0493410:CDS
ACTTCCAGGGTATTGATTAC+GGG 0.413785 3_4:-18413882 None:intergenic
GGTGCTAACAATGCAAATTA+TGG 0.418800 3_4:+18413632 Msa0493410:CDS
GGTGGAAACGATGCAAATTA+TGG 0.422269 3_4:+18412942 Msa0493410:CDS
TATGATAGAACTGGAGGACT+TGG 0.426268 3_4:+18413959 Msa0493410:CDS
ATGGCTTTCTTTGGTAGAGT+TGG 0.429889 3_4:+18410664 Msa0493410:CDS
AGTAACAAAGCCAAATCCTT+TGG 0.430233 3_4:-18411484 None:intergenic
AGCTAAGAACAACAAATTCA+AGG 0.432335 3_4:+18409759 Msa0493410:five_prime_UTR
GAAAGCAATTCTGTTAACTA+TGG 0.434507 3_4:+18413755 Msa0493410:CDS
GGAACTACCAGTGGTGGTTA+TGG 0.436521 3_4:+18412921 Msa0493410:CDS
ATAGTACCGGTGGTGTTGGT+GGG 0.437403 3_4:+18413840 Msa0493410:CDS
CCCAATACCAAGCTGTTTGT+AGG 0.444353 3_4:+18410787 Msa0493410:CDS
TTTGATGGACCTTATGGTGG+TGG 0.444397 3_4:+18412768 Msa0493410:CDS
CCACCGTAAACACCAGCAAC+AGG 0.447301 3_4:-18413611 None:intergenic
TATAGTACCGGTGGTGTTGG+TGG 0.447497 3_4:+18413839 Msa0493410:CDS
GGTAATGCTGCGGGCTATAG+TGG 0.448750 3_4:+18412846 Msa0493410:CDS
CTGTCCATCCAAGGCCTGAA+TGG 0.451832 3_4:-18411535 None:intergenic
GGTGGTAACAGTGCAAATTA+TGG 0.457360 3_4:+18413539 Msa0493410:CDS
GGTAATGCTGCTGGAGGTTA+TGG 0.457740 3_4:+18412867 Msa0493410:CDS
GGCAGTGCTCCTGGTGTTGG+TGG 0.458730 3_4:+18413509 Msa0493410:CDS
GCTAACTATGGCAGTGCTCC+TGG 0.459620 3_4:+18413500 Msa0493410:CDS
CAAGCCATACAGTGCTTCTC+GGG 0.466062 3_4:+18410760 Msa0493410:CDS
GCTGCTGATACTGCTAACTA+TGG 0.470068 3_4:+18413488 Msa0493410:CDS
TATGGAAACACTTACAATGA+TGG 0.470763 3_4:+18412900 Msa0493410:CDS
CCCTTCTGCAAAATTTCGCT+AGG 0.471059 3_4:+18409696 Msa0493410:five_prime_UTR
TTTCCATCAGGTTACAGTAA+TGG 0.472117 3_4:+18410645 Msa0493410:intron
GAAAGCAATGCTGTTAACTA+TGG 0.472224 3_4:+18412984 Msa0493410:CDS
GAAAGCAATGCTGTTAACTA+TGG 0.472224 3_4:+18413071 Msa0493410:CDS
GAAAGCAATGCTGTTAACTA+TGG 0.472224 3_4:+18413245 Msa0493410:CDS
GAAAGCAATGCTGTTAACTA+TGG 0.472224 3_4:+18413419 Msa0493410:CDS
ACAACTCACCGTCAAGAACT+TGG 0.473731 3_4:-18411307 None:intergenic
GTTAACTATGGTAGTGCTCC+TGG 0.474066 3_4:+18413767 Msa0493410:CDS
GATGGACCTTATGGTGGTGG+AGG 0.475314 3_4:+18412771 Msa0493410:CDS
TCCACCAGCAAAGCTGCTCC+CGG 0.475573 3_4:-18413936 None:intergenic
GAAAGCATTGCTGTTAACTA+TGG 0.481283 3_4:+18413158 Msa0493410:CDS
ATTACGGGAGAAACCATTGC+TGG 0.481459 3_4:-18413867 None:intergenic
GGCTATAGTGGTAATGCTGC+TGG 0.483124 3_4:+18412858 Msa0493410:CDS
GCTGGTGGATATGATAGAAC+TGG 0.486983 3_4:+18413950 Msa0493410:CDS
TCTTCATACAGTGGTGGGTA+TGG 0.491330 3_4:+18412825 Msa0493410:CDS
GGTAGTCCTCCTGGTGTTGG+TGG 0.492463 3_4:+18413005 Msa0493410:CDS
GGTAGTCCTCCTGGTGTTGG+TGG 0.492463 3_4:+18413092 Msa0493410:CDS
GGTAGTCCTCCTGGTGTTGG+TGG 0.492463 3_4:+18413266 Msa0493410:CDS
GGTAGTGCTCCTGGTGTTGG+TGG 0.492463 3_4:+18413776 Msa0493410:CDS
GGTGTTGGTGGTTATGGAGG+TGG 0.497309 3_4:+18413521 Msa0493410:CDS
GTTAACTATGGTAGTCCTCC+TGG 0.498449 3_4:+18412996 Msa0493410:CDS
GTTAACTATGGTAGTCCTCC+TGG 0.498449 3_4:+18413083 Msa0493410:CDS
GTTAACTATGGTAGTCCTCC+TGG 0.498449 3_4:+18413257 Msa0493410:CDS
GCACCATAACCACCAACACC+AGG 0.502988 3_4:-18413785 None:intergenic
AGCAGTGGCAGTTCAGCTCC+CGG 0.508874 3_4:+18413917 Msa0493410:CDS
GTTAACTATGGTAGTGCTCC+TGG 0.511260 3_4:+18413431 Msa0493410:CDS
GGTAGTGCACCTGGTGTTGG+TGG 0.514951 3_4:+18413695 Msa0493410:CDS
CCCGGGAGCAGCTTTGCTGG+TGG 0.515216 3_4:+18413935 Msa0493410:CDS
CCACCACCTCCACCACCATA+AGG 0.516234 3_4:-18412777 None:intergenic
CCGAGAAGCACTGTATGGCT+TGG 0.517423 3_4:-18410759 None:intergenic
CATTCAGGCCTTGGATGGAC+AGG 0.517691 3_4:+18411536 Msa0493410:CDS
TATGGCAGTGCTCCTGGTGT+TGG 0.518016 3_4:+18413506 Msa0493410:CDS
GGTAGTGCTCCTGGCGTTGG+TGG 0.518106 3_4:+18413440 Msa0493410:CDS
TATGGTAGTGCTCCTGGTGT+TGG 0.523204 3_4:+18413773 Msa0493410:CDS
GGTAGTGCTCCTAGTGTTGG+TGG 0.524446 3_4:+18413179 Msa0493410:CDS
GCTGGAGGTTATGGCGGAGG+TGG 0.526799 3_4:+18412876 Msa0493410:CDS
CATTATAGTACCGGTGGTGT+TGG 0.529829 3_4:+18413836 Msa0493410:CDS
GATCTGCATGGTCGCCGAGT+TGG 0.531154 3_4:+18412711 Msa0493410:CDS
CCTGGTGTTGGTGGTTATGG+AGG 0.533427 3_4:+18413518 Msa0493410:CDS
TAGTACCGGTGGTGTTGGTG+GGG 0.534630 3_4:+18413841 Msa0493410:CDS
CAGAAGGGTTTAAGAAGCAA+AGG 0.536688 3_4:-18409681 None:intergenic
AGTACCGGTGGTGTTGGTGG+GGG 0.540589 3_4:+18413842 Msa0493410:CDS
AGAAGGGTTTAAGAAGCAAA+GGG 0.541387 3_4:-18409680 None:intergenic
TATACCCTGTTGCACTTCCA+GGG 0.541487 3_4:-18413895 None:intergenic
GCAAATTATGGTGCTGCTGT+AGG 0.541604 3_4:+18412954 Msa0493410:CDS
TATGGTAGTCCTCCTGGTGT+TGG 0.542111 3_4:+18413002 Msa0493410:CDS
TATGGTAGTCCTCCTGGTGT+TGG 0.542111 3_4:+18413089 Msa0493410:CDS
TATGGTAGTCCTCCTGGTGT+TGG 0.542111 3_4:+18413263 Msa0493410:CDS
GTTAACTATGGTAGTGCACC+TGG 0.543191 3_4:+18413686 Msa0493410:CDS
CCTTCTGCAAAATTTCGCTA+GGG 0.543411 3_4:+18409697 Msa0493410:five_prime_UTR
CCTGGTGTTGGTGGTTATGG+TGG 0.543990 3_4:+18413704 Msa0493410:CDS
GGTGTTGGTGGTTATGGTGG+CGG 0.546476 3_4:+18413707 Msa0493410:CDS
AGTGCCATTCAGGCCTTGGA+TGG 0.546654 3_4:+18411531 Msa0493410:CDS
TGTATGGCTTGGAAAACAGA+TGG 0.547259 3_4:-18410748 None:intergenic
AGGTCCATCAAAACCACCAC+GGG 0.547372 3_4:-18412757 None:intergenic
