Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0761420 | XP_003612958.1 | 96.067 | 178 | 7 | 0 | 1 | 178 | 62 | 239 | 3.30e-121 | 352 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0761420 | sp|Q38840|AGL17_ARATH | 52.000 | 175 | 74 | 3 | 1 | 174 | 62 | 227 | 3.42e-53 | 172 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0761420 | A9YWS1 | 96.067 | 178 | 7 | 0 | 1 | 178 | 62 | 239 | 1.58e-121 | 352 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0010150 | Msa0761420 | 0.855731 | 5.181968e-62 | -8.615850e-47 |
| Msa0040210 | Msa0761420 | 0.808083 | 3.686407e-50 | -8.615850e-47 |
| Msa0046390 | Msa0761420 | 0.803527 | 3.341154e-49 | -8.615850e-47 |
| Msa0059880 | Msa0761420 | 0.823442 | 1.382428e-53 | -8.615850e-47 |
| Msa0064990 | Msa0761420 | 0.813608 | 2.348657e-51 | -8.615850e-47 |
| Msa0065590 | Msa0761420 | 0.804487 | 2.109846e-49 | -8.615850e-47 |
| Msa0072940 | Msa0761420 | 0.808133 | 3.597820e-50 | -8.615850e-47 |
| Msa0074620 | Msa0761420 | 0.805233 | 1.473944e-49 | -8.615850e-47 |
| Msa0095910 | Msa0761420 | 0.807856 | 4.119947e-50 | -8.615850e-47 |
| Msa0111040 | Msa0761420 | 0.804480 | 2.117086e-49 | -8.615850e-47 |
| Msa0606600 | Msa0761420 | 0.802843 | 4.627817e-49 | -8.615850e-47 |
| Msa0609460 | Msa0761420 | 0.815599 | 8.510357e-52 | -8.615850e-47 |
| Msa0631700 | Msa0761420 | 0.852696 | 3.896093e-61 | -8.615850e-47 |
| Msa0634290 | Msa0761420 | 0.819437 | 1.162098e-52 | -8.615850e-47 |
| Msa0650100 | Msa0761420 | 0.806785 | 6.950630e-50 | -8.615850e-47 |
| Msa0665830 | Msa0761420 | 0.804205 | 2.415361e-49 | -8.615850e-47 |
| Msa0670360 | Msa0761420 | 0.856416 | 3.266325e-62 | -8.615850e-47 |
| Msa0671640 | Msa0761420 | 0.814624 | 1.401597e-51 | -8.615850e-47 |
| Msa0685080 | Msa0761420 | 0.802683 | 4.993647e-49 | -8.615850e-47 |
| Msa0701430 | Msa0761420 | 0.810833 | 9.469602e-51 | -8.615850e-47 |
| Msa0708680 | Msa0761420 | 0.834426 | 3.017454e-56 | -8.615850e-47 |
| Msa0720490 | Msa0761420 | 0.804412 | 2.187038e-49 | -8.615850e-47 |
| Msa0720870 | Msa0761420 | 0.917102 | 7.988804e-86 | -8.615850e-47 |
| Msa0728210 | Msa0761420 | 0.818448 | 1.949522e-52 | -8.615850e-47 |
| Msa0761420 | Msa0768670 | 0.805129 | 1.549733e-49 | -8.615850e-47 |
| Msa0761420 | Msa0782590 | 0.831667 | 1.466255e-55 | -8.615850e-47 |
| Msa0761420 | Msa0786940 | 0.801098 | 1.056673e-48 | -8.615850e-47 |
| Msa0761420 | Msa0789410 | 0.809981 | 1.446286e-50 | -8.615850e-47 |
| Msa0761420 | Msa0798840 | 0.806328 | 8.675062e-50 | -8.615850e-47 |
| Msa0761420 | Msa0803940 | 0.863270 | 2.805826e-64 | -8.615850e-47 |
| Msa0761420 | Msa0806930 | 0.814643 | 1.387565e-51 | -8.615850e-47 |
| Msa0761420 | Msa0814160 | 0.816582 | 5.134851e-52 | -8.615850e-47 |
| Msa0761420 | Msa0822410 | 0.819502 | 1.123182e-52 | -8.615850e-47 |
| Msa0761420 | Msa0826360 | 0.801327 | 9.487150e-49 | -8.615850e-47 |
| Msa0761420 | Msa0831890 | 0.809105 | 2.230588e-50 | -8.615850e-47 |
| Msa0761420 | Msa0841670 | 0.811403 | 7.124303e-51 | -8.615850e-47 |
| Msa0761420 | Msa0842000 | 0.828984 | 6.633256e-55 | -8.615850e-47 |
| Msa0761420 | Msa0854840 | 0.810374 | 1.189966e-50 | -8.615850e-47 |
| Msa0761420 | Msa0861730 | 0.825186 | 5.378056e-54 | -8.615850e-47 |
| Msa0761420 | Msa0863840 | 0.807003 | 6.249590e-50 | -8.615850e-47 |
| Msa0761420 | Msa0863850 | 0.810316 | 1.224668e-50 | -8.615850e-47 |
| Msa0761420 | Msa0880750 | 0.808930 | 2.431280e-50 | -8.615850e-47 |
| Msa0761420 | Msa0896920 | 0.841512 | 4.541860e-58 | -8.615850e-47 |
| Msa0761420 | Msa0935440 | 0.813765 | 2.169194e-51 | -8.615850e-47 |
| Msa0761420 | Msa0940780 | 0.814083 | 1.845364e-51 | -8.615850e-47 |
| Msa0761420 | Msa0946010 | 0.807850 | 4.132142e-50 | -8.615850e-47 |
| Msa0761420 | Msa0972370 | 0.801858 | 7.382964e-49 | -8.615850e-47 |
| Msa0761420 | Msa0996980 | 0.832025 | 1.196294e-55 | -8.615850e-47 |
| Msa0761420 | Msa1006170 | 0.835796 | 1.361756e-56 | -8.615850e-47 |
| Msa0761420 | Msa1022490 | 0.878713 | 2.247458e-69 | -8.615850e-47 |
| Msa0761420 | Msa1022510 | 0.878842 | 2.024284e-69 | -8.615850e-47 |
| Msa0761420 | Msa1024350 | 0.807134 | 5.861666e-50 | -8.615850e-47 |
| Msa0761420 | Msa1030320 | 0.828076 | 1.099178e-54 | -8.615850e-47 |
| Msa0761420 | Msa1048350 | 0.807416 | 5.108513e-50 | -8.615850e-47 |
| Msa0761420 | Msa1061670 | 0.824566 | 7.531356e-54 | -8.615850e-47 |
| Msa0761420 | Msa1063210 | 0.814990 | 1.162709e-51 | -8.615850e-47 |
| Msa0761420 | Msa1064940 | 0.836434 | 9.380923e-57 | -8.615850e-47 |
| Msa0761420 | Msa1068080 | 0.800340 | 1.509234e-48 | -8.615850e-47 |
| Msa0761420 | Msa1087370 | 0.815974 | 7.020067e-52 | -8.615850e-47 |
| Msa0761420 | Msa1087380 | 0.833408 | 5.424531e-56 | -8.615850e-47 |
| Msa0761420 | Msa1106680 | 0.870799 | 1.110435e-66 | -8.615850e-47 |
| Msa0761420 | Msa1106960 | 0.823183 | 1.588454e-53 | -8.615850e-47 |
| Msa0761420 | Msa1108560 | 0.806850 | 6.733135e-50 | -8.615850e-47 |
| Msa0761420 | Msa1138110 | 0.803249 | 3.814395e-49 | -8.615850e-47 |
| Msa0761420 | Msa1142600 | 0.807194 | 5.694584e-50 | -8.615850e-47 |
| Msa0761420 | Msa1143250 | 0.806008 | 1.013145e-49 | -8.615850e-47 |
| Msa0761420 | Msa1147030 | 0.821968 | 3.043974e-53 | -8.615850e-47 |
| Msa0761420 | Msa1148210 | 0.817603 | 3.027390e-52 | -8.615850e-47 |
| Msa0761420 | Msa1152310 | 0.803585 | 3.249059e-49 | -8.615850e-47 |
| Msa0761420 | Msa1153690 | 0.812363 | 4.403005e-51 | -8.615850e-47 |
