AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0928360


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0928360 MtrunA17_Chr6g0475931 87.805 246 19 3 1 240 1 241 3.97e-148 412
Msa0928360 MtrunA17_Chr5g0398561 50.898 167 76 4 59 223 59 221 2.10e-49 162
Msa0928360 MtrunA17_Chr3g0135231 30.159 126 86 1 89 214 86 209 5.74e-11 62.0
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0928360 AT4G25370.1 49.345 229 105 7 18 240 14 237 1.08e-64 201
Msa0928360 AT4G12060.1 47.907 215 102 6 25 233 30 240 5.40e-51 166

Find 70 sgRNAs with CRISPR-Local

Find 353 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
AACGTGACTCATTTACTTCT+TGG 0.193512 6_2:-73745916 Msa0928360:CDS
CTCATTTACTTCTTGGAATT+TGG 0.207345 6_2:-73745909 Msa0928360:CDS
AAAACTCACTTTGAAGGATT+TGG 0.216298 6_2:+73750327 None:intergenic
TGCTGTTTCAGCAATTTCTT+TGG 0.256036 6_2:+73745825 None:intergenic
AGAGCTTCGGTTCCTACTTT+AGG 0.268153 6_2:+73748478 None:intergenic
CTCTCTCTAACTTCTCTCTT+TGG 0.296798 6_2:-73750564 Msa0928360:CDS
CGAAAGGTCTTGTCTGCTTT+AGG 0.302687 6_2:-73745865 Msa0928360:CDS
GCAAAATTCTTAAGAGCTAA+TGG 0.310722 6_2:-73747187 Msa0928360:CDS
GAGTGTGTTGGTGTTGGTGT+TGG 0.384065 6_2:+73750626 None:intergenic
GGCATATGCAATGGCGGAGT+TGG 0.395307 6_2:-73748521 Msa0928360:CDS
AGTGTGTTGGTGTTGGTGTT+GGG 0.402794 6_2:+73750627 None:intergenic
AAGAAGAGAGTGTGAAGAAA+AGG 0.405397 6_2:+73750656 None:intergenic
TTAGAGAGAGAGTACATGAT+TGG 0.409045 6_2:+73750577 None:intergenic
GGGTCAGTGGGGAGATTAAA+CGG 0.441953 6_2:+73750477 None:intergenic
CGGAAGTTTGTGATGGAAAT+GGG 0.449096 6_2:+73750519 None:intergenic
GTGGTCGGCAAGGGCTATAA+AGG 0.454223 6_2:-73748542 Msa0928360:CDS
ACGGAAGTTTGTGATGGAAA+TGG 0.456130 6_2:+73750518 None:intergenic
AGGCTAGTGGTGATATTGAT+TGG 0.457256 6_2:-73745492 Msa0928360:CDS
AGAGAGTGTGAAGAAAAGGT+TGG 0.483166 6_2:+73750660 None:intergenic
TGGTTTAAGGTGGTCGGCAA+GGG 0.483961 6_2:-73748551 Msa0928360:intron
GTGTGAAGAAAAGGTTGGAA+TGG 0.488637 6_2:+73750665 None:intergenic
GGCAAGAACTTACGGGTCAG+TGG 0.493455 6_2:+73750464 None:intergenic
GAACAAACATTAGAGATACT+TGG 0.494086 6_2:-73747142 Msa0928360:CDS
TTTGTTTGGTTTAAGGTGGT+CGG 0.498643 6_2:-73748557 Msa0928360:intron
CACTTCATAAAGCCCTCGAT+TGG 0.501232 6_2:-73747069 Msa0928360:CDS
TTGGTTTAAGGTGGTCGGCA+AGG 0.507786 6_2:-73748552 Msa0928360:intron
AATCCCCATGAGAAGAGCTT+CGG 0.510732 6_2:+73748465 None:intergenic
TTCTTGGGTTCACCAGATTG+TGG 0.512112 6_2:+73750354 None:intergenic
GAGAGTACATGATTGGTTGT+TGG 0.512660 6_2:+73750584 None:intergenic
GGAACCGAAGCTCTTCTCAT+GGG 0.514916 6_2:-73748469 Msa0928360:CDS
AAACTTAAGTATCCTAAAGT+AGG 0.518801 6_2:-73748490 Msa0928360:CDS
CAAAGAAAGTACCACAGGGC+TGG 0.521979 6_2:+73747099 None:intergenic
AATTTGGTCACAAGAAGAAT+CGG 0.524470 6_2:-73745893 Msa0928360:CDS
CTTAATGAGACATCAAAGTC+AGG 0.528570 6_2:-73747043 Msa0928360:intron
CTTCCGTGCCACTTCAGAAA+CGG 0.530041 6_2:-73750502 Msa0928360:CDS
GCAAGAACTTACGGGTCAGT+GGG 0.531070 6_2:+73750465 None:intergenic
AACTTGTATCGCTTTATCCC+CGG 0.534663 6_2:+73745441 None:intergenic
AAACGGCACCGTTTCTGAAG+TGG 0.536415 6_2:+73750494 None:intergenic
ACTTCATAAAGCCCTCGATT+GGG 0.536661 6_2:-73747068 Msa0928360:CDS
AACAAACATTAGAGATACTT+GGG 0.539478 6_2:-73747141 Msa0928360:CDS
TGTTGCAGGAATCCACAATC+TGG 0.541843 6_2:-73750366 Msa0928360:intron
TGATATAAAATGTAGGTGAA+GGG 0.544707 6_2:-73745945 Msa0928360:intron
TTATGTTTCTTGTAGGCTAG+TGG 0.544994 6_2:-73745505 Msa0928360:intron
CTCATTAAGTGCCCAATCGA+GGG 0.546784 6_2:+73747057 None:intergenic
TCAGTCAAAGAAAGTACCAC+AGG 0.556367 6_2:+73747094 None:intergenic
GATATAAAATGTAGGTGAAG+GGG 0.556811 6_2:-73745944 Msa0928360:intron
AGAAGAATCGGCAGGTCGAA+AGG 0.557152 6_2:-73745881 Msa0928360:CDS
CAATGGCGGAGTTGGAAACA+AGG 0.558511 6_2:-73748513 Msa0928360:CDS
CAATCGAGGGCTTTATGAAG+TGG 0.559203 6_2:+73747070 None:intergenic
AGTACATGATTGGTTGTTGG+TGG 0.563034 6_2:+73750587 None:intergenic
TTTGACATGGAAATCTAAAG+AGG 0.570570 6_2:+73745391 None:intergenic
AGGGAAGAGTGTGTTGGTGT+TGG 0.571855 6_2:+73750620 None:intergenic
AGGAACCGAAGCTCTTCTCA+TGG 0.574875 6_2:-73748470 Msa0928360:CDS
GGCTATAAAGGCATATGCAA+TGG 0.582460 6_2:-73748530 Msa0928360:CDS
TTGTGATGGAAATGGGTCGT+TGG 0.585176 6_2:+73750526 None:intergenic
TGGTCACAAGAAGAATCGGC+AGG 0.599189 6_2:-73745889 Msa0928360:CDS
AGATACTTGGGAAATCTGAC+TGG 0.600934 6_2:-73747129 Msa0928360:CDS
TCTCATTAAGTGCCCAATCG+AGG 0.607236 6_2:+73747056 None:intergenic