CGCGAAACTGGTAGGTCCAA+AGG 0.548206 3_4:+18411468 Msa0493410:CDS
TATGGTAACAATGTGAGTTA+TGG 0.548828 3_4:+18413464 Msa0493410:CDS
CCACCATAACCACCAACACC+AGG 0.551866 3_4:-18413704 None:intergenic
AGTACCCGAGAAGCACTGTA+TGG 0.552565 3_4:-18410764 None:intergenic
CCACCAGCAAAGCTGCTCCC+GGG 0.552776 3_4:-18413935 None:intergenic
TATGGTAGTGCTCCTGGCGT+TGG 0.553351 3_4:+18413437 Msa0493410:CDS
CTCACCTCCTACAAACAGCT+TGG 0.553614 3_4:-18410794 None:intergenic
GCAAATTATGGTGCGGCTGT+AGG 0.554874 3_4:+18413551 Msa0493410:CDS
GGTAACAGTGCCAATTATAG+TGG 0.555191 3_4:+18413728 Msa0493410:CDS
GCAAATTATGGTGCTGCTGT+AGG 0.557750 3_4:+18413041 Msa0493410:CDS
GCAAATTATGGTGCTGCTGT+AGG 0.557750 3_4:+18413128 Msa0493410:CDS
GCAAATTATGGTGCTGCTGT+AGG 0.557750 3_4:+18413215 Msa0493410:CDS
GCAAATTATGGTGCTGCTGT+AGG 0.557750 3_4:+18413302 Msa0493410:CDS
GCAAATTATGGTGCTGCTGT+AGG 0.557750 3_4:+18413389 Msa0493410:CDS
TATGGTAGTGCACCTGGTGT+TGG 0.559778 3_4:+18413692 Msa0493410:CDS
GCAAATTATGGTGCTGCTGT+AGG 0.562482 3_4:+18413644 Msa0493410:CDS
GTATGGCTTGGAAAACAGAT+GGG 0.563319 3_4:-18410747 None:intergenic
TACTTACAATACTGTTGAGG+AGG 0.563819 3_4:+18411503 Msa0493410:CDS
GCTGCTGGAGGTTATGGCGG+AGG 0.566970 3_4:+18412873 Msa0493410:CDS
GGACTTGGATACGGTGAAAG+TGG 0.567518 3_4:+18413974 Msa0493410:CDS
AGTGATAACCATTATAGTAC+CGG 0.567539 3_4:+18413827 Msa0493410:CDS
TTTCCATAACCACCAACACT+AGG 0.569001 3_4:-18413188 None:intergenic
TTTCCATAACCACCAACACT+AGG 0.569001 3_4:-18413362 None:intergenic
TTCTCCCGTAATCAATACCC+TGG 0.569136 3_4:+18413878 Msa0493410:CDS
CCTCCATAACCACCAACACC+AGG 0.571774 3_4:-18413518 None:intergenic
TTACCATAACCACCAACGCC+AGG 0.573970 3_4:-18413449 None:intergenic
GAAAGTAATTCTGTTAACTA+CGG 0.575241 3_4:+18413581 Msa0493410:CDS
GGTAATGCTCCTAGTGTTGG+TGG 0.577654 3_4:+18413353 Msa0493410:CDS
TATGGTAGTGCTCCTAGTGT+TGG 0.577700 3_4:+18413176 Msa0493410:CDS
AGATATGGCCAAGTTCTTGA+CGG 0.577723 3_4:+18411299 Msa0493410:CDS
TTTCCATAACCACCAACACC+AGG 0.577846 3_4:-18413014 None:intergenic
TTTCCATAACCACCAACACC+AGG 0.577846 3_4:-18413101 None:intergenic
TTTCCATAACCACCAACACC+AGG 0.577846 3_4:-18413275 None:intergenic
TGGTGGGTATGGTAATGCTG+CGG 0.577924 3_4:+18412836 Msa0493410:CDS
GGTGGGTATGGTAATGCTGC+GGG 0.578487 3_4:+18412837 Msa0493410:CDS
TGTTACTTACAATACTGTTG+AGG 0.579889 3_4:+18411500 Msa0493410:CDS
GCAGTGGCAGTTCAGCTCCC+GGG 0.581433 3_4:+18413918 Msa0493410:CDS
CTTCCTTACCTGTCCATCCA+AGG 0.582774 3_4:-18411544 None:intergenic
AACAGTGCCAATTATAGTGG+TGG 0.586944 3_4:+18413731 Msa0493410:CDS
TATGGTGCTGCTGTAGGCGG+TGG 0.593381 3_4:+18412960 Msa0493410:CDS
TATGGTGCTGCTGTAGGCGG+TGG 0.593381 3_4:+18413047 Msa0493410:CDS
TATGGTGCTGCTGTAGGCGG+TGG 0.593381 3_4:+18413134 Msa0493410:CDS
TATGGTGCTGCTGTAGGCGG+TGG 0.593381 3_4:+18413221 Msa0493410:CDS
TATGGTGCTGCTGTAGGCGG+TGG 0.593381 3_4:+18413308 Msa0493410:CDS
TATGGTGCTGCTGTAGGCGG+TGG 0.593381 3_4:+18413395 Msa0493410:CDS
AGAACTGGAGGACTTGGATA+CGG 0.599018 3_4:+18413965 Msa0493410:CDS
GGTAACTCTTCATACAGTGG+TGG 0.600887 3_4:+18412819 Msa0493410:CDS
AATACCAAGCTGTTTGTAGG+AGG 0.614431 3_4:+18410790 Msa0493410:CDS
TTACGGGAGAAACCATTGCT+GGG 0.614736 3_4:-18413866 None:intergenic
GTTTCCACCATAACCACCAC+TGG 0.622310 3_4:-18412928 None:intergenic
TTATGGATCGCGAAACTGGT+AGG 0.623605 3_4:+18411460 Msa0493410:CDS
ACTACCAGTGGTGGTTATGG+TGG 0.626441 3_4:+18412924 Msa0493410:CDS
TGGCAAAATTTACACCAACT+CGG 0.629242 3_4:-18412725 None:intergenic
TACAATGATGGAACTACCAG+TGG 0.633369 3_4:+18412912 Msa0493410:CDS
GTAACTCTTCATACAGTGGT+GGG 0.634647 3_4:+18412820 Msa0493410:CDS
AATGCTGCTGGAGGTTATGG+CGG 0.635356 3_4:+18412870 Msa0493410:CDS
TATGGTAATGCTCCTAGTGT+TGG 0.640563 3_4:+18413350 Msa0493410:CDS
AATTATGGTGCGGCTGTAGG+TGG 0.642027 3_4:+18413554 Msa0493410:CDS
AATTATGGTGCTGCTGTAGG+CGG 0.652021 3_4:+18412957 Msa0493410:CDS
AATTATGGTGCTGCTGTAGG+CGG 0.652021 3_4:+18413044 Msa0493410:CDS
AATTATGGTGCTGCTGTAGG+CGG 0.652021 3_4:+18413131 Msa0493410:CDS
AATTATGGTGCTGCTGTAGG+CGG 0.652021 3_4:+18413218 Msa0493410:CDS
AATTATGGTGCTGCTGTAGG+CGG 0.652021 3_4:+18413305 Msa0493410:CDS
AATTATGGTGCTGCTGTAGG+CGG 0.652021 3_4:+18413392 Msa0493410:CDS
AATGATGGAACTACCAGTGG+TGG 0.655253 3_4:+18412915 Msa0493410:CDS
CCTGTTGCTGGTGTTTACGG+TGG 0.660993 3_4:+18413611 Msa0493410:CDS
GCCAATGAAAGACCCCGTGG+TGG 0.663368 3_4:+18412744 Msa0493410:CDS
GATAACCATTATAGTACCGG+TGG 0.664559 3_4:+18413830 Msa0493410:CDS
TATGGTAACTCTTCATACAG+TGG 0.673525 3_4:+18412816 Msa0493410:CDS
AGTGCAACAGGGTATAGCAG+TGG 0.673542 3_4:+18413902 Msa0493410:CDS
GGTGGATATGATAGAACTGG+AGG 0.686015 3_4:+18413953 Msa0493410:CDS
GGTGGTGGTGGATATCTAGG+TGG 0.686933 3_4:+18412792 Msa0493410:CDS
AAGGTCCATCAAAACCACCA+CGG 0.693888 3_4:-18412758 None:intergenic
TATGGCTTGGAAAACAGATG+GGG 0.697863 3_4:-18410746 None:intergenic
GAAGGGTTTAAGAAGCAAAG+GGG 0.702455 3_4:-18409679 None:intergenic
TATAGTGGTAATGCTGCTGG+AGG 0.708001 3_4:+18412861 Msa0493410:CDS
CCATAACCACCAACACCAGG+AGG 0.710651 3_4:-18413011 None:intergenic
CCATAACCACCAACACCAGG+AGG 0.710651 3_4:-18413098 None:intergenic
CCATAACCACCAACACCAGG+AGG 0.710651 3_4:-18413272 None:intergenic