| Msa0761420 | Msa1156240 | 0.805604 | 1.232105e-49 | -8.615850e-47 |
| Msa0761420 | Msa1157210 | 0.827537 | 1.480975e-54 | -8.615850e-47 |
| Msa0761420 | Msa1162430 | 0.808592 | 2.871104e-50 | -8.615850e-47 |
| Msa0761420 | Msa1162750 | 0.817035 | 4.063383e-52 | -8.615850e-47 |
| Msa0761420 | Msa1170340 | 0.840197 | 1.005026e-57 | -8.615850e-47 |
| Msa0761420 | Msa1181090 | 0.817770 | 2.775582e-52 | -8.615850e-47 |
| Msa0761420 | Msa1186340 | 0.853604 | 2.140649e-61 | -8.615850e-47 |
| Msa0761420 | Msa1191350 | 0.830491 | 2.849691e-55 | -8.615850e-47 |
| Msa0761420 | Msa1218520 | 0.804913 | 1.718889e-49 | -8.615850e-47 |
| Msa0761420 | Msa1226210 | 0.809574 | 1.769562e-50 | -8.615850e-47 |
| Msa0761420 | Msa1238250 | 0.824265 | 8.866192e-54 | -8.615850e-47 |
| Msa0761420 | Msa1240710 | 0.813753 | 2.181626e-51 | -8.615850e-47 |
| Msa0761420 | Msa1245800 | 0.814097 | 1.832051e-51 | -8.615850e-47 |
| Msa0761420 | Msa1267990 | 0.860871 | 1.526469e-63 | -8.615850e-47 |
| Msa0761420 | Msa1281300 | 0.813904 | 2.020897e-51 | -8.615850e-47 |
| Msa0761420 | Msa1309040 | 0.818270 | 2.140006e-52 | -8.615850e-47 |
| Msa0761420 | Msa1319030 | 0.835683 | 1.455149e-56 | -8.615850e-47 |
| Msa0761420 | Msa1319190 | 0.835824 | 1.340033e-56 | -8.615850e-47 |
| Msa0761420 | Msa1321970 | 0.862542 | 4.708502e-64 | -8.615850e-47 |
| Msa0761420 | Msa1322500 | 0.819178 | 1.331025e-52 | -8.615850e-47 |
| Msa0761420 | Msa1341030 | 0.805725 | 1.162296e-49 | -8.615850e-47 |
| Msa0761420 | Msa1343590 | 0.809969 | 1.454952e-50 | -8.615850e-47 |
| Msa0761420 | Msa1355340 | 0.817017 | 4.101488e-52 | -8.615850e-47 |
| Msa0761420 | Msa1411550 | 0.829327 | 5.478039e-55 | -8.615850e-47 |
| Msa0761420 | Msa1419390 | 0.810796 | 9.647164e-51 | -8.615850e-47 |
| Msa0761420 | Msa1436540 | 0.803657 | 3.139536e-49 | -8.615850e-47 |
| Msa0761420 | Msa1459610 | 0.806157 | 9.426948e-50 | -8.615850e-47 |
| Msa0134570 | Msa0761420 | 0.827809 | 1.274557e-54 | -8.615850e-47 |
| Msa0142560 | Msa0761420 | 0.808320 | 3.282623e-50 | -8.615850e-47 |
| Msa0150910 | Msa0761420 | 0.841251 | 5.321725e-58 | -8.615850e-47 |
| Msa0150920 | Msa0761420 | 0.839076 | 1.966989e-57 | -8.615850e-47 |
| Msa0177550 | Msa0761420 | 0.833250 | 5.940263e-56 | -8.615850e-47 |
| Msa0190670 | Msa0761420 | 0.822900 | 1.848965e-53 | -8.615850e-47 |
| Msa0194230 | Msa0761420 | 0.803773 | 2.970491e-49 | -8.615850e-47 |
| Msa0195580 | Msa0761420 | 0.806320 | 8.710275e-50 | -8.615850e-47 |
| Msa0207640 | Msa0761420 | 0.820316 | 7.316440e-53 | -8.615850e-47 |
| Msa0209520 | Msa0761420 | 0.803429 | 3.500611e-49 | -8.615850e-47 |
| Msa0212550 | Msa0761420 | 0.818828 | 1.599069e-52 | -8.615850e-47 |
| Msa0366510 | Msa0761420 | 0.816940 | 4.267999e-52 | -8.615850e-47 |
| Msa0374040 | Msa0761420 | 0.874872 | 4.807073e-68 | -8.615850e-47 |
| Msa0380110 | Msa0761420 | 0.802987 | 4.322419e-49 | -8.615850e-47 |
| Msa0390160 | Msa0761420 | 0.800312 | 1.528584e-48 | -8.615850e-47 |
| Msa0390170 | Msa0761420 | 0.816822 | 4.536253e-52 | -8.615850e-47 |
| Msa0396700 | Msa0761420 | 0.825008 | 5.923343e-54 | -8.615850e-47 |
| Msa0401440 | Msa0761420 | 0.808072 | 3.707307e-50 | -8.615850e-47 |
| Msa0409500 | Msa0761420 | 0.824527 | 7.690732e-54 | -8.615850e-47 |
| Msa0409530 | Msa0761420 | 0.803478 | 3.420322e-49 | -8.615850e-47 |
| Msa0414480 | Msa0761420 | 0.825244 | 5.210054e-54 | -8.615850e-47 |
| Msa0423200 | Msa0761420 | 0.803237 | 3.837371e-49 | -8.615850e-47 |
| Msa0423220 | Msa0761420 | 0.821831 | 3.275425e-53 | -8.615850e-47 |
| Msa0430320 | Msa0761420 | 0.803852 | 2.859893e-49 | -8.615850e-47 |
| Msa0443040 | Msa0761420 | 0.800288 | 1.546478e-48 | -8.615850e-47 |
| Msa0444210 | Msa0761420 | 0.801532 | 8.612273e-49 | -8.615850e-47 |
| Msa0444230 | Msa0761420 | 0.802944 | 4.410285e-49 | -8.615850e-47 |
| Msa0444250 | Msa0761420 | 0.801050 | 1.080790e-48 | -8.615850e-47 |
| Msa0464310 | Msa0761420 | 0.825547 | 4.416177e-54 | -8.615850e-47 |
| Msa0469450 | Msa0761420 | 0.825280 | 5.109134e-54 | -8.615850e-47 |
| Msa0469460 | Msa0761420 | 0.830068 | 3.616066e-55 | -8.615850e-47 |
| Msa0240990 | Msa0761420 | 0.805063 | 1.599133e-49 | -8.615850e-47 |
| Msa0242720 | Msa0761420 | 0.812054 | 5.140960e-51 | -8.615850e-47 |
| Msa0248320 | Msa0761420 | 0.812249 | 4.662252e-51 | -8.615850e-47 |
| Msa0252930 | Msa0761420 | 0.813828 | 2.100848e-51 | -8.615850e-47 |
| Msa0274250 | Msa0761420 | 0.822757 | 1.997136e-53 | -8.615850e-47 |
| Msa0274260 | Msa0761420 | 0.821162 | 4.674440e-53 | -8.615850e-47 |
| Msa0278460 | Msa0761420 | 0.810874 | 9.278669e-51 | -8.615850e-47 |
| Msa0281190 | Msa0761420 | 0.805677 | 1.189489e-49 | -8.615850e-47 |
| Msa0287720 | Msa0761420 | 0.822128 | 2.795671e-53 | -8.615850e-47 |
| Msa0288540 | Msa0761420 | 0.805885 | 1.075658e-49 | -8.615850e-47 |
| Msa0303900 | Msa0761420 | 0.816917 | 4.318823e-52 | -8.615850e-47 |
| Msa0328090 | Msa0761420 | 0.826078 | 3.304261e-54 | -8.615850e-47 |
| Msa0333770 | Msa0761420 | 0.801580 | 8.420366e-49 | -8.615850e-47 |
| Msa0346170 | Msa0761420 | 0.801537 | 8.593912e-49 | -8.615850e-47 |
| Msa0348370 | Msa0761420 | 0.844328 | 8.093631e-59 | -8.615850e-47 |
| Msa0349910 | Msa0761420 | 0.821422 | 4.071608e-53 | -8.615850e-47 |
| Msa0354550 | Msa0761420 | 0.818432 | 1.966502e-52 | -8.615850e-47 |
| Msa0490060 | Msa0761420 | 0.833840 | 4.232773e-56 | -8.615850e-47 |
