Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0880750 | XP_003609735.1 | 94.149 | 376 | 22 | 0 | 1 | 376 | 1 | 376 | 0.0 | 741 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0880750 | sp|A0A1C9CX66|CYC2_CAMAC | 42.703 | 370 | 201 | 7 | 7 | 372 | 28 | 390 | 9.10e-96 | 293 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0880750 | G7JMR7 | 94.149 | 376 | 22 | 0 | 1 | 376 | 1 | 376 | 0.0 | 741 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0010150 | Msa0880750 | 0.805905 | 1.065035e-49 | -8.615850e-47 |
| Msa0059880 | Msa0880750 | 0.828348 | 9.452952e-55 | -8.615850e-47 |
| Msa0064990 | Msa0880750 | 0.813926 | 1.998309e-51 | -8.615850e-47 |
| Msa0634290 | Msa0880750 | 0.800104 | 1.685392e-48 | -8.615850e-47 |
| Msa0668220 | Msa0880750 | 0.817817 | 2.708911e-52 | -8.615850e-47 |
| Msa0668230 | Msa0880750 | 0.826634 | 2.435807e-54 | -8.615850e-47 |
| Msa0761420 | Msa0880750 | 0.808930 | 2.431280e-50 | -8.615850e-47 |
| Msa0777070 | Msa0880750 | 0.808677 | 2.753487e-50 | -8.615850e-47 |
| Msa0793570 | Msa0880750 | 0.800224 | 1.593541e-48 | -8.615850e-47 |
| Msa0837550 | Msa0880750 | 0.812558 | 3.991654e-51 | -8.615850e-47 |
| Msa0150910 | Msa0880750 | 0.830427 | 2.954402e-55 | -8.615850e-47 |
| Msa0150920 | Msa0880750 | 0.801071 | 1.070437e-48 | -8.615850e-47 |
| Msa0212550 | Msa0880750 | 0.801861 | 7.374225e-49 | -8.615850e-47 |
| Msa0219060 | Msa0880750 | 0.801721 | 7.878274e-49 | -8.615850e-47 |
| Msa0274260 | Msa0880750 | 0.823786 | 1.148147e-53 | -8.615850e-47 |
| Msa0538440 | Msa0880750 | 0.800608 | 1.330943e-48 | -8.615850e-47 |
| Msa0538450 | Msa0880750 | 0.807001 | 6.255875e-50 | -8.615850e-47 |
| Msa0854840 | Msa0880750 | 0.809732 | 1.635952e-50 | -8.615850e-47 |
| Msa0876600 | Msa0880750 | 0.802454 | 5.566926e-49 | -8.615850e-47 |
| Msa0880750 | Msa0896920 | 0.812916 | 3.331955e-51 | -8.615850e-47 |
| Msa0880750 | Msa0913550 | 0.802350 | 5.848987e-49 | -8.615850e-47 |
| Msa0880750 | Msa0996980 | 0.813329 | 2.704053e-51 | -8.615850e-47 |
| Msa0880750 | Msa1006170 | 0.807090 | 5.989469e-50 | -8.615850e-47 |
| Msa0880750 | Msa1024350 | 0.816474 | 5.429692e-52 | -8.615850e-47 |
| Msa0880750 | Msa1087380 | 0.804599 | 1.999723e-49 | -8.615850e-47 |
| Msa0880750 | Msa1153690 | 0.800516 | 1.389340e-48 | -8.615850e-47 |
| Msa0880750 | Msa1170340 | 0.801084 | 1.063772e-48 | -8.615850e-47 |
| Msa0880750 | Msa1218520 | 0.996464 | 7.362936e-228 | -8.615850e-47 |
| Msa0880750 | Msa1436540 | 0.986592 | 2.643779e-167 | -8.615850e-47 |
| Msa0880750 | Msa1445900 | 0.806521 | 7.900135e-50 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0880750 | MtrunA17_Chr4g0068121 | 94.149 | 376 | 22 | 0 | 1 | 376 | 1 | 376 | 0.0 | 741 |
| Msa0880750 | MtrunA17_Chr4g0036961 | 82.713 | 376 | 65 | 0 | 1 | 376 | 1 | 376 | 0.0 | 665 |
| Msa0880750 | MtrunA17_Chr4g0068141 | 81.915 | 376 | 68 | 0 | 1 | 376 | 1 | 376 | 0.0 | 657 |
| Msa0880750 | MtrunA17_Chr3g0134551 | 43.122 | 378 | 188 | 9 | 7 | 372 | 28 | 390 | 2.26e-98 | 297 |
| Msa0880750 | MtrunA17_Chr3g0134571 | 43.700 | 373 | 192 | 9 | 7 | 372 | 17 | 378 | 1.06e-97 | 295 |
| Msa0880750 | MtrunA17_Chr3g0082001 | 42.593 | 378 | 190 | 9 | 7 | 372 | 28 | 390 | 4.16e-97 | 294 |
| Msa0880750 | MtrunA17_Chr3g0134561 | 42.318 | 371 | 201 | 9 | 7 | 372 | 28 | 390 | 1.66e-96 | 293 |
| Msa0880750 | MtrunA17_Chr1g0152811 | 41.192 | 369 | 207 | 7 | 7 | 372 | 64 | 425 | 3.80e-92 | 283 |
| Msa0880750 | MtrunA17_Chr1g0152831 | 40.909 | 374 | 209 | 8 | 7 | 376 | 62 | 427 | 1.50e-89 | 278 |
| Msa0880750 | MtrunA17_Chr3g0104611 | 36.126 | 382 | 222 | 12 | 2 | 372 | 7 | 377 | 2.48e-64 | 209 |
| Msa0880750 | MtrunA17_Chr1g0152791 | 39.796 | 196 | 117 | 1 | 177 | 372 | 13 | 207 | 2.62e-48 | 162 |
| Msa0880750 | MtrunA17_Chr1g0152801 | 39.516 | 124 | 69 | 5 | 48 | 171 | 11 | 128 | 5.25e-18 | 79.7 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0880750 | AT4G24220.1 | 42.742 | 372 | 196 | 8 | 7 | 372 | 28 | 388 | 1.22e-96 | 293 |
| Msa0880750 | AT4G24220.2 | 42.742 | 372 | 196 | 8 | 7 | 372 | 27 | 387 | 1.43e-96 | 293 |
| Msa0880750 | AT5G58750.2 | 31.937 | 382 | 240 | 11 | 2 | 372 | 5 | 377 | 2.63e-57 | 191 |
| Msa0880750 | AT5G58750.1 | 31.937 | 382 | 240 | 11 | 2 | 372 | 13 | 385 | 2.83e-57 | 191 |
