Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0928340 | XP_024641309.2 | 87.805 | 246 | 19 | 3 | 1 | 240 | 1 | 241 | 6.91e-145 | 414 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0928340 | sp|Q93WL3|CLPT1_ARATH | 49.782 | 229 | 104 | 7 | 18 | 240 | 14 | 237 | 1.67e-64 | 203 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0030400 | Msa0928340 | 0.801363 | 9.326003e-49 | -8.615850e-47 |
| Msa0116200 | Msa0928340 | 0.812371 | 4.384508e-51 | -8.615850e-47 |
| Msa0653090 | Msa0928340 | 0.811903 | 5.547582e-51 | -8.615850e-47 |
| Msa0669160 | Msa0928340 | 0.803522 | 3.348665e-49 | -8.615850e-47 |
| Msa0757090 | Msa0928340 | 0.803686 | 3.097320e-49 | -8.615850e-47 |
| Msa0795850 | Msa0928340 | 0.815257 | 1.014452e-51 | -8.615850e-47 |
| Msa0795930 | Msa0928340 | 0.817856 | 2.654101e-52 | -8.615850e-47 |
| Msa0838100 | Msa0928340 | 0.810793 | 9.659702e-51 | -8.615850e-47 |
| Msa0128110 | Msa0928340 | 0.805481 | 1.307672e-49 | -8.615850e-47 |
| Msa0164630 | Msa0928340 | 0.800435 | 1.443310e-48 | -8.615850e-47 |
| Msa0173850 | Msa0928340 | 0.817418 | 3.332333e-52 | -8.615850e-47 |
| Msa0544710 | Msa0928340 | 0.816420 | 5.580677e-52 | -8.615850e-47 |
| Msa0554170 | Msa0928340 | 0.842267 | 2.870462e-58 | -8.615850e-47 |
| Msa0556750 | Msa0928340 | 0.832934 | 7.118598e-56 | -8.615850e-47 |
| Msa0559280 | Msa0928340 | 0.803098 | 4.098594e-49 | -8.615850e-47 |
| Msa0573970 | Msa0928340 | 0.800612 | 1.328452e-48 | -8.615850e-47 |
| Msa0580360 | Msa0928340 | 0.825278 | 5.114344e-54 | -8.615850e-47 |
| Msa0580430 | Msa0928340 | 0.810563 | 1.083416e-50 | -8.615850e-47 |
| Msa0928340 | Msa0928360 | 0.807399 | 5.152282e-50 | -8.615850e-47 |
| Msa0928340 | Msa1185030 | 0.803648 | 3.152920e-49 | -8.615850e-47 |
| Msa0928340 | Msa1425510 | 0.802244 | 6.151102e-49 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0928340 | MtrunA17_Chr6g0475931 | 87.805 | 246 | 19 | 3 | 1 | 240 | 1 | 241 | 6.36e-149 | 414 |
| Msa0928340 | MtrunA17_Chr5g0398561 | 49.398 | 166 | 80 | 2 | 59 | 223 | 59 | 221 | 7.45e-49 | 160 |
| Msa0928340 | MtrunA17_Chr3g0135231 | 30.159 | 126 | 86 | 1 | 89 | 214 | 86 | 209 | 5.00e-11 | 62.0 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0928340 | AT4G25370.1 | 49.782 | 229 | 104 | 7 | 18 | 240 | 14 | 237 | 1.70e-65 | 203 |
| Msa0928340 | AT4G12060.1 | 47.907 | 215 | 102 | 6 | 25 | 233 | 30 | 240 | 2.59e-51 | 167 |
Find 71 sgRNAs with CRISPR-Local
Find 359 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AACGTGACTCATTTACTTCT+TGG | 0.193512 | 6_2:+73620386 | Msa0928340:CDS |
| CTCATTTACTTCTTGGAATT+TGG | 0.207345 | 6_2:+73620393 | Msa0928340:CDS |
| AAAACTCACTTTGAAGGATT+TGG | 0.216298 | 6_2:-73615914 | None:intergenic |
| TGCTGTTTCAGCAATTTCTT+TGG | 0.256036 | 6_2:-73620477 | None:intergenic |
| AGAGCTTCGGTTCCTACTTT+AGG | 0.268153 | 6_2:-73617824 | None:intergenic |
| CTCTCTCTAACTTCTCTCTT+TGG | 0.296798 | 6_2:+73615684 | Msa0928340:CDS |
| CGAAAGGTCTTGTCTGCTTT+AGG | 0.302687 | 6_2:+73620437 | Msa0928340:CDS |
| GCAAAATTCTTAAGAGCTAA+TGG | 0.310722 | 6_2:+73619115 | Msa0928340:CDS |
| GAGTGTGTTGGTGTTGGTGT+TGG | 0.384065 | 6_2:-73615622 | None:intergenic |
| GGCATATGCAATGGCGGAGT+TGG | 0.395307 | 6_2:+73617781 | Msa0928340:CDS |
| AGTGTGTTGGTGTTGGTGTT+GGG | 0.402794 | 6_2:-73615621 | None:intergenic |
| AAGAAGAGAGTGTGAAGAAA+AGG | 0.405397 | 6_2:-73615592 | None:intergenic |
| TTAGAGAGAGAGTACATGAT+TGG | 0.409045 | 6_2:-73615671 | None:intergenic |
| GGGTCAGTGGGGAGATTAAA+CGG | 0.441953 | 6_2:-73615771 | None:intergenic |
| AGTACATGATTGGTTGTTGT+TGG | 0.445207 | 6_2:-73615661 | None:intergenic |
| CGGAAGTTTGTGATGGAAAT+GGG | 0.449096 | 6_2:-73615729 | None:intergenic |
| GTGGTCGGCAAGGGCTATAA+AGG | 0.454223 | 6_2:+73617760 | Msa0928340:CDS |
| ACGGAAGTTTGTGATGGAAA+TGG | 0.456130 | 6_2:-73615730 | None:intergenic |
| AGGCTAGTGGTGATATTGAT+TGG | 0.457256 | 6_2:+73620810 | Msa0928340:intron |
| AGAGAGTGTGAAGAAAAGGT+TGG | 0.483166 | 6_2:-73615588 | None:intergenic |
| TGGTTTAAGGTGGTCGGCAA+GGG | 0.483961 | 6_2:+73617751 | Msa0928340:intron |
| GTGTGAAGAAAAGGTTGGAA+TGG | 0.488637 | 6_2:-73615583 | None:intergenic |
| TGTTGCAGGAATCCACAATC+TGG | 0.493433 | 6_2:+73615875 | Msa0928340:intron |
| GGCAAGAACTTACGGGTCAG+TGG | 0.493455 | 6_2:-73615784 | None:intergenic |
| GAACAAACATTAGAGATACT+TGG | 0.494086 | 6_2:+73619160 | Msa0928340:CDS |
| TTTGTTTGGTTTAAGGTGGT+CGG | 0.498643 | 6_2:+73617745 | Msa0928340:intron |
| CACTTCATAAAGCCCTCGAT+TGG | 0.501232 | 6_2:+73619233 | Msa0928340:CDS |
| TTGGTTTAAGGTGGTCGGCA+AGG | 0.507786 | 6_2:+73617750 | Msa0928340:intron |
| AATCCCCATGAGAAGAGCTT+CGG | 0.510732 | 6_2:-73617837 | None:intergenic |
| GGAACCGAAGCTCTTCTCAT+GGG | 0.514916 | 6_2:+73617833 | Msa0928340:CDS |
| TTCTTGGATTCGCCAGATTG+TGG | 0.515246 | 6_2:-73615887 | None:intergenic |
| AAACTTAAGTATCCTAAAGT+AGG | 0.518801 | 6_2:+73617812 | Msa0928340:CDS |
| CAAAGAAAGTACCACAGGGC+TGG | 0.521979 | 6_2:-73619203 | None:intergenic |
| AATTTGGTCACAAGAAGAAT+CGG | 0.524470 | 6_2:+73620409 | Msa0928340:CDS |
| CTTAATGAGACATCAAAGTC+AGG | 0.528570 | 6_2:+73619259 | Msa0928340:CDS |
| CTTCCGTGCCACTTCAGAAA+CGG | 0.530041 | 6_2:+73615746 | Msa0928340:CDS |
| GCAAGAACTTACGGGTCAGT+GGG | 0.531070 | 6_2:-73615783 | None:intergenic |
| AACTTGTATCGCTTTATCCC+CGG | 0.534663 | 6_2:-73620861 | None:intergenic |