AATACCCTGGAAGTGCAACA+GGG 0.711945 3_4:+18413891 Msa0493410:CDS
TTTGCCAATGAAAGACCCCG+TGG 0.723240 3_4:+18412741 Msa0493410:CDS
TAACAGTGCAAATTATGGTG+CGG 0.758913 3_4:+18413544 Msa0493410:CDS
GGTCCATCAAAACCACCACG+GGG 0.809353 3_4:-18412756 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TCGATTTTTTTTATTTTATT+AGG + chr3_4:18410522-18410541 Msa0493410:intron 10.0%
!!! TATTTTTCATATATATTGAA+AGG + chr3_4:18410858-18410877 Msa0493410:intron 10.0%
!!! ATTTTTCATATATATTGAAA+GGG + chr3_4:18410859-18410878 Msa0493410:intron 10.0%
!!! TGTCTAATTATTATTTTTTT+TGG + chr3_4:18412260-18412279 Msa0493410:intron 10.0%
!!! TTTCATTCATTTTTTCTTTT+GGG - chr3_4:18409912-18409931 None:intergenic 15.0%
!!! TTTTCATTCATTTTTTCTTT+TGG - chr3_4:18409913-18409932 None:intergenic 15.0%
!!! TTTGTTTATATTTTCTTTTC+TGG + chr3_4:18409969-18409988 Msa0493410:intron 15.0%
!!! TTGTTTATATTTTCTTTTCT+GGG + chr3_4:18409970-18409989 Msa0493410:intron 15.0%
!!! TTATTTTTATAATTTCCATC+AGG + chr3_4:18410633-18410652 Msa0493410:intron 15.0%
!!! ATTATTATTTTTTTTGGTAG+TGG + chr3_4:18412266-18412285 Msa0493410:intron 15.0%
!!! CAATTATGGATTAATTATAT+AGG - chr3_4:18412369-18412388 None:intergenic 15.0%
!! ATACTTCATGTTAATTTAAT+TGG + chr3_4:18412619-18412638 Msa0493410:intron 15.0%
!! CATTCATAAATAAATAAGAA+AGG - chr3_4:18412675-18412694 None:intergenic 15.0%
!! ACAAGAAATGAAAAAAAGAT+TGG - chr3_4:18409800-18409819 None:intergenic 20.0%
!! GAACAAATATAACGAAAAAT+GGG - chr3_4:18410341-18410360 None:intergenic 20.0%
!! AGAACAAATATAACGAAAAA+TGG - chr3_4:18410342-18410361 None:intergenic 20.0%
!! CAAAGACAAAATTAAAGTAA+TGG - chr3_4:18410365-18410384 None:intergenic 20.0%
!! ATCATAATTATTACTCTTTC+TGG + chr3_4:18410385-18410404 Msa0493410:intron 20.0%
!!! TAATAATAACTTTTTCCTTC+AGG + chr3_4:18410489-18410508 Msa0493410:intron 20.0%
!!! AATAATAACTTTTTCCTTCA+GGG + chr3_4:18410490-18410509 Msa0493410:intron 20.0%
!!! ATTTTGTTTGTATTTCTTTC+TGG + chr3_4:18410555-18410574 Msa0493410:intron 20.0%
!! AAATTATTTATCAGTGTCTA+CGG - chr3_4:18410967-18410986 None:intergenic 20.0%
!!! TTTTATAGCAAGGATAATTA+TGG + chr3_4:18411443-18411462 Msa0493410:intron 20.0%
!! GATATTCTCTTTATCAATTA+TGG - chr3_4:18412383-18412402 None:intergenic 20.0%
!!! TGAATGTAATTTTTGTTTTC+AGG + chr3_4:18412689-18412708 Msa0493410:intron 20.0%
! AGAAATGAAAAAAAGATTGG+TGG - chr3_4:18409797-18409816 None:intergenic 25.0%
!!! TTTGGTTTTATTGATGTTTG+TGG + chr3_4:18410005-18410024 Msa0493410:intron 25.0%
!!! TTGGTTTTATTGATGTTTGT+GGG + chr3_4:18410006-18410025 Msa0493410:intron 25.0%
! ACGAAAATGAGGAAATAATT+TGG + chr3_4:18410266-18410285 Msa0493410:intron 25.0%
! AATATAACGAAAAATGGGAA+TGG - chr3_4:18410336-18410355 None:intergenic 25.0%
! CGAAGACAAAATTAAAGTAA+TGG - chr3_4:18410468-18410487 None:intergenic 25.0%
! AATTATTTATCAGTGTCTAC+GGG - chr3_4:18410966-18410985 None:intergenic 25.0%
! ATTTCTTGTAAAACCAAGAT+AGG + chr3_4:18411102-18411121 Msa0493410:intron 25.0%
! TGCTATGATAAATCCATATT+GGG + chr3_4:18411127-18411146 Msa0493410:intron 25.0%
! TGGGATTCATTATAGTTAAT+CGG - chr3_4:18411752-18411771 None:intergenic 25.0%
! AATGTTCATTGGAATCAATT+GGG - chr3_4:18411771-18411790 None:intergenic 25.0%
! AAAGTTGACAAAAAAAGAAG+TGG - chr3_4:18411815-18411834 None:intergenic 25.0%
! ATAAGATTCGATTCACAATT+TGG + chr3_4:18411946-18411965 Msa0493410:intron 25.0%
! ACAATGCATAATATATGCAA+AGG - chr3_4:18412311-18412330 None:intergenic 25.0%
! TTAATTATATAGGCAGTACT+GGG - chr3_4:18412359-18412378 None:intergenic 25.0%
! ATTAATTATATAGGCAGTAC+TGG - chr3_4:18412360-18412379 None:intergenic 25.0%
! TTATTGTTCCTTCATTTGAT+AGG + chr3_4:18412431-18412450 Msa0493410:intron 25.0%
!!! CTGATAATGACAATTTTAAC+TGG - chr3_4:18412487-18412506 None:intergenic 25.0%
! CAGTTAAAATTGTCATTATC+AGG + chr3_4:18412485-18412504 Msa0493410:intron 25.0%
! AAAAAAGTTTGTAAGATGAC+AGG - chr3_4:18412596-18412615 None:intergenic 25.0%
! TTAATTGGCATTTGTAACAA+CGG + chr3_4:18412634-18412653 Msa0493410:intron 25.0%
! TATGGAAACAATGCAAATTA+TGG + chr3_4:18413029-18413048 Msa0493410:CDS 25.0%
! TATGGAAACAATGCAAATTA+TGG + chr3_4:18413029-18413048 Msa0493410:CDS 25.0%
! TATGGAAACAATGCAAATTA+TGG + chr3_4:18413029-18413048 Msa0493410:CDS 25.0%
! TATGGAAACAATGCAAATTA+TGG + chr3_4:18413029-18413048 Msa0493410:CDS 25.0%
! TATGGAAACAATGCAAATTA+TGG + chr3_4:18413029-18413048 Msa0493410:CDS 25.0%
! GAAAGTAATTCTGTTAACTA+CGG + chr3_4:18413581-18413600 Msa0493410:CDS 25.0%
AGCTAAGAACAACAAATTCA+AGG + chr3_4:18409759-18409778 Msa0493410:five_prime_UTR 30.0%
AATCACTGACACTTCAAAAA+CGG + chr3_4:18410074-18410093 Msa0493410:intron 30.0%
CAAACAATATAAACCTCTAC+AGG - chr3_4:18410190-18410209 None:intergenic 30.0%
!!! CATTTTTTATCCACTCTTTC+TGG - chr3_4:18410425-18410444 None:intergenic 30.0%
TTGAACGTAACTATATGTGT+TGG + chr3_4:18411003-18411022 Msa0493410:intron 30.0%
ATTCAAATTGAAGACGTGTT+TGG - chr3_4:18411055-18411074 None:intergenic 30.0%
CTGCTATGATAAATCCATAT+TGG + chr3_4:18411126-18411145 Msa0493410:intron 30.0%
! TGTTTTCTTTTTCCCTTCTA+GGG + chr3_4:18411339-18411358 Msa0493410:intron 30.0%