Find 112 sgRNAs with CRISPR-Local
Find 230 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TCAAGTGTGTAGTAGAAATT+TGG | 0.187702 | 6_1:-27615816 | None:intergenic |
| ACGAAGTCACCCACCTCTTC+TGG | 0.205721 | 6_1:+27615565 | Msa0880750:CDS |
| TTCCGGTTTGGACCGTTATA+TGG | 0.216248 | 6_1:-27615695 | None:intergenic |
| GAGAAGATGGGGAAGATTTA+AGG | 0.233393 | 6_1:-27615665 | None:intergenic |
| ATGAATAAGAGTAAAGATTA+TGG | 0.264309 | 6_1:+27616353 | Msa0880750:CDS |
| CATCGATCCTCTCTCATAAT+AGG | 0.305949 | 6_1:+27615882 | Msa0880750:CDS |
| CGAGGCATATTCTCGTTAAA+AGG | 0.353149 | 6_1:-27615783 | None:intergenic |
| TCCCAAGTGTATCTATTTCC+TGG | 0.357073 | 6_1:-27615993 | None:intergenic |
| GGAGGCCCATGGAAAGTTTA+CGG | 0.374373 | 6_1:+27615429 | Msa0880750:CDS |
| AGCACTAGTTGTCGGAGTTA+CGG | 0.384801 | 6_1:+27615356 | Msa0880750:CDS |
| GACTTGATTGTAGAGAAATA+TGG | 0.385064 | 6_1:+27616245 | Msa0880750:CDS |
| ACCAGGTTGCTTCAAGGCTT+CGG | 0.385491 | 6_1:-27615400 | None:intergenic |
| CTTCTTCATCAGCTACAAAC+TGG | 0.386111 | 6_1:-27615596 | None:intergenic |
| TGAATAAGAGTAAAGATTAT+GGG | 0.394383 | 6_1:+27616354 | Msa0880750:CDS |
| GCACTAGTTGTCGGAGTTAC+GGG | 0.398289 | 6_1:+27615357 | Msa0880750:CDS |
| ACCCATGTAATGTTTAGTTC+CGG | 0.399374 | 6_1:-27615712 | None:intergenic |
| GCGTGACAAGGGTGAGGTTT+GGG | 0.400025 | 6_1:+27616223 | Msa0880750:CDS |
| TCCGGTTTGGACCGTTATAT+GGG | 0.403019 | 6_1:-27615694 | None:intergenic |
| GTTGGCTATAGGTAATAGTT+TGG | 0.406552 | 6_1:-27615544 | None:intergenic |
| GCCATGTAGGGTTACCGTTT+CGG | 0.412038 | 6_1:+27615967 | Msa0880750:CDS |
| TGTAATGTTTAGTTCCGGTT+TGG | 0.414990 | 6_1:-27615707 | None:intergenic |
| CGAAGTCACCCACCTCTTCT+GGG | 0.426334 | 6_1:+27615566 | Msa0880750:CDS |
| GGTAATGAAGCCGTCTAAGA+TGG | 0.426533 | 6_1:-27615490 | None:intergenic |
| AATTAATTAGTGTTGGTAAG+AGG | 0.426916 | 6_1:-27616450 | None:intergenic |
| GAGGAGCATGGATTTGTTAA+CGG | 0.429249 | 6_1:-27615628 | None:intergenic |
| TGATGTTGAGTTTGTTGAGT+TGG | 0.436865 | 6_1:+27616166 | Msa0880750:CDS |
| ATTAATTAGTGTTGGTAAGA+GGG | 0.438431 | 6_1:-27616449 | None:intergenic |
| CGTTTGTACAATTAAATGCT+TGG | 0.439544 | 6_1:-27616094 | None:intergenic |
| CTGCCATATGTCGCCATGTA+GGG | 0.443099 | 6_1:+27615955 | Msa0880750:CDS |
| GTCGGAGTTACGGGAATGGT+TGG | 0.453006 | 6_1:+27615366 | Msa0880750:CDS |
| TGAAACTCAAACCGTACAAC+TGG | 0.454291 | 6_1:-27616317 | None:intergenic |
| GCACAACCGTAAACTTTCCA+TGG | 0.455899 | 6_1:-27615435 | None:intergenic |
| GTGTAGTAGAAATTTGGGTA+AGG | 0.457400 | 6_1:-27615810 | None:intergenic |
| GCCCATATAACGGTCCAAAC+CGG | 0.457826 | 6_1:+27615693 | Msa0880750:CDS |
| CAAGTGTGTAGTAGAAATTT+GGG | 0.457986 | 6_1:-27615815 | None:intergenic |
| AACCGGAACTAAACATTACA+TGG | 0.459743 | 6_1:+27615710 | Msa0880750:CDS |
| TGCGTGACAAGGGTGAGGTT+TGG | 0.467326 | 6_1:+27616222 | Msa0880750:CDS |
| GACCGGACCGGGTCATATAT+CGG | 0.467396 | 6_1:-27615735 | None:intergenic |
| GAGACAACCAGGTTGCTTCA+AGG | 0.467882 | 6_1:-27615406 | None:intergenic |
| GCAAGCAATTTCCGTCAACT+TGG | 0.472649 | 6_1:-27616279 | None:intergenic |
| CAAGCATTTAATTGTACAAA+CGG | 0.475328 | 6_1:+27616095 | Msa0880750:CDS |
| TTCCCTTCTTCCATCTTAGA+CGG | 0.478293 | 6_1:+27615480 | Msa0880750:CDS |
| TCGGAGTTACGGGAATGGTT+GGG | 0.485596 | 6_1:+27615367 | Msa0880750:CDS |
| TAACCCTACATGGCGACATA+TGG | 0.494040 | 6_1:-27615958 | None:intergenic |
| TATGGGCGAGAGGAGAAGAT+GGG | 0.499172 | 6_1:-27615677 | None:intergenic |
| GTGGTTCGTGACATATAAGT+TGG | 0.499435 | 6_1:-27615761 | None:intergenic |
| CCCAAGTGTATCTATTTCCT+GGG | 0.500577 | 6_1:-27615992 | None:intergenic |
| TGTAGTAGAAATTTGGGTAA+GGG | 0.502896 | 6_1:-27615809 | None:intergenic |
| GTTTAAGAGTATCAAACGTT+GGG | 0.508284 | 6_1:+27616397 | Msa0880750:CDS |
| TTCTCCTCTCGCCCATATAA+CGG | 0.509282 | 6_1:+27615683 | Msa0880750:CDS |
| ATATGGGCGAGAGGAGAAGA+TGG | 0.509916 | 6_1:-27615678 | None:intergenic |
| AAGCCATGGTGCCAGTTGTA+CGG | 0.510935 | 6_1:+27616306 | Msa0880750:CDS |
| AGCTGAGTCAACTGCGTCAA+AGG | 0.511856 | 6_1:-27615511 | None:intergenic |
| AAGCCGTCTAAGATGGAAGA+AGG | 0.513241 | 6_1:-27615483 | None:intergenic |
| TTGAAGCAACCTGGTTGTCT+CGG | 0.517681 | 6_1:+27615408 | Msa0880750:CDS |