| AAACGGCACCGTTTCTGAAG+TGG | 0.536415 | 6_2:-73615754 | None:intergenic |
| ACTTCATAAAGCCCTCGATT+GGG | 0.536661 | 6_2:+73619234 | Msa0928340:CDS |
| AACAAACATTAGAGATACTT+GGG | 0.539478 | 6_2:+73619161 | Msa0928340:CDS |
| TGATATAAAATGTAGGTGAA+GGG | 0.544707 | 6_2:+73620357 | Msa0928340:intron |
| TTATGTTTCTTGTAGGCTAG+TGG | 0.544994 | 6_2:+73620797 | Msa0928340:intron |
| CTCATTAAGTGCCCAATCGA+GGG | 0.546784 | 6_2:-73619245 | None:intergenic |
| TCAGTCAAAGAAAGTACCAC+AGG | 0.556367 | 6_2:-73619208 | None:intergenic |
| GATATAAAATGTAGGTGAAG+GGG | 0.556811 | 6_2:+73620358 | Msa0928340:intron |
| AGAAGAATCGGCAGGTCGAA+AGG | 0.557152 | 6_2:+73620421 | Msa0928340:CDS |
| CAATGGCGGAGTTGGAAACA+AGG | 0.558511 | 6_2:+73617789 | Msa0928340:CDS |
| CAATCGAGGGCTTTATGAAG+TGG | 0.559203 | 6_2:-73619232 | None:intergenic |
| CATTGAAGAAAGAGAGAGAG+AGG | 0.568415 | 6_2:-73615556 | None:intergenic |
| AGGGAAGAGTGTGTTGGTGT+TGG | 0.571855 | 6_2:-73615628 | None:intergenic |
| TTTGACATGGAAATATAAAG+AGG | 0.572239 | 6_2:-73620911 | None:intergenic |
| AGGAACCGAAGCTCTTCTCA+TGG | 0.574875 | 6_2:+73617832 | Msa0928340:CDS |
| TTGACATGGAAATATAAAGA+GGG | 0.576609 | 6_2:-73620910 | None:intergenic |
| GGCTATAAAGGCATATGCAA+TGG | 0.582460 | 6_2:+73617772 | Msa0928340:CDS |
| TTGTGATGGAAATGGGTCGT+TGG | 0.585176 | 6_2:-73615722 | None:intergenic |
| TGGTCACAAGAAGAATCGGC+AGG | 0.599189 | 6_2:+73620413 | Msa0928340:CDS |
| AGATACTTGGGAAATCTGAC+TGG | 0.600934 | 6_2:+73619173 | Msa0928340:CDS |
| TCTCATTAAGTGCCCAATCG+AGG | 0.607236 | 6_2:-73619246 | None:intergenic |
| ATTGAAGAAAGAGAGAGAGA+GGG | 0.619448 | 6_2:-73615555 | None:intergenic |
| GAACCGAAGCTCTTCTCATG+GGG | 0.645463 | 6_2:+73617834 | Msa0928340:CDS |
| TGAACGAGGGAAGAGTGTGT+TGG | 0.654665 | 6_2:-73615634 | None:intergenic |
| GCACCGTTTCTGAAGTGGCA+CGG | 0.660995 | 6_2:-73615749 | None:intergenic |
| AGTGGCACGGAAGTTTGTGA+TGG | 0.665152 | 6_2:-73615736 | None:intergenic |
| TATAAAGGCATATGCAATGG+CGG | 0.665721 | 6_2:+73617775 | Msa0928340:CDS |
| TAGTACAACAGTATTTGACA+TGG | 0.674608 | 6_2:-73620924 | None:intergenic |
| CAGTCAAAGAAAGTACCACA+GGG | 0.683176 | 6_2:-73619207 | None:intergenic |
| CTGGTACTACTCCAGCCCTG+TGG | 0.699262 | 6_2:+73619192 | Msa0928340:CDS |
| TGTTGTTGGAAAATGAACGA+GGG | 0.700580 | 6_2:-73615647 | None:intergenic |
| CAAGAACTTACGGGTCAGTG+GGG | 0.712403 | 6_2:-73615782 | None:intergenic |
| TTGTTGTTGGAAAATGAACG+AGG | 0.716973 | 6_2:-73615648 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TATTCTAATTTATATGTATT+CGG | - | chr6_2:73616299-73616318 | None:intergenic | 10.0% |
| !! | TATTAATAAGAGATATATTT+GGG | + | chr6_2:73616553-73616572 | Msa0928340:intron | 10.0% |
| !!! | AGAAACAATTTTTTTTTAAA+TGG | - | chr6_2:73616697-73616716 | None:intergenic | 10.0% |
| !! | TCACAAAAAAAAAAAAAAAT+AGG | + | chr6_2:73617422-73617441 | Msa0928340:intron | 10.0% |
| !! | TATAAACACATAAATTTAAT+AGG | + | chr6_2:73618192-73618211 | Msa0928340:intron | 10.0% |
| !!! | CAAAACATTAAAATATATTT+TGG | - | chr6_2:73618561-73618580 | None:intergenic | 10.0% |
| !! | ACATTATTAAATCTTAAAAT+TGG | + | chr6_2:73618820-73618839 | Msa0928340:intron | 10.0% |
| !!! | TATTTTGACAAAAAAAAAAT+GGG | - | chr6_2:73619707-73619726 | None:intergenic | 10.0% |
| !!! | TTATTTTGACAAAAAAAAAA+TGG | - | chr6_2:73619708-73619727 | None:intergenic | 10.0% |
| !! | TATTGTAATGTTTAAAAAAT+CGG | - | chr6_2:73620731-73620750 | None:intergenic | 10.0% |
| !!! | ATTATATGATTTTCTATTAG+AGG | - | chr6_2:73616113-73616132 | None:intergenic | 15.0% |
| !! | ATTAGAATAATTCATCTAAT+TGG | + | chr6_2:73616310-73616329 | Msa0928340:intron | 15.0% |
| !!! | AAAATTTATTTGAAATGTGT+CGG | + | chr6_2:73616457-73616476 | Msa0928340:intron | 15.0% |
| !! | CTAAATGTATTTATTCATAA+AGG | - | chr6_2:73616499-73616518 | None:intergenic | 15.0% |
| !! | GTATTAATAAGAGATATATT+TGG | + | chr6_2:73616552-73616571 | Msa0928340:intron | 15.0% |
| !! | ATTAATAAGAGATATATTTG+GGG | + | chr6_2:73616554-73616573 | Msa0928340:intron | 15.0% |
| !!! | GAAAATTAAATTTTTGTGAA+GGG | + | chr6_2:73616627-73616646 | Msa0928340:intron | 15.0% |
| !!! | CTATTTTTTAAACATAAATG+AGG | - | chr6_2:73617216-73617235 | None:intergenic | 15.0% |
| !! | ATAAATTAATACAATTAAGG+CGG | - | chr6_2:73617585-73617604 | None:intergenic | 15.0% |
| !!! | TATTTGTTTTCATTGAAAAA+TGG | + | chr6_2:73618268-73618287 | Msa0928340:intron | 15.0% |
| !! | GTTATTATGATATAAAATGT+AGG | + | chr6_2:73620350-73620369 | Msa0928340:intron | 15.0% |
| !!! | CAATAATACAATGTTTTATT+TGG | + | chr6_2:73620520-73620539 | Msa0928340:intron | 15.0% |
| !!! | TCTTTTTTATACAAGTTTTT+TGG | + | chr6_2:73620975-73620994 | Msa0928340:three_prime_UTR | 15.0% |
| !! | AAAAAAAATAAGTGTTACAA+GGG | - | chr6_2:73621058-73621077 | None:intergenic | 15.0% |
| !! | TAAAAAAAATAAGTGTTACA+AGG | - | chr6_2:73621059-73621078 | None:intergenic | 15.0% |
| !! | AGTTCAATATTTCATGTAAT+TGG | + | chr6_2:73615971-73615990 | Msa0928340:intron | 20.0% |
| !! | GTTCAATATTTCATGTAATT+GGG | + | chr6_2:73615972-73615991 | Msa0928340:intron | 20.0% |
| !! | TATTATAGTATAGATCTATG+AGG | - | chr6_2:73616214-73616233 | None:intergenic | 20.0% |
| !! | TAGATCTATACTATAATACA+TGG | + | chr6_2:73616216-73616235 | Msa0928340:intron | 20.0% |
| !!! | ATTTTGTGTTTTTATGTTTG+TGG | + | chr6_2:73616347-73616366 | Msa0928340:intron | 20.0% |