TTGACATGGAAATCTAAAGA+GGG 0.630237 6_2:+73745392 None:intergenic
TGAACGAGGGAAGAGTGTGT+TGG 0.642034 6_2:+73750614 None:intergenic
GAACCGAAGCTCTTCTCATG+GGG 0.645463 6_2:-73748468 Msa0928360:CDS
GCACCGTTTCTGAAGTGGCA+CGG 0.660995 6_2:+73750499 None:intergenic
AGTGGCACGGAAGTTTGTGA+TGG 0.665152 6_2:+73750512 None:intergenic
TATAAAGGCATATGCAATGG+CGG 0.665721 6_2:-73748527 Msa0928360:CDS
TTGTTGGTGGAGAATGAACG+AGG 0.665916 6_2:+73750600 None:intergenic
TAGTACAACAGTATTTGACA+TGG 0.674608 6_2:+73745378 None:intergenic
CAGTCAAAGAAAGTACCACA+GGG 0.683176 6_2:+73747095 None:intergenic
CTGGTACTACTCCAGCCCTG+TGG 0.699262 6_2:-73747110 Msa0928360:CDS
CAAGAACTTACGGGTCAGTG+GGG 0.712403 6_2:+73750466 None:intergenic
TGTTGGTGGAGAATGAACGA+GGG 0.723085 6_2:+73750601 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TCACAAAAAAAAAAAAAAAT+AGG - chr6_2:73747120-73747139 Msa0928360:CDS 10.0%
!! TATAAACACATAAATTTAAT+AGG - chr6_2:73747890-73747909 Msa0928360:intron 10.0%
!!! CAAAACATTAAAATATATTT+TGG + chr6_2:73748259-73748278 None:intergenic 10.0%
!! ACATTATTAAATCTTAAAAT+TGG - chr6_2:73748518-73748537 Msa0928360:CDS 10.0%
!!! TATTTTGACAAAAAAAAAAT+GGG + chr6_2:73749405-73749424 None:intergenic 10.0%
!!! TTATTTTGACAAAAAAAAAA+TGG + chr6_2:73749406-73749425 None:intergenic 10.0%
!! TATTGTAATGTTTAAAAAAT+CGG + chr6_2:73750429-73750448 None:intergenic 10.0%
!!! TATTCAATTTTATCTGTATT+CGG + chr6_2:73745891-73745910 None:intergenic 15.0%
!! AATTGAATAATTCATCTAAT+TGG - chr6_2:73745902-73745921 Msa0928360:CDS 15.0%
!! ATTGAATAATTCATCTAATT+GGG - chr6_2:73745903-73745922 Msa0928360:CDS 15.0%
!! TTCTTATAATAAAGGATTAA+GGG + chr6_2:73745993-73746012 None:intergenic 15.0%
!! CTAAATGTATTTATTCATAA+CGG + chr6_2:73746101-73746120 None:intergenic 15.0%
!! ATTAATAAGAGATATATTTG+AGG - chr6_2:73746156-73746175 Msa0928360:intron 15.0%
!!! TACATATAGAAATTTTTAGA+GGG - chr6_2:73746194-73746213 Msa0928360:intron 15.0%
!!! AAATTTTTAAAAATGGTCTT+AGG + chr6_2:73746292-73746311 None:intergenic 15.0%
!!! GACAAACAAATTTTTAAAAA+TGG + chr6_2:73746299-73746318 None:intergenic 15.0%
!!! CTATTTTTTAAACATAAATG+AGG + chr6_2:73746918-73746937 None:intergenic 15.0%
!! ATAAATTAATACAATTAAGG+CGG + chr6_2:73747283-73747302 None:intergenic 15.0%
!!! TATTTGTTTTCATTGAAAAA+TGG - chr6_2:73747966-73747985 Msa0928360:intron 15.0%
!! GTTATTATGATATAAAATGT+AGG - chr6_2:73750048-73750067 Msa0928360:intron 15.0%
!!! TCTTTTTTATACAAGTTTTT+TGG - chr6_2:73750673-73750692 Msa0928360:CDS 15.0%
!! AAAAAAAATAAGTGTTACAA+GGG + chr6_2:73750756-73750775 None:intergenic 15.0%
!! TAAAAAAAATAAGTGTTACA+AGG + chr6_2:73750757-73750776 None:intergenic 15.0%
!! AGTTCAATATTTCATGTAAT+TGG - chr6_2:73745718-73745737 Msa0928360:intron 20.0%
!! GTTCAATATTTCATGTAATT+GGG - chr6_2:73745719-73745738 Msa0928360:intron 20.0%
!! GTTCTTATAATAAAGGATTA+AGG + chr6_2:73745994-73746013 None:intergenic 20.0%
!! GTTAAAGGTTCTTATAATAA+AGG + chr6_2:73746001-73746020 None:intergenic 20.0%
!!! GTACATATAGAAATTTTTAG+AGG - chr6_2:73746193-73746212 Msa0928360:intron 20.0%
!!! ATTTAGGGAAAGTTAAATTT+TGG - chr6_2:73746223-73746242 Msa0928360:intron 20.0%
!! TATGGTATTAAGAAAATTGT+TGG + chr6_2:73746540-73746559 None:intergenic 20.0%
!! ATATATATAGATAGAGTTTG+TGG - chr6_2:73747015-73747034 Msa0928360:intron 20.0%
!! TCATTACATTTCTATAGTTT+AGG - chr6_2:73747074-73747093 Msa0928360:CDS 20.0%
!! CATTACATTTCTATAGTTTA+GGG - chr6_2:73747075-73747094 Msa0928360:CDS 20.0%
!! AGGATAGATAATTAAAGTTT+AGG - chr6_2:73747140-73747159 Msa0928360:CDS 20.0%
!!! CAATTTGTTTTGTTTTTGTT+TGG - chr6_2:73747429-73747448 Msa0928360:intron 20.0%
!!! TTTTGTTTTTGTTTGGTTTA+AGG - chr6_2:73747436-73747455 Msa0928360:intron 20.0%
!! ATTTAATAGGTATATGCATT+TGG - chr6_2:73747903-73747922 Msa0928360:intron 20.0%
!! TTTAATAGGTATATGCATTT+GGG - chr6_2:73747904-73747923 Msa0928360:intron 20.0%
!! TAATCTACTCAAATAACTAA+TGG + chr6_2:73748027-73748046 None:intergenic 20.0%
!! TTAGTTATTTGAGTAGATTA+TGG - chr6_2:73748027-73748046 Msa0928360:intron 20.0%
!! TAGTTATTTGAGTAGATTAT+GGG - chr6_2:73748028-73748047 Msa0928360:intron 20.0%
!! AGAATCAAATATTCAAACTT+GGG + chr6_2:73748631-73748650 None:intergenic 20.0%
!! TAGAATCAAATATTCAAACT+TGG + chr6_2:73748632-73748651 None:intergenic 20.0%
!! AAGTTTGAATATTTGATTCT+AGG - chr6_2:73748631-73748650 Msa0928360:intron 20.0%
!! TAATTAAAACATGAACACAA+TGG + chr6_2:73749103-73749122 None:intergenic 20.0%