| AATTGCTTGCTTTGAAGCCA+TGG | 0.522227 | 6_1:+27616292 | Msa0880750:CDS |
| CATGGGCCTCCGAGACAACC+AGG | 0.527468 | 6_1:-27615417 | None:intergenic |
| CTATTTCCTGGGTACCGAAA+CGG | 0.528475 | 6_1:-27615981 | None:intergenic |
| GATATGCAATTAATTAGTGT+TGG | 0.536955 | 6_1:-27616457 | None:intergenic |
| CTGGTTGTCTCGGAGGCCCA+TGG | 0.539980 | 6_1:+27615418 | Msa0880750:CDS |
| GAAGAAGGGAACCAGCCCAT+GGG | 0.542654 | 6_1:-27615468 | None:intergenic |
| GGAAGAAGGGAACCAGCCCA+TGG | 0.542761 | 6_1:-27615469 | None:intergenic |
| GACATATAAGTTGGTTAGAC+CGG | 0.544206 | 6_1:-27615752 | None:intergenic |
| GCCGAAGCCTTGAAGCAACC+TGG | 0.546766 | 6_1:+27615399 | Msa0880750:CDS |
| CGTTTAAGAGTATCAAACGT+TGG | 0.546920 | 6_1:+27616396 | Msa0880750:CDS |
| TGGGTGACTTCGTTGGCTAT+AGG | 0.552087 | 6_1:-27615555 | None:intergenic |
| ACCGAAACGGTAACCCTACA+TGG | 0.555455 | 6_1:-27615968 | None:intergenic |
| ATAAGTTGGTTAGACCGGAC+CGG | 0.564907 | 6_1:-27615747 | None:intergenic |
| GTTGCTTCAAGGCTTCGGCT+AGG | 0.565659 | 6_1:-27615395 | None:intergenic |
| AACGTTGGGTGGCTAAGCTG+AGG | 0.568432 | 6_1:+27616411 | Msa0880750:CDS |
| TAAGTTGGTTAGACCGGACC+GGG | 0.568935 | 6_1:-27615746 | None:intergenic |
| GGTGACAACGTTGAGGAGCA+TGG | 0.572548 | 6_1:-27615640 | None:intergenic |
| GTCCGATATATGACCCGGTC+CGG | 0.572844 | 6_1:+27615733 | Msa0880750:CDS |
| CATGGGTCCGATATATGACC+CGG | 0.576515 | 6_1:+27615728 | Msa0880750:CDS |
| GAAGATGGAGCATCAAAGTC+CGG | 0.577025 | 6_1:+27615332 | None:intergenic |
| GGGTTACCGTTTCGGTACCC+AGG | 0.577350 | 6_1:+27615975 | Msa0880750:CDS |
| TATGTCAGATGCAGATGTGC+TGG | 0.581656 | 6_1:+27616028 | Msa0880750:CDS |
| ACCCAGGAAATAGATACACT+TGG | 0.581714 | 6_1:+27615991 | Msa0880750:CDS |
| ATGGGCGAGAGGAGAAGATG+GGG | 0.583776 | 6_1:-27615676 | None:intergenic |
| GGAACGTCACCCAGAAGAGG+TGG | 0.588892 | 6_1:-27615575 | None:intergenic |
| AGTCCGGTAGCACTAGTTGT+CGG | 0.589052 | 6_1:+27615348 | Msa0880750:CDS |
| TAAGAGTATCAAACGTTGGG+TGG | 0.589772 | 6_1:+27616400 | Msa0880750:CDS |
| ACTTCATAAGACCAAGTTGA+CGG | 0.590122 | 6_1:+27616268 | Msa0880750:CDS |
| ACTCCGACAACTAGTGCTAC+CGG | 0.590861 | 6_1:-27615351 | None:intergenic |
| AAATTTCTACTACACACTTG+AGG | 0.594291 | 6_1:+27615818 | Msa0880750:CDS |
| AGTTGTCGGAGTTACGGGAA+TGG | 0.598013 | 6_1:+27615362 | Msa0880750:CDS |
| GAAGAGGTGGGTGACTTCGT+TGG | 0.599842 | 6_1:-27615562 | None:intergenic |
| GTTGATGCGTGACAAGGGTG+AGG | 0.600978 | 6_1:+27616217 | Msa0880750:CDS |
| CACAACCGTAAACTTTCCAT+GGG | 0.604149 | 6_1:-27615434 | None:intergenic |
| AGATGGGGAAGATTTAAGGA+CGG | 0.605788 | 6_1:-27615661 | None:intergenic |
| TGTATTGAGTATGTTATCGA+AGG | 0.607676 | 6_1:-27615861 | None:intergenic |
| AAGCAACCTGGTTGTCTCGG+AGG | 0.615645 | 6_1:+27615411 | Msa0880750:CDS |
| CGTTGAGTTGATGCGTGACA+AGG | 0.616253 | 6_1:+27616211 | Msa0880750:CDS |
| GGCATATTCTCGTTAAAAGG+TGG | 0.617142 | 6_1:-27615780 | None:intergenic |
| AAGAAGGGAACCAGCCCATG+GGG | 0.620178 | 6_1:-27615467 | None:intergenic |
| ACGTTGGGTGGCTAAGCTGA+GGG | 0.622480 | 6_1:+27616412 | Msa0880750:CDS |
| AAATTTGGGTAAGGGAGTCG+AGG | 0.633911 | 6_1:-27615801 | None:intergenic |
| CCCAGGAAATAGATACACTT+GGG | 0.634173 | 6_1:+27615992 | Msa0880750:CDS |
| ACTGGAACGTCACCCAGAAG+AGG | 0.637414 | 6_1:-27615578 | None:intergenic |
| GCTGCCATATGTCGCCATGT+AGG | 0.637754 | 6_1:+27615954 | Msa0880750:CDS |
| TAAGGACGGTGACAACGTTG+AGG | 0.640341 | 6_1:-27615647 | None:intergenic |
| AAACCGTACAACTGGCACCA+TGG | 0.641744 | 6_1:-27616309 | None:intergenic |
| TGGACCGTTATATGGGCGAG+AGG | 0.642068 | 6_1:-27615687 | None:intergenic |
| AAAGCAACATGTGTGGGCTG+CGG | 0.643605 | 6_1:+27616052 | Msa0880750:CDS |
| AGACGCACCTATTATGAGAG+AGG | 0.645667 | 6_1:-27615889 | None:intergenic |
| ACCGGAACTAAACATTACAT+GGG | 0.656595 | 6_1:+27615711 | Msa0880750:CDS |
| AGCCGTCTAAGATGGAAGAA+GGG | 0.658137 | 6_1:-27615482 | None:intergenic |
| GCTGGCAAAGCAACATGTGT+GGG | 0.665071 | 6_1:+27616046 | Msa0880750:CDS |
| GTTGAGTTGATGCGTGACAA+GGG | 0.676462 | 6_1:+27616212 | Msa0880750:CDS |
| TGCTGGCAAAGCAACATGTG+TGG | 0.677132 | 6_1:+27616045 | Msa0880750:CDS |
| GAACGTCACCCAGAAGAGGT+GGG | 0.689273 | 6_1:-27615574 | None:intergenic |