!!! ATCTCGTTGTTTTTATAGCA+AGG + chr3_4:18411433-18411452 Msa0493410:intron 30.0%
! TGTTACTTACAATACTGTTG+AGG + chr3_4:18411500-18411519 Msa0493410:CDS 30.0%
! ATGAATCTCTAGTGTGTTTT+TGG + chr3_4:18411691-18411710 Msa0493410:intron 30.0%
GGGATTCATTATAGTTAATC+GGG - chr3_4:18411751-18411770 None:intergenic 30.0%
CAATGTTCATTGGAATCAAT+TGG - chr3_4:18411772-18411791 None:intergenic 30.0%
TAAGCTTACACAATGTTCAT+TGG - chr3_4:18411782-18411801 None:intergenic 30.0%
TTGAGAAACATATCGTGAAT+CGG - chr3_4:18411984-18412003 None:intergenic 30.0%
TACAAATGCTGAAACTACAT+AGG + chr3_4:18412023-18412042 Msa0493410:intron 30.0%
GTAAAAGCTCGACAATTATA+AGG - chr3_4:18412160-18412179 None:intergenic 30.0%
TGCTACTGTCAATATTAGTT+TGG + chr3_4:18412205-18412224 Msa0493410:intron 30.0%
! GCTACTGTCAATATTAGTTT+GGG + chr3_4:18412206-18412225 Msa0493410:intron 30.0%
!!! TTATTTTTTTTGGTAGTGGC+CGG + chr3_4:18412270-18412289 Msa0493410:intron 30.0%
ATTCTATATCACACATGGTA+TGG - chr3_4:18412334-18412353 None:intergenic 30.0%
TATGGAAACACTTACAATGA+TGG + chr3_4:18412900-18412919 Msa0493410:CDS 30.0%
GAAAGCAATGCTGTTAAATA+TGG + chr3_4:18413332-18413351 Msa0493410:CDS 30.0%
TATGGTAACAATGTGAGTTA+TGG + chr3_4:18413464-18413483 Msa0493410:CDS 30.0%
GAAAGCAATTCTGTTAACTA+TGG + chr3_4:18413674-18413693 Msa0493410:CDS 30.0%
GAAAGCAATTCTGTTAACTA+TGG + chr3_4:18413674-18413693 Msa0493410:CDS 30.0%
AGTGATAACCATTATAGTAC+CGG + chr3_4:18413827-18413846 Msa0493410:CDS 30.0%
!!! AAGTTGATGCTTTTGCTAAA+CGG + chr3_4:18414026-18414045 Msa0493410:CDS 30.0%
AGAAGGGTTTAAGAAGCAAA+GGG - chr3_4:18409683-18409702 None:intergenic 35.0%
! ATTTTCTTTTCTGGGTTGTG+CGG + chr3_4:18409978-18409997 Msa0493410:intron 35.0%
!!! AGCTGAATGAGTTTTTTCGT+TGG + chr3_4:18410223-18410242 Msa0493410:intron 35.0%
TGGATCAAGATTCTTTCCAT+TGG + chr3_4:18410243-18410262 Msa0493410:intron 35.0%
! ATTTCCTCATTTTCGTCCAA+TGG - chr3_4:18410262-18410281 None:intergenic 35.0%
!!! ACTCTTTCTGGTTTTGTTTG+GGG - chr3_4:18410413-18410432 None:intergenic 35.0%
!!! CACTCTTTCTGGTTTTGTTT+GGG - chr3_4:18410414-18410433 None:intergenic 35.0%
TTTCCATCAGGTTACAGTAA+TGG + chr3_4:18410645-18410664 Msa0493410:intron 35.0%
GTTACAGTAATGGCTTTCTT+TGG + chr3_4:18410655-18410674 Msa0493410:exon 35.0%
GTAGAGTTGGGAGTTTATTA+AGG + chr3_4:18410677-18410696 Msa0493410:CDS 35.0%
ATATTGAAAGGGACCTTTGT+TGG + chr3_4:18410870-18410889 Msa0493410:intron 35.0%
TATTGAAAGGGACCTTTGTT+GGG + chr3_4:18410871-18410890 Msa0493410:intron 35.0%
ACGTCTTCAATTTGAATTGC+CGG + chr3_4:18411058-18411077 Msa0493410:intron 35.0%
TTATCATAGCAGACCTATCT+TGG - chr3_4:18411118-18411137 None:intergenic 35.0%
ATGCCAAGATAGGATCTTTA+TGG + chr3_4:18411174-18411193 Msa0493410:intron 35.0%
CAACCATAAAGATCCTATCT+TGG - chr3_4:18411180-18411199 None:intergenic 35.0%
ATGCAAATTCATGTGTTTGC+AGG + chr3_4:18411230-18411249 Msa0493410:intron 35.0%
!!! AGCGATGCTTTTTCAAGATA+TGG + chr3_4:18411284-18411303 Msa0493410:CDS 35.0%
! CTGTTTTCTTTTTCCCTTCT+AGG + chr3_4:18411338-18411357 Msa0493410:intron 35.0%
! GTTTTCTTTTTCCCTTCTAG+GGG + chr3_4:18411340-18411359 Msa0493410:intron 35.0%
! TTTTCTTTTTCCCTTCTAGG+GGG + chr3_4:18411341-18411360 Msa0493410:intron 35.0%
ATAATTATGGATCGCGAAAC+TGG + chr3_4:18411456-18411475 Msa0493410:CDS 35.0%
AGTAACAAAGCCAAATCCTT+TGG - chr3_4:18411487-18411506 None:intergenic 35.0%
TACTTACAATACTGTTGAGG+AGG + chr3_4:18411503-18411522 Msa0493410:CDS 35.0%
TATACGTACGAGTTGTATCT+CGG + chr3_4:18411641-18411660 Msa0493410:intron 35.0%
TCAGCATTTGTATGTGTACA+TGG - chr3_4:18412015-18412034 None:intergenic 35.0%
AGCTCACAAACTTCATTCAA+TGG - chr3_4:18412053-18412072 None:intergenic 35.0%
CTCGACAATTATAAGGACAA+GGG - chr3_4:18412153-18412172 None:intergenic 35.0%
ACTTATGTGTCTAATCATCC+AGG + chr3_4:18412178-18412197 Msa0493410:intron 35.0%
ATAATATATGCAAAGGTCCG+GGG - chr3_4:18412304-18412323 None:intergenic 35.0%
CATAATATATGCAAAGGTCC+GGG - chr3_4:18412305-18412324 None:intergenic 35.0%
GCATAATATATGCAAAGGTC+CGG - chr3_4:18412306-18412325 None:intergenic 35.0%
GGGAAATTCTATATCACACA+TGG - chr3_4:18412339-18412358 None:intergenic 35.0%
!!! AATTTTAACTGGAGACCACA+TGG - chr3_4:18412476-18412495 None:intergenic 35.0%
CATCACAGTTAAGTTACTGA+AGG - chr3_4:18412541-18412560 None:intergenic 35.0%
!!! TTTTGTTTTCAGGATCTGCA+TGG + chr3_4:18412699-18412718 Msa0493410:intron 35.0%
TGGCAAAATTTACACCAACT+CGG - chr3_4:18412728-18412747 None:intergenic 35.0%
TATGGTAACTCTTCATACAG+TGG + chr3_4:18412816-18412835 Msa0493410:CDS 35.0%
GAAAGCAATGCTGTTAACTA+TGG + chr3_4:18412984-18413003 Msa0493410:CDS 35.0%
GAAAGCAATGCTGTTAACTA+TGG + chr3_4:18412984-18413003 Msa0493410:CDS 35.0%
!! GAAAGCATTGCTGTTAACTA+TGG + chr3_4:18413158-18413177 Msa0493410:CDS 35.0%
GAAAGCAATGCTGTTAACTA+TGG + chr3_4:18412984-18413003 Msa0493410:CDS 35.0%
GAAAGCAATGCTGTTAACTA+TGG + chr3_4:18412984-18413003 Msa0493410:CDS 35.0%
TAACAGTGCAAATTATGGTG+CGG + chr3_4:18413544-18413563 Msa0493410:CDS 35.0%
GGTGCTAACAATGCAAATTA+TGG + chr3_4:18413632-18413651 Msa0493410:CDS 35.0%
!! AGTTGATGCTTTTGCTAAAC+GGG + chr3_4:18414027-18414046 Msa0493410:CDS 35.0%
GAAGGGTTTAAGAAGCAAAG+GGG - chr3_4:18409682-18409701 None:intergenic 40.0%