!!! CAAACATGATTTTTTTTTTC+AGG + chr6_2:73749223-73749242 None:intergenic 20.0%
!! ACATAACGAATCATATATTT+AGG - chr6_2:73749354-73749373 Msa0928360:intron 20.0%
!! AAATGTACTAAATAGACAAT+AGG - chr6_2:73749809-73749828 Msa0928360:intron 20.0%
!! TAATGAACAAACAAACAATA+GGG + chr6_2:73749901-73749920 None:intergenic 20.0%
!! TTAATGAACAAACAAACAAT+AGG + chr6_2:73749902-73749921 None:intergenic 20.0%
!!! AATGTTTTATTTGGTTTCAT+TGG - chr6_2:73750227-73750246 Msa0928360:intron 20.0%
!! TGCATTATTTATTTATGATC+TGG + chr6_2:73750269-73750288 None:intergenic 20.0%
!!! TTTTTGTTTTTTGTTGTTGC+AGG - chr6_2:73745620-73745639 Msa0928360:intron 25.0%
! AACAAAAAAACTCACTTTGA+AGG + chr6_2:73745682-73745701 None:intergenic 25.0%
! ATGTTGTGTTTATATGTTTG+TGG - chr6_2:73745947-73745966 Msa0928360:intron 25.0%
!! ATACCTGTGATTTTTGTTAA+AGG + chr6_2:73746016-73746035 None:intergenic 25.0%
!! GGTATTAAGAAAAAGTATGT+TGG - chr6_2:73746031-73746050 Msa0928360:intron 25.0%
!!! TTTTAGAGGGTCTTATATTT+AGG - chr6_2:73746207-73746226 Msa0928360:intron 25.0%
!! TTTAGAGGGTCTTATATTTA+GGG - chr6_2:73746208-73746227 Msa0928360:intron 25.0%
! ATGCATATAGAAATTTGTAG+AGG + chr6_2:73746336-73746355 None:intergenic 25.0%
!! CAAATTGGTAATACTAATCA+GGG + chr6_2:73746377-73746396 None:intergenic 25.0%
! AGTATTACCAATTTGCAATT+TGG - chr6_2:73746382-73746401 Msa0928360:intron 25.0%
! GTATTACCAATTTGCAATTT+GGG - chr6_2:73746383-73746402 Msa0928360:intron 25.0%
!!! TGTTGATTTTTCATATTCTG+AGG + chr6_2:73746450-73746469 None:intergenic 25.0%
!! AGTACTGAAATTTGAAATGA+CGG - chr6_2:73746728-73746747 Msa0928360:intron 25.0%
! TAAATGAGGACTAATAGTTT+AGG + chr6_2:73746904-73746923 None:intergenic 25.0%
!! AAGTTTAGGAGAAAAGTTTT+AGG - chr6_2:73747154-73747173 Msa0928360:CDS 25.0%
! ACTCTTCAATAATTCATGTA+AGG - chr6_2:73747180-73747199 Msa0928360:CDS 25.0%
!! ATAATACTAGTTTGTACGAA+AGG - chr6_2:73747203-73747222 Msa0928360:CDS 25.0%
!!! AAGAGTATTGCTATTTAGTA+CGG + chr6_2:73747369-73747388 None:intergenic 25.0%
! AAACTTAAGTATCCTAAAGT+AGG - chr6_2:73747510-73747529 Msa0928360:intron 25.0%
!! TGTGTAAAGAGATTTTATAC+TGG - chr6_2:73747796-73747815 Msa0928360:intron 25.0%
! TTAAACCATTATGCAATAAG+TGG - chr6_2:73747838-73747857 Msa0928360:intron 25.0%
!!! AAAAGTGCTAATGTAAGTAT+TGG + chr6_2:73748091-73748110 None:intergenic 25.0%
! ATCAAAATAACACAACCAAA+AGG + chr6_2:73748177-73748196 None:intergenic 25.0%
! TGTATATATAGAACCAAGAA+TGG - chr6_2:73748283-73748302 Msa0928360:intron 25.0%
!! GTTTCTAGAAAAAAATCACA+GGG + chr6_2:73748324-73748343 None:intergenic 25.0%
!! AGTTTCTAGAAAAAAATCAC+AGG + chr6_2:73748325-73748344 None:intergenic 25.0%
! ATTATAATAGATAGTGAGCT+AGG - chr6_2:73748601-73748620 Msa0928360:intron 25.0%
!!! GGCATGATTTTTAAAAACTT+TGG + chr6_2:73748679-73748698 None:intergenic 25.0%
! AACAAACATTAGAGATACTT+GGG - chr6_2:73748859-73748878 Msa0928360:intron 25.0%
! AAAAAAATGGGACAACAATT+TGG + chr6_2:73749393-73749412 None:intergenic 25.0%
!! AAAGTTTAAAGTACTAAAGC+TGG + chr6_2:73749643-73749662 None:intergenic 25.0%
!! GAAAACCAATGTAATTTTGA+GGG + chr6_2:73749930-73749949 None:intergenic 25.0%
! TTAGAGAAGAATTGAACAAT+AGG + chr6_2:73749973-73749992 None:intergenic 25.0%
! ATGATATAAAATGTAGGTGA+AGG - chr6_2:73750054-73750073 Msa0928360:intron 25.0%
! TGATATAAAATGTAGGTGAA+GGG - chr6_2:73750055-73750074 Msa0928360:intron 25.0%
! ACCTCAATGACTATAAAATA+TGG - chr6_2:73750471-73750490 Msa0928360:intron 25.0%
!! ACCATATTTTATAGTCATTG+AGG + chr6_2:73750475-73750494 None:intergenic 25.0%
! ATATGGTTTATGTTTCTTGT+AGG - chr6_2:73750488-73750507 Msa0928360:CDS 25.0%
! AAAACTCACTTTGAAGGATT+TGG + chr6_2:73745676-73745695 None:intergenic 30.0%
AGTGTTAACAATTCATGTGT+TGG - chr6_2:73745792-73745811 Msa0928360:intron 30.0%
GTGTTAACAATTCATGTGTT+GGG - chr6_2:73745793-73745812 Msa0928360:intron 30.0%
GAACCTTTAACAAAAATCAC+AGG - chr6_2:73746010-73746029 Msa0928360:intron 30.0%
! TGGTAATGTGTCTCATAATT+AGG - chr6_2:73746243-73746262 Msa0928360:intron 30.0%
GGTAATGTGTCTCATAATTA+GGG - chr6_2:73746244-73746263 Msa0928360:intron 30.0%
TGTAGAGGCTCTTATATTTA+GGG + chr6_2:73746321-73746340 None:intergenic 30.0%
TTGTAGAGGCTCTTATATTT+AGG + chr6_2:73746322-73746341 None:intergenic 30.0%
! GCAAATTGGTAATACTAATC+AGG + chr6_2:73746378-73746397 None:intergenic 30.0%
!! TTTCATATTCTGAGGCAAAT+TGG + chr6_2:73746442-73746461 None:intergenic 30.0%
ACCGAGGGTAATTTATTAAT+AGG - chr6_2:73746486-73746505 Msa0928360:intron 30.0%
GCCTATTAATAAATTACCCT+CGG + chr6_2:73746490-73746509 None:intergenic 30.0%