| AGAAGGGAACCAGCCCATGG+GGG | 0.712890 | 6_1:-27615466 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ATGAATAAGAGTAAAGATTA+TGG | + | chr6_1:27616353-27616372 | Msa0880750:CDS | 20.0% |
| !! | TGAATAAGAGTAAAGATTAT+GGG | + | chr6_1:27616354-27616373 | Msa0880750:CDS | 20.0% |
| !! | ATGAATAAGAGTAAAGATTA+TGG | + | chr6_1:27616353-27616372 | Msa0880750:CDS | 20.0% |
| !! | TGAATAAGAGTAAAGATTAT+GGG | + | chr6_1:27616354-27616373 | Msa0880750:CDS | 20.0% |
| ! | CAAGCATTTAATTGTACAAA+CGG | + | chr6_1:27616095-27616114 | Msa0880750:CDS | 25.0% |
| ! | CAAGCATTTAATTGTACAAA+CGG | + | chr6_1:27616095-27616114 | Msa0880750:CDS | 25.0% |
| TGTAGTAGAAATTTGGGTAA+GGG | - | chr6_1:27615812-27615831 | None:intergenic | 30.0% | |
| CAAGTGTGTAGTAGAAATTT+GGG | - | chr6_1:27615818-27615837 | None:intergenic | 30.0% | |
| TCAAGTGTGTAGTAGAAATT+TGG | - | chr6_1:27615819-27615838 | None:intergenic | 30.0% | |
| AAATTTCTACTACACACTTG+AGG | + | chr6_1:27615818-27615837 | Msa0880750:CDS | 30.0% | |
| TGTATTGAGTATGTTATCGA+AGG | - | chr6_1:27615864-27615883 | None:intergenic | 30.0% | |
| CGTTTGTACAATTAAATGCT+TGG | - | chr6_1:27616097-27616116 | None:intergenic | 30.0% | |
| GACTTGATTGTAGAGAAATA+TGG | + | chr6_1:27616245-27616264 | Msa0880750:CDS | 30.0% | |
| !! | GTTTAAGAGTATCAAACGTT+GGG | + | chr6_1:27616397-27616416 | Msa0880750:CDS | 30.0% |
| TGTAGTAGAAATTTGGGTAA+GGG | - | chr6_1:27615812-27615831 | None:intergenic | 30.0% | |
| CAAGTGTGTAGTAGAAATTT+GGG | - | chr6_1:27615818-27615837 | None:intergenic | 30.0% | |
| TCAAGTGTGTAGTAGAAATT+TGG | - | chr6_1:27615819-27615838 | None:intergenic | 30.0% | |
| AAATTTCTACTACACACTTG+AGG | + | chr6_1:27615818-27615837 | Msa0880750:CDS | 30.0% | |
| TGTATTGAGTATGTTATCGA+AGG | - | chr6_1:27615864-27615883 | None:intergenic | 30.0% | |
| CGTTTGTACAATTAAATGCT+TGG | - | chr6_1:27616097-27616116 | None:intergenic | 30.0% | |
| GACTTGATTGTAGAGAAATA+TGG | + | chr6_1:27616245-27616264 | Msa0880750:CDS | 30.0% | |
| !! | GTTTAAGAGTATCAAACGTT+GGG | + | chr6_1:27616397-27616416 | Msa0880750:CDS | 30.0% |
| GTTGGCTATAGGTAATAGTT+TGG | - | chr6_1:27615547-27615566 | None:intergenic | 35.0% | |
| ! | TGTAATGTTTAGTTCCGGTT+TGG | - | chr6_1:27615710-27615729 | None:intergenic | 35.0% |
| AACCGGAACTAAACATTACA+TGG | + | chr6_1:27615710-27615729 | Msa0880750:CDS | 35.0% | |
| ACCGGAACTAAACATTACAT+GGG | + | chr6_1:27615711-27615730 | Msa0880750:CDS | 35.0% | |
| ! | ACCCATGTAATGTTTAGTTC+CGG | - | chr6_1:27615715-27615734 | None:intergenic | 35.0% |
| !! | GACATATAAGTTGGTTAGAC+CGG | - | chr6_1:27615755-27615774 | None:intergenic | 35.0% |
| GTGTAGTAGAAATTTGGGTA+AGG | - | chr6_1:27615813-27615832 | None:intergenic | 35.0% | |
| !! | TTTTCACTTGGAAGAGTATG+TGG | + | chr6_1:27616123-27616142 | Msa0880750:CDS | 35.0% |
| !! | TGATGTTGAGTTTGTTGAGT+TGG | + | chr6_1:27616166-27616185 | Msa0880750:CDS | 35.0% |
| ! | ACTTCATAAGACCAAGTTGA+CGG | + | chr6_1:27616268-27616287 | Msa0880750:CDS | 35.0% |
| !!! | TATGGGTTTTTTGAGTATGC+TGG | + | chr6_1:27616371-27616390 | Msa0880750:CDS | 35.0% |
| !! | CGTTTAAGAGTATCAAACGT+TGG | + | chr6_1:27616396-27616415 | Msa0880750:CDS | 35.0% |
| GTTGGCTATAGGTAATAGTT+TGG | - | chr6_1:27615547-27615566 | None:intergenic | 35.0% | |
| ! | TGTAATGTTTAGTTCCGGTT+TGG | - | chr6_1:27615710-27615729 | None:intergenic | 35.0% |
| AACCGGAACTAAACATTACA+TGG | + | chr6_1:27615710-27615729 | Msa0880750:CDS | 35.0% | |
| ACCGGAACTAAACATTACAT+GGG | + | chr6_1:27615711-27615730 | Msa0880750:CDS | 35.0% | |
| ! | ACCCATGTAATGTTTAGTTC+CGG | - | chr6_1:27615715-27615734 | None:intergenic | 35.0% |
| !! | GACATATAAGTTGGTTAGAC+CGG | - | chr6_1:27615755-27615774 | None:intergenic | 35.0% |
| GTGTAGTAGAAATTTGGGTA+AGG | - | chr6_1:27615813-27615832 | None:intergenic | 35.0% | |
| !! | TTTTCACTTGGAAGAGTATG+TGG | + | chr6_1:27616123-27616142 | Msa0880750:CDS | 35.0% |
| !! | TGATGTTGAGTTTGTTGAGT+TGG | + | chr6_1:27616166-27616185 | Msa0880750:CDS | 35.0% |
| ! | ACTTCATAAGACCAAGTTGA+CGG | + | chr6_1:27616268-27616287 | Msa0880750:CDS | 35.0% |
| !!! | TATGGGTTTTTTGAGTATGC+TGG | + | chr6_1:27616371-27616390 | Msa0880750:CDS | 35.0% |
| !! | CGTTTAAGAGTATCAAACGT+TGG | + | chr6_1:27616396-27616415 | Msa0880750:CDS | 35.0% |