| Msa0491780 | Msa0761420 | 0.835224 | 1.900160e-56 | -8.615850e-47 |
| Msa0491800 | Msa0761420 | 0.819994 | 8.667840e-53 | -8.615850e-47 |
| Msa0496060 | Msa0761420 | 0.814644 | 1.386945e-51 | -8.615850e-47 |
| Msa0496070 | Msa0761420 | 0.832972 | 6.967367e-56 | -8.615850e-47 |
| Msa0501080 | Msa0761420 | 0.806313 | 8.740433e-50 | -8.615850e-47 |
| Msa0502940 | Msa0761420 | 0.823561 | 1.296671e-53 | -8.615850e-47 |
| Msa0502970 | Msa0761420 | 0.801496 | 8.760586e-49 | -8.615850e-47 |
| Msa0507600 | Msa0761420 | 0.807198 | 5.683843e-50 | -8.615850e-47 |
| Msa0515130 | Msa0761420 | 0.878071 | 3.775811e-69 | -8.615850e-47 |
| Msa0515150 | Msa0761420 | 0.867327 | 1.485006e-65 | -8.615850e-47 |
| Msa0516110 | Msa0761420 | 0.800962 | 1.126522e-48 | -8.615850e-47 |
| Msa0530990 | Msa0761420 | 0.800152 | 1.648296e-48 | -8.615850e-47 |
| Msa0535570 | Msa0761420 | 0.857004 | 2.192043e-62 | -8.615850e-47 |
| Msa0538440 | Msa0761420 | 0.805190 | 1.504430e-49 | -8.615850e-47 |
| Msa0538530 | Msa0761420 | 0.801725 | 7.864324e-49 | -8.615850e-47 |
| Msa0543740 | Msa0761420 | 0.809078 | 2.260534e-50 | -8.615850e-47 |
| Msa0554660 | Msa0761420 | 0.809106 | 2.229123e-50 | -8.615850e-47 |
| Msa0555920 | Msa0761420 | 0.806530 | 7.866697e-50 | -8.615850e-47 |
| Msa0568780 | Msa0761420 | -0.807476 | 4.962002e-50 | -8.615850e-47 |
| Msa0580100 | Msa0761420 | 0.802835 | 4.646777e-49 | -8.615850e-47 |
| Msa0587870 | Msa0761420 | 0.806233 | 9.084615e-50 | -8.615850e-47 |
| Msa0591490 | Msa0761420 | 0.873608 | 1.288778e-67 | -8.615850e-47 |
| Msa0593870 | Msa0761420 | 0.802489 | 5.475415e-49 | -8.615850e-47 |
| Msa0594330 | Msa0761420 | 0.809217 | 2.110632e-50 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0761420 | MtrunA17_Chr5g0411691 | 96.067 | 178 | 7 | 0 | 1 | 178 | 62 | 239 | 3.04e-125 | 352 |
| Msa0761420 | MtrunA17_Chr2g0279821 | 55.429 | 175 | 68 | 3 | 1 | 172 | 62 | 229 | 1.46e-56 | 177 |
| Msa0761420 | MtrunA17_Chr5g0427961 | 52.841 | 176 | 62 | 5 | 1 | 174 | 6 | 162 | 1.63e-51 | 162 |
| Msa0761420 | MtrunA17_Chr4g0049541 | 44.242 | 165 | 85 | 2 | 1 | 164 | 62 | 220 | 3.33e-38 | 130 |
| Msa0761420 | MtrunA17_Chr2g0284911 | 36.364 | 110 | 68 | 1 | 1 | 108 | 77 | 186 | 9.75e-15 | 70.1 |
| Msa0761420 | MtrunA17_Chr8g0380021 | 35.455 | 110 | 69 | 1 | 1 | 108 | 78 | 187 | 6.91e-14 | 67.4 |
| Msa0761420 | MtrunA17_Chr4g0061691 | 34.951 | 103 | 65 | 1 | 1 | 101 | 63 | 165 | 4.33e-12 | 62.4 |
| Msa0761420 | MtrunA17_Chr3g0077501 | 34.234 | 111 | 71 | 1 | 1 | 109 | 62 | 172 | 5.17e-12 | 62.0 |
| Msa0761420 | MtrunA17_Chr2g0308271 | 33.636 | 110 | 71 | 1 | 1 | 108 | 34 | 143 | 6.74e-12 | 61.6 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0761420 | AT2G22630.1 | 52.000 | 175 | 74 | 3 | 1 | 174 | 62 | 227 | 3.48e-54 | 172 |
| Msa0761420 | AT2G22630.2 | 52.000 | 175 | 74 | 3 | 1 | 174 | 62 | 227 | 3.48e-54 | 172 |
| Msa0761420 | AT4G37940.2 | 51.705 | 176 | 74 | 3 | 1 | 175 | 1 | 166 | 3.77e-53 | 167 |
| Msa0761420 | AT4G37940.1 | 51.705 | 176 | 74 | 3 | 1 | 175 | 62 | 227 | 2.66e-52 | 167 |
| Msa0761420 | AT3G57230.1 | 50.857 | 175 | 79 | 5 | 1 | 174 | 62 | 230 | 1.40e-49 | 160 |
| Msa0761420 | AT3G57230.4 | 50.857 | 175 | 79 | 5 | 1 | 174 | 62 | 230 | 1.40e-49 | 160 |
| Msa0761420 | AT3G57230.5 | 62.602 | 123 | 45 | 1 | 1 | 122 | 28 | 150 | 1.64e-49 | 159 |
| Msa0761420 | AT3G57230.3 | 62.602 | 123 | 45 | 1 | 1 | 122 | 28 | 150 | 1.64e-49 | 159 |
| Msa0761420 | AT4G37940.4 | 46.591 | 176 | 69 | 3 | 1 | 175 | 62 | 213 | 3.30e-41 | 138 |
| Msa0761420 | AT2G14210.1 | 49.390 | 164 | 76 | 4 | 1 | 163 | 63 | 220 | 5.77e-35 | 122 |
| Msa0761420 | AT2G14210.2 | 49.390 | 164 | 76 | 4 | 1 | 163 | 63 | 220 | 7.91e-35 | 122 |
| Msa0761420 | AT4G37940.3 | 67.500 | 80 | 25 | 1 | 1 | 79 | 62 | 141 | 7.17e-31 | 110 |
| Msa0761420 | AT3G57230.2 | 63.095 | 84 | 30 | 1 | 1 | 83 | 62 | 145 | 4.00e-29 | 105 |
| Msa0761420 | AT4G09960.1 | 32.168 | 143 | 94 | 2 | 1 | 140 | 62 | 204 | 5.86e-15 | 70.5 |
| Msa0761420 | AT4G09960.6 | 32.168 | 143 | 94 | 2 | 1 | 140 | 63 | 205 | 6.20e-15 | 70.5 |
| Msa0761420 | AT4G09960.5 | 32.168 | 143 | 94 | 2 | 1 | 140 | 72 | 214 | 6.39e-15 | 70.5 |
| Msa0761420 | AT4G09960.3 | 32.168 | 143 | 94 | 2 | 1 | 140 | 88 | 230 | 8.22e-15 | 70.5 |
| Msa0761420 | AT2G42830.1 | 29.480 | 173 | 98 | 5 | 1 | 165 | 77 | 233 | 1.53e-14 | 69.7 |
| Msa0761420 | AT2G42830.2 | 29.143 | 175 | 98 | 5 | 1 | 165 | 77 | 235 | 1.70e-14 | 69.7 |
| Msa0761420 | AT4G18960.1 | 35.455 | 110 | 69 | 1 | 1 | 108 | 78 | 187 | 7.48e-14 | 67.8 |
| Msa0761420 | AT4G18960.4 | 35.714 | 112 | 70 | 1 | 1 | 110 | 64 | 175 | 7.91e-14 | 66.6 |
| Msa0761420 | AT4G18960.3 | 35.455 | 110 | 69 | 1 | 1 | 108 | 64 | 173 | 8.51e-14 | 67.4 |
| Msa0761420 | AT4G18960.2 | 35.455 | 110 | 69 | 1 | 1 | 108 | 64 | 173 | 8.51e-14 | 67.4 |
| Msa0761420 | AT4G09960.4 | 33.108 | 148 | 88 | 4 | 1 | 139 | 157 | 302 | 7.30e-13 | 65.9 |
| Msa0761420 | AT1G26310.1 | 32.800 | 125 | 76 | 3 | 1 | 117 | 63 | 187 | 5.98e-12 | 62.8 |
| Msa0761420 | AT4G09960.2 | 31.469 | 143 | 81 | 3 | 1 | 140 | 62 | 190 | 6.10e-12 | 62.0 |
| Msa0761420 | AT5G60910.2 | 24.571 | 175 | 120 | 3 | 1 | 163 | 1 | 175 | 9.11e-12 | 60.8 |
| Msa0761420 | AT2G45650.1 | 35.106 | 94 | 60 | 1 | 1 | 93 | 62 | 155 | 1.69e-11 | 61.2 |
| Msa0761420 | AT1G69120.3 | 32.727 | 110 | 72 | 2 | 1 | 108 | 1 | 110 | 1.89e-11 | 60.5 |