| !! | GTTAGAAGTTCTTATAATAA+AGG | - | chr6_2:73616400-73616419 | None:intergenic | 20.0% |
| !! | TTAATAAGAGATATATTTGG+GGG | + | chr6_2:73616555-73616574 | Msa0928340:intron | 20.0% |
| !! | TGTATATAGAAATTTGTAGA+GGG | + | chr6_2:73616592-73616611 | Msa0928340:intron | 20.0% |
| !!! | GGAAAATTAAATTTTTGTGA+AGG | + | chr6_2:73616626-73616645 | Msa0928340:intron | 20.0% |
| !!! | ATTTTTTTTTAAATGGTCTG+TGG | - | chr6_2:73616690-73616709 | None:intergenic | 20.0% |
| !!! | TGTTGATTTTTAATATTCTC+AGG | - | chr6_2:73616792-73616811 | None:intergenic | 20.0% |
| !! | AACAAAAATATGGTATCTAT+TGG | - | chr6_2:73616846-73616865 | None:intergenic | 20.0% |
| !! | ATATATATAGATAGAGTTTG+TGG | + | chr6_2:73617317-73617336 | Msa0928340:intron | 20.0% |
| !! | TCATTACATTTCTATAGTTT+AGG | + | chr6_2:73617376-73617395 | Msa0928340:intron | 20.0% |
| !! | CATTACATTTCTATAGTTTA+GGG | + | chr6_2:73617377-73617396 | Msa0928340:intron | 20.0% |
| !! | AGGATAGATAATTAAAGTTT+AGG | + | chr6_2:73617442-73617461 | Msa0928340:intron | 20.0% |
| !!! | CAATTTGTTTTGTTTTTGTT+TGG | + | chr6_2:73617731-73617750 | Msa0928340:intron | 20.0% |
| !!! | TTTTGTTTTTGTTTGGTTTA+AGG | + | chr6_2:73617738-73617757 | Msa0928340:intron | 20.0% |
| !! | ATTTAATAGGTATATGCATT+TGG | + | chr6_2:73618205-73618224 | Msa0928340:intron | 20.0% |
| !! | TTTAATAGGTATATGCATTT+GGG | + | chr6_2:73618206-73618225 | Msa0928340:intron | 20.0% |
| !! | TAATCTACTCAAATAACTAA+TGG | - | chr6_2:73618329-73618348 | None:intergenic | 20.0% |
| !! | TTAGTTATTTGAGTAGATTA+TGG | + | chr6_2:73618329-73618348 | Msa0928340:intron | 20.0% |
| !! | TAGTTATTTGAGTAGATTAT+GGG | + | chr6_2:73618330-73618349 | Msa0928340:intron | 20.0% |
| !! | AGAATCAAATATTCAAACTT+GGG | - | chr6_2:73618933-73618952 | None:intergenic | 20.0% |
| !! | TAGAATCAAATATTCAAACT+TGG | - | chr6_2:73618934-73618953 | None:intergenic | 20.0% |
| !! | AAGTTTGAATATTTGATTCT+AGG | + | chr6_2:73618933-73618952 | Msa0928340:intron | 20.0% |
| !! | TAATTAAAACATGAACACAA+TGG | - | chr6_2:73619405-73619424 | None:intergenic | 20.0% |
| !!! | CAAACATGATTTTTTTTTTC+AGG | - | chr6_2:73619525-73619544 | None:intergenic | 20.0% |
| !! | ACATAACGAATCATATATTT+AGG | + | chr6_2:73619656-73619675 | Msa0928340:intron | 20.0% |
| !! | AAATGTACTAAATAGACAAT+AGG | + | chr6_2:73620111-73620130 | Msa0928340:intron | 20.0% |
| !! | TAATGAACAAACAAACAATA+GGG | - | chr6_2:73620203-73620222 | None:intergenic | 20.0% |
| !! | TTAATGAACAAACAAACAAT+AGG | - | chr6_2:73620204-73620223 | None:intergenic | 20.0% |
| !!! | AATGTTTTATTTGGTTTCAT+TGG | + | chr6_2:73620529-73620548 | Msa0928340:intron | 20.0% |
| !! | TGCATTATTTATTTATGATC+TGG | - | chr6_2:73620571-73620590 | None:intergenic | 20.0% |
| !!! | TGTTTTTTTTTTGTTGTTGC+AGG | + | chr6_2:73615861-73615880 | Msa0928340:intron | 25.0% |
| ! | AACAAAAAAACTCACTTTGA+AGG | - | chr6_2:73615923-73615942 | None:intergenic | 25.0% |
| !!! | ATTCATCTAATTGGTTTTTG+TGG | + | chr6_2:73616319-73616338 | Msa0928340:intron | 25.0% |
| ! | AGAACTTCTAACAAAAATCA+CGG | + | chr6_2:73616408-73616427 | Msa0928340:intron | 25.0% |
| ! | GTGTATATAGAAATTTGTAG+AGG | + | chr6_2:73616591-73616610 | Msa0928340:intron | 25.0% |
| !! | AGTACTGAAATTTGAAATGA+CGG | + | chr6_2:73617026-73617045 | Msa0928340:intron | 25.0% |
| ! | TAAATGAGGACTAATAGTTT+AGG | - | chr6_2:73617202-73617221 | None:intergenic | 25.0% |
| !! | AAGTTTAGGAGAAAAGTTTT+AGG | + | chr6_2:73617456-73617475 | Msa0928340:intron | 25.0% |
| ! | ACTCTTCAATAATTCATGTA+AGG | + | chr6_2:73617482-73617501 | Msa0928340:intron | 25.0% |
| !! | ATAATACTAGTTTGTACGAA+AGG | + | chr6_2:73617505-73617524 | Msa0928340:intron | 25.0% |
| !!! | AAGAGTATTGCTATTTAGTA+CGG | - | chr6_2:73617671-73617690 | None:intergenic | 25.0% |
| ! | AAACTTAAGTATCCTAAAGT+AGG | + | chr6_2:73617812-73617831 | Msa0928340:CDS | 25.0% |
| !! | TGTGTAAAGAGATTTTATAC+TGG | + | chr6_2:73618098-73618117 | Msa0928340:intron | 25.0% |
| ! | TTAAACCATTATGCAATAAG+TGG | + | chr6_2:73618140-73618159 | Msa0928340:intron | 25.0% |
| !!! | AAAAGTGCTAATGTAAGTAT+TGG | - | chr6_2:73618393-73618412 | None:intergenic | 25.0% |
| ! | ATCAAAATAACACAACCAAA+AGG | - | chr6_2:73618479-73618498 | None:intergenic | 25.0% |
| ! | TGTATATATAGAACCAAGAA+TGG | + | chr6_2:73618585-73618604 | Msa0928340:intron | 25.0% |
| !! | GTTTCTAGAAAAAAATCACA+GGG | - | chr6_2:73618626-73618645 | None:intergenic | 25.0% |
| !! | AGTTTCTAGAAAAAAATCAC+AGG | - | chr6_2:73618627-73618646 | None:intergenic | 25.0% |
| ! | ATTATAATAGATAGTGAGCT+AGG | + | chr6_2:73618903-73618922 | Msa0928340:intron | 25.0% |
| !!! | GGCATGATTTTTAAAAACTT+TGG | - | chr6_2:73618981-73619000 | None:intergenic | 25.0% |
| ! | AACAAACATTAGAGATACTT+GGG | + | chr6_2:73619161-73619180 | Msa0928340:CDS | 25.0% |
| ! | AAAAAAATGGGACAACAATT+TGG | - | chr6_2:73619695-73619714 | None:intergenic | 25.0% |
| !! | AAAGTTTAAAGTACTAAAGC+TGG | - | chr6_2:73619945-73619964 | None:intergenic | 25.0% |
| !! | GAAAACCAATGTAATTTTGA+GGG | - | chr6_2:73620232-73620251 | None:intergenic | 25.0% |
| ! | TTAGAGAAGAATTGAACAAT+AGG | - | chr6_2:73620275-73620294 | None:intergenic | 25.0% |
| ! | ATGATATAAAATGTAGGTGA+AGG | + | chr6_2:73620356-73620375 | Msa0928340:intron | 25.0% |
| ! | TGATATAAAATGTAGGTGAA+GGG | + | chr6_2:73620357-73620376 | Msa0928340:intron | 25.0% |