CAGAAGGGTTTAAGAAGCAA+AGG - chr3_4:18409684-18409703 None:intergenic 40.0%
! CCTAGCGAAATTTTGCAGAA+GGG - chr3_4:18409699-18409718 None:intergenic 40.0%
CCTTCTGCAAAATTTCGCTA+GGG + chr3_4:18409697-18409716 Msa0493410:five_prime_UTR 40.0%
CTTTCCATTGGACGAAAATG+AGG + chr3_4:18410255-18410274 Msa0493410:intron 40.0%
!!! CCACTCTTTCTGGTTTTGTT+TGG - chr3_4:18410415-18410434 None:intergenic 40.0%
CCAAACAAAACCAGAAAGAG+TGG + chr3_4:18410412-18410431 Msa0493410:intron 40.0%
ATCGAACATTTCATCCCTGA+AGG - chr3_4:18410507-18410526 None:intergenic 40.0%
AAGCCATTACTGTAACCTGA+TGG - chr3_4:18410651-18410670 None:intergenic 40.0%
ATGGCTTTCTTTGGTAGAGT+TGG + chr3_4:18410664-18410683 Msa0493410:CDS 40.0%
TGGCTTTCTTTGGTAGAGTT+GGG + chr3_4:18410665-18410684 Msa0493410:CDS 40.0%
! TATGGCTTGGAAAACAGATG+GGG - chr3_4:18410749-18410768 None:intergenic 40.0%
! GTATGGCTTGGAAAACAGAT+GGG - chr3_4:18410750-18410769 None:intergenic 40.0%
! TGTATGGCTTGGAAAACAGA+TGG - chr3_4:18410751-18410770 None:intergenic 40.0%
CCTACAAACAGCTTGGTATT+GGG - chr3_4:18410790-18410809 None:intergenic 40.0%
TCCTACAAACAGCTTGGTAT+TGG - chr3_4:18410791-18410810 None:intergenic 40.0%
AATACCAAGCTGTTTGTAGG+AGG + chr3_4:18410790-18410809 Msa0493410:CDS 40.0%
ATTGAAAGGGACCTTTGTTG+GGG + chr3_4:18410872-18410891 Msa0493410:intron 40.0%
ACAACACATTCACCAGACAT+TGG + chr3_4:18410934-18410953 Msa0493410:intron 40.0%
!! TTGAAGACGTGTTTGGTGTT+TGG - chr3_4:18411048-18411067 None:intergenic 40.0%
! CATGACAGGGTTTAAAACAG+GGG - chr3_4:18411157-18411176 None:intergenic 40.0%
! GCATGACAGGGTTTAAAACA+GGG - chr3_4:18411158-18411177 None:intergenic 40.0%
AGATATGGCCAAGTTCTTGA+CGG + chr3_4:18411299-18411318 Msa0493410:CDS 40.0%
!! TTTCTTTTTCCCTTCTAGGG+GGG + chr3_4:18411342-18411361 Msa0493410:intron 40.0%
GCTCGACAATTATAAGGACA+AGG - chr3_4:18412154-18412173 None:intergenic 40.0%
TATTGACAGTAGCAGTAACC+TGG - chr3_4:18412199-18412218 None:intergenic 40.0%
AATAACAGCATGCAACGACA+AGG - chr3_4:18412416-18412435 None:intergenic 40.0%
CAGATGAGCCTATCAAATGA+AGG - chr3_4:18412442-18412461 None:intergenic 40.0%
TCTGTGAGAAGATATCCATG+TGG + chr3_4:18412458-18412477 Msa0493410:intron 40.0%
GTAACTCTTCATACAGTGGT+GGG + chr3_4:18412820-18412839 Msa0493410:CDS 40.0%
! TACAATGATGGAACTACCAG+TGG + chr3_4:18412912-18412931 Msa0493410:CDS 40.0%
GGTGGAAACGATGCAAATTA+TGG + chr3_4:18412942-18412961 Msa0493410:CDS 40.0%
TTTCCATAACCACCAACACT+AGG - chr3_4:18413191-18413210 None:intergenic 40.0%
! TATGGTAATGCTCCTAGTGT+TGG + chr3_4:18413350-18413369 Msa0493410:CDS 40.0%
TTTCCATAACCACCAACACT+AGG - chr3_4:18413191-18413210 None:intergenic 40.0%
GGTGGTAACAGTGCAAATTA+TGG + chr3_4:18413539-18413558 Msa0493410:CDS 40.0%
GGTAACAGTGCCAATTATAG+TGG + chr3_4:18413728-18413747 Msa0493410:CDS 40.0%
AACAGTGCCAATTATAGTGG+TGG + chr3_4:18413731-18413750 Msa0493410:CDS 40.0%
GCTTTCTCCACCACTATAAT+TGG - chr3_4:18413741-18413760 None:intergenic 40.0%
! GATAACCATTATAGTACCGG+TGG + chr3_4:18413830-18413849 Msa0493410:CDS 40.0%
!! ACTTCCAGGGTATTGATTAC+GGG - chr3_4:18413885-18413904 None:intergenic 40.0%
!! CACTTCCAGGGTATTGATTA+CGG - chr3_4:18413886-18413905 None:intergenic 40.0%
TATGATAGAACTGGAGGACT+TGG + chr3_4:18413959-18413978 Msa0493410:CDS 40.0%
CCCTTCTGCAAAATTTCGCT+AGG + chr3_4:18409696-18409715 Msa0493410:five_prime_UTR 45.0%
! CCCTAGCGAAATTTTGCAGA+AGG - chr3_4:18409700-18409719 None:intergenic 45.0%
TCTGGGTTGTGCGGAAAATT+TGG + chr3_4:18409987-18410006 Msa0493410:intron 45.0%
! ACGTCTTTGATCAGAGGTGT+TGG + chr3_4:18410163-18410182 Msa0493410:intron 45.0%
CCCAATACCAAGCTGTTTGT+AGG + chr3_4:18410787-18410806 Msa0493410:CDS 45.0%
TTGAAAGGGACCTTTGTTGG+GGG + chr3_4:18410873-18410892 Msa0493410:intron 45.0%
GTCTGGTGAATGTGTTGTGT+CGG - chr3_4:18410932-18410951 None:intergenic 45.0%
AAACAGGGGCAAACCCAATA+TGG - chr3_4:18411143-18411162 None:intergenic 45.0%
! GGCATGACAGGGTTTAAAAC+AGG - chr3_4:18411159-18411178 None:intergenic 45.0%
AAACCCTGTCATGCCAAGAT+AGG + chr3_4:18411164-18411183 Msa0493410:intron 45.0%
GATCCTATCTTGGCATGACA+GGG - chr3_4:18411170-18411189 None:intergenic 45.0%
AGATCCTATCTTGGCATGAC+AGG - chr3_4:18411171-18411190 None:intergenic 45.0%
ACAACTCACCGTCAAGAACT+TGG - chr3_4:18411310-18411329 None:intergenic 45.0%
TTATGGATCGCGAAACTGGT+AGG + chr3_4:18411460-18411479 Msa0493410:CDS 45.0%
ACTGGTAGGTCCAAAGGATT+TGG + chr3_4:18411474-18411493 Msa0493410:CDS 45.0%
AAGGTCCATCAAAACCACCA+CGG - chr3_4:18412761-18412780 None:intergenic 45.0%
!!! GGTGGTTTTGATGGACCTTA+TGG + chr3_4:18412762-18412781 Msa0493410:CDS 45.0%
!! GGTTTTGATGGACCTTATGG+TGG + chr3_4:18412765-18412784 Msa0493410:CDS 45.0%
! TTTGATGGACCTTATGGTGG+TGG + chr3_4:18412768-18412787 Msa0493410:CDS 45.0%
GGTGGATATCTAGGTGGTTA+TGG + chr3_4:18412798-18412817 Msa0493410:CDS 45.0%
GGTAACTCTTCATACAGTGG+TGG + chr3_4:18412819-18412838 Msa0493410:CDS 45.0%
!! TCTTCATACAGTGGTGGGTA+TGG + chr3_4:18412825-18412844 Msa0493410:CDS 45.0%
! TATAGTGGTAATGCTGCTGG+AGG + chr3_4:18412861-18412880 Msa0493410:CDS 45.0%
! AATGATGGAACTACCAGTGG+TGG + chr3_4:18412915-18412934 Msa0493410:CDS 45.0%