| Msa0761420 | AT5G60910.1 | 24.571 | 175 | 120 | 3 | 1 | 163 | 63 | 237 | 2.15e-11 | 60.8 |
| Msa0761420 | AT1G69120.2 | 32.727 | 110 | 72 | 2 | 1 | 108 | 63 | 172 | 3.44e-11 | 60.5 |
| Msa0761420 | AT1G69120.1 | 32.727 | 110 | 72 | 2 | 1 | 108 | 63 | 172 | 3.89e-11 | 60.5 |
| Msa0761420 | AT3G61120.1 | 36.667 | 90 | 57 | 0 | 4 | 93 | 65 | 154 | 3.91e-11 | 60.1 |
| Msa0761420 | AT3G58780.5 | 31.250 | 112 | 71 | 2 | 1 | 108 | 83 | 192 | 6.67e-11 | 59.7 |
| Msa0761420 | AT3G58780.1 | 31.250 | 112 | 71 | 2 | 1 | 108 | 77 | 186 | 7.37e-11 | 59.7 |
Find 33 sgRNAs with CRISPR-Local
Find 246 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TTGATGGGAGAACAGCTTTA+TGG | 0.252080 | 5_2:+18696730 | Msa0761420:CDS |
| GTTGACTCTCTAGGTCTTGT+AGG | 0.264680 | 5_2:-18696768 | None:intergenic |
| CATACCTTGACTTCAGATTC+TGG | 0.269362 | 5_2:-18695844 | None:intergenic |
| ATTCTGGATTTGTCCCTTGT+TGG | 0.336243 | 5_2:-18695828 | None:intergenic |
| AAACACACAACTACACAAAA+AGG | 0.340273 | 5_2:+18697266 | Msa0761420:CDS |
| TTACCTTTCGGTTCAGCTCT+TGG | 0.342679 | 5_2:-18697094 | None:intergenic |
| CCAAGGAGTTCGCATGAAAA+AGG | 0.352891 | 5_2:+18696804 | Msa0761420:CDS |
| CAATTTCCATACGGTGTTCA+TGG | 0.363241 | 5_2:+18697654 | Msa0761420:CDS |
| TTGAGCTCATAGGCAATTGA+TGG | 0.413072 | 5_2:+18696714 | Msa0761420:intron |
| CACAGTATTCTTGCTCAGGC+TGG | 0.437836 | 5_2:-18697719 | None:intergenic |
| TGAAGTTGAAATAATGTTTG+TGG | 0.440444 | 5_2:-18697690 | None:intergenic |
| GTCTCACAGTATTCTTGCTC+AGG | 0.441710 | 5_2:-18697723 | None:intergenic |
| ACAGGGAAACATAATCCATC+AGG | 0.520605 | 5_2:+18697200 | Msa0761420:intron |
| CATAATCCATCAGGAAAATG+TGG | 0.527713 | 5_2:+18697209 | Msa0761420:CDS |
| ACAAGACCTAGAGAGTCAAC+TGG | 0.528351 | 5_2:+18696771 | Msa0761420:CDS |
| CCATACGGTGTTCATGGAGG+AGG | 0.529836 | 5_2:+18697660 | Msa0761420:CDS |
| ATGTGAATGTCGTAGGTGTA+TGG | 0.531082 | 5_2:+18697585 | Msa0761420:intron |
| CCTCCTCCATGAACACCGTA+TGG | 0.536688 | 5_2:-18697660 | None:intergenic |
| TAAGTTCCAGTTGACTCTCT+AGG | 0.537150 | 5_2:-18696777 | None:intergenic |
| TGAGCTCATAGGCAATTGAT+GGG | 0.547567 | 5_2:+18696715 | Msa0761420:intron |
| CAAGAATACTGTGAGACCTC+AGG | 0.553688 | 5_2:+18697729 | Msa0761420:CDS |
| AAATGTGGAGCTCTATAAGA+AGG | 0.555562 | 5_2:+18697224 | Msa0761420:CDS |
| GCATTTGTTCAATTTCCATA+CGG | 0.559750 | 5_2:+18697645 | Msa0761420:CDS |
| TGTTGCACTTGCACTGCCTG+AGG | 0.561931 | 5_2:-18697745 | None:intergenic |
| AAATCCAGAATCTGAAGTCA+AGG | 0.573093 | 5_2:+18695840 | Msa0761420:CDS |
| AAAGTCTACAAGAAAACCAT+AGG | 0.574987 | 5_2:+18696612 | Msa0761420:CDS |
| CAACTGGAACTTAGCCTCCA+AGG | 0.576707 | 5_2:+18696787 | Msa0761420:CDS |
| TGAGAGATATAACATTTGCA+AGG | 0.603510 | 5_2:+18695801 | Msa0761420:CDS |
| AATCCAAGAGCTGAACCGAA+AGG | 0.649030 | 5_2:+18697091 | Msa0761420:CDS |
| ATTTGCAAGGAAGACCAACA+AGG | 0.655433 | 5_2:+18695814 | Msa0761420:CDS |
| TTTGCAAGGAAGACCAACAA+GGG | 0.670312 | 5_2:+18695815 | Msa0761420:CDS |
| TTTCCATACGGTGTTCATGG+AGG | 0.673202 | 5_2:+18697657 | Msa0761420:CDS |
| AATGTCGTAGGTGTATGGCA+CGG | 0.762368 | 5_2:+18697590 | Msa0761420:intron |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ATACTTAGAAATATATTTAA+TGG | + | chr5_2:18696838-18696857 | Msa0761420:intron | 10.0% |
| !!! | TAGTTTTAATCAATTAAATA+TGG | - | chr5_2:18696994-18697013 | None:intergenic | 10.0% |
| !! | ATACTTAGAAATATATTTAA+TGG | + | chr5_2:18696838-18696857 | Msa0761420:intron | 10.0% |
| !!! | TAGTTTTAATCAATTAAATA+TGG | - | chr5_2:18696994-18697013 | None:intergenic | 10.0% |
| !! | TTCATGAATAAACAAAAAAA+TGG | - | chr5_2:18695919-18695938 | None:intergenic | 15.0% |
| !! | TTATTCATGAATTTATTGAA+TGG | + | chr5_2:18695928-18695947 | Msa0761420:intron | 15.0% |
| !! | AATTGATATATTTAATGCAT+GGG | - | chr5_2:18696165-18696184 | None:intergenic | 15.0% |
| !! | TTCATGAATAAACAAAAAAA+TGG | - | chr5_2:18695919-18695938 | None:intergenic | 15.0% |
| !! | TTATTCATGAATTTATTGAA+TGG | + | chr5_2:18695928-18695947 | Msa0761420:intron | 15.0% |
| !! | AATTGATATATTTAATGCAT+GGG | - | chr5_2:18696165-18696184 | None:intergenic | 15.0% |
| !! | ATTGATATATTTAATGCATG+GGG | - | chr5_2:18696164-18696183 | None:intergenic | 20.0% |
| !! | CAATTGATATATTTAATGCA+TGG | - | chr5_2:18696166-18696185 | None:intergenic | 20.0% |
| !! | AAAAGGAAACAAAATGTTAT+TGG | - | chr5_2:18696514-18696533 | None:intergenic | 20.0% |
| !! | ATCAAGTAAAATAATGTCAA+TGG | - | chr5_2:18696543-18696562 | None:intergenic | 20.0% |
| !!! | TTTTAATTTCTTCAACTACA+GGG | + | chr5_2:18697183-18697202 | Msa0761420:intron | 20.0% |
| !! | ATTGATATATTTAATGCATG+GGG | - | chr5_2:18696164-18696183 | None:intergenic | 20.0% |
| !! | CAATTGATATATTTAATGCA+TGG | - | chr5_2:18696166-18696185 | None:intergenic | 20.0% |
| !! | AAAAGGAAACAAAATGTTAT+TGG | - | chr5_2:18696514-18696533 | None:intergenic | 20.0% |
| !! | ATCAAGTAAAATAATGTCAA+TGG | - | chr5_2:18696543-18696562 | None:intergenic | 20.0% |
| !!! | TTTTAATTTCTTCAACTACA+GGG | + | chr5_2:18697183-18697202 | Msa0761420:intron | 20.0% |
| !! | TAAATTATATGCCCATTTTG+GGG | - | chr5_2:18696043-18696062 | None:intergenic | 25.0% |
| !! | GTAAATTATATGCCCATTTT+GGG | - | chr5_2:18696044-18696063 | None:intergenic | 25.0% |
| !! | TGTAAATTATATGCCCATTT+TGG | - | chr5_2:18696045-18696064 | None:intergenic | 25.0% |
| !!! | TTCCTTAATTTCTAGTGTTT+AGG | - | chr5_2:18696207-18696226 | None:intergenic | 25.0% |
| ! | TCTCAAATTATTATCCGTAT+TGG | - | chr5_2:18696301-18696320 | None:intergenic | 25.0% |