| ! | ACCTCAATGACTATAAAATA+TGG | + | chr6_2:73620773-73620792 | Msa0928340:intron | 25.0% |
| !! | ACCATATTTTATAGTCATTG+AGG | - | chr6_2:73620777-73620796 | None:intergenic | 25.0% |
| ! | ATATGGTTTATGTTTCTTGT+AGG | + | chr6_2:73620790-73620809 | Msa0928340:intron | 25.0% |
| ! | TTGACATGGAAATATAAAGA+GGG | - | chr6_2:73620913-73620932 | None:intergenic | 25.0% |
| ! | TTTGACATGGAAATATAAAG+AGG | - | chr6_2:73620914-73620933 | None:intergenic | 25.0% |
| ! | AAAACTCACTTTGAAGGATT+TGG | - | chr6_2:73615917-73615936 | None:intergenic | 30.0% |
| ATATTTCATGTAATTGGGTC+CGG | + | chr6_2:73615977-73615996 | Msa0928340:intron | 30.0% | |
| !!! | GATTTTCTATTAGAGGTGTT+TGG | - | chr6_2:73616106-73616125 | None:intergenic | 30.0% |
| ! | TATAATACATGGCTTTTCTC+CGG | + | chr6_2:73616227-73616246 | Msa0928340:intron | 30.0% |
| GAACTTCTAACAAAAATCAC+GGG | + | chr6_2:73616409-73616428 | Msa0928340:intron | 30.0% | |
| GGGTATTAAGAAAATGTTGT+TGG | + | chr6_2:73616429-73616448 | Msa0928340:intron | 30.0% | |
| ! | TTGTAGAGGGTCTTATATTT+AGG | + | chr6_2:73616605-73616624 | Msa0928340:intron | 30.0% |
| CAAGTCGGTAATATTAATCA+GGG | - | chr6_2:73616769-73616788 | None:intergenic | 30.0% | |
| TTTAATATTCTCAGGCAAGT+CGG | - | chr6_2:73616784-73616803 | None:intergenic | 30.0% | |
| TTGAATGCATTTATTCGCAT+AGG | + | chr6_2:73616812-73616831 | Msa0928340:intron | 30.0% | |
| TGAATGCATTTATTCGCATA+GGG | + | chr6_2:73616813-73616832 | Msa0928340:intron | 30.0% | |
| AGGAACGTCTAACAAAAATA+TGG | - | chr6_2:73616856-73616875 | None:intergenic | 30.0% | |
| TAGTTCATAGTGTTGTCAAA+TGG | + | chr6_2:73616975-73616994 | Msa0928340:intron | 30.0% | |
| CAAATTTCAGTACTGTTCAA+TGG | - | chr6_2:73617020-73617039 | None:intergenic | 30.0% | |
| TTATGCGTGAAACTTCAATT+TGG | + | chr6_2:73617125-73617144 | Msa0928340:intron | 30.0% | |
| GAGATCAAGTACAAATAGTA+CGG | - | chr6_2:73617152-73617171 | None:intergenic | 30.0% | |
| CTATAGTTTAGGGATCAAAT+AGG | + | chr6_2:73617387-73617406 | Msa0928340:intron | 30.0% | |
| GGATCAAATAGGATAGATAA+TGG | + | chr6_2:73617398-73617417 | Msa0928340:intron | 30.0% | |
| !! | AGAGTATTGCTATTTAGTAC+GGG | - | chr6_2:73617670-73617689 | None:intergenic | 30.0% |
| AGCAATACTCTTCATGTAAT+TGG | + | chr6_2:73617679-73617698 | Msa0928340:intron | 30.0% | |
| GCAATACTCTTCATGTAATT+GGG | + | chr6_2:73617680-73617699 | Msa0928340:intron | 30.0% | |
| !! | TGTTTTTGTTTGGTTTAAGG+TGG | + | chr6_2:73617741-73617760 | Msa0928340:intron | 30.0% |
| TTGTTCAAGTATGACATGAT+TGG | - | chr6_2:73618059-73618078 | None:intergenic | 30.0% | |
| ! | TAAAGAGATTTTATACTGGC+AGG | + | chr6_2:73618102-73618121 | Msa0928340:intron | 30.0% |
| ! | AAAGAGATTTTATACTGGCA+GGG | + | chr6_2:73618103-73618122 | Msa0928340:intron | 30.0% |
| GATAACCACTTATTGCATAA+TGG | - | chr6_2:73618148-73618167 | None:intergenic | 30.0% | |
| TATATGCATTTGGGTACATA+TGG | + | chr6_2:73618215-73618234 | Msa0928340:intron | 30.0% | |
| TTGAAAAATGGAACTTGAGA+TGG | + | chr6_2:73618280-73618299 | Msa0928340:intron | 30.0% | |
| ! | TTTTCCCTACATGATTTACT+TGG | + | chr6_2:73618653-73618672 | Msa0928340:intron | 30.0% |
| ATTGCCAAGTAAATCATGTA+GGG | - | chr6_2:73618660-73618679 | None:intergenic | 30.0% | |
| TATTGCCAAGTAAATCATGT+AGG | - | chr6_2:73618661-73618680 | None:intergenic | 30.0% | |
| CATGATTTACTTGGCAATAT+TGG | + | chr6_2:73618662-73618681 | Msa0928340:intron | 30.0% | |
| ! | GTTCATTTGCTCTGAATTAT+TGG | + | chr6_2:73618689-73618708 | Msa0928340:intron | 30.0% |
| ! | TTTTGTTCATACCTTCCATA+TGG | + | chr6_2:73618722-73618741 | Msa0928340:intron | 30.0% |
| TTTGTTCATACCTTCCATAT+GGG | + | chr6_2:73618723-73618742 | Msa0928340:intron | 30.0% | |
| !! | AGTTTTGACAAAACTGTATC+TGG | + | chr6_2:73618760-73618779 | Msa0928340:intron | 30.0% |
| !! | GTTTTGACAAAACTGTATCT+GGG | + | chr6_2:73618761-73618780 | Msa0928340:intron | 30.0% |
| ! | TGTCTCTAAGAAATGAGTTA+TGG | + | chr6_2:73618872-73618891 | Msa0928340:intron | 30.0% |
| ! | GTCTCTAAGAAATGAGTTAT+GGG | + | chr6_2:73618873-73618892 | Msa0928340:intron | 30.0% |
| !! | TAATTTTTGCTGTCCTTTTC+AGG | + | chr6_2:73619079-73619098 | Msa0928340:intron | 30.0% |
| GCAAAATTCTTAAGAGCTAA+TGG | + | chr6_2:73619115-73619134 | Msa0928340:CDS | 30.0% | |
| GAACAAACATTAGAGATACT+TGG | + | chr6_2:73619160-73619179 | Msa0928340:CDS | 30.0% | |
| ATGAATCTAGCAGATCAATT+GGG | - | chr6_2:73619343-73619362 | None:intergenic | 30.0% | |
| AATGAATCTAGCAGATCAAT+TGG | - | chr6_2:73619344-73619363 | None:intergenic | 30.0% | |
| CACAAATTTCAACAACAGTT+TGG | + | chr6_2:73619446-73619465 | Msa0928340:intron | 30.0% | |
| ! | AGTAATGACGTTTAAAATCG+TGG | + | chr6_2:73619548-73619567 | Msa0928340:intron | 30.0% |
| TGTGTTCAATGGATAACTAA+TGG | + | chr6_2:73619576-73619595 | Msa0928340:intron | 30.0% | |
| GATTCGTTATGTTTAGTAGA+TGG | - | chr6_2:73619648-73619667 | None:intergenic | 30.0% | |
| ! | TAATCTACTGGCTACTTTAA+AGG | + | chr6_2:73619740-73619759 | Msa0928340:intron | 30.0% |
| ATGAAACATAGACACAAACA+CGG | - | chr6_2:73620030-73620049 | None:intergenic | 30.0% | |
| TGTTTGTGTCTATGTTTCAT+AGG | + | chr6_2:73620030-73620049 | Msa0928340:intron | 30.0% | |
| TCATAGGAAATGTATATCTC+AGG | + | chr6_2:73620046-73620065 | Msa0928340:intron | 30.0% | |
| TGTACTAAATAGACAATAGG+AGG | + | chr6_2:73620114-73620133 | Msa0928340:intron | 30.0% | |