| CACAACCGTAAACTTTCCAT+GGG | - | chr6_1:27615437-27615456 | None:intergenic | 40.0% | |
| TTCCCTTCTTCCATCTTAGA+CGG | + | chr6_1:27615480-27615499 | Msa0880750:CDS | 40.0% | |
| CTTCTTCATCAGCTACAAAC+TGG | - | chr6_1:27615599-27615618 | None:intergenic | 40.0% | |
| !! | GAGGAGCATGGATTTGTTAA+CGG | - | chr6_1:27615631-27615650 | None:intergenic | 40.0% |
| AGATGGGGAAGATTTAAGGA+CGG | - | chr6_1:27615664-27615683 | None:intergenic | 40.0% | |
| GAGAAGATGGGGAAGATTTA+AGG | - | chr6_1:27615668-27615687 | None:intergenic | 40.0% | |
| GTGGTTCGTGACATATAAGT+TGG | - | chr6_1:27615764-27615783 | None:intergenic | 40.0% | |
| GGCATATTCTCGTTAAAAGG+TGG | - | chr6_1:27615783-27615802 | None:intergenic | 40.0% | |
| CGAGGCATATTCTCGTTAAA+AGG | - | chr6_1:27615786-27615805 | None:intergenic | 40.0% | |
| CATCGATCCTCTCTCATAAT+AGG | + | chr6_1:27615882-27615901 | Msa0880750:CDS | 40.0% | |
| ACCCAGGAAATAGATACACT+TGG | + | chr6_1:27615991-27616010 | Msa0880750:CDS | 40.0% | |
| CCCAAGTGTATCTATTTCCT+GGG | - | chr6_1:27615995-27616014 | None:intergenic | 40.0% | |
| CCCAGGAAATAGATACACTT+GGG | + | chr6_1:27615992-27616011 | Msa0880750:CDS | 40.0% | |
| TCCCAAGTGTATCTATTTCC+TGG | - | chr6_1:27615996-27616015 | None:intergenic | 40.0% | |
| !! | AATTGCTTGCTTTGAAGCCA+TGG | + | chr6_1:27616292-27616311 | Msa0880750:CDS | 40.0% |
| TGAAACTCAAACCGTACAAC+TGG | - | chr6_1:27616320-27616339 | None:intergenic | 40.0% | |
| !! | TAAGAGTATCAAACGTTGGG+TGG | + | chr6_1:27616400-27616419 | Msa0880750:CDS | 40.0% |
| CACAACCGTAAACTTTCCAT+GGG | - | chr6_1:27615437-27615456 | None:intergenic | 40.0% | |
| TTCCCTTCTTCCATCTTAGA+CGG | + | chr6_1:27615480-27615499 | Msa0880750:CDS | 40.0% | |
| CTTCTTCATCAGCTACAAAC+TGG | - | chr6_1:27615599-27615618 | None:intergenic | 40.0% | |
| !! | GAGGAGCATGGATTTGTTAA+CGG | - | chr6_1:27615631-27615650 | None:intergenic | 40.0% |
| AGATGGGGAAGATTTAAGGA+CGG | - | chr6_1:27615664-27615683 | None:intergenic | 40.0% | |
| GAGAAGATGGGGAAGATTTA+AGG | - | chr6_1:27615668-27615687 | None:intergenic | 40.0% | |
| GTGGTTCGTGACATATAAGT+TGG | - | chr6_1:27615764-27615783 | None:intergenic | 40.0% | |
| GGCATATTCTCGTTAAAAGG+TGG | - | chr6_1:27615783-27615802 | None:intergenic | 40.0% | |
| CGAGGCATATTCTCGTTAAA+AGG | - | chr6_1:27615786-27615805 | None:intergenic | 40.0% | |
| CATCGATCCTCTCTCATAAT+AGG | + | chr6_1:27615882-27615901 | Msa0880750:CDS | 40.0% | |
| ACCCAGGAAATAGATACACT+TGG | + | chr6_1:27615991-27616010 | Msa0880750:CDS | 40.0% | |
| CCCAAGTGTATCTATTTCCT+GGG | - | chr6_1:27615995-27616014 | None:intergenic | 40.0% | |
| CCCAGGAAATAGATACACTT+GGG | + | chr6_1:27615992-27616011 | Msa0880750:CDS | 40.0% | |
| TCCCAAGTGTATCTATTTCC+TGG | - | chr6_1:27615996-27616015 | None:intergenic | 40.0% | |
| !! | AATTGCTTGCTTTGAAGCCA+TGG | + | chr6_1:27616292-27616311 | Msa0880750:CDS | 40.0% |
| TGAAACTCAAACCGTACAAC+TGG | - | chr6_1:27616320-27616339 | None:intergenic | 40.0% | |
| !! | TAAGAGTATCAAACGTTGGG+TGG | + | chr6_1:27616400-27616419 | Msa0880750:CDS | 40.0% |
| AGCACTAGTTGTCGGAGTTA+CGG | + | chr6_1:27615356-27615375 | Msa0880750:CDS | 45.0% | |
| TTGAAGCAACCTGGTTGTCT+CGG | + | chr6_1:27615408-27615427 | Msa0880750:CDS | 45.0% | |
| GCACAACCGTAAACTTTCCA+TGG | - | chr6_1:27615438-27615457 | None:intergenic | 45.0% | |
| ! | AGCCGTCTAAGATGGAAGAA+GGG | - | chr6_1:27615485-27615504 | None:intergenic | 45.0% |
| ! | AAGCCGTCTAAGATGGAAGA+AGG | - | chr6_1:27615486-27615505 | None:intergenic | 45.0% |
| GGTAATGAAGCCGTCTAAGA+TGG | - | chr6_1:27615493-27615512 | None:intergenic | 45.0% | |
| TTCTCCTCTCGCCCATATAA+CGG | + | chr6_1:27615683-27615702 | Msa0880750:CDS | 45.0% | |
| !! | TCCGGTTTGGACCGTTATAT+GGG | - | chr6_1:27615697-27615716 | None:intergenic | 45.0% |
| !! | TTCCGGTTTGGACCGTTATA+TGG | - | chr6_1:27615698-27615717 | None:intergenic | 45.0% |
| !! | ATAAGTTGGTTAGACCGGAC+CGG | - | chr6_1:27615750-27615769 | None:intergenic | 45.0% |
| AAATTTGGGTAAGGGAGTCG+AGG | - | chr6_1:27615804-27615823 | None:intergenic | 45.0% | |
| AGACGCACCTATTATGAGAG+AGG | - | chr6_1:27615892-27615911 | None:intergenic | 45.0% | |
| TAACCCTACATGGCGACATA+TGG | - | chr6_1:27615961-27615980 | None:intergenic | 45.0% | |
| !! | CTATTTCCTGGGTACCGAAA+CGG | - | chr6_1:27615984-27616003 | None:intergenic | 45.0% |