| ! | ACATAATTCAGTGTAATCAT+AGG | + | chr5_2:18696326-18696345 | Msa0761420:intron | 25.0% |
| ! | CATATTTCATATCTGATAGT+AGG | + | chr5_2:18696472-18696491 | Msa0761420:intron | 25.0% |
| ! | AATGTCAATGGTTAATGAAA+AGG | - | chr5_2:18696531-18696550 | None:intergenic | 25.0% |
| !!! | TACTTGATAACTGATAGTTT+TGG | + | chr5_2:18696555-18696574 | Msa0761420:intron | 25.0% |
| ! | TTCCTTAAACAATGTTCTTA+GGG | - | chr5_2:18696890-18696909 | None:intergenic | 25.0% |
| !!! | GTTTTAATTTCTTCAACTAC+AGG | + | chr5_2:18697182-18697201 | Msa0761420:intron | 25.0% |
| ! | TGAAGTTGAAATAATGTTTG+TGG | - | chr5_2:18697693-18697712 | None:intergenic | 25.0% |
| !! | TAAATTATATGCCCATTTTG+GGG | - | chr5_2:18696043-18696062 | None:intergenic | 25.0% |
| !! | GTAAATTATATGCCCATTTT+GGG | - | chr5_2:18696044-18696063 | None:intergenic | 25.0% |
| !! | TGTAAATTATATGCCCATTT+TGG | - | chr5_2:18696045-18696064 | None:intergenic | 25.0% |
| !!! | TTCCTTAATTTCTAGTGTTT+AGG | - | chr5_2:18696207-18696226 | None:intergenic | 25.0% |
| ! | TCTCAAATTATTATCCGTAT+TGG | - | chr5_2:18696301-18696320 | None:intergenic | 25.0% |
| ! | ACATAATTCAGTGTAATCAT+AGG | + | chr5_2:18696326-18696345 | Msa0761420:intron | 25.0% |
| ! | CATATTTCATATCTGATAGT+AGG | + | chr5_2:18696472-18696491 | Msa0761420:intron | 25.0% |
| ! | AATGTCAATGGTTAATGAAA+AGG | - | chr5_2:18696531-18696550 | None:intergenic | 25.0% |
| !!! | TACTTGATAACTGATAGTTT+TGG | + | chr5_2:18696555-18696574 | Msa0761420:intron | 25.0% |
| ! | TTCCTTAAACAATGTTCTTA+GGG | - | chr5_2:18696890-18696909 | None:intergenic | 25.0% |
| !!! | GTTTTAATTTCTTCAACTAC+AGG | + | chr5_2:18697182-18697201 | Msa0761420:intron | 25.0% |
| ! | TGAAGTTGAAATAATGTTTG+TGG | - | chr5_2:18697693-18697712 | None:intergenic | 25.0% |
| TGAGAGATATAACATTTGCA+AGG | + | chr5_2:18695801-18695820 | Msa0761420:CDS | 30.0% | |
| TACTAATCTTATCCCCAAAA+TGG | + | chr5_2:18696028-18696047 | Msa0761420:intron | 30.0% | |
| ACTAATCTTATCCCCAAAAT+GGG | + | chr5_2:18696029-18696048 | Msa0761420:intron | 30.0% | |
| GTGATGTAACTAGATATCTT+TGG | + | chr5_2:18696070-18696089 | Msa0761420:intron | 30.0% | |
| !! | AGTTTTGACAGTTGAAAGAT+GGG | - | chr5_2:18696096-18696115 | None:intergenic | 30.0% |
| !! | AAGTTTTGACAGTTGAAAGA+TGG | - | chr5_2:18696097-18696116 | None:intergenic | 30.0% |
| TGCCTAAACACTAGAAATTA+AGG | + | chr5_2:18696202-18696221 | Msa0761420:intron | 30.0% | |
| GACATAATAGTTATGAAGCA+CGG | + | chr5_2:18696234-18696253 | Msa0761420:intron | 30.0% | |
| GTTATTGGATGATATTCAAC+TGG | - | chr5_2:18696499-18696518 | None:intergenic | 30.0% | |
| !!! | ATAACTGATAGTTTTGGCAA+AGG | + | chr5_2:18696561-18696580 | Msa0761420:intron | 30.0% |
| !!! | TAACTGATAGTTTTGGCAAA+GGG | + | chr5_2:18696562-18696581 | Msa0761420:intron | 30.0% |
| AAAGTCTACAAGAAAACCAT+AGG | + | chr5_2:18696612-18696631 | Msa0761420:CDS | 30.0% | |
| ATGCTGAATGAATTAGTTGA+AGG | - | chr5_2:18696643-18696662 | None:intergenic | 30.0% | |
| GTTCCTTAAACAATGTTCTT+AGG | - | chr5_2:18696891-18696910 | None:intergenic | 30.0% | |
| ! | AGGACAAAATTTCTTTTCGT+GGG | - | chr5_2:18696913-18696932 | None:intergenic | 30.0% |
| ! | TCCTGAAAAGTTACTACTTT+TGG | + | chr5_2:18696929-18696948 | Msa0761420:intron | 30.0% |
| ! | TCCAAAAGTAGTAACTTTTC+AGG | - | chr5_2:18696933-18696952 | None:intergenic | 30.0% |
| AAACACACAACTACACAAAA+AGG | + | chr5_2:18697266-18697285 | Msa0761420:CDS | 30.0% | |
| GGATTACATAAAATAGCAGT+TGG | + | chr5_2:18697366-18697385 | Msa0761420:intron | 30.0% | |
| TTATTGTCATTGCCAAATAG+CGG | - | chr5_2:18697415-18697434 | None:intergenic | 30.0% | |
| GCATTTGTTCAATTTCCATA+CGG | + | chr5_2:18697645-18697664 | Msa0761420:CDS | 30.0% | |
| TGAGAGATATAACATTTGCA+AGG | + | chr5_2:18695801-18695820 | Msa0761420:CDS | 30.0% | |
| TACTAATCTTATCCCCAAAA+TGG | + | chr5_2:18696028-18696047 | Msa0761420:intron | 30.0% | |
| ACTAATCTTATCCCCAAAAT+GGG | + | chr5_2:18696029-18696048 | Msa0761420:intron | 30.0% | |
| GTGATGTAACTAGATATCTT+TGG | + | chr5_2:18696070-18696089 | Msa0761420:intron | 30.0% | |
| !! | AGTTTTGACAGTTGAAAGAT+GGG | - | chr5_2:18696096-18696115 | None:intergenic | 30.0% |
| !! | AAGTTTTGACAGTTGAAAGA+TGG | - | chr5_2:18696097-18696116 | None:intergenic | 30.0% |
| TGCCTAAACACTAGAAATTA+AGG | + | chr5_2:18696202-18696221 | Msa0761420:intron | 30.0% | |
| GACATAATAGTTATGAAGCA+CGG | + | chr5_2:18696234-18696253 | Msa0761420:intron | 30.0% | |
| GTTATTGGATGATATTCAAC+TGG | - | chr5_2:18696499-18696518 | None:intergenic | 30.0% | |
| !!! | ATAACTGATAGTTTTGGCAA+AGG | + | chr5_2:18696561-18696580 | Msa0761420:intron | 30.0% |
| !!! | TAACTGATAGTTTTGGCAAA+GGG | + | chr5_2:18696562-18696581 | Msa0761420:intron | 30.0% |
| AAAGTCTACAAGAAAACCAT+AGG | + | chr5_2:18696612-18696631 | Msa0761420:CDS | 30.0% | |
| ATGCTGAATGAATTAGTTGA+AGG | - | chr5_2:18696643-18696662 | None:intergenic | 30.0% | |
| GTTCCTTAAACAATGTTCTT+AGG | - | chr5_2:18696891-18696910 | None:intergenic | 30.0% | |
| ! | AGGACAAAATTTCTTTTCGT+GGG | - | chr5_2:18696913-18696932 | None:intergenic | 30.0% |
| ! | TCCTGAAAAGTTACTACTTT+TGG | + | chr5_2:18696929-18696948 | Msa0761420:intron | 30.0% |
| ! | TCCAAAAGTAGTAACTTTTC+AGG | - | chr5_2:18696933-18696952 | None:intergenic | 30.0% |
| AAACACACAACTACACAAAA+AGG | + | chr5_2:18697266-18697285 | Msa0761420:CDS | 30.0% | |
| GGATTACATAAAATAGCAGT+TGG | + | chr5_2:18697366-18697385 | Msa0761420:intron | 30.0% | |