| ! | CGAAAACCAATGTAATTTTG+AGG | - | chr6_2:73620233-73620252 | None:intergenic | 30.0% |
| GATATAAAATGTAGGTGAAG+GGG | + | chr6_2:73620358-73620377 | Msa0928340:intron | 30.0% | |
| CTCATTTACTTCTTGGAATT+TGG | + | chr6_2:73620393-73620412 | Msa0928340:CDS | 30.0% | |
| AATTTGGTCACAAGAAGAAT+CGG | + | chr6_2:73620409-73620428 | Msa0928340:CDS | 30.0% | |
| ! | GTATAGTCAATTTTCTCTAG+AGG | - | chr6_2:73620887-73620906 | None:intergenic | 30.0% |
| TAGTACAACAGTATTTGACA+TGG | - | chr6_2:73620927-73620946 | None:intergenic | 30.0% | |
| ATTGAAGAAAGAGAGAGAGA+GGG | - | chr6_2:73615558-73615577 | None:intergenic | 35.0% | |
| ! | AAGAAGAGAGTGTGAAGAAA+AGG | - | chr6_2:73615595-73615614 | None:intergenic | 35.0% |
| TGTTGTTGGAAAATGAACGA+GGG | - | chr6_2:73615650-73615669 | None:intergenic | 35.0% | |
| ! | TTGTTGTTGGAAAATGAACG+AGG | - | chr6_2:73615651-73615670 | None:intergenic | 35.0% |
| ! | AGTACATGATTGGTTGTTGT+TGG | - | chr6_2:73615664-73615683 | None:intergenic | 35.0% |
| ! | TTAGAGAGAGAGTACATGAT+TGG | - | chr6_2:73615674-73615693 | None:intergenic | 35.0% |
| ! | CCTCTCTTCAATTTTCTTCT+GGG | + | chr6_2:73615805-73615824 | Msa0928340:intron | 35.0% |
| ! | TCTTCAATTTTCTTCTGGGT+CGG | + | chr6_2:73615809-73615828 | Msa0928340:intron | 35.0% |
| !! | TGAAGGATTTGGAGTTTTCT+TGG | - | chr6_2:73615906-73615925 | None:intergenic | 35.0% |
| TATTTCATGTAATTGGGTCC+GGG | + | chr6_2:73615978-73615997 | Msa0928340:intron | 35.0% | |
| TAGTCTATACCTATGAAGCA+CGG | + | chr6_2:73616069-73616088 | Msa0928340:intron | 35.0% | |
| TAGTATAGATCTATGAGGCA+TGG | - | chr6_2:73616209-73616228 | None:intergenic | 35.0% | |
| ACTAATCCGGTTAACTTAGT+GGG | - | chr6_2:73616265-73616284 | None:intergenic | 35.0% | |
| AACTAATCCGGTTAACTTAG+TGG | - | chr6_2:73616266-73616285 | None:intergenic | 35.0% | |
| !! | ACTAAGTTAACCGGATTAGT+TGG | + | chr6_2:73616265-73616284 | Msa0928340:intron | 35.0% |
| TGTGAAGGGTCTACAAATTT+AGG | + | chr6_2:73616641-73616660 | Msa0928340:intron | 35.0% | |
| GTGAAGGGTCTACAAATTTA+GGG | + | chr6_2:73616642-73616661 | Msa0928340:intron | 35.0% | |
| TCTACAAATTTAGGGATGGA+GGG | + | chr6_2:73616650-73616669 | Msa0928340:intron | 35.0% | |
| TTTAAATGGTCTGTGGACAA+CGG | - | chr6_2:73616683-73616702 | None:intergenic | 35.0% | |
| GCAAGTCGGTAATATTAATC+AGG | - | chr6_2:73616770-73616789 | None:intergenic | 35.0% | |
| TGTTAGACGTTCCTGTAATA+AGG | + | chr6_2:73616862-73616881 | Msa0928340:intron | 35.0% | |
| GTTAGACGTTCCTGTAATAA+GGG | + | chr6_2:73616863-73616882 | Msa0928340:intron | 35.0% | |
| TTCATAGTGTTGTCAAATGG+TGG | + | chr6_2:73616978-73616997 | Msa0928340:intron | 35.0% | |
| AATACAATTAAGGCGGTTAG+CGG | - | chr6_2:73617578-73617597 | None:intergenic | 35.0% | |
| ! | TTTGTTTGGTTTAAGGTGGT+CGG | + | chr6_2:73617745-73617764 | Msa0928340:intron | 35.0% |
| ! | TATAAAGGCATATGCAATGG+CGG | + | chr6_2:73617775-73617794 | Msa0928340:CDS | 35.0% |
| !!! | CTCATGGGGATTTTAATTGA+AGG | + | chr6_2:73617848-73617867 | Msa0928340:CDS | 35.0% |
| ! | AATGCATTTCTCTTTTCGCA+TGG | + | chr6_2:73617930-73617949 | Msa0928340:intron | 35.0% |
| ! | AACTTTTCCAAGATAGTGCT+TGG | + | chr6_2:73617973-73617992 | Msa0928340:intron | 35.0% |
| ! | AAGGTGCTTAATCGCATTTA+GGG | - | chr6_2:73618460-73618479 | None:intergenic | 35.0% |
| !! | AAAGGTGCTTAATCGCATTT+AGG | - | chr6_2:73618461-73618480 | None:intergenic | 35.0% |
| ! | AAATGCGATTAAGCACCTTT+TGG | + | chr6_2:73618461-73618480 | Msa0928340:intron | 35.0% |
| CTTATAACAAATGATGCCAG+TGG | - | chr6_2:73618511-73618530 | None:intergenic | 35.0% | |
| TTATAAGTTCGTTTCCGATC+CGG | + | chr6_2:73618524-73618543 | Msa0928340:intron | 35.0% | |
| AGTCTTTCTACATCCATTCT+TGG | - | chr6_2:73618601-73618620 | None:intergenic | 35.0% | |
| ! | CATTTGCTCTGAATTATTGG+TGG | + | chr6_2:73618692-73618711 | Msa0928340:intron | 35.0% |
| GTCAAAACTCAAGAACATCT+TGG | - | chr6_2:73618749-73618768 | None:intergenic | 35.0% | |
| TTAAAATTGGATGCGTAGAC+CGG | + | chr6_2:73618833-73618852 | Msa0928340:intron | 35.0% | |
| CCAAGATCCTTCCATTTATT+CGG | + | chr6_2:73618999-73619018 | Msa0928340:intron | 35.0% | |
| ACAACTTCCTTCCGAATAAA+TGG | - | chr6_2:73619013-73619032 | None:intergenic | 35.0% | |
| !!! | AAGGAAGTTGTGTTGTTTTC+AGG | + | chr6_2:73619022-73619041 | Msa0928340:intron | 35.0% |
| !!! | AGTTGTGTTGTTTTCAGGTT+TGG | + | chr6_2:73619027-73619046 | Msa0928340:intron | 35.0% |
| ATCAAATGCTGAACAACGTA+TGG | - | chr6_2:73619059-73619078 | None:intergenic | 35.0% | |
| AGCTTTACTTGTTCCTGAAA+AGG | - | chr6_2:73619095-73619114 | None:intergenic | 35.0% | |
| CTTAATGAGACATCAAAGTC+AGG | + | chr6_2:73619259-73619278 | Msa0928340:CDS | 35.0% | |
| AAGTCAGGTATGGATGATTT+AGG | + | chr6_2:73619274-73619293 | Msa0928340:intron | 35.0% | |
| TAGCAGATCAATTGGGAAAA+TGG | - | chr6_2:73619336-73619355 | None:intergenic | 35.0% | |
| TGCTAGATTCATTGTTCTGT+TGG | + | chr6_2:73619351-73619370 | Msa0928340:intron | 35.0% | |
| TAGATTCATTGTTCTGTTGG+TGG | + | chr6_2:73619354-73619373 | Msa0928340:intron | 35.0% | |
| CACAACGCTAATTAATCTAC+TGG | + | chr6_2:73619728-73619747 | Msa0928340:intron | 35.0% | |
| ! | CAACCATTTTCTAACAGATC+AGG | - | chr6_2:73619825-73619844 | None:intergenic | 35.0% |
| CTCAATAAGGAGTGAAAATC+AGG | + | chr6_2:73619893-73619912 | Msa0928340:intron | 35.0% | |