AGGAACGTCTAACAAAAATA+TGG + chr6_2:73746558-73746577 None:intergenic 30.0%
TAGTTCATAGTGTTGTCAAA+TGG - chr6_2:73746677-73746696 Msa0928360:intron 30.0%
CAAATTTCAGTACTGTTCAA+TGG + chr6_2:73746722-73746741 None:intergenic 30.0%
TTATGCGTGAAACTTCAATT+TGG - chr6_2:73746827-73746846 Msa0928360:intron 30.0%
GAGATCAAGTACAAATAGTA+CGG + chr6_2:73746854-73746873 None:intergenic 30.0%
CTATAGTTTAGGGATCAAAT+AGG - chr6_2:73747085-73747104 Msa0928360:CDS 30.0%
GGATCAAATAGGATAGATAA+TGG - chr6_2:73747096-73747115 Msa0928360:CDS 30.0%
!! AGAGTATTGCTATTTAGTAC+GGG + chr6_2:73747368-73747387 None:intergenic 30.0%
AGCAATACTCTTCATGTAAT+TGG - chr6_2:73747377-73747396 Msa0928360:intron 30.0%
GCAATACTCTTCATGTAATT+GGG - chr6_2:73747378-73747397 Msa0928360:intron 30.0%
!! TGTTTTTGTTTGGTTTAAGG+TGG - chr6_2:73747439-73747458 Msa0928360:intron 30.0%
TTGTTCAAGTATGACATGAT+TGG + chr6_2:73747757-73747776 None:intergenic 30.0%
! TAAAGAGATTTTATACTGGC+AGG - chr6_2:73747800-73747819 Msa0928360:intron 30.0%
! AAAGAGATTTTATACTGGCA+GGG - chr6_2:73747801-73747820 Msa0928360:intron 30.0%
GATAACCACTTATTGCATAA+TGG + chr6_2:73747846-73747865 None:intergenic 30.0%
TATATGCATTTGGGTACATA+TGG - chr6_2:73747913-73747932 Msa0928360:intron 30.0%
TTGAAAAATGGAACTTGAGA+TGG - chr6_2:73747978-73747997 Msa0928360:intron 30.0%
! TTTTCCCTACATGATTTACT+TGG - chr6_2:73748351-73748370 Msa0928360:intron 30.0%
ATTGCCAAGTAAATCATGTA+GGG + chr6_2:73748358-73748377 None:intergenic 30.0%
TATTGCCAAGTAAATCATGT+AGG + chr6_2:73748359-73748378 None:intergenic 30.0%
CATGATTTACTTGGCAATAT+TGG - chr6_2:73748360-73748379 Msa0928360:intron 30.0%
! GTTCATTTGCTCTGAATTAT+TGG - chr6_2:73748387-73748406 Msa0928360:intron 30.0%
! TTTTGTTCATACCTTCCATA+TGG - chr6_2:73748420-73748439 Msa0928360:intron 30.0%
TTTGTTCATACCTTCCATAT+GGG - chr6_2:73748421-73748440 Msa0928360:intron 30.0%
!! AGTTTTGACAAAACTGTATC+TGG - chr6_2:73748458-73748477 Msa0928360:CDS 30.0%
!! GTTTTGACAAAACTGTATCT+GGG - chr6_2:73748459-73748478 Msa0928360:CDS 30.0%
! TGTCTCTAAGAAATGAGTTA+TGG - chr6_2:73748570-73748589 Msa0928360:intron 30.0%
! GTCTCTAAGAAATGAGTTAT+GGG - chr6_2:73748571-73748590 Msa0928360:intron 30.0%
!! TAATTTTTGCTGTCCTTTTC+AGG - chr6_2:73748777-73748796 Msa0928360:intron 30.0%
GCAAAATTCTTAAGAGCTAA+TGG - chr6_2:73748813-73748832 Msa0928360:intron 30.0%
GAACAAACATTAGAGATACT+TGG - chr6_2:73748858-73748877 Msa0928360:intron 30.0%
ATGAATCTAGCAGATCAATT+GGG + chr6_2:73749041-73749060 None:intergenic 30.0%
AATGAATCTAGCAGATCAAT+TGG + chr6_2:73749042-73749061 None:intergenic 30.0%
CACAAATTTCAACAACAGTT+TGG - chr6_2:73749144-73749163 Msa0928360:intron 30.0%
! AGTAATGACGTTTAAAATCG+TGG - chr6_2:73749246-73749265 Msa0928360:intron 30.0%
TGTGTTCAATGGATAACTAA+TGG - chr6_2:73749274-73749293 Msa0928360:intron 30.0%
GATTCGTTATGTTTAGTAGA+TGG + chr6_2:73749346-73749365 None:intergenic 30.0%
! TAATCTACTGGCTACTTTAA+AGG - chr6_2:73749438-73749457 Msa0928360:intron 30.0%
ATGAAACATAGACACAAACA+CGG + chr6_2:73749728-73749747 None:intergenic 30.0%
TGTTTGTGTCTATGTTTCAT+AGG - chr6_2:73749728-73749747 Msa0928360:intron 30.0%
TCATAGGAAATGTATATCTC+AGG - chr6_2:73749744-73749763 Msa0928360:intron 30.0%
TGTACTAAATAGACAATAGG+AGG - chr6_2:73749812-73749831 Msa0928360:intron 30.0%
! CGAAAACCAATGTAATTTTG+AGG + chr6_2:73749931-73749950 None:intergenic 30.0%
GATATAAAATGTAGGTGAAG+GGG - chr6_2:73750056-73750075 Msa0928360:intron 30.0%
CTCATTTACTTCTTGGAATT+TGG - chr6_2:73750091-73750110 Msa0928360:intron 30.0%
AATTTGGTCACAAGAAGAAT+CGG - chr6_2:73750107-73750126 Msa0928360:intron 30.0%
! GTATAGTCAATTTTCTCTAG+AGG + chr6_2:73750585-73750604 None:intergenic 30.0%
TTGACATGGAAATCTAAAGA+GGG + chr6_2:73750611-73750630 None:intergenic 30.0%
TTTGACATGGAAATCTAAAG+AGG + chr6_2:73750612-73750631 None:intergenic 30.0%
TAGTACAACAGTATTTGACA+TGG + chr6_2:73750625-73750644 None:intergenic 30.0%
! AAGAAGAGAGTGTGAAGAAA+AGG + chr6_2:73745347-73745366 None:intergenic 35.0%
! TTAGAGAGAGAGTACATGAT+TGG + chr6_2:73745426-73745445 None:intergenic 35.0%
! CCTCTCTTCAATTTTCTTCT+GGG - chr6_2:73745557-73745576 Msa0928360:intron 35.0%
! TCTTCAATTTTCTTCTGGGT+CGG - chr6_2:73745561-73745580 Msa0928360:intron 35.0%
!! GAAGGATTTGGAGTTTTCTT+GGG + chr6_2:73745664-73745683 None:intergenic 35.0%
!! TGAAGGATTTGGAGTTTTCT+TGG + chr6_2:73745665-73745684 None:intergenic 35.0%
AACTAATCCGGTAAACTTAG+CGG + chr6_2:73745858-73745877 None:intergenic 35.0%