| TTATTGTCATTGCCAAATAG+CGG | - | chr5_2:18697415-18697434 | None:intergenic | 30.0% | |
| GCATTTGTTCAATTTCCATA+CGG | + | chr5_2:18697645-18697664 | Msa0761420:CDS | 30.0% | |
| ! | AAATCCAGAATCTGAAGTCA+AGG | + | chr5_2:18695840-18695859 | Msa0761420:CDS | 35.0% |
| TGTTTAGGCAGTGCTTAATT+AGG | - | chr5_2:18696192-18696211 | None:intergenic | 35.0% | |
| ! | TGTAATCATAGGTGTTGTGT+CGG | + | chr5_2:18696337-18696356 | Msa0761420:intron | 35.0% |
| AGCTATTATGCTATGAAGCA+CGG | - | chr5_2:18696416-18696435 | None:intergenic | 35.0% | |
| ! | AAAGGGAGGCAGAAATTTTA+AGG | + | chr5_2:18696579-18696598 | Msa0761420:CDS | 35.0% |
| TTAGTTGAAGGTTGTACCTA+TGG | - | chr5_2:18696631-18696650 | None:intergenic | 35.0% | |
| AATGTTAGTGCTCTCATACA+TGG | - | chr5_2:18696694-18696713 | None:intergenic | 35.0% | |
| ! | CACTAACATTTTGAGCTCAT+AGG | + | chr5_2:18696704-18696723 | Msa0761420:intron | 35.0% |
| TGCCCTAAGAACATTGTTTA+AGG | + | chr5_2:18696885-18696904 | Msa0761420:intron | 35.0% | |
| ! | CAGGACAAAATTTCTTTTCG+TGG | - | chr5_2:18696914-18696933 | None:intergenic | 35.0% |
| !! | TCAACTTGTTAATCGCTTTC+TGG | - | chr5_2:18697037-18697056 | None:intergenic | 35.0% |
| ! | CAAGTTGAATCAAATTCTGC+AGG | + | chr5_2:18697049-18697068 | Msa0761420:intron | 35.0% |
| CATAATCCATCAGGAAAATG+TGG | + | chr5_2:18697209-18697228 | Msa0761420:CDS | 35.0% | |
| AAATGTGGAGCTCTATAAGA+AGG | + | chr5_2:18697224-18697243 | Msa0761420:CDS | 35.0% | |
| ! | GTTGTGTGTTTTCTTGTTGA+AGG | - | chr5_2:18697257-18697276 | None:intergenic | 35.0% |
| AAATAGCGGCTATAGATCAT+TGG | - | chr5_2:18697401-18697420 | None:intergenic | 35.0% | |
| AATGATCTATAGCCGCTATT+TGG | + | chr5_2:18697400-18697419 | Msa0761420:intron | 35.0% | |
| ! | AAATCCAGAATCTGAAGTCA+AGG | + | chr5_2:18695840-18695859 | Msa0761420:CDS | 35.0% |
| TGTTTAGGCAGTGCTTAATT+AGG | - | chr5_2:18696192-18696211 | None:intergenic | 35.0% | |
| ! | TGTAATCATAGGTGTTGTGT+CGG | + | chr5_2:18696337-18696356 | Msa0761420:intron | 35.0% |
| AGCTATTATGCTATGAAGCA+CGG | - | chr5_2:18696416-18696435 | None:intergenic | 35.0% | |
| ! | AAAGGGAGGCAGAAATTTTA+AGG | + | chr5_2:18696579-18696598 | Msa0761420:CDS | 35.0% |
| TTAGTTGAAGGTTGTACCTA+TGG | - | chr5_2:18696631-18696650 | None:intergenic | 35.0% | |
| AATGTTAGTGCTCTCATACA+TGG | - | chr5_2:18696694-18696713 | None:intergenic | 35.0% | |
| ! | CACTAACATTTTGAGCTCAT+AGG | + | chr5_2:18696704-18696723 | Msa0761420:intron | 35.0% |
| TGCCCTAAGAACATTGTTTA+AGG | + | chr5_2:18696885-18696904 | Msa0761420:intron | 35.0% | |
| ! | CAGGACAAAATTTCTTTTCG+TGG | - | chr5_2:18696914-18696933 | None:intergenic | 35.0% |
| !! | TCAACTTGTTAATCGCTTTC+TGG | - | chr5_2:18697037-18697056 | None:intergenic | 35.0% |
| ! | CAAGTTGAATCAAATTCTGC+AGG | + | chr5_2:18697049-18697068 | Msa0761420:intron | 35.0% |
| CATAATCCATCAGGAAAATG+TGG | + | chr5_2:18697209-18697228 | Msa0761420:CDS | 35.0% | |
| AAATGTGGAGCTCTATAAGA+AGG | + | chr5_2:18697224-18697243 | Msa0761420:CDS | 35.0% | |
| ! | GTTGTGTGTTTTCTTGTTGA+AGG | - | chr5_2:18697257-18697276 | None:intergenic | 35.0% |
| AAATAGCGGCTATAGATCAT+TGG | - | chr5_2:18697401-18697420 | None:intergenic | 35.0% | |
| AATGATCTATAGCCGCTATT+TGG | + | chr5_2:18697400-18697419 | Msa0761420:intron | 35.0% | |
| ATTTGCAAGGAAGACCAACA+AGG | + | chr5_2:18695814-18695833 | Msa0761420:CDS | 40.0% | |
| TTTGCAAGGAAGACCAACAA+GGG | + | chr5_2:18695815-18695834 | Msa0761420:CDS | 40.0% | |
| ATTCTGGATTTGTCCCTTGT+TGG | - | chr5_2:18695831-18695850 | None:intergenic | 40.0% | |
| CATACCTTGACTTCAGATTC+TGG | - | chr5_2:18695847-18695866 | None:intergenic | 40.0% | |
| ! | CAGAATCTGAAGTCAAGGTA+TGG | + | chr5_2:18695845-18695864 | Msa0761420:intron | 40.0% |
| ACTGTCAAAACTTCCAAGAG+TGG | + | chr5_2:18696104-18696123 | Msa0761420:intron | 40.0% | |
| ! | TATTATCCGTATTGGCGTGT+CGG | - | chr5_2:18696293-18696312 | None:intergenic | 40.0% |
| TTGAGCTCATAGGCAATTGA+TGG | + | chr5_2:18696714-18696733 | Msa0761420:intron | 40.0% | |
| TGAGCTCATAGGCAATTGAT+GGG | + | chr5_2:18696715-18696734 | Msa0761420:intron | 40.0% | |
| TTGATGGGAGAACAGCTTTA+TGG | + | chr5_2:18696730-18696749 | Msa0761420:CDS | 40.0% | |
| ! | TAAGTTCCAGTTGACTCTCT+AGG | - | chr5_2:18696780-18696799 | None:intergenic | 40.0% |
| ATGCTTAAACAATGCCCTCA+GGG | + | chr5_2:18696952-18696971 | Msa0761420:intron | 40.0% | |
| ACAGGGAAACATAATCCATC+AGG | + | chr5_2:18697200-18697219 | Msa0761420:intron | 40.0% | |
| ! | GTGTGTTTTCTTGTTGAAGG+AGG | - | chr5_2:18697254-18697273 | None:intergenic | 40.0% |
| !! | CACAGCTTACTTAATTTGCC+CGG | + | chr5_2:18697294-18697313 | Msa0761420:intron | 40.0% |
| ! | TGCGAGTCTCTTGTGATTTT+GGG | - | chr5_2:18697324-18697343 | None:intergenic | 40.0% |
| ATAGCAGTGCTATATCACAG+CGG | - | chr5_2:18697482-18697501 | None:intergenic | 40.0% | |
| ACACTGCATCACATTCACTT+AGG | + | chr5_2:18697508-18697527 | Msa0761420:intron | 40.0% | |
| CATCACATTCACTTAGGCTT+AGG | + | chr5_2:18697514-18697533 | Msa0761420:intron | 40.0% | |
| GCACAAAGAGCTTAACAATG+AGG | + | chr5_2:18697559-18697578 | Msa0761420:intron | 40.0% | |
| GAGGTTAATGTGAATGTCGT+AGG | + | chr5_2:18697578-18697597 | Msa0761420:intron | 40.0% | |
| ATGTGAATGTCGTAGGTGTA+TGG | + | chr5_2:18697585-18697604 | Msa0761420:intron | 40.0% | |
| CAATTTCCATACGGTGTTCA+TGG | + | chr5_2:18697654-18697673 | Msa0761420:CDS | 40.0% | |
| ATTTGCAAGGAAGACCAACA+AGG | + | chr5_2:18695814-18695833 | Msa0761420:CDS | 40.0% | |