| TATGTCAGATGCAGATGTGC+TGG | + | chr6_1:27616028-27616047 | Msa0880750:CDS | 45.0% | |
| ! | CAAACGGCGACATTTTCACT+TGG | + | chr6_1:27616111-27616130 | Msa0880750:CDS | 45.0% |
| !! | GTTGAGTTGATGCGTGACAA+GGG | + | chr6_1:27616212-27616231 | Msa0880750:CDS | 45.0% |
| GCAAGCAATTTCCGTCAACT+TGG | - | chr6_1:27616282-27616301 | None:intergenic | 45.0% | |
| AGCACTAGTTGTCGGAGTTA+CGG | + | chr6_1:27615356-27615375 | Msa0880750:CDS | 45.0% | |
| TTGAAGCAACCTGGTTGTCT+CGG | + | chr6_1:27615408-27615427 | Msa0880750:CDS | 45.0% | |
| GCACAACCGTAAACTTTCCA+TGG | - | chr6_1:27615438-27615457 | None:intergenic | 45.0% | |
| ! | AGCCGTCTAAGATGGAAGAA+GGG | - | chr6_1:27615485-27615504 | None:intergenic | 45.0% |
| ! | AAGCCGTCTAAGATGGAAGA+AGG | - | chr6_1:27615486-27615505 | None:intergenic | 45.0% |
| GGTAATGAAGCCGTCTAAGA+TGG | - | chr6_1:27615493-27615512 | None:intergenic | 45.0% | |
| TTCTCCTCTCGCCCATATAA+CGG | + | chr6_1:27615683-27615702 | Msa0880750:CDS | 45.0% | |
| !! | TCCGGTTTGGACCGTTATAT+GGG | - | chr6_1:27615697-27615716 | None:intergenic | 45.0% |
| !! | TTCCGGTTTGGACCGTTATA+TGG | - | chr6_1:27615698-27615717 | None:intergenic | 45.0% |
| !! | ATAAGTTGGTTAGACCGGAC+CGG | - | chr6_1:27615750-27615769 | None:intergenic | 45.0% |
| AAATTTGGGTAAGGGAGTCG+AGG | - | chr6_1:27615804-27615823 | None:intergenic | 45.0% | |
| AGACGCACCTATTATGAGAG+AGG | - | chr6_1:27615892-27615911 | None:intergenic | 45.0% | |
| TAACCCTACATGGCGACATA+TGG | - | chr6_1:27615961-27615980 | None:intergenic | 45.0% | |
| !! | CTATTTCCTGGGTACCGAAA+CGG | - | chr6_1:27615984-27616003 | None:intergenic | 45.0% |
| TATGTCAGATGCAGATGTGC+TGG | + | chr6_1:27616028-27616047 | Msa0880750:CDS | 45.0% | |
| ! | CAAACGGCGACATTTTCACT+TGG | + | chr6_1:27616111-27616130 | Msa0880750:CDS | 45.0% |
| !! | GTTGAGTTGATGCGTGACAA+GGG | + | chr6_1:27616212-27616231 | Msa0880750:CDS | 45.0% |
| GCAAGCAATTTCCGTCAACT+TGG | - | chr6_1:27616282-27616301 | None:intergenic | 45.0% | |
| AGTCCGGTAGCACTAGTTGT+CGG | + | chr6_1:27615348-27615367 | Msa0880750:CDS | 50.0% | |
| ACTCCGACAACTAGTGCTAC+CGG | - | chr6_1:27615354-27615373 | None:intergenic | 50.0% | |
| GCACTAGTTGTCGGAGTTAC+GGG | + | chr6_1:27615357-27615376 | Msa0880750:CDS | 50.0% | |
| AGTTGTCGGAGTTACGGGAA+TGG | + | chr6_1:27615362-27615381 | Msa0880750:CDS | 50.0% | |
| TCGGAGTTACGGGAATGGTT+GGG | + | chr6_1:27615367-27615386 | Msa0880750:CDS | 50.0% | |
| ACCAGGTTGCTTCAAGGCTT+CGG | - | chr6_1:27615403-27615422 | None:intergenic | 50.0% | |
| GAGACAACCAGGTTGCTTCA+AGG | - | chr6_1:27615409-27615428 | None:intergenic | 50.0% | |
| GGAGGCCCATGGAAAGTTTA+CGG | + | chr6_1:27615429-27615448 | Msa0880750:CDS | 50.0% | |
| AGCTGAGTCAACTGCGTCAA+AGG | - | chr6_1:27615514-27615533 | None:intergenic | 50.0% | |
| ! | TGGGTGACTTCGTTGGCTAT+AGG | - | chr6_1:27615558-27615577 | None:intergenic | 50.0% |
| TAAGGACGGTGACAACGTTG+AGG | - | chr6_1:27615650-27615669 | None:intergenic | 50.0% | |
| TATGGGCGAGAGGAGAAGAT+GGG | - | chr6_1:27615680-27615699 | None:intergenic | 50.0% | |
| ATATGGGCGAGAGGAGAAGA+TGG | - | chr6_1:27615681-27615700 | None:intergenic | 50.0% | |
| GCCCATATAACGGTCCAAAC+CGG | + | chr6_1:27615693-27615712 | Msa0880750:CDS | 50.0% | |
| CATGGGTCCGATATATGACC+CGG | + | chr6_1:27615728-27615747 | Msa0880750:CDS | 50.0% | |
| !! | TAAGTTGGTTAGACCGGACC+GGG | - | chr6_1:27615749-27615768 | None:intergenic | 50.0% |
| CTGCCATATGTCGCCATGTA+GGG | + | chr6_1:27615955-27615974 | Msa0880750:CDS | 50.0% | |
| GCCATGTAGGGTTACCGTTT+CGG | + | chr6_1:27615967-27615986 | Msa0880750:CDS | 50.0% | |
| ACCGAAACGGTAACCCTACA+TGG | - | chr6_1:27615971-27615990 | None:intergenic | 50.0% | |
| TGCTGGCAAAGCAACATGTG+TGG | + | chr6_1:27616045-27616064 | Msa0880750:CDS | 50.0% | |
| GCTGGCAAAGCAACATGTGT+GGG | + | chr6_1:27616046-27616065 | Msa0880750:CDS | 50.0% | |
| ! | AAAGCAACATGTGTGGGCTG+CGG | + | chr6_1:27616052-27616071 | Msa0880750:CDS | 50.0% |
| !! | CGTTGAGTTGATGCGTGACA+AGG | + | chr6_1:27616211-27616230 | Msa0880750:CDS | 50.0% |
| ! | AAGCCATGGTGCCAGTTGTA+CGG | + | chr6_1:27616306-27616325 | Msa0880750:CDS | 50.0% |
| AAACCGTACAACTGGCACCA+TGG | - | chr6_1:27616312-27616331 | None:intergenic | 50.0% | |