| ACTCAAGTAGACTATCAACA+TGG | - | chr6_2:73619978-73619997 | None:intergenic | 35.0% | |
| TGTATATCTCAGGAGATAGT+AGG | + | chr6_2:73620056-73620075 | Msa0928340:intron | 35.0% | |
| TTCCTCCCTCAAAATTACAT+TGG | + | chr6_2:73620224-73620243 | Msa0928340:intron | 35.0% | |
| !! | AACCAATGTAATTTTGAGGG+AGG | - | chr6_2:73620229-73620248 | None:intergenic | 35.0% |
| AACGTGACTCATTTACTTCT+TGG | + | chr6_2:73620386-73620405 | Msa0928340:CDS | 35.0% | |
| !! | TGCTGTTTCAGCAATTTCTT+TGG | - | chr6_2:73620480-73620499 | None:intergenic | 35.0% |
| GATAACCGGAATCAAACTAA+CGG | + | chr6_2:73620658-73620677 | Msa0928340:intron | 35.0% | |
| TTATGTTTCTTGTAGGCTAG+TGG | + | chr6_2:73620797-73620816 | Msa0928340:intron | 35.0% | |
| ! | AAGCAAGCGTAAGAATTTTC+CGG | + | chr6_2:73620842-73620861 | Msa0928340:exon | 35.0% |
| TGTTACAAGGGAAAAACAGA+AGG | - | chr6_2:73621046-73621065 | None:intergenic | 35.0% | |
| ! | AAAGAGAGAGAGAGGGTTTT+GGG | - | chr6_2:73615551-73615570 | None:intergenic | 40.0% |
| CATTGAAGAAAGAGAGAGAG+AGG | - | chr6_2:73615559-73615578 | None:intergenic | 40.0% | |
| CTCTCTCTCTCTTTCTTCAA+TGG | + | chr6_2:73615557-73615576 | Msa0928340:exon | 40.0% | |
| GTGTGAAGAAAAGGTTGGAA+TGG | - | chr6_2:73615586-73615605 | None:intergenic | 40.0% | |
| ! | AGAGAGTGTGAAGAAAAGGT+TGG | - | chr6_2:73615591-73615610 | None:intergenic | 40.0% |
| CTCTCTCTAACTTCTCTCTT+TGG | + | chr6_2:73615684-73615703 | Msa0928340:CDS | 40.0% | |
| ! | CGGAAGTTTGTGATGGAAAT+GGG | - | chr6_2:73615732-73615751 | None:intergenic | 40.0% |
| ! | ACGGAAGTTTGTGATGGAAA+TGG | - | chr6_2:73615733-73615752 | None:intergenic | 40.0% |
| TGAAGAGAGGCAAGAACTTA+CGG | - | chr6_2:73615795-73615814 | None:intergenic | 40.0% | |
| ! | GCCTCTCTTCAATTTTCTTC+TGG | + | chr6_2:73615804-73615823 | Msa0928340:intron | 40.0% |
| CCCAGAAGAAAATTGAAGAG+AGG | - | chr6_2:73615808-73615827 | None:intergenic | 40.0% | |
| CTAATCCGGTTAACTTAGTG+GGG | - | chr6_2:73616264-73616283 | None:intergenic | 40.0% | |
| AGGGTCTACAAATTTAGGGA+TGG | + | chr6_2:73616646-73616665 | Msa0928340:intron | 40.0% | |
| GTCTACAAATTTAGGGATGG+AGG | + | chr6_2:73616649-73616668 | Msa0928340:intron | 40.0% | |
| TTAAATGGTCTGTGGACAAC+GGG | - | chr6_2:73616682-73616701 | None:intergenic | 40.0% | |
| TTCCTGTAATAAGGGATGGA+GGG | + | chr6_2:73616871-73616890 | Msa0928340:intron | 40.0% | |
| ACTGTTATAGCCGAGCTATA+CGG | + | chr6_2:73616898-73616917 | Msa0928340:intron | 40.0% | |
| !! | TTGTCAAATGGTGGCTTTAG+CGG | + | chr6_2:73616987-73617006 | Msa0928340:intron | 40.0% |
| ! | AGTGTTATTCTTCGCTTTCG+TGG | - | chr6_2:73617537-73617556 | None:intergenic | 40.0% |
| ! | GGCTATAAAGGCATATGCAA+TGG | + | chr6_2:73617772-73617791 | Msa0928340:CDS | 40.0% |
| TCTTAAGCCAAGCACTATCT+TGG | - | chr6_2:73617983-73618002 | None:intergenic | 40.0% | |
| AGGTGCTTAATCGCATTTAG+GGG | - | chr6_2:73618459-73618478 | None:intergenic | 40.0% | |
| ! | TTTTGATATGCACCATCCAC+TGG | + | chr6_2:73618492-73618511 | Msa0928340:intron | 40.0% |
| TAACAAATGATGCCAGTGGA+TGG | - | chr6_2:73618507-73618526 | None:intergenic | 40.0% | |
| !!! | TATTTTGGCTTGCTTACGTC+CGG | - | chr6_2:73618546-73618565 | None:intergenic | 40.0% |
| !! | ACAACAGTGTTGACACTTTC+CGG | - | chr6_2:73618855-73618874 | None:intergenic | 40.0% |
| CCGAATAAATGGAAGGATCT+TGG | - | chr6_2:73619002-73619021 | None:intergenic | 40.0% | |
| GATCCTTCCATTTATTCGGA+AGG | + | chr6_2:73619003-73619022 | Msa0928340:intron | 40.0% | |
| CTTCCTTCCGAATAAATGGA+AGG | - | chr6_2:73619009-73619028 | None:intergenic | 40.0% | |
| AATGCTGAACAACGTATGGA+AGG | - | chr6_2:73619055-73619074 | None:intergenic | 40.0% | |
| AGATACTTGGGAAATCTGAC+TGG | + | chr6_2:73619173-73619192 | Msa0928340:CDS | 40.0% | |
| !! | CAGTCAAAGAAAGTACCACA+GGG | - | chr6_2:73619210-73619229 | None:intergenic | 40.0% |
| !! | TCAGTCAAAGAAAGTACCAC+AGG | - | chr6_2:73619211-73619230 | None:intergenic | 40.0% |
| ACTTCATAAAGCCCTCGATT+GGG | + | chr6_2:73619234-73619253 | Msa0928340:CDS | 40.0% | |
| TGAGACATCAAAGTCAGGTA+TGG | + | chr6_2:73619264-73619283 | Msa0928340:intron | 40.0% | |
| ATCAATTGGGAAAATGGCAG+GGG | - | chr6_2:73619330-73619349 | None:intergenic | 40.0% | |
| GATCAATTGGGAAAATGGCA+GGG | - | chr6_2:73619331-73619350 | None:intergenic | 40.0% | |
| AGATCAATTGGGAAAATGGC+AGG | - | chr6_2:73619332-73619351 | None:intergenic | 40.0% | |
| !! | TTCATTGTTCTGTTGGTGGT+AGG | + | chr6_2:73619358-73619377 | Msa0928340:intron | 40.0% |
| !! | TCATTGTTCTGTTGGTGGTA+GGG | + | chr6_2:73619359-73619378 | Msa0928340:intron | 40.0% |
| AACAACAGTTTGGATGATGC+AGG | + | chr6_2:73619456-73619475 | Msa0928340:intron | 40.0% | |
| TCGTGGTTAAGTGTGTTCAA+TGG | + | chr6_2:73619565-73619584 | Msa0928340:intron | 40.0% | |
| GTGCCTGATCTGTTAGAAAA+TGG | + | chr6_2:73619819-73619838 | Msa0928340:intron | 40.0% | |
| TTTCACTCCTTATTGAGCAG+CGG | - | chr6_2:73619890-73619909 | None:intergenic | 40.0% | |
| TCTAGTGAGCTAGTTGAATG+TGG | + | chr6_2:73620150-73620169 | Msa0928340:intron | 40.0% | |
| CTAGTGAGCTAGTTGAATGT+GGG | + | chr6_2:73620151-73620170 | Msa0928340:intron | 40.0% | |
| GAAAATGTTTGAACCTACCG+TGG | + | chr6_2:73620597-73620616 | Msa0928340:intron | 40.0% | |
| TCATGAAGTCCGGTTGAATT+TGG | - | chr6_2:73620640-73620659 | None:intergenic | 40.0% | |
| ATTCCGGTTATCATGAAGTC+CGG | - | chr6_2:73620650-73620669 | None:intergenic | 40.0% | |