| TTTGCAAGGAAGACCAACAA+GGG | + | chr5_2:18695815-18695834 | Msa0761420:CDS | 40.0% | |
| ATTCTGGATTTGTCCCTTGT+TGG | - | chr5_2:18695831-18695850 | None:intergenic | 40.0% | |
| CATACCTTGACTTCAGATTC+TGG | - | chr5_2:18695847-18695866 | None:intergenic | 40.0% | |
| ! | CAGAATCTGAAGTCAAGGTA+TGG | + | chr5_2:18695845-18695864 | Msa0761420:intron | 40.0% |
| ACTGTCAAAACTTCCAAGAG+TGG | + | chr5_2:18696104-18696123 | Msa0761420:intron | 40.0% | |
| ! | TATTATCCGTATTGGCGTGT+CGG | - | chr5_2:18696293-18696312 | None:intergenic | 40.0% |
| TTGAGCTCATAGGCAATTGA+TGG | + | chr5_2:18696714-18696733 | Msa0761420:intron | 40.0% | |
| TGAGCTCATAGGCAATTGAT+GGG | + | chr5_2:18696715-18696734 | Msa0761420:intron | 40.0% | |
| TTGATGGGAGAACAGCTTTA+TGG | + | chr5_2:18696730-18696749 | Msa0761420:CDS | 40.0% | |
| ! | TAAGTTCCAGTTGACTCTCT+AGG | - | chr5_2:18696780-18696799 | None:intergenic | 40.0% |
| ATGCTTAAACAATGCCCTCA+GGG | + | chr5_2:18696952-18696971 | Msa0761420:intron | 40.0% | |
| ACAGGGAAACATAATCCATC+AGG | + | chr5_2:18697200-18697219 | Msa0761420:intron | 40.0% | |
| ! | GTGTGTTTTCTTGTTGAAGG+AGG | - | chr5_2:18697254-18697273 | None:intergenic | 40.0% |
| !! | CACAGCTTACTTAATTTGCC+CGG | + | chr5_2:18697294-18697313 | Msa0761420:intron | 40.0% |
| ! | TGCGAGTCTCTTGTGATTTT+GGG | - | chr5_2:18697324-18697343 | None:intergenic | 40.0% |
| ATAGCAGTGCTATATCACAG+CGG | - | chr5_2:18697482-18697501 | None:intergenic | 40.0% | |
| ACACTGCATCACATTCACTT+AGG | + | chr5_2:18697508-18697527 | Msa0761420:intron | 40.0% | |
| CATCACATTCACTTAGGCTT+AGG | + | chr5_2:18697514-18697533 | Msa0761420:intron | 40.0% | |
| GCACAAAGAGCTTAACAATG+AGG | + | chr5_2:18697559-18697578 | Msa0761420:intron | 40.0% | |
| GAGGTTAATGTGAATGTCGT+AGG | + | chr5_2:18697578-18697597 | Msa0761420:intron | 40.0% | |
| ATGTGAATGTCGTAGGTGTA+TGG | + | chr5_2:18697585-18697604 | Msa0761420:intron | 40.0% | |
| CAATTTCCATACGGTGTTCA+TGG | + | chr5_2:18697654-18697673 | Msa0761420:CDS | 40.0% | |
| GAGTACAATCATGCCACTCT+TGG | - | chr5_2:18696120-18696139 | None:intergenic | 45.0% | |
| ATGAAGCACGGATACAGACA+TGG | + | chr5_2:18696246-18696265 | Msa0761420:intron | 45.0% | |
| !!! | CTGATAGTTTTGGCAAAGGG+AGG | + | chr5_2:18696565-18696584 | Msa0761420:intron | 45.0% |
| ! | GTTGACTCTCTAGGTCTTGT+AGG | - | chr5_2:18696771-18696790 | None:intergenic | 45.0% |
| ACAAGACCTAGAGAGTCAAC+TGG | + | chr5_2:18696771-18696790 | Msa0761420:CDS | 45.0% | |
| ! | TTTTCATGCGAACTCCTTGG+AGG | - | chr5_2:18696804-18696823 | None:intergenic | 45.0% |
| !! | CCTTTTTCATGCGAACTCCT+TGG | - | chr5_2:18696807-18696826 | None:intergenic | 45.0% |
| CCAAGGAGTTCGCATGAAAA+AGG | + | chr5_2:18696804-18696823 | Msa0761420:CDS | 45.0% | |
| GATGCTTAAACAATGCCCTC+AGG | + | chr5_2:18696951-18696970 | Msa0761420:intron | 45.0% | |
| AATGCTAACAAGTGCCCTGA+GGG | - | chr5_2:18696969-18696988 | None:intergenic | 45.0% | |
| AAATGCTAACAAGTGCCCTG+AGG | - | chr5_2:18696970-18696989 | None:intergenic | 45.0% | |
| AATCCAAGAGCTGAACCGAA+AGG | + | chr5_2:18697091-18697110 | Msa0761420:CDS | 45.0% | |
| TTACCTTTCGGTTCAGCTCT+TGG | - | chr5_2:18697097-18697116 | None:intergenic | 45.0% | |
| CACTGCTGAGAGTTACCTTT+CGG | - | chr5_2:18697109-18697128 | None:intergenic | 45.0% | |
| ! | AGAGCTCCACATTTTCCTGA+TGG | - | chr5_2:18697218-18697237 | None:intergenic | 45.0% |
| !! | TCTTGTGATTTTGGGGATGC+CGG | - | chr5_2:18697316-18697335 | None:intergenic | 45.0% |
| ! | GCGAGTCTCTTGTGATTTTG+GGG | - | chr5_2:18697323-18697342 | None:intergenic | 45.0% |
| ! | GTGCGAGTCTCTTGTGATTT+TGG | - | chr5_2:18697325-18697344 | None:intergenic | 45.0% |
| AATGTCGTAGGTGTATGGCA+CGG | + | chr5_2:18697590-18697609 | Msa0761420:intron | 45.0% | |
| TTTCCATACGGTGTTCATGG+AGG | + | chr5_2:18697657-18697676 | Msa0761420:CDS | 45.0% | |
| GTCTCACAGTATTCTTGCTC+AGG | - | chr5_2:18697726-18697745 | None:intergenic | 45.0% | |
| CAAGAATACTGTGAGACCTC+AGG | + | chr5_2:18697729-18697748 | Msa0761420:CDS | 45.0% | |
| GAGTACAATCATGCCACTCT+TGG | - | chr5_2:18696120-18696139 | None:intergenic | 45.0% | |
| ATGAAGCACGGATACAGACA+TGG | + | chr5_2:18696246-18696265 | Msa0761420:intron | 45.0% | |
| !!! | CTGATAGTTTTGGCAAAGGG+AGG | + | chr5_2:18696565-18696584 | Msa0761420:intron | 45.0% |
| ! | GTTGACTCTCTAGGTCTTGT+AGG | - | chr5_2:18696771-18696790 | None:intergenic | 45.0% |
| ACAAGACCTAGAGAGTCAAC+TGG | + | chr5_2:18696771-18696790 | Msa0761420:CDS | 45.0% | |
| ! | TTTTCATGCGAACTCCTTGG+AGG | - | chr5_2:18696804-18696823 | None:intergenic | 45.0% |
| !! | CCTTTTTCATGCGAACTCCT+TGG | - | chr5_2:18696807-18696826 | None:intergenic | 45.0% |
| CCAAGGAGTTCGCATGAAAA+AGG | + | chr5_2:18696804-18696823 | Msa0761420:CDS | 45.0% | |
| GATGCTTAAACAATGCCCTC+AGG | + | chr5_2:18696951-18696970 | Msa0761420:intron | 45.0% | |
| AATGCTAACAAGTGCCCTGA+GGG | - | chr5_2:18696969-18696988 | None:intergenic | 45.0% | |
| AAATGCTAACAAGTGCCCTG+AGG | - | chr5_2:18696970-18696989 | None:intergenic | 45.0% | |
| AATCCAAGAGCTGAACCGAA+AGG | + | chr5_2:18697091-18697110 | Msa0761420:CDS | 45.0% | |
| TTACCTTTCGGTTCAGCTCT+TGG | - | chr5_2:18697097-18697116 | None:intergenic | 45.0% | |
| CACTGCTGAGAGTTACCTTT+CGG | - | chr5_2:18697109-18697128 | None:intergenic | 45.0% | |
| ! | AGAGCTCCACATTTTCCTGA+TGG | - | chr5_2:18697218-18697237 | None:intergenic | 45.0% |
| !! | TCTTGTGATTTTGGGGATGC+CGG | - | chr5_2:18697316-18697335 | None:intergenic | 45.0% |