!! GCAAATTATGGTGCTGCTGT+AGG + chr3_4:18412954-18412973 Msa0493410:CDS 45.0%
!! AATTATGGTGCTGCTGTAGG+CGG + chr3_4:18412957-18412976 Msa0493410:CDS 45.0%
GTTAACTATGGTAGTCCTCC+TGG + chr3_4:18412996-18413015 Msa0493410:CDS 45.0%
TTTCCATAACCACCAACACC+AGG - chr3_4:18413017-18413036 None:intergenic 45.0%
!! GCAAATTATGGTGCTGCTGT+AGG + chr3_4:18412954-18412973 Msa0493410:CDS 45.0%
!! AATTATGGTGCTGCTGTAGG+CGG + chr3_4:18412957-18412976 Msa0493410:CDS 45.0%
GTTAACTATGGTAGTCCTCC+TGG + chr3_4:18412996-18413015 Msa0493410:CDS 45.0%
TTTCCATAACCACCAACACC+AGG - chr3_4:18413017-18413036 None:intergenic 45.0%
!! GCAAATTATGGTGCTGCTGT+AGG + chr3_4:18412954-18412973 Msa0493410:CDS 45.0%
!! AATTATGGTGCTGCTGTAGG+CGG + chr3_4:18412957-18412976 Msa0493410:CDS 45.0%
! TATGGTAGTGCTCCTAGTGT+TGG + chr3_4:18413176-18413195 Msa0493410:CDS 45.0%
!! GCAAATTATGGTGCTGCTGT+AGG + chr3_4:18412954-18412973 Msa0493410:CDS 45.0%
!! AATTATGGTGCTGCTGTAGG+CGG + chr3_4:18412957-18412976 Msa0493410:CDS 45.0%
GTTAACTATGGTAGTCCTCC+TGG + chr3_4:18412996-18413015 Msa0493410:CDS 45.0%
TTTCCATAACCACCAACACC+AGG - chr3_4:18413017-18413036 None:intergenic 45.0%
!! GCAAATTATGGTGCTGCTGT+AGG + chr3_4:18412954-18412973 Msa0493410:CDS 45.0%
!! AATTATGGTGCTGCTGTAGG+CGG + chr3_4:18412957-18412976 Msa0493410:CDS 45.0%
!! GCAAATTATGGTGCTGCTGT+AGG + chr3_4:18412954-18412973 Msa0493410:CDS 45.0%
!! AATTATGGTGCTGCTGTAGG+CGG + chr3_4:18412957-18412976 Msa0493410:CDS 45.0%
! GTTAACTATGGTAGTGCTCC+TGG + chr3_4:18413170-18413189 Msa0493410:CDS 45.0%
GCTGCTGATACTGCTAACTA+TGG + chr3_4:18413488-18413507 Msa0493410:CDS 45.0%
!! GCAAATTATGGTGCTGCTGT+AGG + chr3_4:18412954-18412973 Msa0493410:CDS 45.0%
! GTTAACTATGGTAGTGCACC+TGG + chr3_4:18413686-18413705 Msa0493410:CDS 45.0%
! GTTAACTATGGTAGTGCTCC+TGG + chr3_4:18413170-18413189 Msa0493410:CDS 45.0%
CAACACCACCGGTACTATAA+TGG - chr3_4:18413838-18413857 None:intergenic 45.0%
!! CATTATAGTACCGGTGGTGT+TGG + chr3_4:18413836-18413855 Msa0493410:CDS 45.0%
TTACGGGAGAAACCATTGCT+GGG - chr3_4:18413869-18413888 None:intergenic 45.0%
ATTACGGGAGAAACCATTGC+TGG - chr3_4:18413870-18413889 None:intergenic 45.0%
TTCTCCCGTAATCAATACCC+TGG + chr3_4:18413878-18413897 Msa0493410:CDS 45.0%
! AATACCCTGGAAGTGCAACA+GGG + chr3_4:18413891-18413910 Msa0493410:CDS 45.0%
TATACCCTGTTGCACTTCCA+GGG - chr3_4:18413898-18413917 None:intergenic 45.0%
! GCTGGTGGATATGATAGAAC+TGG + chr3_4:18413950-18413969 Msa0493410:CDS 45.0%
GGTGGATATGATAGAACTGG+AGG + chr3_4:18413953-18413972 Msa0493410:CDS 45.0%
AGAACTGGAGGACTTGGATA+CGG + chr3_4:18413965-18413984 Msa0493410:CDS 45.0%
TCAGATGTGTTGTGTCGTGC+CGG + chr3_4:18410138-18410157 Msa0493410:intron 50.0%
CCTCTGATCAAAGACGTGTC+CGG - chr3_4:18410160-18410179 None:intergenic 50.0%
CCAAGCCATACAGTGCTTCT+CGG + chr3_4:18410759-18410778 Msa0493410:CDS 50.0%
CAAGCCATACAGTGCTTCTC+GGG + chr3_4:18410760-18410779 Msa0493410:CDS 50.0%
!! AGTACCCGAGAAGCACTGTA+TGG - chr3_4:18410767-18410786 None:intergenic 50.0%
CTCACCTCCTACAAACAGCT+TGG - chr3_4:18410797-18410816 None:intergenic 50.0%
ACTGTGAGAACCCCCAACAA+AGG - chr3_4:18410886-18410905 None:intergenic 50.0%
!! TACGGGTTAGTGCCAATGTC+TGG - chr3_4:18410949-18410968 None:intergenic 50.0%
ACTGCACAGCTATGTAGCAC+CGG - chr3_4:18411080-18411099 None:intergenic 50.0%
CAACTGAATCCCCCCTAGAA+GGG - chr3_4:18411354-18411373 None:intergenic 50.0%
TCAACTGAATCCCCCCTAGA+AGG - chr3_4:18411355-18411374 None:intergenic 50.0%
! ATCAAGTGCCATTCAGGCCT+TGG + chr3_4:18411527-18411546 Msa0493410:CDS 50.0%
CTTCCTTACCTGTCCATCCA+AGG - chr3_4:18411547-18411566 None:intergenic 50.0%
TTTGCCAATGAAAGACCCCG+TGG + chr3_4:18412741-18412760 Msa0493410:CDS 50.0%
AGGTCCATCAAAACCACCAC+GGG - chr3_4:18412760-18412779 None:intergenic 50.0%
! TGGTGGGTATGGTAATGCTG+CGG + chr3_4:18412836-18412855 Msa0493410:CDS 50.0%
! GGCTATAGTGGTAATGCTGC+TGG + chr3_4:18412858-18412877 Msa0493410:CDS 50.0%
GGTAATGCTGCTGGAGGTTA+TGG + chr3_4:18412867-18412886 Msa0493410:CDS 50.0%
AATGCTGCTGGAGGTTATGG+CGG + chr3_4:18412870-18412889 Msa0493410:CDS 50.0%
GGAACTACCAGTGGTGGTTA+TGG + chr3_4:18412921-18412940 Msa0493410:CDS 50.0%
ACTACCAGTGGTGGTTATGG+TGG + chr3_4:18412924-18412943 Msa0493410:CDS 50.0%
GTTTCCACCATAACCACCAC+TGG - chr3_4:18412931-18412950 None:intergenic 50.0%
TATGGTAGTCCTCCTGGTGT+TGG + chr3_4:18413002-18413021 Msa0493410:CDS 50.0%
TATGGTAGTCCTCCTGGTGT+TGG + chr3_4:18413002-18413021 Msa0493410:CDS 50.0%
!! GCTCCTAGTGTTGGTGGTTA+TGG + chr3_4:18413185-18413204 Msa0493410:CDS 50.0%
TATGGTAGTCCTCCTGGTGT+TGG + chr3_4:18413002-18413021 Msa0493410:CDS 50.0%
! GGTAATGCTCCTAGTGTTGG+TGG + chr3_4:18413353-18413372 Msa0493410:CDS 50.0%
!! GCTCCTAGTGTTGGTGGTTA+TGG + chr3_4:18413185-18413204 Msa0493410:CDS 50.0%
TTACCATAACCACCAACGCC+AGG - chr3_4:18413452-18413471 None:intergenic 50.0%
GCAAATTATGGTGCGGCTGT+AGG + chr3_4:18413551-18413570 Msa0493410:CDS 50.0%
AATTATGGTGCGGCTGTAGG+TGG + chr3_4:18413554-18413573 Msa0493410:CDS 50.0%
GCTCCTGTTGCTGGTGTTTA+CGG + chr3_4:18413608-18413627 Msa0493410:CDS 50.0%
! TATGGTAGTGCACCTGGTGT+TGG + chr3_4:18413692-18413711 Msa0493410:CDS 50.0%