!! AATTGGGTTGTTGTGTTTTG+TGG - chr6_2:73745919-73745938 Msa0928360:CDS 35.0%
ATGTGTCTCATAATTAGGGA+TGG - chr6_2:73746248-73746267 Msa0928360:intron 35.0%
! AAAAATGGTCTTAGGACAAC+AGG + chr6_2:73746284-73746303 None:intergenic 35.0%
TTACCAATTTGCAATTTGGG+TGG - chr6_2:73746386-73746405 Msa0928360:intron 35.0%
TACCAATTTGCAATTTGGGT+GGG - chr6_2:73746387-73746406 Msa0928360:intron 35.0%
ATGAATGCATTTATTCACCG+AGG - chr6_2:73746470-73746489 Msa0928360:intron 35.0%
TGAATGCATTTATTCACCGA+GGG - chr6_2:73746471-73746490 Msa0928360:intron 35.0%
TTCATAGTGTTGTCAAATGG+TGG - chr6_2:73746680-73746699 Msa0928360:intron 35.0%
AATACAATTAAGGCGGTTAG+CGG + chr6_2:73747276-73747295 None:intergenic 35.0%
! TTTGTTTGGTTTAAGGTGGT+CGG - chr6_2:73747443-73747462 Msa0928360:intron 35.0%
! TATAAAGGCATATGCAATGG+CGG - chr6_2:73747473-73747492 Msa0928360:intron 35.0%
!!! CTCATGGGGATTTTAATTGA+AGG - chr6_2:73747546-73747565 Msa0928360:intron 35.0%
! AATGCATTTCTCTTTTCGCA+TGG - chr6_2:73747628-73747647 Msa0928360:intron 35.0%
! AACTTTTCCAAGATAGTGCT+TGG - chr6_2:73747671-73747690 Msa0928360:intron 35.0%
! AAGGTGCTTAATCGCATTTA+GGG + chr6_2:73748158-73748177 None:intergenic 35.0%
!! AAAGGTGCTTAATCGCATTT+AGG + chr6_2:73748159-73748178 None:intergenic 35.0%
! AAATGCGATTAAGCACCTTT+TGG - chr6_2:73748159-73748178 Msa0928360:intron 35.0%
CTTATAACAAATGATGCCAG+TGG + chr6_2:73748209-73748228 None:intergenic 35.0%
TTATAAGTTCGTTTCCGATC+CGG - chr6_2:73748222-73748241 Msa0928360:intron 35.0%
AGTCTTTCTACATCCATTCT+TGG + chr6_2:73748299-73748318 None:intergenic 35.0%
! CATTTGCTCTGAATTATTGG+TGG - chr6_2:73748390-73748409 Msa0928360:intron 35.0%
GTCAAAACTCAAGAACATCT+TGG + chr6_2:73748447-73748466 None:intergenic 35.0%
TTAAAATTGGATGCGTAGAC+CGG - chr6_2:73748531-73748550 Msa0928360:CDS 35.0%
CCAAGATCCTTCCATTTATT+CGG - chr6_2:73748697-73748716 Msa0928360:intron 35.0%
ACAACTTCCTTCCGAATAAA+TGG + chr6_2:73748711-73748730 None:intergenic 35.0%
!!! AAGGAAGTTGTGTTGTTTTC+AGG - chr6_2:73748720-73748739 Msa0928360:intron 35.0%
!!! AGTTGTGTTGTTTTCAGGTT+TGG - chr6_2:73748725-73748744 Msa0928360:intron 35.0%
ATCAAATGCTGAACAACGTA+TGG + chr6_2:73748757-73748776 None:intergenic 35.0%
AGCTTTACTTGTTCCTGAAA+AGG + chr6_2:73748793-73748812 None:intergenic 35.0%
CTTAATGAGACATCAAAGTC+AGG - chr6_2:73748957-73748976 Msa0928360:intron 35.0%
AAGTCAGGTATGGATGATTT+AGG - chr6_2:73748972-73748991 Msa0928360:intron 35.0%
TAGCAGATCAATTGGGAAAA+TGG + chr6_2:73749034-73749053 None:intergenic 35.0%
TGCTAGATTCATTGTTCTGT+TGG - chr6_2:73749049-73749068 Msa0928360:intron 35.0%
TAGATTCATTGTTCTGTTGG+TGG - chr6_2:73749052-73749071 Msa0928360:intron 35.0%
CACAACGCTAATTAATCTAC+TGG - chr6_2:73749426-73749445 Msa0928360:intron 35.0%
! CAACCATTTTCTAACAGATC+AGG + chr6_2:73749523-73749542 None:intergenic 35.0%
CTCAATAAGGAGTGAAAATC+AGG - chr6_2:73749591-73749610 Msa0928360:intron 35.0%
ACTCAAGTAGACTATCAACA+TGG + chr6_2:73749676-73749695 None:intergenic 35.0%
TGTATATCTCAGGAGATAGT+AGG - chr6_2:73749754-73749773 Msa0928360:intron 35.0%
TTCCTCCCTCAAAATTACAT+TGG - chr6_2:73749922-73749941 Msa0928360:intron 35.0%
!! AACCAATGTAATTTTGAGGG+AGG + chr6_2:73749927-73749946 None:intergenic 35.0%
AACGTGACTCATTTACTTCT+TGG - chr6_2:73750084-73750103 Msa0928360:intron 35.0%
!! TGCTGTTTCAGCAATTTCTT+TGG + chr6_2:73750178-73750197 None:intergenic 35.0%
GATAACCGGAATCAAACTAA+CGG - chr6_2:73750356-73750375 Msa0928360:CDS 35.0%
TTATGTTTCTTGTAGGCTAG+TGG - chr6_2:73750495-73750514 Msa0928360:CDS 35.0%
! AAGCAAGCGTAAGAATTTTC+CGG - chr6_2:73750540-73750559 Msa0928360:CDS 35.0%
TGTTACAAGGGAAAAACAGA+AGG + chr6_2:73750744-73750763 None:intergenic 35.0%
! AAGAGAGAGAGAGAGGTTTT+GGG + chr6_2:73745302-73745321 None:intergenic 40.0%
! AAAGAGAGAGAGAGAGGTTT+TGG + chr6_2:73745303-73745322 None:intergenic 40.0%
TTGAAGAAAGAGAGAGAGAG+AGG + chr6_2:73745309-73745328 None:intergenic 40.0%
CTCTCTCTCTCTTTCTTCAA+TGG - chr6_2:73745309-73745328 Msa0928360:three_prime_UTR 40.0%
GTGTGAAGAAAAGGTTGGAA+TGG + chr6_2:73745338-73745357 None:intergenic 40.0%
! AGAGAGTGTGAAGAAAAGGT+TGG + chr6_2:73745343-73745362 None:intergenic 40.0%
! AGTACATGATTGGTTGTTGG+TGG + chr6_2:73745416-73745435 None:intergenic 40.0%
! GAGAGTACATGATTGGTTGT+TGG + chr6_2:73745419-73745438 None:intergenic 40.0%
CTCTCTCTAACTTCTCTCTT+TGG - chr6_2:73745436-73745455 Msa0928360:three_prime_UTR 40.0%
! CGGAAGTTTGTGATGGAAAT+GGG + chr6_2:73745484-73745503 None:intergenic 40.0%