| ! | GCGAGTCTCTTGTGATTTTG+GGG | - | chr5_2:18697323-18697342 | None:intergenic | 45.0% |
| ! | GTGCGAGTCTCTTGTGATTT+TGG | - | chr5_2:18697325-18697344 | None:intergenic | 45.0% |
| AATGTCGTAGGTGTATGGCA+CGG | + | chr5_2:18697590-18697609 | Msa0761420:intron | 45.0% | |
| TTTCCATACGGTGTTCATGG+AGG | + | chr5_2:18697657-18697676 | Msa0761420:CDS | 45.0% | |
| GTCTCACAGTATTCTTGCTC+AGG | - | chr5_2:18697726-18697745 | None:intergenic | 45.0% | |
| CAAGAATACTGTGAGACCTC+AGG | + | chr5_2:18697729-18697748 | Msa0761420:CDS | 45.0% | |
| ! | GTCGGTGTCTATATCGTGTC+TGG | - | chr5_2:18696275-18696294 | None:intergenic | 50.0% |
| TAGACACCGACACGCCAATA+CGG | + | chr5_2:18696284-18696303 | Msa0761420:intron | 50.0% | |
| ! | CATAGGTGTTGTGTCGGTGT+TGG | + | chr5_2:18696343-18696362 | Msa0761420:intron | 50.0% |
| TATGAAGCACGGACACCCTT+CGG | - | chr5_2:18696405-18696424 | None:intergenic | 50.0% | |
| CAACTGGAACTTAGCCTCCA+AGG | + | chr5_2:18696787-18696806 | Msa0761420:CDS | 50.0% | |
| !! | CTTGTGATTTTGGGGATGCC+GGG | - | chr5_2:18697315-18697334 | None:intergenic | 50.0% |
| CACATCAGTGTTGTGAGTCG+CGG | + | chr5_2:18697345-18697364 | Msa0761420:intron | 50.0% | |
| CACAGTATTCTTGCTCAGGC+TGG | - | chr5_2:18697722-18697741 | None:intergenic | 50.0% | |
| ! | GTCGGTGTCTATATCGTGTC+TGG | - | chr5_2:18696275-18696294 | None:intergenic | 50.0% |
| TAGACACCGACACGCCAATA+CGG | + | chr5_2:18696284-18696303 | Msa0761420:intron | 50.0% | |
| ! | CATAGGTGTTGTGTCGGTGT+TGG | + | chr5_2:18696343-18696362 | Msa0761420:intron | 50.0% |
| TATGAAGCACGGACACCCTT+CGG | - | chr5_2:18696405-18696424 | None:intergenic | 50.0% | |
| CAACTGGAACTTAGCCTCCA+AGG | + | chr5_2:18696787-18696806 | Msa0761420:CDS | 50.0% | |
| !! | CTTGTGATTTTGGGGATGCC+GGG | - | chr5_2:18697315-18697334 | None:intergenic | 50.0% |
| CACATCAGTGTTGTGAGTCG+CGG | + | chr5_2:18697345-18697364 | Msa0761420:intron | 50.0% | |
| CACAGTATTCTTGCTCAGGC+TGG | - | chr5_2:18697722-18697741 | None:intergenic | 50.0% | |
| ! | GATTAGGCGTGTCTCGGTGT+CGG | - | chr5_2:18696383-18696402 | None:intergenic | 55.0% |
| ! | CCTTCGGATTAGGCGTGTCT+CGG | - | chr5_2:18696389-18696408 | None:intergenic | 55.0% |
| CGAGACACGCCTAATCCGAA+GGG | + | chr5_2:18696387-18696406 | Msa0761420:intron | 55.0% | |
| CGCGACTCACAACACTGATG+TGG | - | chr5_2:18697347-18697366 | None:intergenic | 55.0% | |
| CCTCCTCCATGAACACCGTA+TGG | - | chr5_2:18697663-18697682 | None:intergenic | 55.0% | |
| CCATACGGTGTTCATGGAGG+AGG | + | chr5_2:18697660-18697679 | Msa0761420:CDS | 55.0% | |
| TGTTGCACTTGCACTGCCTG+AGG | - | chr5_2:18697748-18697767 | None:intergenic | 55.0% | |
| ! | GATTAGGCGTGTCTCGGTGT+CGG | - | chr5_2:18696383-18696402 | None:intergenic | 55.0% |
| ! | CCTTCGGATTAGGCGTGTCT+CGG | - | chr5_2:18696389-18696408 | None:intergenic | 55.0% |
| CGAGACACGCCTAATCCGAA+GGG | + | chr5_2:18696387-18696406 | Msa0761420:intron | 55.0% | |
| CGCGACTCACAACACTGATG+TGG | - | chr5_2:18697347-18697366 | None:intergenic | 55.0% | |
| CCTCCTCCATGAACACCGTA+TGG | - | chr5_2:18697663-18697682 | None:intergenic | 55.0% | |
| CCATACGGTGTTCATGGAGG+AGG | + | chr5_2:18697660-18697679 | Msa0761420:CDS | 55.0% | |
| TGTTGCACTTGCACTGCCTG+AGG | - | chr5_2:18697748-18697767 | None:intergenic | 55.0% | |
| !! | TCTCGGTGTCGGATACGCGT+CGG | - | chr5_2:18696372-18696391 | None:intergenic | 60.0% |
| CCGAGACACGCCTAATCCGA+AGG | + | chr5_2:18696386-18696405 | Msa0761420:intron | 60.0% | |
| GCACGGACACCCTTCGGATT+AGG | - | chr5_2:18696399-18696418 | None:intergenic | 60.0% | |
| !! | TCTCGGTGTCGGATACGCGT+CGG | - | chr5_2:18696372-18696391 | None:intergenic | 60.0% |
| CCGAGACACGCCTAATCCGA+AGG | + | chr5_2:18696386-18696405 | Msa0761420:intron | 60.0% | |
| GCACGGACACCCTTCGGATT+AGG | - | chr5_2:18696399-18696418 | None:intergenic | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr5_2 | gene | 18695787 | 18697773 | 18695787 | ID=Msa0761420;Name=Msa0761420 |
| chr5_2 | mRNA | 18695787 | 18697773 | 18695787 | ID=Msa0761420-mRNA-1;Parent=Msa0761420;Name=Msa0761420-mRNA-1;_AED=0.04;_eAED=0.04;_QI=0|0|0|1|1|1|6|0|178 |
| chr5_2 | exon | 18695787 | 18695861 | 18695787 | ID=Msa0761420-mRNA-1:exon:8074;Parent=Msa0761420-mRNA-1 |
| chr5_2 | exon | 18696572 | 18696633 | 18696572 | ID=Msa0761420-mRNA-1:exon:8075;Parent=Msa0761420-mRNA-1 |
| chr5_2 | exon | 18696726 | 18696825 | 18696726 | ID=Msa0761420-mRNA-1:exon:8076;Parent=Msa0761420-mRNA-1 |
| chr5_2 | exon | 18697071 | 18697112 | 18697071 | ID=Msa0761420-mRNA-1:exon:8077;Parent=Msa0761420-mRNA-1 |
| chr5_2 | exon | 18697204 | 18697287 | 18697204 | ID=Msa0761420-mRNA-1:exon:8078;Parent=Msa0761420-mRNA-1 |
| chr5_2 | exon | 18697600 | 18697773 | 18697600 | ID=Msa0761420-mRNA-1:exon:8079;Parent=Msa0761420-mRNA-1 |
| chr5_2 | CDS | 18695787 | 18695861 | 18695787 | ID=Msa0761420-mRNA-1:cds;Parent=Msa0761420-mRNA-1 |
| chr5_2 | CDS | 18696572 | 18696633 | 18696572 | ID=Msa0761420-mRNA-1:cds;Parent=Msa0761420-mRNA-1 |
| chr5_2 | CDS | 18696726 | 18696825 | 18696726 | ID=Msa0761420-mRNA-1:cds;Parent=Msa0761420-mRNA-1 |
| chr5_2 | CDS | 18697071 | 18697112 | 18697071 | ID=Msa0761420-mRNA-1:cds;Parent=Msa0761420-mRNA-1 |
| chr5_2 | CDS | 18697204 | 18697287 | 18697204 | ID=Msa0761420-mRNA-1:cds;Parent=Msa0761420-mRNA-1 |
| chr5_2 | CDS | 18697600 | 18697773 | 18697600 | ID=Msa0761420-mRNA-1:cds;Parent=Msa0761420-mRNA-1 |
| Gene Sequence |
| Protein sequence |