! TATGGTAGTGCTCCTGGTGT+TGG + chr3_4:18413773-18413792 Msa0493410:CDS 50.0%
!! TATGGTGCTGCTGCTGGATT+TGG + chr3_4:18413800-18413819 Msa0493410:CDS 50.0%
!! TATAGTACCGGTGGTGTTGG+TGG + chr3_4:18413839-18413858 Msa0493410:CDS 50.0%
!! ATAGTACCGGTGGTGTTGGT+GGG + chr3_4:18413840-18413859 Msa0493410:CDS 50.0%
! CAATACCCTGGAAGTGCAAC+AGG + chr3_4:18413890-18413909 Msa0493410:CDS 50.0%
CTATACCCTGTTGCACTTCC+AGG - chr3_4:18413899-18413918 None:intergenic 50.0%
AGTGCAACAGGGTATAGCAG+TGG + chr3_4:18413902-18413921 Msa0493410:CDS 50.0%
GGACTTGGATACGGTGAAAG+TGG + chr3_4:18413974-18413993 Msa0493410:CDS 50.0%
CCGGACACGTCTTTGATCAG+AGG + chr3_4:18410157-18410176 Msa0493410:intron 55.0%
!! CAGAGGTGTTGGTCCTGTAG+AGG + chr3_4:18410174-18410193 Msa0493410:intron 55.0%
!! CCGAGAAGCACTGTATGGCT+TGG - chr3_4:18410762-18410781 None:intergenic 55.0%
CTAGGGGGGATTCAGTTGAG+AGG + chr3_4:18411356-18411375 Msa0493410:intron 55.0%
CGCGAAACTGGTAGGTCCAA+AGG + chr3_4:18411468-18411487 Msa0493410:CDS 55.0%
!! GGAGGCATCAAGTGCCATTC+AGG + chr3_4:18411521-18411540 Msa0493410:CDS 55.0%
! AGTGCCATTCAGGCCTTGGA+TGG + chr3_4:18411531-18411550 Msa0493410:CDS 55.0%
CTGTCCATCCAAGGCCTGAA+TGG - chr3_4:18411538-18411557 None:intergenic 55.0%
CATTCAGGCCTTGGATGGAC+AGG + chr3_4:18411536-18411555 Msa0493410:CDS 55.0%
AGGCCTTGGATGGACAGGTA+AGG + chr3_4:18411541-18411560 Msa0493410:intron 55.0%
AAGGTCCGGGGTTCGAATTC+CGG - chr3_4:18412292-18412311 None:intergenic 55.0%
ACCACCACGGGGTCTTTCAT+TGG - chr3_4:18412748-18412767 None:intergenic 55.0%
!!! AGACCCCGTGGTGGTTTTGA+TGG + chr3_4:18412753-18412772 Msa0493410:CDS 55.0%
GGTCCATCAAAACCACCACG+GGG - chr3_4:18412759-18412778 None:intergenic 55.0%
!! GATGGACCTTATGGTGGTGG+AGG + chr3_4:18412771-18412790 Msa0493410:CDS 55.0%
!! GGAGGTGGTGGTGGATATCT+AGG + chr3_4:18412789-18412808 Msa0493410:CDS 55.0%
!! GGTGGTGGTGGATATCTAGG+TGG + chr3_4:18412792-18412811 Msa0493410:CDS 55.0%
! GGTGGGTATGGTAATGCTGC+GGG + chr3_4:18412837-18412856 Msa0493410:CDS 55.0%
! GGTAATGCTGCGGGCTATAG+TGG + chr3_4:18412846-18412865 Msa0493410:CDS 55.0%
! GGTTATGGCGGAGGTGGTTA+TGG + chr3_4:18412882-18412901 Msa0493410:CDS 55.0%
CCATAACCACCAACACCAGG+AGG - chr3_4:18413014-18413033 None:intergenic 55.0%
!! CCTCCTGGTGTTGGTGGTTA+TGG + chr3_4:18413011-18413030 Msa0493410:CDS 55.0%
CCATAACCACCAACACCAGG+AGG - chr3_4:18413014-18413033 None:intergenic 55.0%
!! CCTCCTGGTGTTGGTGGTTA+TGG + chr3_4:18413011-18413030 Msa0493410:CDS 55.0%
! GGTAGTGCTCCTAGTGTTGG+TGG + chr3_4:18413179-18413198 Msa0493410:CDS 55.0%
CCATAACCACCAACACCAGG+AGG - chr3_4:18413014-18413033 None:intergenic 55.0%
!! CCTCCTGGTGTTGGTGGTTA+TGG + chr3_4:18413011-18413030 Msa0493410:CDS 55.0%
! TATGGTAGTGCTCCTGGCGT+TGG + chr3_4:18413437-18413456 Msa0493410:CDS 55.0%
GCTAACTATGGCAGTGCTCC+TGG + chr3_4:18413500-18413519 Msa0493410:CDS 55.0%
TATGGCAGTGCTCCTGGTGT+TGG + chr3_4:18413506-18413525 Msa0493410:CDS 55.0%
!! GCTCCTGGTGTTGGTGGTTA+TGG + chr3_4:18413515-18413534 Msa0493410:CDS 55.0%
CCTCCATAACCACCAACACC+AGG - chr3_4:18413521-18413540 None:intergenic 55.0%
!! CCTGGTGTTGGTGGTTATGG+AGG + chr3_4:18413014-18413033 Msa0493410:CDS 55.0%
!! GGTGTTGGTGGTTATGGAGG+TGG + chr3_4:18413521-18413540 Msa0493410:CDS 55.0%
TACGGTAGTGCTCCTGTTGC+TGG + chr3_4:18413599-18413618 Msa0493410:CDS 55.0%
CCACCGTAAACACCAGCAAC+AGG - chr3_4:18413614-18413633 None:intergenic 55.0%
CCTGTTGCTGGTGTTTACGG+TGG + chr3_4:18413611-18413630 Msa0493410:CDS 55.0%
!! GCACCTGGTGTTGGTGGTTA+TGG + chr3_4:18413701-18413720 Msa0493410:CDS 55.0%
CCACCATAACCACCAACACC+AGG - chr3_4:18413707-18413726 None:intergenic 55.0%
!! CCTGGTGTTGGTGGTTATGG+TGG + chr3_4:18413014-18413033 Msa0493410:CDS 55.0%
!! GGTGTTGGTGGTTATGGTGG+CGG + chr3_4:18413707-18413726 Msa0493410:CDS 55.0%
!! GCTCCTGGTGTTGGTGGTTA+TGG + chr3_4:18413515-18413534 Msa0493410:CDS 55.0%
GCACCATAACCACCAACACC+AGG - chr3_4:18413788-18413807 None:intergenic 55.0%
!! TAGTACCGGTGGTGTTGGTG+GGG + chr3_4:18413841-18413860 Msa0493410:CDS 55.0%
AGTGGCCGGAATTCGAACCC+CGG + chr3_4:18412284-18412303 Msa0493410:intron 60.0%
GATCTGCATGGTCGCCGAGT+TGG + chr3_4:18412711-18412730 Msa0493410:CDS 60.0%
GCCAATGAAAGACCCCGTGG+TGG + chr3_4:18412744-18412763 Msa0493410:CDS 60.0%
!! GGACCTTATGGTGGTGGAGG+TGG + chr3_4:18412774-18412793 Msa0493410:CDS 60.0%
CCACCACCTCCACCACCATA+AGG - chr3_4:18412780-18412799 None:intergenic 60.0%
!! CCTTATGGTGGTGGAGGTGG+TGG + chr3_4:18412777-18412796 Msa0493410:CDS 60.0%
!! TATGGTGGTGGAGGTGGTGG+TGG + chr3_4:18412780-18412799 Msa0493410:CDS 60.0%
!! TATGGTGCTGCTGTAGGCGG+TGG + chr3_4:18412960-18412979 Msa0493410:CDS 60.0%
! GGTAGTCCTCCTGGTGTTGG+TGG + chr3_4:18413005-18413024 Msa0493410:CDS 60.0%
!! TATGGTGCTGCTGTAGGCGG+TGG + chr3_4:18412960-18412979 Msa0493410:CDS 60.0%
! GGTAGTCCTCCTGGTGTTGG+TGG + chr3_4:18413005-18413024 Msa0493410:CDS 60.0%
!! TATGGTGCTGCTGTAGGCGG+TGG + chr3_4:18412960-18412979 Msa0493410:CDS 60.0%
!! TATGGTGCTGCTGTAGGCGG+TGG + chr3_4:18412960-18412979 Msa0493410:CDS 60.0%
! GGTAGTCCTCCTGGTGTTGG+TGG + chr3_4:18413005-18413024 Msa0493410:CDS 60.0%