! ACGGAAGTTTGTGATGGAAA+TGG + chr6_2:73745485-73745504 None:intergenic 40.0%
TGAAGAGAGGCAAGAACTTA+CGG + chr6_2:73745547-73745566 None:intergenic 40.0%
! GCCTCTCTTCAATTTTCTTC+TGG - chr6_2:73745556-73745575 Msa0928360:intron 40.0%
CCCAGAAGAAAATTGAAGAG+AGG + chr6_2:73745560-73745579 None:intergenic 40.0%
ACTAATCCGGTAAACTTAGC+GGG + chr6_2:73745857-73745876 None:intergenic 40.0%
!! GCTAAGTTTACCGGATTAGT+TGG - chr6_2:73745857-73745876 Msa0928360:CDS 40.0%
TGTCTCATAATTAGGGATGG+AGG - chr6_2:73746251-73746270 Msa0928360:intron 40.0%
GTCTCATAATTAGGGATGGA+GGG - chr6_2:73746252-73746271 Msa0928360:intron 40.0%
TGTTAGACGTTCCTGTAGTA+AGG - chr6_2:73746564-73746583 Msa0928360:intron 40.0%
GTTAGACGTTCCTGTAGTAA+GGG - chr6_2:73746565-73746584 Msa0928360:intron 40.0%
ACTGTTATAGCCGAGCTATA+CGG - chr6_2:73746600-73746619 Msa0928360:intron 40.0%
!! TTGTCAAATGGTGGCTTTAG+CGG - chr6_2:73746689-73746708 Msa0928360:intron 40.0%
! AGTGTTATTCTTCGCTTTCG+TGG + chr6_2:73747235-73747254 None:intergenic 40.0%
! GGCTATAAAGGCATATGCAA+TGG - chr6_2:73747470-73747489 Msa0928360:intron 40.0%
TCTTAAGCCAAGCACTATCT+TGG + chr6_2:73747681-73747700 None:intergenic 40.0%
AGGTGCTTAATCGCATTTAG+GGG + chr6_2:73748157-73748176 None:intergenic 40.0%
! TTTTGATATGCACCATCCAC+TGG - chr6_2:73748190-73748209 Msa0928360:intron 40.0%
TAACAAATGATGCCAGTGGA+TGG + chr6_2:73748205-73748224 None:intergenic 40.0%
!!! TATTTTGGCTTGCTTACGTC+CGG + chr6_2:73748244-73748263 None:intergenic 40.0%
!! ACAACAGTGTTGACACTTTC+CGG + chr6_2:73748553-73748572 None:intergenic 40.0%
CCGAATAAATGGAAGGATCT+TGG + chr6_2:73748700-73748719 None:intergenic 40.0%
GATCCTTCCATTTATTCGGA+AGG - chr6_2:73748701-73748720 Msa0928360:intron 40.0%
CTTCCTTCCGAATAAATGGA+AGG + chr6_2:73748707-73748726 None:intergenic 40.0%
AATGCTGAACAACGTATGGA+AGG + chr6_2:73748753-73748772 None:intergenic 40.0%
AGATACTTGGGAAATCTGAC+TGG - chr6_2:73748871-73748890 Msa0928360:intron 40.0%
!! CAGTCAAAGAAAGTACCACA+GGG + chr6_2:73748908-73748927 None:intergenic 40.0%
!! TCAGTCAAAGAAAGTACCAC+AGG + chr6_2:73748909-73748928 None:intergenic 40.0%
ACTTCATAAAGCCCTCGATT+GGG - chr6_2:73748932-73748951 Msa0928360:intron 40.0%
TGAGACATCAAAGTCAGGTA+TGG - chr6_2:73748962-73748981 Msa0928360:intron 40.0%
ATCAATTGGGAAAATGGCAG+GGG + chr6_2:73749028-73749047 None:intergenic 40.0%
GATCAATTGGGAAAATGGCA+GGG + chr6_2:73749029-73749048 None:intergenic 40.0%
AGATCAATTGGGAAAATGGC+AGG + chr6_2:73749030-73749049 None:intergenic 40.0%
!! TTCATTGTTCTGTTGGTGGT+AGG - chr6_2:73749056-73749075 Msa0928360:intron 40.0%
!! TCATTGTTCTGTTGGTGGTA+GGG - chr6_2:73749057-73749076 Msa0928360:intron 40.0%
AACAACAGTTTGGATGATGC+AGG - chr6_2:73749154-73749173 Msa0928360:intron 40.0%
TCGTGGTTAAGTGTGTTCAA+TGG - chr6_2:73749263-73749282 Msa0928360:intron 40.0%
GTGCCTGATCTGTTAGAAAA+TGG - chr6_2:73749517-73749536 Msa0928360:intron 40.0%
TTTCACTCCTTATTGAGCAG+CGG + chr6_2:73749588-73749607 None:intergenic 40.0%
TCTAGTGAGCTAGTTGAATG+TGG - chr6_2:73749848-73749867 Msa0928360:intron 40.0%
CTAGTGAGCTAGTTGAATGT+GGG - chr6_2:73749849-73749868 Msa0928360:intron 40.0%
GAAAATGTTTGAACCTACCG+TGG - chr6_2:73750295-73750314 Msa0928360:intron 40.0%
TCATGAAGTCCGGTTGAATT+TGG + chr6_2:73750338-73750357 None:intergenic 40.0%
ATTCCGGTTATCATGAAGTC+CGG + chr6_2:73750348-73750367 None:intergenic 40.0%
! ATAGTCATTGAGGTGTCAGT+CGG + chr6_2:73750465-73750484 None:intergenic 40.0%
AGGCTAGTGGTGATATTGAT+TGG - chr6_2:73750508-73750527 Msa0928360:CDS 40.0%
! AGCAAGCGTAAGAATTTTCC+GGG - chr6_2:73750541-73750560 Msa0928360:CDS 40.0%
AACTTGTATCGCTTTATCCC+CGG + chr6_2:73750562-73750581 None:intergenic 40.0%
! TTTTCGCAGTAGTGTGATTG+TGG - chr6_2:73750700-73750719 Msa0928360:five_prime_UTR 40.0%
! AGAGAGAGAGAGAGGTTTTG+GGG + chr6_2:73745301-73745320 None:intergenic 45.0%
!! AGTGTGTTGGTGTTGGTGTT+GGG + chr6_2:73745376-73745395 None:intergenic 45.0%
! TGTTGGTGGAGAATGAACGA+GGG + chr6_2:73745402-73745421 None:intergenic 45.0%
! TTGTTGGTGGAGAATGAACG+AGG + chr6_2:73745403-73745422 None:intergenic 45.0%
! TTGTGATGGAAATGGGTCGT+TGG + chr6_2:73745477-73745496 None:intergenic 45.0%
GAAGAGAGGCAAGAACTTAC+GGG + chr6_2:73745546-73745565 None:intergenic 45.0%
TGTTGCAGGAATCCACAATC+TGG - chr6_2:73745634-73745653 Msa0928360:intron 45.0%
TTCTTGGGTTCACCAGATTG+TGG + chr6_2:73745649-73745668 None:intergenic 45.0%
TTATGACTGTGCTCCTCTCA+AGG - chr6_2:73745750-73745769 Msa0928360:intron 45.0%