| ! | ATAGTCATTGAGGTGTCAGT+CGG | - | chr6_2:73620767-73620786 | None:intergenic | 40.0% |
| AGGCTAGTGGTGATATTGAT+TGG | + | chr6_2:73620810-73620829 | Msa0928340:intron | 40.0% | |
| ! | AGCAAGCGTAAGAATTTTCC+GGG | + | chr6_2:73620843-73620862 | Msa0928340:exon | 40.0% |
| AACTTGTATCGCTTTATCCC+CGG | - | chr6_2:73620864-73620883 | None:intergenic | 40.0% | |
| ! | TTTTCGCAGTAGTGTGATTG+TGG | + | chr6_2:73621002-73621021 | Msa0928340:three_prime_UTR | 40.0% |
| ! | AAGAGAGAGAGAGGGTTTTG+GGG | - | chr6_2:73615550-73615569 | None:intergenic | 45.0% |
| ! | GAAAGAGAGAGAGAGGGTTT+TGG | - | chr6_2:73615552-73615571 | None:intergenic | 45.0% |
| !! | AGTGTGTTGGTGTTGGTGTT+GGG | - | chr6_2:73615624-73615643 | None:intergenic | 45.0% |
| ! | TTGTGATGGAAATGGGTCGT+TGG | - | chr6_2:73615725-73615744 | None:intergenic | 45.0% |
| GAAGAGAGGCAAGAACTTAC+GGG | - | chr6_2:73615794-73615813 | None:intergenic | 45.0% | |
| TGTTGCAGGAATCCACAATC+TGG | + | chr6_2:73615875-73615894 | Msa0928340:intron | 45.0% | |
| TTCTTGGATTCGCCAGATTG+TGG | - | chr6_2:73615890-73615909 | None:intergenic | 45.0% | |
| TAGACGTGTCAGTGTCATCT+TGG | + | chr6_2:73616143-73616162 | Msa0928340:intron | 45.0% | |
| GCATGGACACTCTTTGGATT+AGG | - | chr6_2:73616192-73616211 | None:intergenic | 45.0% | |
| TATGAGGCATGGACACTCTT+TGG | - | chr6_2:73616198-73616217 | None:intergenic | 45.0% | |
| TTGAGCCCCACTAAGTTAAC+CGG | + | chr6_2:73616256-73616275 | Msa0928340:intron | 45.0% | |
| GGCTCAAGTACCAACTAATC+CGG | - | chr6_2:73616278-73616297 | None:intergenic | 45.0% | |
| GACGTTCCTGTAATAAGGGA+TGG | + | chr6_2:73616867-73616886 | Msa0928340:intron | 45.0% | |
| GTTCCTGTAATAAGGGATGG+AGG | + | chr6_2:73616870-73616889 | Msa0928340:intron | 45.0% | |
| AAACCTGTAGCCGTATAGCT+CGG | - | chr6_2:73616911-73616930 | None:intergenic | 45.0% | |
| AGAGCTTCGGTTCCTACTTT+AGG | - | chr6_2:73617827-73617846 | None:intergenic | 45.0% | |
| AATCCCCATGAGAAGAGCTT+CGG | - | chr6_2:73617840-73617859 | None:intergenic | 45.0% | |
| ! | AATCGCATTTAGGGGGCATA+TGG | - | chr6_2:73618451-73618470 | None:intergenic | 45.0% |
| GGTGCTTAATCGCATTTAGG+GGG | - | chr6_2:73618458-73618477 | None:intergenic | 45.0% | |
| AACATCTTGGCCCATATGGA+AGG | - | chr6_2:73618736-73618755 | None:intergenic | 45.0% | |
| CAAGAACATCTTGGCCCATA+TGG | - | chr6_2:73618740-73618759 | None:intergenic | 45.0% | |
| ! | CAATCGAGGGCTTTATGAAG+TGG | - | chr6_2:73619235-73619254 | None:intergenic | 45.0% |
| CACTTCATAAAGCCCTCGAT+TGG | + | chr6_2:73619233-73619252 | Msa0928340:CDS | 45.0% | |
| CTCATTAAGTGCCCAATCGA+GGG | - | chr6_2:73619248-73619267 | None:intergenic | 45.0% | |
| TCTCATTAAGTGCCCAATCG+AGG | - | chr6_2:73619249-73619268 | None:intergenic | 45.0% | |
| TCAATTGGGAAAATGGCAGG+GGG | - | chr6_2:73619329-73619348 | None:intergenic | 45.0% | |
| TTATTCCCCGCTGCTCAATA+AGG | + | chr6_2:73619880-73619899 | Msa0928340:intron | 45.0% | |
| TTCACTCCTTATTGAGCAGC+GGG | - | chr6_2:73619889-73619908 | None:intergenic | 45.0% | |
| CACGGACAGTAAACAAACTG+AGG | - | chr6_2:73620012-73620031 | None:intergenic | 45.0% | |
| GTTGAATGTGGGAGACTTTC+AGG | + | chr6_2:73620162-73620181 | Msa0928340:intron | 45.0% | |
| ! | CGAAAGGTCTTGTCTGCTTT+AGG | + | chr6_2:73620437-73620456 | Msa0928340:CDS | 45.0% |
| !! | CGGTTGAATTTGGCTTGAAC+CGG | - | chr6_2:73620630-73620649 | None:intergenic | 45.0% |
| CGGTTCAAGCCAAATTCAAC+CGG | + | chr6_2:73620628-73620647 | Msa0928340:intron | 45.0% | |
| CAACCGGACTTCATGATAAC+CGG | + | chr6_2:73620644-73620663 | Msa0928340:intron | 45.0% | |
| ! | GTTCGCCGTTAGTTTGATTC+CGG | - | chr6_2:73620666-73620685 | None:intergenic | 45.0% |
| TGTCCTATTCCCGGTTCTAT+CGG | + | chr6_2:73620686-73620705 | Msa0928340:intron | 45.0% | |
| CTAGTTCAACCGATAGAACC+GGG | - | chr6_2:73620698-73620717 | None:intergenic | 45.0% | |
| GCTAGTTCAACCGATAGAAC+CGG | - | chr6_2:73620699-73620718 | None:intergenic | 45.0% | |
| ! | GTTCTATCGGTTGAACTAGC+TGG | + | chr6_2:73620699-73620718 | Msa0928340:intron | 45.0% |
| ! | GCAAGCGTAAGAATTTTCCG+GGG | + | chr6_2:73620844-73620863 | Msa0928340:exon | 45.0% |
| !! | ATAATAAATTAATACAATTA+AGG | - | chr6_2:73617588-73617607 | None:intergenic | 5.0% |
| !! | GGTGTGCTTTTGGGTGGTAT+TGG | - | chr6_2:73615527-73615546 | None:intergenic | 50.0% |
| !!! | GTTTTGGGGGGTGTGCTTTT+GGG | - | chr6_2:73615536-73615555 | None:intergenic | 50.0% |
| !! | AGAGAGAGAGAGGGTTTTGG+GGG | - | chr6_2:73615549-73615568 | None:intergenic | 50.0% |
| !! | GAGTGTGTTGGTGTTGGTGT+TGG | - | chr6_2:73615625-73615644 | None:intergenic | 50.0% |
| ! | AGGGAAGAGTGTGTTGGTGT+TGG | - | chr6_2:73615631-73615650 | None:intergenic | 50.0% |
| ! | TGAACGAGGGAAGAGTGTGT+TGG | - | chr6_2:73615637-73615656 | None:intergenic | 50.0% |
| AGTGGCACGGAAGTTTGTGA+TGG | - | chr6_2:73615739-73615758 | None:intergenic | 50.0% | |
| !! | CTTCCGTGCCACTTCAGAAA+CGG | + | chr6_2:73615746-73615765 | Msa0928340:CDS | 50.0% |
| ! | AAACGGCACCGTTTCTGAAG+TGG | - | chr6_2:73615757-73615776 | None:intergenic | 50.0% |
| GGGTCAGTGGGGAGATTAAA+CGG | - | chr6_2:73615774-73615793 | None:intergenic | 50.0% | |
| CAAGAACTTACGGGTCAGTG+GGG | - | chr6_2:73615785-73615804 | None:intergenic | 50.0% | |
| GCAAGAACTTACGGGTCAGT+GGG | - | chr6_2:73615786-73615805 | None:intergenic | 50.0% | |
| ! | CTTGAGAGGAGCACACTCAT+AGG | - | chr6_2:73616005-73616024 | None:intergenic | 50.0% |