!! TATGGTGCTGCTGTAGGCGG+TGG + chr3_4:18412960-18412979 Msa0493410:CDS 60.0%
!! TATGGTGCTGCTGTAGGCGG+TGG + chr3_4:18412960-18412979 Msa0493410:CDS 60.0%
!! GCTCCTGGCGTTGGTGGTTA+TGG + chr3_4:18413446-18413465 Msa0493410:CDS 60.0%
! GGTAGTGCACCTGGTGTTGG+TGG + chr3_4:18413695-18413714 Msa0493410:CDS 60.0%
! GGTAGTGCTCCTGGTGTTGG+TGG + chr3_4:18413776-18413795 Msa0493410:CDS 60.0%
!! GGTGGTTATGGTGCTGCTGC+TGG + chr3_4:18413794-18413813 Msa0493410:CDS 60.0%
!! AGTACCGGTGGTGTTGGTGG+GGG + chr3_4:18413842-18413861 Msa0493410:CDS 60.0%
AGCAGTGGCAGTTCAGCTCC+CGG + chr3_4:18413917-18413936 Msa0493410:CDS 60.0%
TCCACCAGCAAAGCTGCTCC+CGG - chr3_4:18413939-18413958 None:intergenic 60.0%
GCTGCTGGAGGTTATGGCGG+AGG + chr3_4:18412873-18412892 Msa0493410:CDS 65.0%
! GCTGGAGGTTATGGCGGAGG+TGG + chr3_4:18412876-18412895 Msa0493410:CDS 65.0%
! GGTAGTGCTCCTGGCGTTGG+TGG + chr3_4:18413440-18413459 Msa0493410:CDS 65.0%
! GGCAGTGCTCCTGGTGTTGG+TGG + chr3_4:18413509-18413528 Msa0493410:CDS 65.0%
! GTTGGTGGGGGTCCCAGCAA+TGG + chr3_4:18413854-18413873 Msa0493410:CDS 65.0%
GCAGTGGCAGTTCAGCTCCC+GGG + chr3_4:18413918-18413937 Msa0493410:CDS 65.0%
CCACCAGCAAAGCTGCTCCC+GGG - chr3_4:18413938-18413957 None:intergenic 65.0%
GGGACCCCCACCAACACCAC+CGG - chr3_4:18413849-18413868 None:intergenic 70.0%
GCTCCCGGGAGCAGCTTTGC+TGG + chr3_4:18413932-18413951 Msa0493410:CDS 70.0%
CCCGGGAGCAGCTTTGCTGG+TGG + chr3_4:18413935-18413954 Msa0493410:CDS 70.0%
Chromosome Type Strat End Strand Name
chr3_4 gene 18409646 18414054 18409646 ID=Msa0493410;Name=Msa0493410
chr3_4 mRNA 18409646 18414054 18409646 ID=Msa0493410-mRNA-1;Parent=Msa0493410;Name=Msa0493410-mRNA-1;_AED=0.04;_eAED=0.04;_QI=144|1|0.8|1|0.75|0.6|5|0|555
chr3_4 exon 18409646 18409780 18409646 ID=Msa0493410-mRNA-1:exon:5073;Parent=Msa0493410-mRNA-1
chr3_4 exon 18410655 18410811 18410655 ID=Msa0493410-mRNA-1:exon:5074;Parent=Msa0493410-mRNA-1
chr3_4 exon 18411252 18411320 18411252 ID=Msa0493410-mRNA-1:exon:5075;Parent=Msa0493410-mRNA-1
chr3_4 exon 18411451 18411557 18411451 ID=Msa0493410-mRNA-1:exon:5076;Parent=Msa0493410-mRNA-1
chr3_4 exon 18412711 18414054 18412711 ID=Msa0493410-mRNA-1:exon:5077;Parent=Msa0493410-mRNA-1
chr3_4 five_prime_UTR 18409646 18409780 18409646 ID=Msa0493410-mRNA-1:five_prime_utr;Parent=Msa0493410-mRNA-1
chr3_4 five_prime_UTR 18410655 18410663 18410655 ID=Msa0493410-mRNA-1:five_prime_utr;Parent=Msa0493410-mRNA-1
chr3_4 CDS 18410664 18410811 18410664 ID=Msa0493410-mRNA-1:cds;Parent=Msa0493410-mRNA-1
chr3_4 CDS 18411252 18411320 18411252 ID=Msa0493410-mRNA-1:cds;Parent=Msa0493410-mRNA-1
chr3_4 CDS 18411451 18411557 18411451 ID=Msa0493410-mRNA-1:cds;Parent=Msa0493410-mRNA-1
chr3_4 CDS 18412711 18414054 18412711 ID=Msa0493410-mRNA-1:cds;Parent=Msa0493410-mRNA-1
Gene Sequence

>Msa0493410

ATGGCTTTCTTTGGTAGAGTTGGGAGTTTATTAAGGAATGCAGCAAATACGAAGATCACTTCTGAGTTGAAGTTACGTTCTTCCCCATCTGTTTTCCAAGCCATACAGTGCTTCTCGGGTACTCCCAATACCAAGCTGTTTGTAGGAGGTATTTCGTATGATACTGATGAACAAAGTTTGAGCGATGCTTTTTCAAGATATGGCCAAGTTCTTGACGCAAGGATAATTATGGATCGCGAAACTGGTAGGTCCAAAGGATTTGGCTTTGTTACTTACAATACTGTTGAGGAGGCATCAAGTGCCATTCAGGCCTTGGATGGACAGGATCTGCATGGTCGCCGAGTTGGTGTAAATTTTGCCAATGAAAGACCCCGTGGTGGTTTTGATGGACCTTATGGTGGTGGAGGTGGTGGTGGATATCTAGGTGGTTATGGTAACTCTTCATACAGTGGTGGGTATGGTAATGCTGCGGGCTATAGTGGTAATGCTGCTGGAGGTTATGGCGGAGGTGGTTATGGAAACACTTACAATGATGGAACTACCAGTGGTGGTTATGGTGGAAACGATGCAAATTATGGTGCTGCTGTAGGCGGTGGTGAAAGCAATGCTGTTAACTATGGTAGTCCTCCTGGTGTTGGTGGTTATGGAAACAATGCAAATTATGGTGCTGCTGTAGGCGGTGGTGAAAGCAATGCTGTTAACTATGGTAGTCCTCCTGGTGTTGGTGGTTATGGAAACAATGCAAATTATGGTGCTGCTGTAGGCGGTGGTGAAAGCATTGCTGTTAACTATGGTAGTGCTCCTAGTGTTGGTGGTTATGGAAACAATGCAAATTATGGTGCTGCTGTAGGCGGTGGTGAAAGCAATGCTGTTAACTATGGTAGTCCTCCTGGTGTTGGTGGTTATGGAAACAATGCAAATTATGGTGCTGCTGTAGGCGGTGGTGAAAGCAATGCTGTTAAATATGGTAATGCTCCTAGTGTTGGTGGTTATGGAAACAATGCAAATTATGGTGCTGCTGTAGGCGGTGGTGAAAGCAATGCTGTTAACTATGGTAGTGCTCCTGGCGTTGGTGGTTATGGTAACAATGTGAGTTATGGTGCTGCTGATACTGCTAACTATGGCAGTGCTCCTGGTGTTGGTGGTTATGGAGGTGGTAACAGTGCAAATTATGGTGCGGCTGTAGGTGGTGAAGAAAGTAATTCTGTTAACTACGGTAGTGCTCCTGTTGCTGGTGTTTACGGTGGTGCTAACAATGCAAATTATGGTGCTGCTGTAGGTGCTAGAGAAAGCAATTCTGTTAACTATGGTAGTGCACCTGGTGTTGGTGGTTATGGTGGCGGTAACAGTGCCAATTATAGTGGTGGAGAAAGCAATTCTGTTAACTATGGTAGTGCTCCTGGTGTTGGTGGTTATGGTGCTGCTGCTGGATTTGGCAAGAGTGATAACCATTATAGTACCGGTGGTGTTGGTGGGGGTCCCAGCAATGGTTTCTCCCGTAATCAATACCCTGGAAGTGCAACAGGGTATAGCAGTGGCAGTTCAGCTCCCGGGAGCAGCTTTGCTGGTGGATATGATAGAACTGGAGGACTTGGATACGGTGAAAGTGGTCAAGAAGATTTCAAGAACGATGATCATGAAGTTGATGCTTTTGCTAAACGGGCTTGA
Protein sequence

>Msa0493410

MAFFGRVGSLLRNAANTKITSELKLRSSPSVFQAIQCFSGTPNTKLFVGGISYDTDEQSLSDAFSRYGQVLDARIIMDRETGRSKGFGFVTYNTVEEASSAIQALDGQDLHGRRVGVNFANERPRGGFDGPYGGGGGGGYLGGYGNSSYSGGYGNAAGYSGNAAGGYGGGGYGNTYNDGTTSGGYGGNDANYGAAVGGGESNAVNYGSPPGVGGYGNNANYGAAVGGGESNAVNYGSPPGVGGYGNNANYGAAVGGGESIAVNYGSAPSVGGYGNNANYGAAVGGGESNAVNYGSPPGVGGYGNNANYGAAVGGGESNAVKYGNAPSVGGYGNNANYGAAVGGGESNAVNYGSAPGVGGYGNNVSYGAADTANYGSAPGVGGYGGGNSANYGAAVGGEESNSVNYGSAPVAGVYGGANNANYGAAVGARESNSVNYGSAPGVGGYGGGNSANYSGGESNSVNYGSAPGVGGYGAAAGFGKSDNHYSTGGVGGGPSNGFSRNQYPGSATGYSSGSSAPGSSFAGGYDRTGGLGYGESGQEDFKNDDHEVDAFAKRA*