!! TGTGTTGGGTTAGTCCATAC+AGG - chr6_2:73745807-73745826 Msa0928360:intron 45.0%
!! GTGTTGGGTTAGTCCATACA+GGG - chr6_2:73745808-73745827 Msa0928360:intron 45.0%
CTAATCCGGTAAACTTAGCG+GGG + chr6_2:73745856-73745875 None:intergenic 45.0%
GGCTCAAGTACCAACTAATC+CGG + chr6_2:73745870-73745889 None:intergenic 45.0%
AGCCCACCCAAATTGCAAAT+TGG + chr6_2:73746392-73746411 None:intergenic 45.0%
TTCCTGTAGTAAGGGATGGA+GGG - chr6_2:73746573-73746592 Msa0928360:intron 45.0%
AAACCTGTAGCCGTATAGCT+CGG + chr6_2:73746613-73746632 None:intergenic 45.0%
AGAGCTTCGGTTCCTACTTT+AGG + chr6_2:73747525-73747544 None:intergenic 45.0%
AATCCCCATGAGAAGAGCTT+CGG + chr6_2:73747538-73747557 None:intergenic 45.0%
! AATCGCATTTAGGGGGCATA+TGG + chr6_2:73748149-73748168 None:intergenic 45.0%
GGTGCTTAATCGCATTTAGG+GGG + chr6_2:73748156-73748175 None:intergenic 45.0%
AACATCTTGGCCCATATGGA+AGG + chr6_2:73748434-73748453 None:intergenic 45.0%
CAAGAACATCTTGGCCCATA+TGG + chr6_2:73748438-73748457 None:intergenic 45.0%
! CAATCGAGGGCTTTATGAAG+TGG + chr6_2:73748933-73748952 None:intergenic 45.0%
CACTTCATAAAGCCCTCGAT+TGG - chr6_2:73748931-73748950 Msa0928360:intron 45.0%
CTCATTAAGTGCCCAATCGA+GGG + chr6_2:73748946-73748965 None:intergenic 45.0%
TCTCATTAAGTGCCCAATCG+AGG + chr6_2:73748947-73748966 None:intergenic 45.0%
TCAATTGGGAAAATGGCAGG+GGG + chr6_2:73749027-73749046 None:intergenic 45.0%
TTATTCCCCGCTGCTCAATA+AGG - chr6_2:73749578-73749597 Msa0928360:intron 45.0%
TTCACTCCTTATTGAGCAGC+GGG + chr6_2:73749587-73749606 None:intergenic 45.0%
CACGGACAGTAAACAAACTG+AGG + chr6_2:73749710-73749729 None:intergenic 45.0%
GTTGAATGTGGGAGACTTTC+AGG - chr6_2:73749860-73749879 Msa0928360:intron 45.0%
! CGAAAGGTCTTGTCTGCTTT+AGG - chr6_2:73750135-73750154 Msa0928360:intron 45.0%
!! CGGTTGAATTTGGCTTGAAC+CGG + chr6_2:73750328-73750347 None:intergenic 45.0%
CGGTTCAAGCCAAATTCAAC+CGG - chr6_2:73750326-73750345 Msa0928360:intron 45.0%
CAACCGGACTTCATGATAAC+CGG - chr6_2:73750342-73750361 Msa0928360:CDS 45.0%
! GTTCGCCGTTAGTTTGATTC+CGG + chr6_2:73750364-73750383 None:intergenic 45.0%
TGTCCTATTCCCGGTTCTAT+CGG - chr6_2:73750384-73750403 Msa0928360:intron 45.0%
CTAGTTCAACCGATAGAACC+GGG + chr6_2:73750396-73750415 None:intergenic 45.0%
GCTAGTTCAACCGATAGAAC+CGG + chr6_2:73750397-73750416 None:intergenic 45.0%
! GTTCTATCGGTTGAACTAGC+TGG - chr6_2:73750397-73750416 Msa0928360:intron 45.0%
! GCAAGCGTAAGAATTTTCCG+GGG - chr6_2:73750542-73750561 Msa0928360:CDS 45.0%
!! ATAATAAATTAATACAATTA+AGG + chr6_2:73747286-73747305 None:intergenic 5.0%
!!! AGAGAGAGAGAGGTTTTGGG+GGG + chr6_2:73745299-73745318 None:intergenic 50.0%
!! GAGAGAGAGAGAGGTTTTGG+GGG + chr6_2:73745300-73745319 None:intergenic 50.0%
!! GAGTGTGTTGGTGTTGGTGT+TGG + chr6_2:73745377-73745396 None:intergenic 50.0%
! AGGGAAGAGTGTGTTGGTGT+TGG + chr6_2:73745383-73745402 None:intergenic 50.0%
! TGAACGAGGGAAGAGTGTGT+TGG + chr6_2:73745389-73745408 None:intergenic 50.0%
AGTGGCACGGAAGTTTGTGA+TGG + chr6_2:73745491-73745510 None:intergenic 50.0%
!! CTTCCGTGCCACTTCAGAAA+CGG - chr6_2:73745498-73745517 Msa0928360:intron 50.0%
! AAACGGCACCGTTTCTGAAG+TGG + chr6_2:73745509-73745528 None:intergenic 50.0%
GGGTCAGTGGGGAGATTAAA+CGG + chr6_2:73745526-73745545 None:intergenic 50.0%
CAAGAACTTACGGGTCAGTG+GGG + chr6_2:73745537-73745556 None:intergenic 50.0%
GCAAGAACTTACGGGTCAGT+GGG + chr6_2:73745538-73745557 None:intergenic 50.0%
ATCGAACCTGAGACCTTGAG+AGG + chr6_2:73745766-73745785 None:intergenic 50.0%
AGCTGGAGAAAAGCCCTGTA+TGG + chr6_2:73745824-73745843 None:intergenic 50.0%
TTGAGCCCCGCTAAGTTTAC+CGG - chr6_2:73745848-73745867 Msa0928360:CDS 50.0%
GACGTTCCTGTAGTAAGGGA+TGG - chr6_2:73746569-73746588 Msa0928360:intron 50.0%
GTTCCTGTAGTAAGGGATGG+AGG - chr6_2:73746572-73746591 Msa0928360:intron 50.0%
AGGCGGTTAGCGGAAATCAT+GGG + chr6_2:73747266-73747285 None:intergenic 50.0%
AAGGCGGTTAGCGGAAATCA+TGG + chr6_2:73747267-73747286 None:intergenic 50.0%
GCACTGTATCGTGTCTTTCG+TGG - chr6_2:73747334-73747353 Msa0928360:intron 50.0%
! TTGGTTTAAGGTGGTCGGCA+AGG - chr6_2:73747448-73747467 Msa0928360:intron 50.0%
! TGGTTTAAGGTGGTCGGCAA+GGG - chr6_2:73747449-73747468 Msa0928360:intron 50.0%
! CAATGGCGGAGTTGGAAACA+AGG - chr6_2:73747487-73747506 Msa0928360:intron 50.0%
AGGAACCGAAGCTCTTCTCA+TGG - chr6_2:73747530-73747549 Msa0928360:intron 50.0%
GGAACCGAAGCTCTTCTCAT+GGG - chr6_2:73747531-73747550 Msa0928360:intron 50.0%