| AGTCCGGTAGCACTAGTTGT+CGG | + | chr6_1:27615348-27615367 | Msa0880750:CDS | 50.0% | |
| ACTCCGACAACTAGTGCTAC+CGG | - | chr6_1:27615354-27615373 | None:intergenic | 50.0% | |
| GCACTAGTTGTCGGAGTTAC+GGG | + | chr6_1:27615357-27615376 | Msa0880750:CDS | 50.0% | |
| AGTTGTCGGAGTTACGGGAA+TGG | + | chr6_1:27615362-27615381 | Msa0880750:CDS | 50.0% | |
| TCGGAGTTACGGGAATGGTT+GGG | + | chr6_1:27615367-27615386 | Msa0880750:CDS | 50.0% | |
| ACCAGGTTGCTTCAAGGCTT+CGG | - | chr6_1:27615403-27615422 | None:intergenic | 50.0% | |
| GAGACAACCAGGTTGCTTCA+AGG | - | chr6_1:27615409-27615428 | None:intergenic | 50.0% | |
| GGAGGCCCATGGAAAGTTTA+CGG | + | chr6_1:27615429-27615448 | Msa0880750:CDS | 50.0% | |
| AGCTGAGTCAACTGCGTCAA+AGG | - | chr6_1:27615514-27615533 | None:intergenic | 50.0% | |
| ! | TGGGTGACTTCGTTGGCTAT+AGG | - | chr6_1:27615558-27615577 | None:intergenic | 50.0% |
| TAAGGACGGTGACAACGTTG+AGG | - | chr6_1:27615650-27615669 | None:intergenic | 50.0% | |
| TATGGGCGAGAGGAGAAGAT+GGG | - | chr6_1:27615680-27615699 | None:intergenic | 50.0% | |
| ATATGGGCGAGAGGAGAAGA+TGG | - | chr6_1:27615681-27615700 | None:intergenic | 50.0% | |
| GCCCATATAACGGTCCAAAC+CGG | + | chr6_1:27615693-27615712 | Msa0880750:CDS | 50.0% | |
| CATGGGTCCGATATATGACC+CGG | + | chr6_1:27615728-27615747 | Msa0880750:CDS | 50.0% | |
| !! | TAAGTTGGTTAGACCGGACC+GGG | - | chr6_1:27615749-27615768 | None:intergenic | 50.0% |
| CTGCCATATGTCGCCATGTA+GGG | + | chr6_1:27615955-27615974 | Msa0880750:CDS | 50.0% | |
| GCCATGTAGGGTTACCGTTT+CGG | + | chr6_1:27615967-27615986 | Msa0880750:CDS | 50.0% | |
| ACCGAAACGGTAACCCTACA+TGG | - | chr6_1:27615971-27615990 | None:intergenic | 50.0% | |
| TGCTGGCAAAGCAACATGTG+TGG | + | chr6_1:27616045-27616064 | Msa0880750:CDS | 50.0% | |
| GCTGGCAAAGCAACATGTGT+GGG | + | chr6_1:27616046-27616065 | Msa0880750:CDS | 50.0% | |
| ! | AAAGCAACATGTGTGGGCTG+CGG | + | chr6_1:27616052-27616071 | Msa0880750:CDS | 50.0% |
| !! | CGTTGAGTTGATGCGTGACA+AGG | + | chr6_1:27616211-27616230 | Msa0880750:CDS | 50.0% |
| ! | AAGCCATGGTGCCAGTTGTA+CGG | + | chr6_1:27616306-27616325 | Msa0880750:CDS | 50.0% |
| AAACCGTACAACTGGCACCA+TGG | - | chr6_1:27616312-27616331 | None:intergenic | 50.0% | |
| GTCGGAGTTACGGGAATGGT+TGG | + | chr6_1:27615366-27615385 | Msa0880750:CDS | 55.0% | |
| GTTGCTTCAAGGCTTCGGCT+AGG | - | chr6_1:27615398-27615417 | None:intergenic | 55.0% | |
| AAGCAACCTGGTTGTCTCGG+AGG | + | chr6_1:27615411-27615430 | Msa0880750:CDS | 55.0% | |
| AAGAAGGGAACCAGCCCATG+GGG | - | chr6_1:27615470-27615489 | None:intergenic | 55.0% | |
| GAAGAAGGGAACCAGCCCAT+GGG | - | chr6_1:27615471-27615490 | None:intergenic | 55.0% | |
| GAAGAGGTGGGTGACTTCGT+TGG | - | chr6_1:27615565-27615584 | None:intergenic | 55.0% | |
| ACGAAGTCACCCACCTCTTC+TGG | + | chr6_1:27615565-27615584 | Msa0880750:CDS | 55.0% | |
| CGAAGTCACCCACCTCTTCT+GGG | + | chr6_1:27615566-27615585 | Msa0880750:CDS | 55.0% | |
| GAACGTCACCCAGAAGAGGT+GGG | - | chr6_1:27615577-27615596 | None:intergenic | 55.0% | |
| ACTGGAACGTCACCCAGAAG+AGG | - | chr6_1:27615581-27615600 | None:intergenic | 55.0% | |
| GGTGACAACGTTGAGGAGCA+TGG | - | chr6_1:27615643-27615662 | None:intergenic | 55.0% | |
| ATGGGCGAGAGGAGAAGATG+GGG | - | chr6_1:27615679-27615698 | None:intergenic | 55.0% | |
| TGGACCGTTATATGGGCGAG+AGG | - | chr6_1:27615690-27615709 | None:intergenic | 55.0% | |
| GTCCGATATATGACCCGGTC+CGG | + | chr6_1:27615733-27615752 | Msa0880750:CDS | 55.0% | |
| GACCGGACCGGGTCATATAT+CGG | - | chr6_1:27615738-27615757 | None:intergenic | 55.0% | |
| GCTGCCATATGTCGCCATGT+AGG | + | chr6_1:27615954-27615973 | Msa0880750:CDS | 55.0% | |
| GTTGATGCGTGACAAGGGTG+AGG | + | chr6_1:27616217-27616236 | Msa0880750:CDS | 55.0% | |
| TGCGTGACAAGGGTGAGGTT+TGG | + | chr6_1:27616222-27616241 | Msa0880750:CDS | 55.0% | |
| GCGTGACAAGGGTGAGGTTT+GGG | + | chr6_1:27616223-27616242 | Msa0880750:CDS | 55.0% | |
| AACGTTGGGTGGCTAAGCTG+AGG | + | chr6_1:27616411-27616430 | Msa0880750:CDS | 55.0% | |
| ACGTTGGGTGGCTAAGCTGA+GGG | + | chr6_1:27616412-27616431 | Msa0880750:CDS | 55.0% | |
| GTCGGAGTTACGGGAATGGT+TGG | + | chr6_1:27615366-27615385 | Msa0880750:CDS | 55.0% | |