| CTATGAGTGTGCTCCTCTCA+AGG | + | chr6_2:73616003-73616022 | Msa0928340:intron | 50.0% | |
| TGTCAGTGTCCGTGCTTCAT+AGG | - | chr6_2:73616081-73616100 | None:intergenic | 50.0% | |
| ! | TCTTGGTGTGTCGTGTCCAA+CGG | + | chr6_2:73616160-73616179 | Msa0928340:intron | 50.0% |
| ! | TTGGATTAGGCGTGTTCCGT+TGG | - | chr6_2:73616179-73616198 | None:intergenic | 50.0% |
| TAGTGGGGCTCAATTGAAGC+CGG | - | chr6_2:73616249-73616268 | None:intergenic | 50.0% | |
| CTCCCTCCATCCCTTATTAC+AGG | - | chr6_2:73616876-73616895 | None:intergenic | 50.0% | |
| AGGCGGTTAGCGGAAATCAT+GGG | - | chr6_2:73617568-73617587 | None:intergenic | 50.0% | |
| AAGGCGGTTAGCGGAAATCA+TGG | - | chr6_2:73617569-73617588 | None:intergenic | 50.0% | |
| GCACTGTATCGTGTCTTTCG+TGG | + | chr6_2:73617636-73617655 | Msa0928340:intron | 50.0% | |
| ! | TTGGTTTAAGGTGGTCGGCA+AGG | + | chr6_2:73617750-73617769 | Msa0928340:intron | 50.0% |
| ! | TGGTTTAAGGTGGTCGGCAA+GGG | + | chr6_2:73617751-73617770 | Msa0928340:intron | 50.0% |
| ! | CAATGGCGGAGTTGGAAACA+AGG | + | chr6_2:73617789-73617808 | Msa0928340:CDS | 50.0% |
| AGGAACCGAAGCTCTTCTCA+TGG | + | chr6_2:73617832-73617851 | Msa0928340:CDS | 50.0% | |
| GGAACCGAAGCTCTTCTCAT+GGG | + | chr6_2:73617833-73617852 | Msa0928340:CDS | 50.0% | |
| GAACCGAAGCTCTTCTCATG+GGG | + | chr6_2:73617834-73617853 | Msa0928340:CDS | 50.0% | |
| !! | CAAAGAAAGTACCACAGGGC+TGG | - | chr6_2:73619206-73619225 | None:intergenic | 50.0% |
| TCACTCCTTATTGAGCAGCG+GGG | - | chr6_2:73619888-73619907 | None:intergenic | 50.0% | |
| TGGTCACAAGAAGAATCGGC+AGG | + | chr6_2:73620413-73620432 | Msa0928340:CDS | 50.0% | |
| AGAAGAATCGGCAGGTCGAA+AGG | + | chr6_2:73620421-73620440 | Msa0928340:CDS | 50.0% | |
| AACCTACCGTGGTTCAACTC+CGG | + | chr6_2:73620608-73620627 | Msa0928340:intron | 50.0% | |
| CTTGAACCGGAGTTGAACCA+CGG | - | chr6_2:73620617-73620636 | None:intergenic | 50.0% | |
| CAACCGATAGAACCGGGAAT+AGG | - | chr6_2:73620692-73620711 | None:intergenic | 50.0% | |
| !!! | GGTTTTGGGGGGTGTGCTTT+TGG | - | chr6_2:73615537-73615556 | None:intergenic | 55.0% |
| !!! | GAGAGAGAGAGGGTTTTGGG+GGG | - | chr6_2:73615548-73615567 | None:intergenic | 55.0% |
| !! | GCACCGTTTCTGAAGTGGCA+CGG | - | chr6_2:73615752-73615771 | None:intergenic | 55.0% |
| GGCAAGAACTTACGGGTCAG+TGG | - | chr6_2:73615787-73615806 | None:intergenic | 55.0% | |
| ! | AGGAGCACACTCATAGGTCC+CGG | - | chr6_2:73615999-73616018 | None:intergenic | 55.0% |
| GTGTGCTCCTCTCAAGGTCT+CGG | + | chr6_2:73616009-73616028 | Msa0928340:intron | 55.0% | |
| TGTGCTCCTCTCAAGGTCTC+GGG | + | chr6_2:73616010-73616029 | Msa0928340:intron | 55.0% | |
| ATCGAACCCGAGACCTTGAG+AGG | - | chr6_2:73616019-73616038 | None:intergenic | 55.0% | |
| TAGCCGAGCTATACGGCTAC+AGG | + | chr6_2:73616905-73616924 | Msa0928340:intron | 55.0% | |
| GTGGTCGGCAAGGGCTATAA+AGG | + | chr6_2:73617760-73617779 | Msa0928340:CDS | 55.0% | |
| ! | GGCATATGCAATGGCGGAGT+TGG | + | chr6_2:73617781-73617800 | Msa0928340:CDS | 55.0% |
| !! | TGGCTTGCTTACGTCCGGAT+CGG | - | chr6_2:73618541-73618560 | None:intergenic | 55.0% |
| AACCGGAGTTGAACCACGGT+AGG | - | chr6_2:73620613-73620632 | None:intergenic | 55.0% | |
| ACGGCGAACTGTCCTATTCC+CGG | + | chr6_2:73620677-73620696 | Msa0928340:intron | 55.0% | |
| !! | TTGGGGGGTGTGCTTTTGGG+TGG | - | chr6_2:73615533-73615552 | None:intergenic | 60.0% |
| CTGGTACTACTCCAGCCCTG+TGG | + | chr6_2:73619192-73619211 | Msa0928340:CDS | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr6_2 | gene | 73615474 | 73621099 | 73615474 | ID=Msa0928340;Name=Msa0928340 |
| chr6_2 | mRNA | 73615474 | 73621099 | 73615474 | ID=Msa0928340-mRNA-1;Parent=Msa0928340;Name=Msa0928340-mRNA-1;_AED=0.01;_eAED=0.01;_QI=102|1|1|1|1|1|6|246|240 |
| chr6_2 | exon | 73615474 | 73615793 | 73615474 | ID=Msa0928340-mRNA-1:exon:12540;Parent=Msa0928340-mRNA-1 |
| chr6_2 | exon | 73615883 | 73615927 | 73615883 | ID=Msa0928340-mRNA-1:exon:12541;Parent=Msa0928340-mRNA-1 |
| chr6_2 | exon | 73617760 | 73617869 | 73617760 | ID=Msa0928340-mRNA-1:exon:12542;Parent=Msa0928340-mRNA-1 |
| chr6_2 | exon | 73619101 | 73619280 | 73619101 | ID=Msa0928340-mRNA-1:exon:12543;Parent=Msa0928340-mRNA-1 |
| chr6_2 | exon | 73620372 | 73620499 | 73620372 | ID=Msa0928340-mRNA-1:exon:12544;Parent=Msa0928340-mRNA-1 |
| chr6_2 | exon | 73620812 | 73621099 | 73620812 | ID=Msa0928340-mRNA-1:exon:12545;Parent=Msa0928340-mRNA-1 |
| chr6_2 | five_prime_UTR | 73615474 | 73615575 | 73615474 | ID=Msa0928340-mRNA-1:five_prime_utr;Parent=Msa0928340-mRNA-1 |
| chr6_2 | CDS | 73615576 | 73615793 | 73615576 | ID=Msa0928340-mRNA-1:cds;Parent=Msa0928340-mRNA-1 |
| chr6_2 | CDS | 73615883 | 73615927 | 73615883 | ID=Msa0928340-mRNA-1:cds;Parent=Msa0928340-mRNA-1 |
| chr6_2 | CDS | 73617760 | 73617869 | 73617760 | ID=Msa0928340-mRNA-1:cds;Parent=Msa0928340-mRNA-1 |
| chr6_2 | CDS | 73619101 | 73619280 | 73619101 | ID=Msa0928340-mRNA-1:cds;Parent=Msa0928340-mRNA-1 |
| chr6_2 | CDS | 73620372 | 73620499 | 73620372 | ID=Msa0928340-mRNA-1:cds;Parent=Msa0928340-mRNA-1 |
| chr6_2 | CDS | 73620812 | 73620853 | 73620812 | ID=Msa0928340-mRNA-1:cds;Parent=Msa0928340-mRNA-1 |
| chr6_2 | three_prime_UTR | 73620854 | 73621099 | 73620854 | ID=Msa0928340-mRNA-1:three_prime_utr;Parent=Msa0928340-mRNA-1 |
| Gene Sequence |
| Protein sequence |