GAACCGAAGCTCTTCTCATG+GGG - chr6_2:73747532-73747551 Msa0928360:intron 50.0%
!! CAAAGAAAGTACCACAGGGC+TGG + chr6_2:73748904-73748923 None:intergenic 50.0%
TCACTCCTTATTGAGCAGCG+GGG + chr6_2:73749586-73749605 None:intergenic 50.0%
TGGTCACAAGAAGAATCGGC+AGG - chr6_2:73750111-73750130 Msa0928360:intron 50.0%
AGAAGAATCGGCAGGTCGAA+AGG - chr6_2:73750119-73750138 Msa0928360:intron 50.0%
AACCTACCGTGGTTCAACTC+CGG - chr6_2:73750306-73750325 Msa0928360:intron 50.0%
CTTGAACCGGAGTTGAACCA+CGG + chr6_2:73750315-73750334 None:intergenic 50.0%
CAACCGATAGAACCGGGAAT+AGG + chr6_2:73750390-73750409 None:intergenic 50.0%
!! GGTGCGCTTTTGGGTGAGTT+TGG + chr6_2:73745278-73745297 None:intergenic 55.0%
!!! GTTTTGGGGGGTGCGCTTTT+GGG + chr6_2:73745287-73745306 None:intergenic 55.0%
!! GCACCGTTTCTGAAGTGGCA+CGG + chr6_2:73745504-73745523 None:intergenic 55.0%
GGCAAGAACTTACGGGTCAG+TGG + chr6_2:73745539-73745558 None:intergenic 55.0%
TGTGCTCCTCTCAAGGTCTC+AGG - chr6_2:73745757-73745776 Msa0928360:intron 55.0%
TAGCGGGGCTCAATTGAAGC+TGG + chr6_2:73745841-73745860 None:intergenic 55.0%
CTCCCTCCATCCCTTACTAC+AGG + chr6_2:73746578-73746597 None:intergenic 55.0%
TAGCCGAGCTATACGGCTAC+AGG - chr6_2:73746607-73746626 Msa0928360:intron 55.0%
GTGGTCGGCAAGGGCTATAA+AGG - chr6_2:73747458-73747477 Msa0928360:intron 55.0%
! GGCATATGCAATGGCGGAGT+TGG - chr6_2:73747479-73747498 Msa0928360:intron 55.0%
!! TGGCTTGCTTACGTCCGGAT+CGG + chr6_2:73748239-73748258 None:intergenic 55.0%
AACCGGAGTTGAACCACGGT+AGG + chr6_2:73750311-73750330 None:intergenic 55.0%
ACGGCGAACTGTCCTATTCC+CGG - chr6_2:73750375-73750394 Msa0928360:intron 55.0%
!!! GGTTTTGGGGGGTGCGCTTT+TGG + chr6_2:73745288-73745307 None:intergenic 60.0%
CTGGTACTACTCCAGCCCTG+TGG - chr6_2:73748890-73748909 Msa0928360:intron 60.0%
Chromosome Type Strat End Strand Name
chr6_2 gene 73745225 73750797 73745225 ID=Msa0928360;Name=Msa0928360
chr6_2 mRNA 73745225 73750797 73745225 ID=Msa0928360-mRNA-1;Parent=Msa0928360;Name=Msa0928360-mRNA-1;_AED=0.01;_eAED=0.01;_QI=103|1|1|1|1|1|6|246|240
chr6_2 exon 73745225 73745512 73745225 ID=Msa0928360-mRNA-1:exon:12555;Parent=Msa0928360-mRNA-1
chr6_2 exon 73745825 73745952 73745825 ID=Msa0928360-mRNA-1:exon:12554;Parent=Msa0928360-mRNA-1
chr6_2 exon 73747044 73747223 73747044 ID=Msa0928360-mRNA-1:exon:12553;Parent=Msa0928360-mRNA-1
chr6_2 exon 73748455 73748564 73748455 ID=Msa0928360-mRNA-1:exon:12552;Parent=Msa0928360-mRNA-1
chr6_2 exon 73750336 73750380 73750336 ID=Msa0928360-mRNA-1:exon:12551;Parent=Msa0928360-mRNA-1
chr6_2 exon 73750477 73750797 73750477 ID=Msa0928360-mRNA-1:exon:12550;Parent=Msa0928360-mRNA-1
chr6_2 five_prime_UTR 73750695 73750797 73750695 ID=Msa0928360-mRNA-1:five_prime_utr;Parent=Msa0928360-mRNA-1
chr6_2 CDS 73750477 73750694 73750477 ID=Msa0928360-mRNA-1:cds;Parent=Msa0928360-mRNA-1
chr6_2 CDS 73750336 73750380 73750336 ID=Msa0928360-mRNA-1:cds;Parent=Msa0928360-mRNA-1
chr6_2 CDS 73748455 73748564 73748455 ID=Msa0928360-mRNA-1:cds;Parent=Msa0928360-mRNA-1
chr6_2 CDS 73747044 73747223 73747044 ID=Msa0928360-mRNA-1:cds;Parent=Msa0928360-mRNA-1
chr6_2 CDS 73745825 73745952 73745825 ID=Msa0928360-mRNA-1:cds;Parent=Msa0928360-mRNA-1
chr6_2 CDS 73745471 73745512 73745471 ID=Msa0928360-mRNA-1:cds;Parent=Msa0928360-mRNA-1
chr6_2 three_prime_UTR 73745225 73745470 73745225 ID=Msa0928360-mRNA-1:three_prime_utr;Parent=Msa0928360-mRNA-1
Gene Sequence

>Msa0928360

ATGGCTTCCATTCCAACCTTTTCTTCACACTCTCTTCTTCTCAAACCCAACACCAACACCAACACACTCTTCCCTCGTTCATTCTCCACCAACAACCAATCATGTACTCTCTCTCTAACTTCTCTCTTTGGAACAAAATTCACTCTCCAACGACCCATTTCCATCACAAACTTCCGTGCCACTTCAGAAACGGTGCCGTTTAATCTCCCCACTGACCCGAATCCACAATCTGGTGAACCCAAGAAAACTCCAAATCCTTCAAAGTGGTCGGCAAGGGCTATAAAGGCATATGCAATGGCGGAGTTGGAAACAAGGAAACTTAAGTATCCTAAAGTAGGAACCGAAGCTCTTCTCATGGGGATTTTAATTGAAGGAACAAGTAAAGCTGCAAAATTCTTAAGAGCTAATGGAATTACTTATCTGAAAGTACGCGAACAAACATTAGAGATACTTGGGAAATCTGACTGGTACTACTCCAGCCCTGTGGTACTTTCTTTGACTGAACCACTTCATAAAGCCCTCGATTGGGCACTTAATGAGACATCAAAGTCAGGTGAAGGGGAAACAAACGTGACTCATTTACTTCTTGGAATTTGGTCACAAGAAGAATCGGCAGGTCGAAAGGTCTTGTCTGCTTTAGGTTTCAACGATGAAAAAGCCAAAGAAATTGCTGAAACAGCAGCTAGTGGTGATATTGATTGGAGTTTCAAGAAGCAAGCGTAA

Protein sequence

>Msa0928360

MASIPTFSSHSLLLKPNTNTNTLFPRSFSTNNQSCTLSLTSLFGTKFTLQRPISITNFRATSETVPFNLPTDPNPQSGEPKKTPNPSKWSARAIKAYAMAELETRKLKYPKVGTEALLMGILIEGTSKAAKFLRANGITYLKVREQTLEILGKSDWYYSSPVVLSLTEPLHKALDWALNETSKSGEGETNVTHLLLGIWSQEESAGRKVLSALGFNDEKAKEIAETAASGDIDWSFKKQA*