| GTTGCTTCAAGGCTTCGGCT+AGG | - | chr6_1:27615398-27615417 | None:intergenic | 55.0% | |
| AAGCAACCTGGTTGTCTCGG+AGG | + | chr6_1:27615411-27615430 | Msa0880750:CDS | 55.0% | |
| AAGAAGGGAACCAGCCCATG+GGG | - | chr6_1:27615470-27615489 | None:intergenic | 55.0% | |
| GAAGAAGGGAACCAGCCCAT+GGG | - | chr6_1:27615471-27615490 | None:intergenic | 55.0% | |
| GAAGAGGTGGGTGACTTCGT+TGG | - | chr6_1:27615565-27615584 | None:intergenic | 55.0% | |
| ACGAAGTCACCCACCTCTTC+TGG | + | chr6_1:27615565-27615584 | Msa0880750:CDS | 55.0% | |
| CGAAGTCACCCACCTCTTCT+GGG | + | chr6_1:27615566-27615585 | Msa0880750:CDS | 55.0% | |
| GAACGTCACCCAGAAGAGGT+GGG | - | chr6_1:27615577-27615596 | None:intergenic | 55.0% | |
| ACTGGAACGTCACCCAGAAG+AGG | - | chr6_1:27615581-27615600 | None:intergenic | 55.0% | |
| GGTGACAACGTTGAGGAGCA+TGG | - | chr6_1:27615643-27615662 | None:intergenic | 55.0% | |
| ATGGGCGAGAGGAGAAGATG+GGG | - | chr6_1:27615679-27615698 | None:intergenic | 55.0% | |
| TGGACCGTTATATGGGCGAG+AGG | - | chr6_1:27615690-27615709 | None:intergenic | 55.0% | |
| GTCCGATATATGACCCGGTC+CGG | + | chr6_1:27615733-27615752 | Msa0880750:CDS | 55.0% | |
| GACCGGACCGGGTCATATAT+CGG | - | chr6_1:27615738-27615757 | None:intergenic | 55.0% | |
| GCTGCCATATGTCGCCATGT+AGG | + | chr6_1:27615954-27615973 | Msa0880750:CDS | 55.0% | |
| GTTGATGCGTGACAAGGGTG+AGG | + | chr6_1:27616217-27616236 | Msa0880750:CDS | 55.0% | |
| TGCGTGACAAGGGTGAGGTT+TGG | + | chr6_1:27616222-27616241 | Msa0880750:CDS | 55.0% | |
| GCGTGACAAGGGTGAGGTTT+GGG | + | chr6_1:27616223-27616242 | Msa0880750:CDS | 55.0% | |
| AACGTTGGGTGGCTAAGCTG+AGG | + | chr6_1:27616411-27616430 | Msa0880750:CDS | 55.0% | |
| ACGTTGGGTGGCTAAGCTGA+GGG | + | chr6_1:27616412-27616431 | Msa0880750:CDS | 55.0% | |
| GCCGAAGCCTTGAAGCAACC+TGG | + | chr6_1:27615399-27615418 | Msa0880750:CDS | 60.0% | |
| AGAAGGGAACCAGCCCATGG+GGG | - | chr6_1:27615469-27615488 | None:intergenic | 60.0% | |
| GGAAGAAGGGAACCAGCCCA+TGG | - | chr6_1:27615472-27615491 | None:intergenic | 60.0% | |
| GGAACGTCACCCAGAAGAGG+TGG | - | chr6_1:27615578-27615597 | None:intergenic | 60.0% | |
| GGGTTACCGTTTCGGTACCC+AGG | + | chr6_1:27615975-27615994 | Msa0880750:CDS | 60.0% | |
| GCCGAAGCCTTGAAGCAACC+TGG | + | chr6_1:27615399-27615418 | Msa0880750:CDS | 60.0% | |
| AGAAGGGAACCAGCCCATGG+GGG | - | chr6_1:27615469-27615488 | None:intergenic | 60.0% | |
| GGAAGAAGGGAACCAGCCCA+TGG | - | chr6_1:27615472-27615491 | None:intergenic | 60.0% | |
| GGAACGTCACCCAGAAGAGG+TGG | - | chr6_1:27615578-27615597 | None:intergenic | 60.0% | |
| GGGTTACCGTTTCGGTACCC+AGG | + | chr6_1:27615975-27615994 | Msa0880750:CDS | 60.0% | |
| CATGGGCCTCCGAGACAACC+AGG | - | chr6_1:27615420-27615439 | None:intergenic | 65.0% | |
| CTGGTTGTCTCGGAGGCCCA+TGG | + | chr6_1:27615418-27615437 | Msa0880750:CDS | 65.0% | |
| TTGTGCTCGCCGTTCCCCCA+TGG | + | chr6_1:27615452-27615471 | Msa0880750:CDS | 65.0% | |
| TGTGCTCGCCGTTCCCCCAT+GGG | + | chr6_1:27615453-27615472 | Msa0880750:CDS | 65.0% | |
| GGAACCAGCCCATGGGGGAA+CGG | - | chr6_1:27615464-27615483 | None:intergenic | 65.0% | |
| CATGGGCCTCCGAGACAACC+AGG | - | chr6_1:27615420-27615439 | None:intergenic | 65.0% | |
| CTGGTTGTCTCGGAGGCCCA+TGG | + | chr6_1:27615418-27615437 | Msa0880750:CDS | 65.0% | |
| TTGTGCTCGCCGTTCCCCCA+TGG | + | chr6_1:27615452-27615471 | Msa0880750:CDS | 65.0% | |
| TGTGCTCGCCGTTCCCCCAT+GGG | + | chr6_1:27615453-27615472 | Msa0880750:CDS | 65.0% | |
| GGAACCAGCCCATGGGGGAA+CGG | - | chr6_1:27615464-27615483 | None:intergenic | 65.0% | |
| CTCGCCGTTCCCCCATGGGC+TGG | + | chr6_1:27615457-27615476 | Msa0880750:CDS | 75.0% | |
| CTCGCCGTTCCCCCATGGGC+TGG | + | chr6_1:27615457-27615476 | Msa0880750:CDS | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr6_1 | gene | 27615336 | 27616466 | 27615336 | ID=Msa0880750;Name=Msa0880750 |
| chr6_1 | mRNA | 27615336 | 27616466 | 27615336 | ID=Msa0880750-mRNA-1;Parent=Msa0880750;Name=Msa0880750-mRNA-1;_AED=0.33;_eAED=0.33;_QI=0|-1|0|1|-1|1|1|0|376 |
| chr6_1 | exon | 27615336 | 27616466 | 27615336 | ID=Msa0880750-mRNA-1:exon:6801;Parent=Msa0880750-mRNA-1 |
| chr6_1 | CDS | 27615336 | 27616466 | 27615336 | ID=Msa0880750-mRNA-1:cds;Parent=Msa0880750-mRNA-1 |
| Gene Sequence |
| Protein sequence |
